From 6f13ea2e99ba13bae9b7c08d7c8a18695d031af2 Mon Sep 17 00:00:00 2001 From: "Documenter.jl" Date: Wed, 29 Nov 2023 01:35:56 +0000 Subject: [PATCH] build based on fd3587a --- stable | 2 +- v1 | 2 +- v1.2 | 2 +- v1.2.2/.documenter-siteinfo.json | 1 + v1.2.2/adjacency/index.html | 58 ++ v1.2.2/allindex/index.html | 2 + v1.2.2/arraytools/index.html | 4 + v1.2.2/assembly/index.html | 2 + v1.2.2/assets/documenter.js | 889 ++++++++++++++++++ v1.2.2/assets/themes/documenter-dark.css | 7 + v1.2.2/assets/themes/documenter-light.css | 9 + v1.2.2/assets/themeswap.js | 84 ++ v1.2.2/assets/warner.js | 52 + v1.2.2/cellfinder/index.html | 2 + v1.2.2/coordinatesystem/index.html | 12 + v1.2.2/elementgeometry/index.html | 33 + v1.2.2/extendablegrid/index.html | 120 +++ v1.2.2/gmsh/index.html | 2 + v1.2.2/gridconstructors/index.html | 15 + v1.2.2/index.html | 2 + v1.2.2/more/index.html | 3 + v1.2.2/refinement/index.html | 17 + v1.2.2/regionedit/index.html | 25 + v1.2.2/script_examples/cross3d.svg | 9 + v1.2.2/script_examples/examples1d.jl | 69 ++ v1.2.2/script_examples/examples1d/index.html | 40 + v1.2.2/script_examples/examples2d.jl | 131 +++ v1.2.2/script_examples/examples2d/index.html | 91 ++ v1.2.2/script_examples/examples3d.jl | 60 ++ v1.2.2/script_examples/examples3d/index.html | 43 + v1.2.2/script_examples/gmsh.jl | 317 +++++++ v1.2.2/script_examples/gmsh/index.html | 288 ++++++ v1.2.2/script_examples/gmsh_t1.svg | 9 + v1.2.2/script_examples/gmsh_t4.svg | 9 + v1.2.2/script_examples/gmsh_t5.svg | 9 + .../script_examples/interval_from_vector.svg | 184 ++++ v1.2.2/script_examples/interval_localref.svg | 196 ++++ .../script_examples/interval_multiregion.svg | 255 +++++ v1.2.2/script_examples/interval_subgrid.svg | 284 ++++++ v1.2.2/script_examples/quadrilateral.svg | 9 + .../rect2d_bregion_function.svg | 9 + v1.2.2/script_examples/rectangle.svg | 9 + v1.2.2/script_examples/rectangle_localref.svg | 9 + .../script_examples/rectangle_multiregion.svg | 9 + v1.2.2/script_examples/rectangle_subgrid.svg | 9 + v1.2.2/script_examples/sorted_subgrid.svg | 9 + v1.2.2/search_index.js | 3 + v1.2.2/shape_specs/index.html | 43 + v1.2.2/siteinfo.js | 1 + v1.2.2/subgrid/index.html | 32 + v1.2.2/tdict/index.html | 2 + v1.2.2/tokenstream/index.html | 11 + v1.2.2/typehierarchy/index.html | 112 +++ v1.2.2/vectorofconstants/index.html | 11 + v1.2.2/voronoi/index.html | 3 + versions.js | 2 +- 56 files changed, 3618 insertions(+), 4 deletions(-) create mode 100644 v1.2.2/.documenter-siteinfo.json create mode 100644 v1.2.2/adjacency/index.html create mode 100644 v1.2.2/allindex/index.html create mode 100644 v1.2.2/arraytools/index.html create mode 100644 v1.2.2/assembly/index.html create mode 100644 v1.2.2/assets/documenter.js create mode 100644 v1.2.2/assets/themes/documenter-dark.css create mode 100644 v1.2.2/assets/themes/documenter-light.css create mode 100644 v1.2.2/assets/themeswap.js create mode 100644 v1.2.2/assets/warner.js create mode 100644 v1.2.2/cellfinder/index.html create mode 100644 v1.2.2/coordinatesystem/index.html create mode 100644 v1.2.2/elementgeometry/index.html create mode 100644 v1.2.2/extendablegrid/index.html create mode 100644 v1.2.2/gmsh/index.html create mode 100644 v1.2.2/gridconstructors/index.html create mode 100644 v1.2.2/index.html create mode 100644 v1.2.2/more/index.html create mode 100644 v1.2.2/refinement/index.html create mode 100644 v1.2.2/regionedit/index.html create mode 100644 v1.2.2/script_examples/cross3d.svg create mode 100644 v1.2.2/script_examples/examples1d.jl create mode 100644 v1.2.2/script_examples/examples1d/index.html create mode 100644 v1.2.2/script_examples/examples2d.jl create mode 100644 v1.2.2/script_examples/examples2d/index.html create mode 100644 v1.2.2/script_examples/examples3d.jl create mode 100644 v1.2.2/script_examples/examples3d/index.html create mode 100644 v1.2.2/script_examples/gmsh.jl create mode 100644 v1.2.2/script_examples/gmsh/index.html create mode 100644 v1.2.2/script_examples/gmsh_t1.svg create mode 100644 v1.2.2/script_examples/gmsh_t4.svg create mode 100644 v1.2.2/script_examples/gmsh_t5.svg create mode 100644 v1.2.2/script_examples/interval_from_vector.svg create mode 100644 v1.2.2/script_examples/interval_localref.svg create mode 100644 v1.2.2/script_examples/interval_multiregion.svg create mode 100644 v1.2.2/script_examples/interval_subgrid.svg create mode 100644 v1.2.2/script_examples/quadrilateral.svg create mode 100644 v1.2.2/script_examples/rect2d_bregion_function.svg create mode 100644 v1.2.2/script_examples/rectangle.svg create mode 100644 v1.2.2/script_examples/rectangle_localref.svg create mode 100644 v1.2.2/script_examples/rectangle_multiregion.svg create mode 100644 v1.2.2/script_examples/rectangle_subgrid.svg create mode 100644 v1.2.2/script_examples/sorted_subgrid.svg create mode 100644 v1.2.2/search_index.js create mode 100644 v1.2.2/shape_specs/index.html create mode 100644 v1.2.2/siteinfo.js create mode 100644 v1.2.2/subgrid/index.html create mode 100644 v1.2.2/tdict/index.html create mode 100644 v1.2.2/tokenstream/index.html create mode 100644 v1.2.2/typehierarchy/index.html create mode 100644 v1.2.2/vectorofconstants/index.html create mode 100644 v1.2.2/voronoi/index.html diff --git a/stable b/stable index 24e56e03..06043b8e 120000 --- a/stable +++ b/stable @@ -1 +1 @@ -v1.2.1 \ No newline at end of file +v1.2.2 \ No newline at end of file diff --git a/v1 b/v1 index 24e56e03..06043b8e 120000 --- a/v1 +++ b/v1 @@ -1 +1 @@ -v1.2.1 \ No newline at end of file +v1.2.2 \ No newline at end of file diff --git a/v1.2 b/v1.2 index 24e56e03..06043b8e 120000 --- a/v1.2 +++ b/v1.2 @@ -1 +1 @@ -v1.2.1 \ No newline at end of file +v1.2.2 \ No newline at end of file diff --git a/v1.2.2/.documenter-siteinfo.json b/v1.2.2/.documenter-siteinfo.json new file mode 100644 index 00000000..2571fc25 --- /dev/null +++ b/v1.2.2/.documenter-siteinfo.json @@ -0,0 +1 @@ +{"documenter":{"julia_version":"1.9.4","generation_timestamp":"2023-11-29T01:35:51","documenter_version":"1.2.0"}} \ No newline at end of file diff --git a/v1.2.2/adjacency/index.html b/v1.2.2/adjacency/index.html new file mode 100644 index 00000000..dfb41a3a --- /dev/null +++ b/v1.2.2/adjacency/index.html @@ -0,0 +1,58 @@ + +Adjacency · ExtendableGrids.jl

Adjacency

This handles adjacency matrices between entities of polyhedral complexes, e.g. nodes, cells, edges etc.

An adjacency is described by an Adjacency matrix, which is a sparse matrix whose entries a 0 or 1. While such a matrix always can be stored as a SparseMatrixCSC, in general this would be a waste of storage.

For the general case, it is sufficient to only store the column start indieces and the column entries (row numbers), and to implicitely assume that nonzero entries are 1. This kind of storage is realised in a VariableTargetAdjacency.

In many cases, this can be compressed even more, if each column has the same length. In that case, a Matrix is sufficient to store the data. This is the usual base for implementing FEM/FVM assembly, and the interface for the general case should be similar.

From these ideas we develop the following interface for an adjacency a.

In order to avoid name confusion, we introduce the following notation which should be consistent with the use in assembly loops.

source: source of adjacency link target: target of adjacency link

E.g. the cell-node adjacency for FEM assembly links a number of cells with a collection of nodes. The cells are the sources, and the targets are the nodes.

getindex(a,i,isource) aka a[i,isource]: return i-th target of source j numsources(a): overall number of sources, e.g. number of cells numtargets(a): overall number of targets numtargets(a,isource): number of targets for source given by isource numlinks(a): number of links aka nonzero entries of adjacency matrix show(a): print stuff

Further API ideas:

  • Convert between Matrix and Variable target stuff using 0 entries as "padding"

API

ExtendableGrids.VariableTargetAdjacency — Method
VariableTargetAdjacency(
+    m::SparseArrays.SparseMatrixCSC{Tv<:Integer, Ti<:Integer}
+) -> VariableTargetAdjacency
+

Create variable target adjacency from adjacency matrix

source
Base.append! — Method
append!(adj::SerialVariableTargetAdjacency, len) -> Vector
+

Append a column to adjacency.

source
Base.append! — Method
append!(adj::VariableTargetAdjacency, column) -> Vector
+

Append a column to adjacency.

source
Base.getindex — Method
getindex(
+    adj::SerialVariableTargetAdjacency,
+    i,
+    isource
+) -> Any
+

Access adjacency as if it is a 2D Array

source
Base.getindex — Method
getindex(adj::VariableTargetAdjacency, i, isource) -> Any
+

Access adjacency as if it is a 2D Array

source
Base.show — Method
show(io::IO, adj::SerialVariableTargetAdjacency)
+

Show adjacency (in trasposed form; preliminary)

source
Base.show — Method
show(io::IO, adj::VariableTargetAdjacency)
+

Show adjacency (in trasposed form; preliminary)

source
ExtendableGrids.asparse — Method
asparse(
+    a::VariableTargetAdjacency
+) -> SparseArrays.SparseMatrixCSC{Int64}
+

Create sparse incidence matrix from adjacency

source
ExtendableGrids.makevar — Method
makevar(a::Array{T, 2}) -> VariableTargetAdjacency
+

Turn fixed target adjacency into variable target adjacency

source
ExtendableGrids.tryfix — Method
tryfix(
+    a::Union{Array{T, 2}, VariableTargetAdjacency{T}}
+) -> Any
+

Try to turn variable target adjacency into fixed target adjacency

source
diff --git a/v1.2.2/allindex/index.html b/v1.2.2/allindex/index.html new file mode 100644 index 00000000..d51b2703 --- /dev/null +++ b/v1.2.2/allindex/index.html @@ -0,0 +1,2 @@ + +Index · ExtendableGrids.jl

Index

Types and Constructors

Constants

    Methods

    diff --git a/v1.2.2/arraytools/index.html b/v1.2.2/arraytools/index.html new file mode 100644 index 00000000..80a5026c --- /dev/null +++ b/v1.2.2/arraytools/index.html @@ -0,0 +1,4 @@ + +Array tools · ExtendableGrids.jl

    Array tools

    API

    ExtendableGrids.geomspace — Method
    geomspace(a, b, ha, hb; tol, maxiterations) -> Any
+

    (Try to) create a subdivision of interval (a,b) stored in the returned array X such that

    • X[1]==a, X[end]==b
    • (X[2]-X[1])<=ha+tol*(b-a)
    • (X[end]-X[end-1])<=hb+tol*(b-a)
    • There is a number q such that X[i+1]-X[i] == q*(X[i]-X[i-1])
    • X is the array with the minimal possible number of points with the above property

    Caveat: the algorithm behind this is tested for many cases but unproven.

    Returns an Array containing the points of the subdivision.

    source
    ExtendableGrids.glue — Method
    c=glue(a,b)

    Glue together two vectors a and b resulting in a vector c. They last element of a shall be equal (up to tol) to the first element of b. The result fulfills length(c)=length(a)+length(b)-1

    source
    ExtendableGrids.linspace — Method
    linspace(a, b, n) -> Any
+

    Resurrect linspace despite https://github.com/JuliaLang/julia/pull/25896#issuecomment-363769368

    source
    diff --git a/v1.2.2/assembly/index.html b/v1.2.2/assembly/index.html new file mode 100644 index 00000000..3a342182 --- /dev/null +++ b/v1.2.2/assembly/index.html @@ -0,0 +1,2 @@ + +Assembly support · ExtendableGrids.jl

    Assembly support

    API

    ExtendableGrids.AT_NODES — Type
    abstract type AT_NODES <: AssemblyType

    causes interpolation at vertices of the grid (only for H1-conforming interpolations)

    source
    diff --git a/v1.2.2/assets/documenter.js b/v1.2.2/assets/documenter.js new file mode 100644 index 00000000..f5311607 --- /dev/null +++ b/v1.2.2/assets/documenter.js @@ -0,0 +1,889 @@ +// Generated by Documenter.jl +requirejs.config({ + paths: { + 'highlight-julia': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.8.0/languages/julia.min', + 'headroom': 'https://cdnjs.cloudflare.com/ajax/libs/headroom/0.12.0/headroom.min', + 'jqueryui': 'https://cdnjs.cloudflare.com/ajax/libs/jqueryui/1.13.2/jquery-ui.min', + 'minisearch': 'https://cdn.jsdelivr.net/npm/minisearch@6.1.0/dist/umd/index.min', + 'katex-auto-render': 'https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.16.8/contrib/auto-render.min', + 'jquery': 'https://cdnjs.cloudflare.com/ajax/libs/jquery/3.7.0/jquery.min', + 'headroom-jquery': 'https://cdnjs.cloudflare.com/ajax/libs/headroom/0.12.0/jQuery.headroom.min', + 'katex': 'https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.16.8/katex.min', + 'highlight': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.8.0/highlight.min', + 'highlight-julia-repl': 'https://cdnjs.cloudflare.com/ajax/libs/highlight.js/11.8.0/languages/julia-repl.min', + }, + shim: { + "highlight-julia": { + "deps": [ + "highlight" + ] + }, + "katex-auto-render": { + "deps": [ + "katex" + ] + }, + "headroom-jquery": { + "deps": [ + "jquery", + "headroom" + ] + }, + "highlight-julia-repl": { + "deps": [ + "highlight" + ] + } +} +}); +//////////////////////////////////////////////////////////////////////////////// +require(['jquery', 'katex', 'katex-auto-render'], function($, katex, renderMathInElement) { +$(document).ready(function() { + renderMathInElement( + document.body, + { + "delimiters": [ + { + "left": "$", + "right": "$", + "display": false + }, + { + "left": "$$", + "right": "$$", + "display": true + }, + { + "left": "\\[", + "right": "\\]", + "display": true + } + ] +} + + ); +}) + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery', 'highlight', 'highlight-julia', 'highlight-julia-repl'], function($) { +$(document).ready(function() { + hljs.highlightAll(); +}) + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +let timer = 0; +var isExpanded = true; + +$(document).on("click", ".docstring header", function () { + let articleToggleTitle = "Expand docstring"; + + debounce(() => { + if ($(this).siblings("section").is(":visible")) { + $(this) + .find(".docstring-article-toggle-button") + .removeClass("fa-chevron-down") + .addClass("fa-chevron-right"); + } else { + $(this) + .find(".docstring-article-toggle-button") + .removeClass("fa-chevron-right") + .addClass("fa-chevron-down"); + + articleToggleTitle = "Collapse docstring"; + } + + $(this) + .find(".docstring-article-toggle-button") + .prop("title", articleToggleTitle); + $(this).siblings("section").slideToggle(); + }); +}); + +$(document).on("click", ".docs-article-toggle-button", function () { + let articleToggleTitle = "Expand docstring"; + let navArticleToggleTitle = "Expand all docstrings"; + + debounce(() => { + if (isExpanded) { + $(this).removeClass("fa-chevron-up").addClass("fa-chevron-down"); + $(".docstring-article-toggle-button") + .removeClass("fa-chevron-down") + .addClass("fa-chevron-right"); + + isExpanded = false; + + $(".docstring section").slideUp(); + } else { + $(this).removeClass("fa-chevron-down").addClass("fa-chevron-up"); + $(".docstring-article-toggle-button") + .removeClass("fa-chevron-right") + .addClass("fa-chevron-down"); + + isExpanded = true; + articleToggleTitle = "Collapse docstring"; + navArticleToggleTitle = "Collapse all docstrings"; + + $(".docstring section").slideDown(); + } + + $(this).prop("title", navArticleToggleTitle); + $(".docstring-article-toggle-button").prop("title", articleToggleTitle); + }); +}); + +function debounce(callback, timeout = 300) { + if (Date.now() - timer > timeout) { + callback(); + } + + clearTimeout(timer); + + timer = Date.now(); +} + +}) +//////////////////////////////////////////////////////////////////////////////// +require([], function() { +function addCopyButtonCallbacks() { + for (const el of document.getElementsByTagName("pre")) { + const button = document.createElement("button"); + button.classList.add("copy-button", "fa-solid", "fa-copy"); + button.setAttribute("aria-label", "Copy this code block"); + button.setAttribute("title", "Copy"); + + el.appendChild(button); + + const success = function () { + button.classList.add("success", "fa-check"); + button.classList.remove("fa-copy"); + }; + + const failure = function () { + button.classList.add("error", "fa-xmark"); + button.classList.remove("fa-copy"); + }; + + button.addEventListener("click", function () { + copyToClipboard(el.innerText).then(success, failure); + + setTimeout(function () { + button.classList.add("fa-copy"); + button.classList.remove("success", "fa-check", "fa-xmark"); + }, 5000); + }); + } +} + +function copyToClipboard(text) { + // clipboard API is only available in secure contexts + if (window.navigator && window.navigator.clipboard) { + return window.navigator.clipboard.writeText(text); + } else { + return new Promise(function (resolve, reject) { + try { + const el = document.createElement("textarea"); + el.textContent = text; + el.style.position = "fixed"; + el.style.opacity = 0; + document.body.appendChild(el); + el.select(); + document.execCommand("copy"); + + resolve(); + } catch (err) { + reject(err); + } finally { + document.body.removeChild(el); + } + }); + } +} + +if (document.readyState === "loading") { + document.addEventListener("DOMContentLoaded", addCopyButtonCallbacks); +} else { + addCopyButtonCallbacks(); +} + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery', 'headroom', 'headroom-jquery'], function($, Headroom) { + +// Manages the top navigation bar (hides it when the user starts scrolling down on the +// mobile). +window.Headroom = Headroom; // work around buggy module loading? +$(document).ready(function () { + $("#documenter .docs-navbar").headroom({ + tolerance: { up: 10, down: 10 }, + }); +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery', 'minisearch'], function($, minisearch) { + +// In general, most search related things will have "search" as a prefix. +// To get an in-depth about the thought process you can refer: https://hetarth02.hashnode.dev/series/gsoc + +let results = []; +let timer = undefined; + +let data = documenterSearchIndex["docs"].map((x, key) => { + x["id"] = key; // minisearch requires a unique for each object + return x; +}); + +// list below is the lunr 2.1.3 list minus the intersect with names(Base) +// (all, any, get, in, is, only, which) and (do, else, for, let, where, while, with) +// ideally we'd just filter the original list but it's not available as a variable +const stopWords = new Set([ + "a", + "able", + "about", + "across", + "after", + "almost", + "also", + "am", + "among", + "an", + "and", + "are", + "as", + "at", + "be", + "because", + "been", + "but", + "by", + "can", + "cannot", + "could", + "dear", + "did", + "does", + "either", + "ever", + "every", + "from", + "got", + "had", + "has", + "have", + "he", + "her", + "hers", + "him", + "his", + "how", + "however", + "i", + "if", + "into", + "it", + "its", + "just", + "least", + "like", + "likely", + "may", + "me", + "might", + "most", + "must", + "my", + "neither", + "no", + "nor", + "not", + "of", + "off", + "often", + "on", + "or", + "other", + "our", + "own", + "rather", + "said", + "say", + "says", + "she", + "should", + "since", + "so", + "some", + "than", + "that", + "the", + "their", + "them", + "then", + "there", + "these", + "they", + "this", + "tis", + "to", + "too", + "twas", + "us", + "wants", + "was", + "we", + "were", + "what", + "when", + "who", + "whom", + "why", + "will", + "would", + "yet", + "you", + "your", +]); + +let index = new minisearch({ + fields: ["title", "text"], // fields to index for full-text search + storeFields: ["location", "title", "text", "category", "page"], // fields to return with search results + processTerm: (term) => { + let word = stopWords.has(term) ? null : term; + if (word) { + // custom trimmer that doesn't strip @ and !, which are used in julia macro and function names + word = word + .replace(/^[^a-zA-Z0-9@!]+/, "") + .replace(/[^a-zA-Z0-9@!]+$/, ""); + } + + return word ?? null; + }, + // add . as a separator, because otherwise "title": "Documenter.Anchors.add!", would not find anything if searching for "add!", only for the entire qualification + tokenize: (string) => string.split(/[\s\-\.]+/), + // options which will be applied during the search + searchOptions: { + boost: { title: 100 }, + fuzzy: 2, + processTerm: (term) => { + let word = stopWords.has(term) ? null : term; + if (word) { + word = word + .replace(/^[^a-zA-Z0-9@!]+/, "") + .replace(/[^a-zA-Z0-9@!]+$/, ""); + } + + return word ?? null; + }, + tokenize: (string) => string.split(/[\s\-\.]+/), + }, +}); + +index.addAll(data); + +let filters = [...new Set(data.map((x) => x.category))]; +var modal_filters = make_modal_body_filters(filters); +var filter_results = []; + +$(document).on("keyup", ".documenter-search-input", function (event) { + // Adding a debounce to prevent disruptions from super-speed typing! + debounce(() => update_search(filter_results), 300); +}); + +$(document).on("click", ".search-filter", function () { + if ($(this).hasClass("search-filter-selected")) { + $(this).removeClass("search-filter-selected"); + } else { + $(this).addClass("search-filter-selected"); + } + + // Adding a debounce to prevent disruptions from crazy clicking! + debounce(() => get_filters(), 300); +}); + +/** + * A debounce function, takes a function and an optional timeout in milliseconds + * + * @function callback + * @param {number} timeout + */ +function debounce(callback, timeout = 300) { + clearTimeout(timer); + timer = setTimeout(callback, timeout); +} + +/** + * Make/Update the search component + * + * @param {string[]} selected_filters + */ +function update_search(selected_filters = []) { + let initial_search_body = ` +
    Type something to get started!
    + `; + + let querystring = $(".documenter-search-input").val(); + + if (querystring.trim()) { + results = index.search(querystring, { + filter: (result) => { + // Filtering results + if (selected_filters.length === 0) { + return result.score >= 1; + } else { + return ( + result.score >= 1 && selected_filters.includes(result.category) + ); + } + }, + }); + + let search_result_container = ``; + let search_divider = `
    `; + + if (results.length) { + let links = []; + let count = 0; + let search_results = ""; + + results.forEach(function (result) { + if (result.location) { + // Checking for duplication of results for the same page + if (!links.includes(result.location)) { + search_results += make_search_result(result, querystring); + count++; + } + + links.push(result.location); + } + }); + + let result_count = `
    ${count} result(s)
    `; + + search_result_container = ` +
    + ${modal_filters} + ${search_divider} + ${result_count} +
    + ${search_results} +
    +
    + `; + } else { + search_result_container = ` +
    + ${modal_filters} + ${search_divider} +
    0 result(s)
    +
    +
    No result found!
    + `; + } + + if ($(".search-modal-card-body").hasClass("is-justify-content-center")) { + $(".search-modal-card-body").removeClass("is-justify-content-center"); + } + + $(".search-modal-card-body").html(search_result_container); + } else { + filter_results = []; + modal_filters = make_modal_body_filters(filters, filter_results); + + if (!$(".search-modal-card-body").hasClass("is-justify-content-center")) { + $(".search-modal-card-body").addClass("is-justify-content-center"); + } + + $(".search-modal-card-body").html(initial_search_body); + } +} + +/** + * Make the modal filter html + * + * @param {string[]} filters + * @param {string[]} selected_filters + * @returns string + */ +function make_modal_body_filters(filters, selected_filters = []) { + let str = ``; + + filters.forEach((val) => { + if (selected_filters.includes(val)) { + str += `${val}`; + } else { + str += `${val}`; + } + }); + + let filter_html = ` +
    + Filters: + ${str} +
    + `; + + return filter_html; +} + +/** + * Make the result component given a minisearch result data object and the value of the search input as queryString. + * To view the result object structure, refer: https://lucaong.github.io/minisearch/modules/_minisearch_.html#searchresult + * + * @param {object} result + * @param {string} querystring + * @returns string + */ +function make_search_result(result, querystring) { + let search_divider = `
    `; + let display_link = + result.location.slice(Math.max(0), Math.min(50, result.location.length)) + + (result.location.length > 30 ? "..." : ""); // To cut-off the link because it messes with the overflow of the whole div + + if (result.page !== "") { + display_link += ` (${result.page})`; + } + + let textindex = new RegExp(`\\b${querystring}\\b`, "i").exec(result.text); + let text = + textindex !== null + ? result.text.slice( + Math.max(textindex.index - 100, 0), + Math.min( + textindex.index + querystring.length + 100, + result.text.length + ) + ) + : ""; // cut-off text before and after from the match + + let display_result = text.length + ? "..." + + text.replace( + new RegExp(`\\b${querystring}\\b`, "i"), // For first occurrence + '$&' + ) + + "..." + : ""; // highlights the match + + let in_code = false; + if (!["page", "section"].includes(result.category.toLowerCase())) { + in_code = true; + } + + // We encode the full url to escape some special characters which can lead to broken links + let result_div = ` + +
    +
    ${result.title}
    +
    ${result.category}
    +
    +

    + ${display_result} +

    +
    + ${display_link} +
    +     + ${search_divider} + `; + + return result_div; +} + +/** + * Get selected filters, remake the filter html and lastly update the search modal + */ +function get_filters() { + let ele = $(".search-filters .search-filter-selected").get(); + filter_results = ele.map((x) => $(x).text().toLowerCase()); + modal_filters = make_modal_body_filters(filters, filter_results); + update_search(filter_results); +} + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +// Modal settings dialog +$(document).ready(function () { + var settings = $("#documenter-settings"); + $("#documenter-settings-button").click(function () { + settings.toggleClass("is-active"); + }); + // Close the dialog if X is clicked + $("#documenter-settings button.delete").click(function () { + settings.removeClass("is-active"); + }); + // Close dialog if ESC is pressed + $(document).keyup(function (e) { + if (e.keyCode == 27) settings.removeClass("is-active"); + }); +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +let search_modal_header = ` +
    +
    +

    + + + + +

    +
    +
    + +
    +
    +`; + +let initial_search_body = ` +
    Type something to get started!
    +`; + +let search_modal_footer = ` + +`; + +$(document.body).append( + ` + + ` +); + +document.querySelector(".docs-search-query").addEventListener("click", () => { + openModal(); +}); + +document.querySelector(".close-search-modal").addEventListener("click", () => { + closeModal(); +}); + +$(document).on("click", ".search-result-link", function () { + closeModal(); +}); + +document.addEventListener("keydown", (event) => { + if ((event.ctrlKey || event.metaKey) && event.key === "/") { + openModal(); + } else if (event.key === "Escape") { + closeModal(); + } + + return false; +}); + +// Functions to open and close a modal +function openModal() { + let searchModal = document.querySelector("#search-modal"); + + searchModal.classList.add("is-active"); + document.querySelector(".documenter-search-input").focus(); +} + +function closeModal() { + let searchModal = document.querySelector("#search-modal"); + let initial_search_body = ` +
    Type something to get started!
    + `; + + searchModal.classList.remove("is-active"); + document.querySelector(".documenter-search-input").blur(); + + if (!$(".search-modal-card-body").hasClass("is-justify-content-center")) { + $(".search-modal-card-body").addClass("is-justify-content-center"); + } + + $(".documenter-search-input").val(""); + $(".search-modal-card-body").html(initial_search_body); +} + +document + .querySelector("#search-modal .modal-background") + .addEventListener("click", () => { + closeModal(); + }); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +// Manages the showing and hiding of the sidebar. +$(document).ready(function () { + var sidebar = $("#documenter > .docs-sidebar"); + var sidebar_button = $("#documenter-sidebar-button"); + sidebar_button.click(function (ev) { + ev.preventDefault(); + sidebar.toggleClass("visible"); + if (sidebar.hasClass("visible")) { + // Makes sure that the current menu item is visible in the sidebar. + $("#documenter .docs-menu a.is-active").focus(); + } + }); + $("#documenter > .docs-main").bind("click", function (ev) { + if ($(ev.target).is(sidebar_button)) { + return; + } + if (sidebar.hasClass("visible")) { + sidebar.removeClass("visible"); + } + }); +}); + +// Resizes the package name / sitename in the sidebar if it is too wide. +// Inspired by: https://github.com/davatron5000/FitText.js +$(document).ready(function () { + e = $("#documenter .docs-autofit"); + function resize() { + var L = parseInt(e.css("max-width"), 10); + var L0 = e.width(); + if (L0 > L) { + var h0 = parseInt(e.css("font-size"), 10); + e.css("font-size", (L * h0) / L0); + // TODO: make sure it survives resizes? + } + } + // call once and then register events + resize(); + $(window).resize(resize); + $(window).on("orientationchange", resize); +}); + +// Scroll the navigation bar to the currently selected menu item +$(document).ready(function () { + var sidebar = $("#documenter .docs-menu").get(0); + var active = $("#documenter .docs-menu .is-active").get(0); + if (typeof active !== "undefined") { + sidebar.scrollTop = active.offsetTop - sidebar.offsetTop - 15; + } +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +// Theme picker setup +$(document).ready(function () { + // onchange callback + $("#documenter-themepicker").change(function themepick_callback(ev) { + var themename = $("#documenter-themepicker option:selected").attr("value"); + if (themename === "auto") { + // set_theme(window.matchMedia('(prefers-color-scheme: dark)').matches ? 'dark' : 'light'); + window.localStorage.removeItem("documenter-theme"); + } else { + // set_theme(themename); + window.localStorage.setItem("documenter-theme", themename); + } + // We re-use the global function from themeswap.js to actually do the swapping. + set_theme_from_local_storage(); + }); + + // Make sure that the themepicker displays the correct theme when the theme is retrieved + // from localStorage + if (typeof window.localStorage !== "undefined") { + var theme = window.localStorage.getItem("documenter-theme"); + if (theme !== null) { + $("#documenter-themepicker option").each(function (i, e) { + e.selected = e.value === theme; + }); + } + } +}); + +}) +//////////////////////////////////////////////////////////////////////////////// +require(['jquery'], function($) { + +// update the version selector with info from the siteinfo.js and ../versions.js files +$(document).ready(function () { + // If the version selector is disabled with DOCUMENTER_VERSION_SELECTOR_DISABLED in the + // siteinfo.js file, we just return immediately and not display the version selector. + if ( + typeof DOCUMENTER_VERSION_SELECTOR_DISABLED === "boolean" && + DOCUMENTER_VERSION_SELECTOR_DISABLED + ) { + return; + } + + var version_selector = $("#documenter .docs-version-selector"); + var version_selector_select = $("#documenter .docs-version-selector select"); + + version_selector_select.change(function (x) { + target_href = version_selector_select + .children("option:selected") + .get(0).value; + window.location.href = target_href; + }); + + // add the current version to the selector based on siteinfo.js, but only if the selector is empty + if ( + typeof DOCUMENTER_CURRENT_VERSION !== "undefined" && + $("#version-selector > option").length == 0 + ) { + var option = $( + "" + ); + version_selector_select.append(option); + } + + if (typeof DOC_VERSIONS !== "undefined") { + var existing_versions = version_selector_select.children("option"); + var existing_versions_texts = existing_versions.map(function (i, x) { + return x.text; + }); + DOC_VERSIONS.forEach(function (each) { + var version_url = documenterBaseURL + "/../" + each + "/"; + var existing_id = $.inArray(each, existing_versions_texts); + // if not already in the version selector, add it as a new option, + // otherwise update the old option with the URL and enable it + if (existing_id == -1) { + var option = $( + "" + ); + version_selector_select.append(option); + } else { + var option = existing_versions[existing_id]; + option.value = version_url; + option.disabled = false; + } + }); + } + + // only show the version selector if the selector has been populated + if (version_selector_select.children("option").length > 0) { + version_selector.toggleClass("visible"); + } +}); + +}) diff --git a/v1.2.2/assets/themes/documenter-dark.css b/v1.2.2/assets/themes/documenter-dark.css new file mode 100644 index 00000000..9f5449f4 --- /dev/null +++ b/v1.2.2/assets/themes/documenter-dark.css @@ -0,0 +1,7 @@ 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.button.is-link.is-loading::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-link.is-outlined{background-color:transparent;border-color:#1abc9c;color:#1abc9c}html.theme--documenter-dark .button.is-link.is-outlined:hover,html.theme--documenter-dark .button.is-link.is-outlined.is-hovered,html.theme--documenter-dark .button.is-link.is-outlined:focus,html.theme--documenter-dark .button.is-link.is-outlined.is-focused{background-color:#1abc9c;border-color:#1abc9c;color:#fff}html.theme--documenter-dark .button.is-link.is-outlined.is-loading::after{border-color:transparent transparent #1abc9c #1abc9c !important}html.theme--documenter-dark .button.is-link.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-link.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-link.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-link.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-link.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-link.is-outlined{background-color:transparent;border-color:#1abc9c;box-shadow:none;color:#1abc9c}html.theme--documenter-dark .button.is-link.is-inverted.is-outlined{background-color:transparent;border-color:#fff;color:#fff}html.theme--documenter-dark .button.is-link.is-inverted.is-outlined:hover,html.theme--documenter-dark .button.is-link.is-inverted.is-outlined.is-hovered,html.theme--documenter-dark .button.is-link.is-inverted.is-outlined:focus,html.theme--documenter-dark .button.is-link.is-inverted.is-outlined.is-focused{background-color:#fff;color:#1abc9c}html.theme--documenter-dark .button.is-link.is-inverted.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-link.is-inverted.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-link.is-inverted.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-link.is-inverted.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #1abc9c #1abc9c !important}html.theme--documenter-dark .button.is-link.is-inverted.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-link.is-inverted.is-outlined{background-color:transparent;border-color:#fff;box-shadow:none;color:#fff}html.theme--documenter-dark .button.is-link.is-light{background-color:#edfdf9;color:#15987e}html.theme--documenter-dark .button.is-link.is-light:hover,html.theme--documenter-dark .button.is-link.is-light.is-hovered{background-color:#e2fbf6;border-color:transparent;color:#15987e}html.theme--documenter-dark .button.is-link.is-light:active,html.theme--documenter-dark .button.is-link.is-light.is-active{background-color:#d7f9f3;border-color:transparent;color:#15987e}html.theme--documenter-dark .button.is-info{background-color:#024c7d;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-info:hover,html.theme--documenter-dark .button.is-info.is-hovered{background-color:#024470;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-info:focus,html.theme--documenter-dark .button.is-info.is-focused{border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-info:focus:not(:active),html.theme--documenter-dark .button.is-info.is-focused:not(:active){box-shadow:0 0 0 0.125em rgba(2,76,125,0.25)}html.theme--documenter-dark .button.is-info:active,html.theme--documenter-dark .button.is-info.is-active{background-color:#023d64;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-info[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-info{background-color:#024c7d;border-color:#024c7d;box-shadow:none}html.theme--documenter-dark .button.is-info.is-inverted{background-color:#fff;color:#024c7d}html.theme--documenter-dark .button.is-info.is-inverted:hover,html.theme--documenter-dark .button.is-info.is-inverted.is-hovered{background-color:#f2f2f2}html.theme--documenter-dark .button.is-info.is-inverted[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-info.is-inverted{background-color:#fff;border-color:transparent;box-shadow:none;color:#024c7d}html.theme--documenter-dark .button.is-info.is-loading::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-info.is-outlined{background-color:transparent;border-color:#024c7d;color:#024c7d}html.theme--documenter-dark .button.is-info.is-outlined:hover,html.theme--documenter-dark .button.is-info.is-outlined.is-hovered,html.theme--documenter-dark .button.is-info.is-outlined:focus,html.theme--documenter-dark .button.is-info.is-outlined.is-focused{background-color:#024c7d;border-color:#024c7d;color:#fff}html.theme--documenter-dark .button.is-info.is-outlined.is-loading::after{border-color:transparent transparent #024c7d #024c7d !important}html.theme--documenter-dark .button.is-info.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-info.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-info.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-info.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-info.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-info.is-outlined{background-color:transparent;border-color:#024c7d;box-shadow:none;color:#024c7d}html.theme--documenter-dark .button.is-info.is-inverted.is-outlined{background-color:transparent;border-color:#fff;color:#fff}html.theme--documenter-dark .button.is-info.is-inverted.is-outlined:hover,html.theme--documenter-dark .button.is-info.is-inverted.is-outlined.is-hovered,html.theme--documenter-dark .button.is-info.is-inverted.is-outlined:focus,html.theme--documenter-dark .button.is-info.is-inverted.is-outlined.is-focused{background-color:#fff;color:#024c7d}html.theme--documenter-dark .button.is-info.is-inverted.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-info.is-inverted.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-info.is-inverted.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-info.is-inverted.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #024c7d #024c7d !important}html.theme--documenter-dark .button.is-info.is-inverted.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-info.is-inverted.is-outlined{background-color:transparent;border-color:#fff;box-shadow:none;color:#fff}html.theme--documenter-dark .button.is-info.is-light{background-color:#ebf7ff;color:#0e9dfb}html.theme--documenter-dark .button.is-info.is-light:hover,html.theme--documenter-dark .button.is-info.is-light.is-hovered{background-color:#def2fe;border-color:transparent;color:#0e9dfb}html.theme--documenter-dark .button.is-info.is-light:active,html.theme--documenter-dark .button.is-info.is-light.is-active{background-color:#d2edfe;border-color:transparent;color:#0e9dfb}html.theme--documenter-dark .button.is-success{background-color:#008438;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-success:hover,html.theme--documenter-dark .button.is-success.is-hovered{background-color:#073;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-success:focus,html.theme--documenter-dark .button.is-success.is-focused{border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-success:focus:not(:active),html.theme--documenter-dark .button.is-success.is-focused:not(:active){box-shadow:0 0 0 0.125em rgba(0,132,56,0.25)}html.theme--documenter-dark .button.is-success:active,html.theme--documenter-dark .button.is-success.is-active{background-color:#006b2d;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-success[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-success{background-color:#008438;border-color:#008438;box-shadow:none}html.theme--documenter-dark .button.is-success.is-inverted{background-color:#fff;color:#008438}html.theme--documenter-dark .button.is-success.is-inverted:hover,html.theme--documenter-dark .button.is-success.is-inverted.is-hovered{background-color:#f2f2f2}html.theme--documenter-dark .button.is-success.is-inverted[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-success.is-inverted{background-color:#fff;border-color:transparent;box-shadow:none;color:#008438}html.theme--documenter-dark .button.is-success.is-loading::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-success.is-outlined{background-color:transparent;border-color:#008438;color:#008438}html.theme--documenter-dark .button.is-success.is-outlined:hover,html.theme--documenter-dark .button.is-success.is-outlined.is-hovered,html.theme--documenter-dark .button.is-success.is-outlined:focus,html.theme--documenter-dark .button.is-success.is-outlined.is-focused{background-color:#008438;border-color:#008438;color:#fff}html.theme--documenter-dark .button.is-success.is-outlined.is-loading::after{border-color:transparent transparent #008438 #008438 !important}html.theme--documenter-dark .button.is-success.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-success.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-success.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-success.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-success.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-success.is-outlined{background-color:transparent;border-color:#008438;box-shadow:none;color:#008438}html.theme--documenter-dark .button.is-success.is-inverted.is-outlined{background-color:transparent;border-color:#fff;color:#fff}html.theme--documenter-dark .button.is-success.is-inverted.is-outlined:hover,html.theme--documenter-dark .button.is-success.is-inverted.is-outlined.is-hovered,html.theme--documenter-dark .button.is-success.is-inverted.is-outlined:focus,html.theme--documenter-dark .button.is-success.is-inverted.is-outlined.is-focused{background-color:#fff;color:#008438}html.theme--documenter-dark .button.is-success.is-inverted.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-success.is-inverted.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-success.is-inverted.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-success.is-inverted.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #008438 #008438 !important}html.theme--documenter-dark .button.is-success.is-inverted.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-success.is-inverted.is-outlined{background-color:transparent;border-color:#fff;box-shadow:none;color:#fff}html.theme--documenter-dark .button.is-success.is-light{background-color:#ebfff3;color:#00eb64}html.theme--documenter-dark .button.is-success.is-light:hover,html.theme--documenter-dark .button.is-success.is-light.is-hovered{background-color:#deffec;border-color:transparent;color:#00eb64}html.theme--documenter-dark .button.is-success.is-light:active,html.theme--documenter-dark .button.is-success.is-light.is-active{background-color:#d1ffe5;border-color:transparent;color:#00eb64}html.theme--documenter-dark .button.is-warning{background-color:#ad8100;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-warning:hover,html.theme--documenter-dark .button.is-warning.is-hovered{background-color:#a07700;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-warning:focus,html.theme--documenter-dark .button.is-warning.is-focused{border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-warning:focus:not(:active),html.theme--documenter-dark .button.is-warning.is-focused:not(:active){box-shadow:0 0 0 0.125em rgba(173,129,0,0.25)}html.theme--documenter-dark .button.is-warning:active,html.theme--documenter-dark .button.is-warning.is-active{background-color:#946e00;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-warning[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-warning{background-color:#ad8100;border-color:#ad8100;box-shadow:none}html.theme--documenter-dark .button.is-warning.is-inverted{background-color:#fff;color:#ad8100}html.theme--documenter-dark .button.is-warning.is-inverted:hover,html.theme--documenter-dark .button.is-warning.is-inverted.is-hovered{background-color:#f2f2f2}html.theme--documenter-dark .button.is-warning.is-inverted[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-warning.is-inverted{background-color:#fff;border-color:transparent;box-shadow:none;color:#ad8100}html.theme--documenter-dark .button.is-warning.is-loading::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-warning.is-outlined{background-color:transparent;border-color:#ad8100;color:#ad8100}html.theme--documenter-dark .button.is-warning.is-outlined:hover,html.theme--documenter-dark .button.is-warning.is-outlined.is-hovered,html.theme--documenter-dark .button.is-warning.is-outlined:focus,html.theme--documenter-dark .button.is-warning.is-outlined.is-focused{background-color:#ad8100;border-color:#ad8100;color:#fff}html.theme--documenter-dark .button.is-warning.is-outlined.is-loading::after{border-color:transparent transparent #ad8100 #ad8100 !important}html.theme--documenter-dark .button.is-warning.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-warning.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-warning.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-warning.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-warning.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-warning.is-outlined{background-color:transparent;border-color:#ad8100;box-shadow:none;color:#ad8100}html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined{background-color:transparent;border-color:#fff;color:#fff}html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined:hover,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-hovered,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined:focus,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-focused{background-color:#fff;color:#ad8100}html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #ad8100 #ad8100 !important}html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-warning.is-inverted.is-outlined{background-color:transparent;border-color:#fff;box-shadow:none;color:#fff}html.theme--documenter-dark .button.is-warning.is-light{background-color:#fffaeb;color:#d19c00}html.theme--documenter-dark .button.is-warning.is-light:hover,html.theme--documenter-dark .button.is-warning.is-light.is-hovered{background-color:#fff7de;border-color:transparent;color:#d19c00}html.theme--documenter-dark .button.is-warning.is-light:active,html.theme--documenter-dark .button.is-warning.is-light.is-active{background-color:#fff3d1;border-color:transparent;color:#d19c00}html.theme--documenter-dark .button.is-danger{background-color:#9e1b0d;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-danger:hover,html.theme--documenter-dark .button.is-danger.is-hovered{background-color:#92190c;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-danger:focus,html.theme--documenter-dark .button.is-danger.is-focused{border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-danger:focus:not(:active),html.theme--documenter-dark .button.is-danger.is-focused:not(:active){box-shadow:0 0 0 0.125em rgba(158,27,13,0.25)}html.theme--documenter-dark .button.is-danger:active,html.theme--documenter-dark .button.is-danger.is-active{background-color:#86170b;border-color:transparent;color:#fff}html.theme--documenter-dark .button.is-danger[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-danger{background-color:#9e1b0d;border-color:#9e1b0d;box-shadow:none}html.theme--documenter-dark .button.is-danger.is-inverted{background-color:#fff;color:#9e1b0d}html.theme--documenter-dark .button.is-danger.is-inverted:hover,html.theme--documenter-dark .button.is-danger.is-inverted.is-hovered{background-color:#f2f2f2}html.theme--documenter-dark .button.is-danger.is-inverted[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-danger.is-inverted{background-color:#fff;border-color:transparent;box-shadow:none;color:#9e1b0d}html.theme--documenter-dark .button.is-danger.is-loading::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-danger.is-outlined{background-color:transparent;border-color:#9e1b0d;color:#9e1b0d}html.theme--documenter-dark .button.is-danger.is-outlined:hover,html.theme--documenter-dark .button.is-danger.is-outlined.is-hovered,html.theme--documenter-dark .button.is-danger.is-outlined:focus,html.theme--documenter-dark .button.is-danger.is-outlined.is-focused{background-color:#9e1b0d;border-color:#9e1b0d;color:#fff}html.theme--documenter-dark .button.is-danger.is-outlined.is-loading::after{border-color:transparent transparent #9e1b0d #9e1b0d !important}html.theme--documenter-dark .button.is-danger.is-outlined.is-loading:hover::after,html.theme--documenter-dark .button.is-danger.is-outlined.is-loading.is-hovered::after,html.theme--documenter-dark .button.is-danger.is-outlined.is-loading:focus::after,html.theme--documenter-dark .button.is-danger.is-outlined.is-loading.is-focused::after{border-color:transparent transparent #fff #fff !important}html.theme--documenter-dark .button.is-danger.is-outlined[disabled],fieldset[disabled] html.theme--documenter-dark .button.is-danger.is-outlined{background-color:transparent;border-color:#9e1b0d;box-shadow:none;color:#9e1b0d}html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined{background-color:transparent;border-color:#fff;color:#fff}html.theme--documenter-dark .button.is-danger.is-inverted.is-outlined:hover,html.theme--documenter-dark 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.button.is-danger.is-light{background-color:#fdeeec;color:#ec311d}html.theme--documenter-dark .button.is-danger.is-light:hover,html.theme--documenter-dark .button.is-danger.is-light.is-hovered{background-color:#fce3e0;border-color:transparent;color:#ec311d}html.theme--documenter-dark .button.is-danger.is-light:active,html.theme--documenter-dark .button.is-danger.is-light.is-active{background-color:#fcd8d5;border-color:transparent;color:#ec311d}html.theme--documenter-dark .button.is-small,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.button{font-size:.75rem}html.theme--documenter-dark .button.is-small:not(.is-rounded),html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.button:not(.is-rounded){border-radius:3px}html.theme--documenter-dark .button.is-normal{font-size:1rem}html.theme--documenter-dark .button.is-medium{font-size:1.25rem}html.theme--documenter-dark .button.is-large{font-size:1.5rem}html.theme--documenter-dark 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.button{margin-bottom:0.5rem}html.theme--documenter-dark .buttons .button:not(:last-child):not(.is-fullwidth){margin-right:.5rem}html.theme--documenter-dark .buttons:last-child{margin-bottom:-0.5rem}html.theme--documenter-dark .buttons:not(:last-child){margin-bottom:1rem}html.theme--documenter-dark .buttons.are-small .button:not(.is-normal):not(.is-medium):not(.is-large){font-size:.75rem}html.theme--documenter-dark .buttons.are-small .button:not(.is-normal):not(.is-medium):not(.is-large):not(.is-rounded){border-radius:3px}html.theme--documenter-dark .buttons.are-medium .button:not(.is-small):not(.is-normal):not(.is-large){font-size:1.25rem}html.theme--documenter-dark .buttons.are-large .button:not(.is-small):not(.is-normal):not(.is-medium){font-size:1.5rem}html.theme--documenter-dark .buttons.has-addons .button:not(:first-child){border-bottom-left-radius:0;border-top-left-radius:0}html.theme--documenter-dark .buttons.has-addons 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.button.is-selected:hover{z-index:4}html.theme--documenter-dark .buttons.has-addons .button.is-expanded{flex-grow:1;flex-shrink:1}html.theme--documenter-dark .buttons.is-centered{justify-content:center}html.theme--documenter-dark .buttons.is-centered:not(.has-addons) .button:not(.is-fullwidth){margin-left:0.25rem;margin-right:0.25rem}html.theme--documenter-dark .buttons.is-right{justify-content:flex-end}html.theme--documenter-dark .buttons.is-right:not(.has-addons) .button:not(.is-fullwidth){margin-left:0.25rem;margin-right:0.25rem}@media screen and (max-width: 768px){html.theme--documenter-dark .button.is-responsive.is-small,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.is-responsive{font-size:.5625rem}html.theme--documenter-dark .button.is-responsive,html.theme--documenter-dark .button.is-responsive.is-normal{font-size:.65625rem}html.theme--documenter-dark .button.is-responsive.is-medium{font-size:.75rem}html.theme--documenter-dark 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h1,html.theme--documenter-dark .content h2,html.theme--documenter-dark .content h3,html.theme--documenter-dark .content h4,html.theme--documenter-dark .content h5,html.theme--documenter-dark .content h6{color:#f2f2f2;font-weight:600;line-height:1.125}html.theme--documenter-dark .content h1{font-size:2em;margin-bottom:0.5em}html.theme--documenter-dark .content h1:not(:first-child){margin-top:1em}html.theme--documenter-dark .content h2{font-size:1.75em;margin-bottom:0.5714em}html.theme--documenter-dark .content h2:not(:first-child){margin-top:1.1428em}html.theme--documenter-dark .content h3{font-size:1.5em;margin-bottom:0.6666em}html.theme--documenter-dark .content h3:not(:first-child){margin-top:1.3333em}html.theme--documenter-dark .content h4{font-size:1.25em;margin-bottom:0.8em}html.theme--documenter-dark .content h5{font-size:1.125em;margin-bottom:0.8888em}html.theme--documenter-dark .content h6{font-size:1em;margin-bottom:1em}html.theme--documenter-dark .content blockquote{background-color:#282f2f;border-left:5px solid #5e6d6f;padding:1.25em 1.5em}html.theme--documenter-dark .content ol{list-style-position:outside;margin-left:2em;margin-top:1em}html.theme--documenter-dark .content ol:not([type]){list-style-type:decimal}html.theme--documenter-dark .content ol.is-lower-alpha:not([type]){list-style-type:lower-alpha}html.theme--documenter-dark .content ol.is-lower-roman:not([type]){list-style-type:lower-roman}html.theme--documenter-dark .content ol.is-upper-alpha:not([type]){list-style-type:upper-alpha}html.theme--documenter-dark .content ol.is-upper-roman:not([type]){list-style-type:upper-roman}html.theme--documenter-dark .content ul{list-style:disc outside;margin-left:2em;margin-top:1em}html.theme--documenter-dark .content ul ul{list-style-type:circle;margin-top:0.5em}html.theme--documenter-dark .content ul ul ul{list-style-type:square}html.theme--documenter-dark .content dd{margin-left:2em}html.theme--documenter-dark .content figure{margin-left:2em;margin-right:2em;text-align:center}html.theme--documenter-dark .content figure:not(:first-child){margin-top:2em}html.theme--documenter-dark .content figure:not(:last-child){margin-bottom:2em}html.theme--documenter-dark .content figure img{display:inline-block}html.theme--documenter-dark .content figure figcaption{font-style:italic}html.theme--documenter-dark .content pre{-webkit-overflow-scrolling:touch;overflow-x:auto;padding:0;white-space:pre;word-wrap:normal}html.theme--documenter-dark .content sup,html.theme--documenter-dark .content sub{font-size:75%}html.theme--documenter-dark .content table{width:100%}html.theme--documenter-dark .content table td,html.theme--documenter-dark .content table th{border:1px solid #5e6d6f;border-width:0 0 1px;padding:0.5em 0.75em;vertical-align:top}html.theme--documenter-dark .content table th{color:#f2f2f2}html.theme--documenter-dark .content table th:not([align]){text-align:inherit}html.theme--documenter-dark .content table thead td,html.theme--documenter-dark .content table thead th{border-width:0 0 2px;color:#f2f2f2}html.theme--documenter-dark .content table tfoot td,html.theme--documenter-dark .content table tfoot th{border-width:2px 0 0;color:#f2f2f2}html.theme--documenter-dark .content table tbody tr:last-child td,html.theme--documenter-dark .content table tbody tr:last-child th{border-bottom-width:0}html.theme--documenter-dark .content .tabs li+li{margin-top:0}html.theme--documenter-dark .content.is-small,html.theme--documenter-dark #documenter .docs-sidebar form.docs-search>input.content{font-size:.75rem}html.theme--documenter-dark .content.is-normal{font-size:1rem}html.theme--documenter-dark .content.is-medium{font-size:1.25rem}html.theme--documenter-dark .content.is-large{font-size:1.5rem}html.theme--documenter-dark .icon{align-items:center;display:inline-flex;justify-content:center;height:1.5rem;width:1.5rem}html.theme--documenter-dark .icon.is-small,html.theme--documenter-dark #documenter 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.docs-logo>img.is-5by4{padding-top:80%}html.theme--documenter-dark .image.is-4by3,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-4by3{padding-top:75%}html.theme--documenter-dark .image.is-3by2,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-3by2{padding-top:66.6666%}html.theme--documenter-dark .image.is-5by3,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-5by3{padding-top:60%}html.theme--documenter-dark .image.is-16by9,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-16by9{padding-top:56.25%}html.theme--documenter-dark .image.is-2by1,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-2by1{padding-top:50%}html.theme--documenter-dark .image.is-3by1,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-3by1{padding-top:33.3333%}html.theme--documenter-dark .image.is-4by5,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-4by5{padding-top:125%}html.theme--documenter-dark .image.is-3by4,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-3by4{padding-top:133.3333%}html.theme--documenter-dark .image.is-2by3,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-2by3{padding-top:150%}html.theme--documenter-dark .image.is-3by5,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-3by5{padding-top:166.6666%}html.theme--documenter-dark .image.is-9by16,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-9by16{padding-top:177.7777%}html.theme--documenter-dark .image.is-1by2,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-1by2{padding-top:200%}html.theme--documenter-dark .image.is-1by3,html.theme--documenter-dark #documenter .docs-sidebar .docs-logo>img.is-1by3{padding-top:300%}html.theme--documenter-dark .image.is-16x16,html.theme--documenter-dark #documenter .docs-sidebar 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span.sgr42{background-color:#066f00}.ansi span.sgr43{background-color:#856b00}.ansi span.sgr44{background-color:#2149b0}.ansi span.sgr45{background-color:#7d4498}.ansi span.sgr46{background-color:#007989}.ansi span.sgr47{background-color:gray}.ansi span.sgr90{color:#616161}.ansi span.sgr91{color:#cb3c33}.ansi span.sgr92{color:#0e8300}.ansi span.sgr93{color:#a98800}.ansi span.sgr94{color:#3c5dcd}.ansi span.sgr95{color:#9256af}.ansi span.sgr96{color:#008fa3}.ansi span.sgr97{color:#f5f5f5}.ansi span.sgr100{background-color:#616161}.ansi span.sgr101{background-color:#cb3c33}.ansi span.sgr102{background-color:#0e8300}.ansi span.sgr103{background-color:#a98800}.ansi span.sgr104{background-color:#3c5dcd}.ansi span.sgr105{background-color:#9256af}.ansi span.sgr106{background-color:#008fa3}.ansi span.sgr107{background-color:#f5f5f5}code.language-julia-repl>span.hljs-meta{color:#066f00;font-weight:bolder}/*! + Theme: Default + Description: Original highlight.js style + Author: (c) Ivan Sagalaev + Maintainer: @highlightjs/core-team + Website: https://highlightjs.org/ + License: see project LICENSE + Touched: 2021 +*/pre code.hljs{display:block;overflow-x:auto;padding:1em}code.hljs{padding:3px 5px}.hljs{background:#F3F3F3;color:#444}.hljs-comment{color:#697070}.hljs-tag,.hljs-punctuation{color:#444a}.hljs-tag .hljs-name,.hljs-tag .hljs-attr{color:#444}.hljs-keyword,.hljs-attribute,.hljs-selector-tag,.hljs-meta .hljs-keyword,.hljs-doctag,.hljs-name{font-weight:bold}.hljs-type,.hljs-string,.hljs-number,.hljs-selector-id,.hljs-selector-class,.hljs-quote,.hljs-template-tag,.hljs-deletion{color:#880000}.hljs-title,.hljs-section{color:#880000;font-weight:bold}.hljs-regexp,.hljs-symbol,.hljs-variable,.hljs-template-variable,.hljs-link,.hljs-selector-attr,.hljs-operator,.hljs-selector-pseudo{color:#ab5656}.hljs-literal{color:#695}.hljs-built_in,.hljs-bullet,.hljs-code,.hljs-addition{color:#397300}.hljs-meta{color:#1f7199}.hljs-meta .hljs-string{color:#38a}.hljs-emphasis{font-style:italic}.hljs-strong{font-weight:bold}.gap-4{gap:1rem} diff --git a/v1.2.2/assets/themeswap.js b/v1.2.2/assets/themeswap.js new file mode 100644 index 00000000..9f5eebe6 --- /dev/null +++ b/v1.2.2/assets/themeswap.js @@ -0,0 +1,84 @@ +// Small function to quickly swap out themes. Gets put into the tag.. +function set_theme_from_local_storage() { + // Initialize the theme to null, which means default + var theme = null; + // If the browser supports the localstorage and is not disabled then try to get the + // documenter theme + if (window.localStorage != null) { + // Get the user-picked theme from localStorage. May be `null`, which means the default + // theme. + theme = window.localStorage.getItem("documenter-theme"); + } + // Check if the users preference is for dark color scheme + var darkPreference = + window.matchMedia("(prefers-color-scheme: dark)").matches === true; + // Initialize a few variables for the loop: + // + // - active: will contain the index of the theme that should be active. Note that there + // is no guarantee that localStorage contains sane values. If `active` stays `null` + // we either could not find the theme or it is the default (primary) theme anyway. + // Either way, we then need to stick to the primary theme. + // + // - disabled: style sheets that should be disabled (i.e. all the theme style sheets + // that are not the currently active theme) + var active = null; + var disabled = []; + var primaryLightTheme = null; + var primaryDarkTheme = null; + for (var i = 0; i < document.styleSheets.length; i++) { + var ss = document.styleSheets[i]; + // The tag of each style sheet is expected to have a data-theme-name attribute + // which must contain the name of the theme. The names in localStorage much match this. + var themename = ss.ownerNode.getAttribute("data-theme-name"); + // attribute not set => non-theme stylesheet => ignore + if (themename === null) continue; + // To distinguish the default (primary) theme, it needs to have the data-theme-primary + // attribute set. + if (ss.ownerNode.getAttribute("data-theme-primary") !== null) { + primaryLightTheme = themename; + } + // Check if the theme is primary dark theme so that we could store its name in darkTheme + if (ss.ownerNode.getAttribute("data-theme-primary-dark") !== null) { + primaryDarkTheme = themename; + } + // If we find a matching theme (and it's not the default), we'll set active to non-null + if (themename === theme) active = i; + // Store the style sheets of inactive themes so that we could disable them + if (themename !== theme) disabled.push(ss); + } + var activeTheme = null; + if (active !== null) { + // If we did find an active theme, we'll (1) add the theme--$(theme) class to + document.getElementsByTagName("html")[0].className = "theme--" + theme; + activeTheme = theme; + } else { + // If we did _not_ find an active theme, then we need to fall back to the primary theme + // which can either be dark or light, depending on the user's OS preference. + var activeTheme = darkPreference ? primaryDarkTheme : primaryLightTheme; + // In case it somehow happens that the relevant primary theme was not found in the + // preceding loop, we abort without doing anything. + if (activeTheme === null) { + console.error("Unable to determine primary theme."); + return; + } + // When switching to the primary light theme, then we must not have a class name + // for the tag. That's only for non-primary or the primary dark theme. + if (darkPreference) { + document.getElementsByTagName("html")[0].className = + "theme--" + activeTheme; + } else { + document.getElementsByTagName("html")[0].className = ""; + } + } + for (var i = 0; i < document.styleSheets.length; i++) { + var ss = document.styleSheets[i]; + // The tag of each style sheet is expected to have a data-theme-name attribute + // which must contain the name of the theme. The names in localStorage much match this. + var themename = ss.ownerNode.getAttribute("data-theme-name"); + // attribute not set => non-theme stylesheet => ignore + if (themename === null) continue; + // we'll disable all the stylesheets, except for the active one + ss.disabled = !(themename == activeTheme); + } +} +set_theme_from_local_storage(); diff --git a/v1.2.2/assets/warner.js b/v1.2.2/assets/warner.js new file mode 100644 index 00000000..3f6f5d00 --- /dev/null +++ b/v1.2.2/assets/warner.js @@ -0,0 +1,52 @@ +function maybeAddWarning() { + // DOCUMENTER_NEWEST is defined in versions.js, DOCUMENTER_CURRENT_VERSION and DOCUMENTER_STABLE + // in siteinfo.js. + // If either of these are undefined something went horribly wrong, so we abort. + if ( + window.DOCUMENTER_NEWEST === undefined || + window.DOCUMENTER_CURRENT_VERSION === undefined || + window.DOCUMENTER_STABLE === undefined + ) { + return; + } + + // Current version is not a version number, so we can't tell if it's the newest version. Abort. + if (!/v(\d+\.)*\d+/.test(window.DOCUMENTER_CURRENT_VERSION)) { + return; + } + + // Current version is newest version, so no need to add a warning. + if (window.DOCUMENTER_NEWEST === window.DOCUMENTER_CURRENT_VERSION) { + return; + } + + // Add a noindex meta tag (unless one exists) so that search engines don't index this version of the docs. + if (document.body.querySelector('meta[name="robots"]') === null) { + const meta = document.createElement("meta"); + meta.name = "robots"; + meta.content = "noindex"; + + document.getElementsByTagName("head")[0].appendChild(meta); + } + + const div = document.createElement("div"); + div.classList.add("outdated-warning-overlay"); + const closer = document.createElement("button"); + closer.classList.add("outdated-warning-closer", "delete"); + closer.addEventListener("click", function () { + document.body.removeChild(div); + }); + const href = window.documenterBaseURL + "/../" + window.DOCUMENTER_STABLE; + div.innerHTML = + 'This documentation is not for the latest stable release, but for either the development version or an older release.
    Click here to go to the documentation for the latest stable release.'; + div.appendChild(closer); + document.body.appendChild(div); +} + +if (document.readyState === "loading") { + document.addEventListener("DOMContentLoaded", maybeAddWarning); +} else { + maybeAddWarning(); +} diff --git a/v1.2.2/cellfinder/index.html b/v1.2.2/cellfinder/index.html new file mode 100644 index 00000000..64843adb --- /dev/null +++ b/v1.2.2/cellfinder/index.html @@ -0,0 +1,2 @@ + +Search and Interpolation · ExtendableGrids.jl

    Search and Interpolation

    ExtendableGrids.gFindLocal! — Function
    icellfound=GFindLocal!(xref,cellfinder,p; icellstart=1,eps=1.0e-14, trybrute=true)

    Find cell containing point p starting with cell number icellstart.

    Returns cell number if found, zero otherwise. If trybrute==true try gFindBruteForce! before giving up. Upon return, xref contains the barycentric coordinates of the point in the sequence dim+1, 1...dim

    Warning

    Currently implemented for simplex grids only.

    source
    ExtendableGrids.gFindBruteForce! — Function
    icellfound=gFindBruteForce!(xref,cellfinder,p; icellstart=1,eps=1.0e-14)

    Find cell containing point p starting with cell number icellstart.

    Returns cell number if found, zero otherwise. Upon return, xref contains the barycentric coordinates of the point in the sequence dim+1, 1...dim

    Warning

    Currently implemented for simplex grids only.

    source

    Interpolation

    ExtendableGrids.interpolate — Function
    u_to=interpolate(grid_to, u_from, grid_from;eps=1.0e-14,trybrute=true)

    Piecewise linear interpolation of function u_from on grid grid_from to grid_to. Works for matrices with second dimension corresponding to grid nodes and for vectors.

    Warning

    May be slow on non-convex domains. If trybrute==false it may even fail.

    Warning

    Currently implemented for simplex grids only.

    source
    diff --git a/v1.2.2/coordinatesystem/index.html b/v1.2.2/coordinatesystem/index.html new file mode 100644 index 00000000..561bfab2 --- /dev/null +++ b/v1.2.2/coordinatesystem/index.html @@ -0,0 +1,12 @@ + +Coordinate systems · ExtendableGrids.jl

    Coordinate systems

    Coordinate systems are described via abstract types. The list of coordinate systems can be obtained with the coordinatesystems method:

    AbstractCoordinateSystem
+├─ Cartesian1D
+├─ Cartesian2D
+├─ Cartesian3D
+├─ Cylindrical2D
+├─ Cylindrical3D
+├─ Polar1D
+├─ Polar2D
+├─ Spherical1D
+└─ Spherical3D

    API

    diff --git a/v1.2.2/elementgeometry/index.html b/v1.2.2/elementgeometry/index.html new file mode 100644 index 00000000..09a22716 --- /dev/null +++ b/v1.2.2/elementgeometry/index.html @@ -0,0 +1,33 @@ + +Element geometry · ExtendableGrids.jl

    Element geometry

    Element geometries are described via abstract types. The list of element geometries systems can be obtained with the elementgeometries method:

    AbstractElementGeometry
+├─ AbstractElementGeometry0D
+│  └─ Vertex0D
+├─ AbstractElementGeometry1D
+│  └─ Edge1D
+├─ AbstractElementGeometry2D
+│  ├─ Circle2D
+│  └─ Polygon2D
+│     ├─ Hexagon2D
+│     ├─ Pentagon2D
+│     ├─ Quadrilateral2D
+│     │  └─ Parallelogram2D
+│     │     └─ Rectangle2D
+│     └─ Triangle2D
+├─ AbstractElementGeometry3D
+│  ├─ Polyhedron3D
+│  │  ├─ Hexahedron3D
+│  │  │  └─ Parallelepiped3D
+│  │  │     └─ RectangularCuboid3D
+│  │  ├─ Prism3D
+│  │  │  └─ TrianglePrism3D
+│  │  └─ Tetrahedron3D
+│  └─ Sphere3D
+└─ AbstractElementGeometry4D
+   ├─ HyperCube4D
+   └─ Polychoron4D

    API

    diff --git a/v1.2.2/extendablegrid/index.html b/v1.2.2/extendablegrid/index.html new file mode 100644 index 00000000..35a9f9ba --- /dev/null +++ b/v1.2.2/extendablegrid/index.html @@ -0,0 +1,120 @@ + +Extendable grid · ExtendableGrids.jl

    Extendable grid

    An ExtendableGrid in form of a dictionary with types as keys and type stable value access. This means that grid components are accessed as dict entries, e.g. grid[Coordinates] . The rationale of this approach is explained here.

    Notations

    A grid is assumed to be a subset of components of a polyhedral complex in d-dimensional space. We distinguish the following element classes characterized by their dimension:

    Element classMeaning
    Node0-dimensional node
    Edge1-dimensional line connecting two neigboring nodes
    Facecodimension 1 object separating a cell from outer space or neigboring cell
    Cellcodimension 0 object
    BFaceFace situated at inner or domain boundary
    Regionnumber to be used to characterize subdomains, contacts etc.

    Grid components

    Grid components are accessed like Dict entries, the keys must be subtypes of AbstractGridComponent.

    Basic set of grid components

    Upon construction, an ExtendableGrid needs to be provided with the basic set of grid components denoted by the following component type keys:

    Component type keyMeaning
    CoordinatesCoordinates of the vertices of the grid cells
    CellNodesAdjacency describing the nodes of grid cell
    CellGeometriesAbstract array of subtypes of AbstractElementGeometry describing the geometry of each cell
    CellRegionsAbstract array of integers describing region numbers
    BFaceNodesAdjacency structure describing the nodes corresponding to each grid boundary face
    BFaceGeometriesAbstract array of subtypes of AbstractElementGeometry describing the geometry of each boundary face
    BFaceRegionsAbstract array of integers describig region numbers
    CoordinateSystemAbstract type describing the coordinate system to be used

    Hierarchy of component type keys

    The list of components can be printed using the gridcomponents method.

    AbstractGridComponent
+├─ AbstractElementGeometries
+│  ├─ BEdgeGeometries
+│  ├─ BFaceGeometries
+│  ├─ CellGeometries
+│  ├─ EdgeGeometries
+│  ├─ FaceGeometries
+│  ├─ UniqueBEdgeGeometries
+│  ├─ UniqueBFaceGeometries
+│  ├─ UniqueCellGeometries
+│  ├─ UniqueEdgeGeometries
+│  └─ UniqueFaceGeometries
+├─ AbstractElementRegions
+│  ├─ BEdgeRegions
+│  ├─ BFaceRegions
+│  ├─ CellRegions
+│  ├─ EdgeRegions
+│  └─ FaceRegions
+├─ AbstractGridAdjacency
+│  ├─ BEdgeAssemblyGroups
+│  ├─ BEdgeNodes
+│  ├─ BFaceAssemblyGroups
+│  ├─ BFaceCells
+│  ├─ BFaceEdges
+│  ├─ BFaceNodes
+│  ├─ CellAssemblyGroups
+│  ├─ CellEdgeSigns
+│  ├─ CellEdges
+│  ├─ CellFaceOrientations
+│  ├─ CellFaceSigns
+│  ├─ CellFaces
+│  ├─ CellNodes
+│  ├─ EdgeAssemblyGroups
+│  ├─ EdgeCells
+│  ├─ EdgeNodes
+│  ├─ FaceAssemblyGroups
+│  ├─ FaceCells
+│  ├─ FaceEdgeSigns
+│  ├─ FaceEdges
+│  └─ FaceNodes
+├─ AbstractGridFloatArray1D
+│  ├─ BEdgeVolumes
+│  ├─ BFaceVolumes
+│  ├─ CellVolumes
+│  ├─ EdgeVolumes
+│  ├─ FaceVolumes
+│  ├─ XCoordinates
+│  ├─ YCoordinates
+│  └─ ZCoordinates
+├─ AbstractGridFloatArray2D
+│  ├─ Coordinates
+│  ├─ EdgeTangents
+│  ├─ FaceNormals
+│  └─ VoronoiFaceCenters
+├─ AbstractGridIntegerArray1D
+│  ├─ BEdgeEdges
+│  ├─ BFaceCellPos
+│  ├─ BFaceFaces
+│  ├─ CellParents
+│  ├─ NodeInParent
+│  └─ NodePatchGroups
+├─ AbstractGridIntegerArray2D
+├─ BFaceNormals
+├─ CoordinateSystem
+├─ AbstractGridFloatConstant
+├─ AbstractGridIntegerConstant
+│  ├─ NumBEdgeRegions
+│  ├─ NumBFaceRegions
+│  └─ NumCellRegions
+└─ ParentGrid

    Additional components

    Additional components can be added by defining a subtype of AbstractGridComponent or a fitting subtype thereof, and assigning the value to the corresponding Dict entry:

    g=simplexgrid([1,2,3,4.0])
+abstract type MyComponent <: AbstractGridComponent end
+g[MyComponent]=13
+show(g)
    ExtendableGrid{Float64, Int32};
+dim: 1 nodes: 4 cells: 3 bfaces: 2

    Alternatively, component creation can be perfomed lazily. For this purpose one needs to define an instantiate method:

    abstract type NodeCells <: AbstractGridAdjacency end
+ExtendableGrids.instantiate(grid, ::Type{NodeCells})=atranspose(grid[CellNodes])
+g=simplexgrid([1,2,3,4.0])
+show(g[NodeCells])
    1
+1 2
+2 3
+3

    Grid API

    Base.delete! — Method
    delete!(
+    grid::ExtendableGrid,
+    T::Type{<:AbstractGridComponent}
+) -> Dict{Type{<:AbstractGridComponent}, Any}
+

    Remove grid component

    source
    Base.get! — Method
    get!(
+    grid::ExtendableGrid,
+    T::Type{<:AbstractGridComponent}
+) -> Any
+

    To be called by getindex. This triggers lazy creation of non-existing gridcomponents

    source
    Base.getindex — Method
    Base.getindex(grid::ExtendableGrid,T::Type{<:AbstractGridComponent})

    Generic method for obtaining grid component.

    This method is mutating in the sense that non-existing grid components are created on demand.

    Due to the fact that components are stored as Any the return value triggers type instability. To prevent this, specialized methods must be (and are) defined.

    source
    Base.haskey — Method
    haskey(g::ExtendableGrid, k) -> Bool
+

    Check if key is in grid

    source
    Base.keys — Method
    keys(
+    g::ExtendableGrid
+) -> Base.KeySet{Type{<:AbstractGridComponent}, Dict{Type{<:AbstractGridComponent}, Any}}
+

    Keys in grid

    source
    Base.map — Method
    map(f::Function, grid::ExtendableGrid) -> Any
+

    Map a function onto node coordinates of grid

    source
    Base.setindex! — Method
    setindex!(
+    grid::ExtendableGrid,
+    v,
+    T::Type{<:AbstractGridComponent}
+) -> Any
+

    Set new grid component

    source
    ExtendableGrids.seemingly_equal — Method
    seemingly_equal(grid1, grid2; sort=false, confidence=:full

    Recursively check seeming equality of two grids. Seemingly means that long arrays are only compared via random samples.

    Keyword args:

    • sort: if true, sort grid points
    • confidence: Confidence level:
      • :low : Point numbers etc are the same
      • :full : all arrays are equal (besides the coordinate array, the arrays only have to be equal up to permutations)
    source
    ExtendableGrids.veryform — Method
    veryform(
+    grid::ExtendableGrid,
+    v,
+    _::Type{<:AbstractGridComponent}
+) -> Any
+

    Default veryform method.

    "veryform" means "verify and/or transform" and is called to check and possibly transform components to be added to the grid via setindex!.

    The default method just passes data through.

    source
    ExtendableGrids.veryform — Method
    veryform(grid::ExtendableGrid{Tc,Ti},v,T::Type{<:AbstractGridAdjacency}) where{Tc,Ti}

    Check proper type of adjacencies upon insertion

    source
    diff --git a/v1.2.2/gmsh/index.html b/v1.2.2/gmsh/index.html new file mode 100644 index 00000000..7d4fe407 --- /dev/null +++ b/v1.2.2/gmsh/index.html @@ -0,0 +1,2 @@ + +Gmsh interoperability · ExtendableGrids.jl

    Gmsh interoperability

    This functionality is in beta stage. Breaking changes for this API are considered non-breaking for the package. Therefore, these functions are not exported yet.

    API

    These methods become available via a package extension which is loaded together with Gmsh.jl. See the general gmsh documentation, the Gmsh reference manual and the Gmsh Julia API source code for information.

    ExtendableGrids.simplexgrid_from_gmsh — Function
    simplexgrid_from_gmsh(filename::String; incomplete=false, Tc=Float32, Ti=Int32)

    The msh file is read and a SimplexGrid is created. The mesh can also contain an incomplete grid. For this, the function has to be called with $incomplete=true$. 'incomplete' means that the grid only consists of nodes and cells, it does not have a boundary. We also do not try to read the physical groups for those grids. Tc is the type of coordinates, Ti is the index type.

    source
    simplexgrid_from_gmsh(mod::Module; incomplete=false, Tc=Float32, Ti=Int32)

    The mesh contained in the gmsh module is converted to a SimplexGrid. The mesh can also contain an incomplete grid. For this, the function has to be called with $incomplete=true$. 'incomplete' means that the grid only consists of nodes and cells, it does not have a boundary. We also do not try to read the physical groups for those grids. Tc is the type of coordinates, Ti is the index type.

    source
    ExtendableGrids.simplexgrid_to_gmsh — Function
    simplexgrid_to_gmsh(g::ExtendableGrid; filename::String="")

    The SimplexGrid 'g' is loaded into a gmsh module. If a string (not "") is passed via 'filename', the mesh is written into this file.

    source
    ExtendableGrids.mixedgrid_from_gmsh — Function
    mixedgrid_from_gmsh(filename::String; Tc=Float32, Ti=Int32)

    The msh file is read and an ExtendableGrid is created. This only works for dim=2 grids and the orientation may be wrong. Tc is the type of coordinates, Ti is the index type.

    source
    mixedgrid_from_gmsh(mod::Module; Tc=Float32, Ti=Int32)

    The mesh contained in the gmsh module is converted to an ExtendableGrid. Tc is the type of coordinates, Ti is the index type.

    source
    ExtendableGrids.mixedgrid_to_gmsh — Function
    mixedgrid_to_gmsh(g::ExtendableGrid; filename::String="")

    The ExtendableGrid 'g' is loaded into a gmsh module. If a string (not "") is passed via 'filename', the mesh is written into this file.

    source
    diff --git a/v1.2.2/gridconstructors/index.html b/v1.2.2/gridconstructors/index.html new file mode 100644 index 00000000..1514f060 --- /dev/null +++ b/v1.2.2/gridconstructors/index.html @@ -0,0 +1,15 @@ + +Grid constructors · ExtendableGrids.jl

    Grid constructors

    API

    ExtendableGrids.glue — Method

    function glue(g1,g2; g1regions=1:numbfaceregions(g1), g2regions=1:numbfaceregions(g2), interface=0, tol=1.0e-10)

    Merge two grids along their common boundary facets.

    • g1: First grid to be merged
    • g2: Second grid to be merged
    • g1regions: boundary regions to be used from grid1. Default: all.
    • g2regions: boundary regions to be used from grid2. Default: all.
    • interface: if nonzero, create interface region in new grid, otherwise, ignore
    • tol: Distance below which two points are seen as identical. Default: 1.0e-10

    Deprecated:

    • breg: old notation for interface
    source
    ExtendableGrids.simplexgrid — Method
    simplexgrid(X,Y,Z; bregions=[1,2,3,4,5,6],cellregion=1)

    Constructor for 3D grid from coordinate arrays. Boundary region numbers:

    locationnumber
    south1
    east2
    north3
    west4
    bottom5
    top6

    The keyword arguments allow to overwrite the default region numbers.

    source
    ExtendableGrids.simplexgrid — Method
    simplexgrid(X,Y; bregions=[1,2,3,4],cellregion=1)

    Constructor for 2D grid from coordinate arrays.

    Boundary region numbers count counterclockwise:

    locationnumber
    south1
    east2
    north3
    west4

    The keyword arguments allow to overwrite the default region numbers.

    source
    ExtendableGrids.simplexgrid — Method
    simplexgrid(X; bregions=[1,2],cellregion=1)

    Constructor for 1D grid.

    Construct 1D grid from an array of node cordinates. It creates two boundary regions with index 1 at the left end and index 2 at the right end by default.

    The keyword arguments allow to overwrite the default region numbers.

    Primal grid holding unknowns: marked by o, dual grid marking control volumes: marked by |.

     o-----o-----o-----o-----o-----o-----o-----o-----o
+ |--|-----|-----|-----|-----|-----|-----|-----|--|
    source
    ExtendableGrids.simplexgrid — Method
    simplexgrid(grid2d::ExtendableGrid, coordZ; bot_offset=0,cell_offset=0,top_offset=0, bface_offset=0)

    Create tensor product of 2D grid and 1D coordinate array.

    Cellregions and outer facet regions are taken over from 2D grid and added to cell_offset and bface_offset, respectively. Top an bottom facet regions are detected from the cell regions and added to bot_offset resp. top_offset.

    source
    ExtendableGrids.simplexgrid — Method
    function simplexgrid(coord::Array{Tc,2},
+                     cellnodes::Array{Ti,2},
+                     cellregions,
+                     bfacenodes,
+                     bfaceregions
+                     ) where {Tc,Ti}

    Create d-dimensional simplex grid from five arrays.

    • coord: d $\times$ n_points matrix of coordinates
    • cellnodes: d+1 $\times$ n_tri matrix of triangle - point incidence
    • cellregions: n_tri vector of cell region markers
    • bfacenodes: d $\times$ n_bf matrix of boundary facet - point incidences
    • bfaceregions: n_bf vector of boundary facet region markers

    Coordinate type Tc index type Ti are detected from the first two parameters. cellregions, bfaceregions, bfacenodes are converted to have the same element type as cellnodes.

    source
    ExtendableGrids.simplexgrid — Method
    function simplexgrid(coord::Array{Tc,2},
+                     cellnodes::Array{Ti,2},
+                     cellregions,
+                     bfacenodes,
+                     bfaceregions,
+                     bedgenodes,
+                     bedgeregions
+                     ) where {Tc,Ti}

    Create simplex grid from coordinates, cell-nodes-adjancency, cell-region-numbers, boundary-face-nodes adjacency, boundary-face-region-numbers, boundary-edge-nodes, and boundary-edge-region-numbers arrays.

    The index type Ti is detected from cellnodes, all other arrays besides coord are converted to this index type.

    source
    ExtendableGrids.grid_triangle — Method
        Triangle(coords) -> ExtendableGrid{T,Int32}

    Generates a single triangle with the given coordinates, that should be a 2 x 3 array with the coordinates of the three vertices, e.g. coords = [0.0 0.0; 1.0 0.0; 0.0 1.0]'.

    source
    ExtendableGrids.reference_domain — Function
        reference_domain(EG::Type{<:AbstractElementGeometry}, T::Type{<:Real} = Float64; scale = [1,1,1], shift = [0,0,0]) -> ExtendableGrid{T,Int32}

    Generates an ExtendableGrid{T,Int32} for the reference domain of the specified Element Geometry. With scale and shift the coordinates can be manipulated.

    source
    diff --git a/v1.2.2/index.html b/v1.2.2/index.html new file mode 100644 index 00000000..bbb096e4 --- /dev/null +++ b/v1.2.2/index.html @@ -0,0 +1,2 @@ + +Home · ExtendableGrids.jl

    Extendable grid data container for numerical simulations

    Build status

    Provide container structure ExtendableGrid with type stable content access and lazy content creation holding data for discretization grids for finite element and finite volume methods. Used by VoronoiFVM and GradientRobustMultiPhysics, a package for novel, gradient robust finite element methods.

    Additional functionality:

    • Tools to create tensor product grids

    • Tools for grid modification

    • Gmsh.jl extension

    Companion packages:

    • Visualization of these grids and of functions on them is avaialable in GridVisualize.jl.
    • The differently licensed SimplexGridFactory contains an API which allows to create ExtendableGrid objects with Triangulate.jl which wraps the Triangle mesh generator by J. Shewchuk and TetGen.jl which wraps the TetGen mesh generator by H. Si.
    diff --git a/v1.2.2/more/index.html b/v1.2.2/more/index.html new file mode 100644 index 00000000..ea69de86 --- /dev/null +++ b/v1.2.2/more/index.html @@ -0,0 +1,3 @@ + +Derived adjacencies · ExtendableGrids.jl

    Derived adjacencies

    API

    ExtendableGrids.prepare_edges! — Method
    prepare_edges!(grid)
+

    Prepare edge adjacencies (celledges, edgecells, edgenodes)

    Currently depends on ExtendableSparse, we may want to remove this adjacency.

    source
    diff --git a/v1.2.2/refinement/index.html b/v1.2.2/refinement/index.html new file mode 100644 index 00000000..8680c1da --- /dev/null +++ b/v1.2.2/refinement/index.html @@ -0,0 +1,17 @@ + +Mesh refinement · ExtendableGrids.jl

    Mesh refinement

    API

    ExtendableGrids.RGB_refine — Method
    RGB_refine(
+    source_grid::ExtendableGrid{T, K},
+    facemarkers::Vector{Bool}
+) -> ExtendableGrid
+

    generates a new ExtendableGrid by red-green-blue mesh refinement of triangular meshes, see e.g.

    Carstensen, C. –An Adaptive Mesh-Refining Algorithm Allowing for an H^1 Stable L^2 Projection onto Courant Finite Element Spaces– Constr Approx 20, 549–564 (2004). https://doi.org/10.1007/s00365-003-0550-5

    The bool array facemarkers determines which faces should be bisected. Note, that a closuring is performed such that the first face in every triangle with a marked face is also refined.

    source
    ExtendableGrids.barycentric_refine — Method
    barycentric_refine(
+    source_grid::ExtendableGrid{T, K}
+) -> ExtendableGrid
+

    generates a new ExtendableGrid by barycentric refinement of each cell in the source grid

    barycentric refinement is available for these ElementGeometries

    • Quadrilateral2D (first split into Triangle2D)
    • Triangle2D
    source
    ExtendableGrids.split_grid_into — Method
    split_grid_into(
+    source_grid::ExtendableGrid{T, K},
+    targetgeometry::Type{<:AbstractElementGeometry}
+) -> ExtendableGrid
+

    generates a new ExtendableGrid by splitting each cell into subcells of the specified targetgeometry

    split rules exist for

    • Quadrilateral2D into Triangle2D
    • Hexahedron3D into Tetrahedron3D
    source
    ExtendableGrids.uniform_refine — Method
    uniform_refine(
+    source_grid::ExtendableGrid{T, K};
+    store_parents
+) -> ExtendableGrid
+

    generates a new ExtendableGrid by uniform refinement of each cell in the given grid

    uniform refinement rules are available for these AbstractElementGeometries:

    • Line1D (bisection into two subsegments)
    • Triangle2D (red refinement into four subtriangles)
    • Quadrilateral2D (into four subquadrilaterals)
    • Tetrahedron (into eight subtetrahedrons)
    • Hexahedron (into eight subhexahedrons)

    if multiple geometries are in the mesh uniform refinement will only work if all refinement rules refine faces and edges (in 3D) equally (so no hanging nodes are created)

    source
    diff --git a/v1.2.2/regionedit/index.html b/v1.2.2/regionedit/index.html new file mode 100644 index 00000000..9f489ab4 --- /dev/null +++ b/v1.2.2/regionedit/index.html @@ -0,0 +1,25 @@ + +Region editing · ExtendableGrids.jl

    Region editing

    Tools for editing grid region numbers

    ExtendableGrids.bfacemask! — Function
    bfacemask!(grid::ExtendableGrid,
+                maskmin,
+                maskmax,
+                ireg;
+                allow_new=true,
+                tol=1.0e-10)

    Edit region numbers of grid boundary facets via rectangular mask. If allow_new is true (default), new facets are added.

    ireg may be an integer or a function ireg(current_region).

    A zero region number removes boundary faces.

    Examples: Rectangle-with-multiple-regions

    source
    ExtendableGrids.rect! — Function
    rect!(grid,maskmin,maskmax; 
+      region=1, 
+      bregion=1, 
+      bregions=nothing, 
+      tol=1.0e-10)

    Place a rectangle into a rectangular grid. It places a cellmask according to maskmin and maskmax, and introduces boundary faces via `bfacesmask! at all sides of the mask area. It is checked that the coordinate values in the mask match (with tolerance) corresponding directional coordinates of the grid.

    If bregions is given it is assumed to be a vector corresponding to the number of sides, im the sequence w,e in 1D. s,e,n,w in 2D and s,e,n,w,b,t in 3D.

    bregion or elements of bregions can be numbers or functions ireg(current_region).

    Examples: Subgrid-from-rectangle, Rect2d-with-bregion-function, Cross3d

    source
    ExtendableGrids.bedgemask! — Function
    bedgemask!(
+    grid::ExtendableGrid,
+    xa,
+    xb,
+    ireg::Int64;
+    tol
+) -> ExtendableGrid
+

    Edit region numbers of grid boundary edges via line mask. This only works for 3D grids.

    source
    diff --git a/v1.2.2/script_examples/cross3d.svg b/v1.2.2/script_examples/cross3d.svg new file mode 100644 index 00000000..2c7aca84 --- /dev/null +++ b/v1.2.2/script_examples/cross3d.svg @@ -0,0 +1,9 @@ + + + + + + + + + diff --git a/v1.2.2/script_examples/examples1d.jl b/v1.2.2/script_examples/examples1d.jl new file mode 100644 index 00000000..60a687e1 --- /dev/null +++ b/v1.2.2/script_examples/examples1d.jl @@ -0,0 +1,69 @@ +# 1D Grid examples +# =============== +using ExtendableGrids + +# ## Interval from vector +# +function interval_from_vector() + X = collect(0:0.05:1) + grid = simplexgrid(X) +end +# ![](interval_from_vector.svg) + +# +# ## Interval with local refinement +# +function interval_localref() + XLeft = geomspace(0.0, 0.5, 0.1, 0.01) + XRight = geomspace(0.5, 1.0, 0.01, 0.1) + X = glue(XLeft, XRight) + grid = simplexgrid(X) +end +# ![](interval_localref.svg) + +# +# ## Interval with multiple regions +# +function interval_multiregion() + X = collect(0:0.05:1) + grid = simplexgrid(X) + cellmask!(grid, [0.0], [0.5], 3) + bfacemask!(grid, [0.5], [0.5], 4) + grid +end +# ![](interval_multiregion.svg) +# +# ## Multiple regions and subgrid +# +function interval_subgrid() + X = collect(0:0.01:1) + grid = simplexgrid(X) + bfacemask!(grid, [0.5], [0.5], 3) + cellmask!(grid, [0.0], [0.25], 2) + cellmask!(grid, [0.20], [0.5], 3) + subgrid(grid, [2, 3]) +end +# ![](interval_subgrid.svg) +# ## CI callbacks for [ExampleJuggler.jl](https://github.com/j-fu/ExampleJuggler.jl) +# Unit tests +using Test + +function runtests() + @test numbers_match(interval_from_vector(), 21, 20, 2) + @test numbers_match(interval_localref(), 27, 26, 2) + @test numbers_match(interval_multiregion(), 21, 20, 3) + @test numbers_match(interval_subgrid(), 51, 50, 2) +end + +# Plot generation +using GridVisualize +function generateplots(picdir; Plotter = nothing) + if isdefined(Plotter, :Makie) + size = (500, 200) + legend = :rt + Plotter.save(joinpath(picdir, "interval_from_vector.svg"), gridplot(interval_from_vector(); Plotter, size, legend)) + Plotter.save(joinpath(picdir, "interval_localref.svg"), gridplot(interval_localref(); Plotter, size, legend)) + Plotter.save(joinpath(picdir, "interval_multiregion.svg"), gridplot(interval_multiregion(); Plotter, size, legend)) + Plotter.save(joinpath(picdir, "interval_subgrid.svg"), gridplot(interval_subgrid(); Plotter, size, legend)) + end +end diff --git a/v1.2.2/script_examples/examples1d/index.html b/v1.2.2/script_examples/examples1d/index.html new file mode 100644 index 00000000..897396ca --- /dev/null +++ b/v1.2.2/script_examples/examples1d/index.html @@ -0,0 +1,40 @@ + +examples1d · ExtendableGrids.jl

    1D Grid examples

    using ExtendableGrids

    Interval from vector

    function interval_from_vector()
+    X = collect(0:0.05:1)
+    grid = simplexgrid(X)
+end

    Interval with local refinement

    function interval_localref()
+    XLeft = geomspace(0.0, 0.5, 0.1, 0.01)
+    XRight = geomspace(0.5, 1.0, 0.01, 0.1)
+    X = glue(XLeft, XRight)
+    grid = simplexgrid(X)
+end

    Interval with multiple regions

    function interval_multiregion()
+    X = collect(0:0.05:1)
+    grid = simplexgrid(X)
+    cellmask!(grid, [0.0], [0.5], 3)
+    bfacemask!(grid, [0.5], [0.5], 4)
+    grid
+end

    Multiple regions and subgrid

    function interval_subgrid()
+    X = collect(0:0.01:1)
+    grid = simplexgrid(X)
+    bfacemask!(grid, [0.5], [0.5], 3)
+    cellmask!(grid, [0.0], [0.25], 2)
+    cellmask!(grid, [0.20], [0.5], 3)
+    subgrid(grid, [2, 3])
+end

    CI callbacks for ExampleJuggler.jl

    Unit tests

    using Test
+
+function runtests()
+    @test numbers_match(interval_from_vector(), 21, 20, 2)
+    @test numbers_match(interval_localref(), 27, 26, 2)
+    @test numbers_match(interval_multiregion(), 21, 20, 3)
+    @test numbers_match(interval_subgrid(), 51, 50, 2)
+end

    Plot generation

    using GridVisualize
+function generateplots(picdir; Plotter = nothing)
+    if isdefined(Plotter, :Makie)
+        size = (500, 200)
+        legend = :rt
+        Plotter.save(joinpath(picdir, "interval_from_vector.svg"), gridplot(interval_from_vector(); Plotter, size, legend))
+        Plotter.save(joinpath(picdir, "interval_localref.svg"), gridplot(interval_localref(); Plotter, size, legend))
+        Plotter.save(joinpath(picdir, "interval_multiregion.svg"), gridplot(interval_multiregion(); Plotter, size, legend))
+        Plotter.save(joinpath(picdir, "interval_subgrid.svg"), gridplot(interval_subgrid(); Plotter, size, legend))
+    end
+end

    This page was generated using Literate.jl.

    diff --git a/v1.2.2/script_examples/examples2d.jl b/v1.2.2/script_examples/examples2d.jl new file mode 100644 index 00000000..03dcff74 --- /dev/null +++ b/v1.2.2/script_examples/examples2d.jl @@ -0,0 +1,131 @@ +# 2D Grid examples +# =============== +# +using Triangulate, ExtendableGrids, SimplexGridFactory + +# ## Rectangle +function rectangle() + X = collect(0:0.05:1) + Y = collect(0:0.05:1) + simplexgrid(X, X) +end +# ![](rectangle.svg) +# +# ## Rectangle with local refinement +# +function rectangle_localref() + hmin = 0.01 + hmax = 0.1 + XLeft = geomspace(0.0, 0.5, hmax, hmin) + XRight = geomspace(0.5, 1.0, hmin, hmax) + X = glue(XLeft, XRight) + simplexgrid(X, X) +end +# ![](rectangle_localref.svg) + +# +# ## Rectangle with multiple regions +# +function rectangle_multiregion() + X = collect(0:0.05:1) + Y = collect(0:0.05:1) + grid = simplexgrid(X, Y) + cellmask!(grid, [0.0, 0.0], [1.0, 0.5], 3) + bfacemask!(grid, [0.0, 0.0], [0.0, 0.5], 5) + bfacemask!(grid, [1.0, 0.0], [1.0, 0.5], 6) + bfacemask!(grid, [0.0, 0.5], [1.0, 0.5], 7) +end +# ![](rectangle_multiregion.svg) + +# +# ## Subgrid from rectangle +# +function rectangle_subgrid() + X = collect(0:0.05:1) + Y = collect(0:0.05:1) + grid = simplexgrid(X, Y) + rect!(grid, [0.25, 0.25], [0.75, 0.75]; region = 2, bregion = 5) + subgrid(grid, [1]) +end +# ![](rectangle_subgrid.svg) + +# +# ## Rect2d with bregion function +# +# Here, we use function as bregion parameter - this allows to +# have no bfaces at the interface between the two rects. +function rect2d_bregion_function() + X = collect(0:0.5:10) + Y = collect(0:0.5:10) + grid = simplexgrid(X, Y) + rect!(grid, [5, 4], [9, 6]; region = 2, bregions = [5, 5, 5, 5]) + + rect!(grid, [4, 2], [5, 8]; region = 2, bregion = cur -> cur == 5 ? 0 : 8) + + subgrid(grid, [2]) +end +# ![](rect2d_bregion_function.svg) + +function sorted_subgrid(; maxvolume = 0.01) + builder = SimplexGridBuilder(; Generator = Triangulate) + + p1 = point!(builder, 0, 0) + p2 = point!(builder, 1, 0) + p3 = point!(builder, 1, 2) + p4 = point!(builder, 0, 1) + p5 = point!(builder, -1, 2) + + facetregion!(builder, 1) + facet!(builder, p1, p2) + facetregion!(builder, 2) + facet!(builder, p2, p3) + facetregion!(builder, 3) + facet!(builder, p3, p4) + facetregion!(builder, 4) + facet!(builder, p4, p5) + facetregion!(builder, 5) + facet!(builder, p5, p1) + + g = simplexgrid(builder; maxvolume) + sg = subgrid(g, [2]; boundary = true, transform = (a, b) -> a[1] = b[2]) + f = map((x, y) -> sin(3x) * cos(3y), g) + sf = view(f, sg) + g, sg, sf +end +# ![](sorted_subgrid.svg) +# ## CI callbacks for [ExampleJuggler.jl](https://github.com/j-fu/ExampleJuggler.jl) +# Unit tests +using Test +function runtests() + @test numbers_match(rectangle(), 441, 800, 80) + @test numbers_match(rectangle_localref(), 729, 1352, 104) + @test numbers_match(rectangle_multiregion(), 441, 800, 100) + @test numbers_match(rectangle_subgrid(), 360, 600, 120) + @test numbers_match(rect2d_bregion_function(), 79, 112, 44) + + g, sg, sf = sorted_subgrid() + @test numbers_match(g, 187, 306, 66) + @test numbers_match(sg, 17, 16, 0) + @test issorted(view(sg[Coordinates], 1, :)) +end + +# Plot generation +using GridVisualize +function generateplots(picdir; Plotter = nothing) + if isdefined(Plotter, :Makie) + size = (300, 300) + Plotter.save(joinpath(picdir, "rectangle.svg"), gridplot(rectangle(); Plotter, size)) + Plotter.save(joinpath(picdir, "rectangle_localref.svg"), gridplot(rectangle_localref(); Plotter, size)) + Plotter.save(joinpath(picdir, "rectangle_multiregion.svg"), gridplot(rectangle_multiregion(); Plotter, size)) + Plotter.save(joinpath(picdir, "rectangle_subgrid.svg"), gridplot(rectangle_subgrid(); Plotter, size)) + Plotter.save(joinpath(picdir, "rect2d_bregion_function.svg"), gridplot(rect2d_bregion_function(); Plotter, size)) + + g, sg, sf = sorted_subgrid() + p = GridVisualizer(; Plotter, layout = (1, 3), size = (800, 300)) + gridplot!(p[1, 1], g) + gridplot!(p[1, 2], sg) + scalarplot!(p[1, 3], sg, sf) + fname = joinpath(picdir, "sorted_subgrid.svg") + Plotter.save(fname, reveal(p)) + end +end diff --git a/v1.2.2/script_examples/examples2d/index.html b/v1.2.2/script_examples/examples2d/index.html new file mode 100644 index 00000000..37dd068e --- /dev/null +++ b/v1.2.2/script_examples/examples2d/index.html @@ -0,0 +1,91 @@ + +examples2d · ExtendableGrids.jl

    2D Grid examples

    using Triangulate, ExtendableGrids, SimplexGridFactory

    Rectangle

    function rectangle()
+    X = collect(0:0.05:1)
+    Y = collect(0:0.05:1)
+    simplexgrid(X, X)
+end

    Rectangle with local refinement

    function rectangle_localref()
+    hmin = 0.01
+    hmax = 0.1
+    XLeft = geomspace(0.0, 0.5, hmax, hmin)
+    XRight = geomspace(0.5, 1.0, hmin, hmax)
+    X = glue(XLeft, XRight)
+    simplexgrid(X, X)
+end

    Rectangle with multiple regions

    function rectangle_multiregion()
+    X = collect(0:0.05:1)
+    Y = collect(0:0.05:1)
+    grid = simplexgrid(X, Y)
+    cellmask!(grid, [0.0, 0.0], [1.0, 0.5], 3)
+    bfacemask!(grid, [0.0, 0.0], [0.0, 0.5], 5)
+    bfacemask!(grid, [1.0, 0.0], [1.0, 0.5], 6)
+    bfacemask!(grid, [0.0, 0.5], [1.0, 0.5], 7)
+end

    Subgrid from rectangle

    function rectangle_subgrid()
+    X = collect(0:0.05:1)
+    Y = collect(0:0.05:1)
+    grid = simplexgrid(X, Y)
+    rect!(grid, [0.25, 0.25], [0.75, 0.75]; region = 2, bregion = 5)
+    subgrid(grid, [1])
+end

    Rect2d with bregion function

    Here, we use function as bregion parameter - this allows to have no bfaces at the interface between the two rects.

    function rect2d_bregion_function()
+    X = collect(0:0.5:10)
+    Y = collect(0:0.5:10)
+    grid = simplexgrid(X, Y)
+    rect!(grid, [5, 4], [9, 6]; region = 2, bregions = [5, 5, 5, 5])
+
+    rect!(grid, [4, 2], [5, 8]; region = 2, bregion = cur -> cur == 5 ? 0 : 8)
+
+    subgrid(grid, [2])
+end

    function sorted_subgrid(; maxvolume = 0.01)
+    builder = SimplexGridBuilder(; Generator = Triangulate)
+
+    p1 = point!(builder, 0, 0)
+    p2 = point!(builder, 1, 0)
+    p3 = point!(builder, 1, 2)
+    p4 = point!(builder, 0, 1)
+    p5 = point!(builder, -1, 2)
+
+    facetregion!(builder, 1)
+    facet!(builder, p1, p2)
+    facetregion!(builder, 2)
+    facet!(builder, p2, p3)
+    facetregion!(builder, 3)
+    facet!(builder, p3, p4)
+    facetregion!(builder, 4)
+    facet!(builder, p4, p5)
+    facetregion!(builder, 5)
+    facet!(builder, p5, p1)
+
+    g = simplexgrid(builder; maxvolume)
+    sg = subgrid(g, [2]; boundary = true, transform = (a, b) -> a[1] = b[2])
+    f = map((x, y) -> sin(3x) * cos(3y), g)
+    sf = view(f, sg)
+    g, sg, sf
+end

    CI callbacks for ExampleJuggler.jl

    Unit tests

    using Test
+function runtests()
+    @test numbers_match(rectangle(), 441, 800, 80)
+    @test numbers_match(rectangle_localref(), 729, 1352, 104)
+    @test numbers_match(rectangle_multiregion(), 441, 800, 100)
+    @test numbers_match(rectangle_subgrid(), 360, 600, 120)
+    @test numbers_match(rect2d_bregion_function(), 79, 112, 44)
+
+    g, sg, sf = sorted_subgrid()
+    @test numbers_match(g, 187, 306, 66)
+    @test numbers_match(sg, 17, 16, 0)
+    @test issorted(view(sg[Coordinates], 1, :))
+end

    Plot generation

    using GridVisualize
+function generateplots(picdir; Plotter = nothing)
+    if isdefined(Plotter, :Makie)
+        size = (300, 300)
+        Plotter.save(joinpath(picdir, "rectangle.svg"), gridplot(rectangle(); Plotter, size))
+        Plotter.save(joinpath(picdir, "rectangle_localref.svg"), gridplot(rectangle_localref(); Plotter, size))
+        Plotter.save(joinpath(picdir, "rectangle_multiregion.svg"), gridplot(rectangle_multiregion(); Plotter, size))
+        Plotter.save(joinpath(picdir, "rectangle_subgrid.svg"), gridplot(rectangle_subgrid(); Plotter, size))
+        Plotter.save(joinpath(picdir, "rect2d_bregion_function.svg"), gridplot(rect2d_bregion_function(); Plotter, size))
+
+        g, sg, sf = sorted_subgrid()
+        p = GridVisualizer(; Plotter, layout = (1, 3), size = (800, 300))
+        gridplot!(p[1, 1], g)
+        gridplot!(p[1, 2], sg)
+        scalarplot!(p[1, 3], sg, sf)
+        fname = joinpath(picdir, "sorted_subgrid.svg")
+        Plotter.save(fname, reveal(p))
+    end
+end

    This page was generated using Literate.jl.

    diff --git a/v1.2.2/script_examples/examples3d.jl b/v1.2.2/script_examples/examples3d.jl new file mode 100644 index 00000000..49364f63 --- /dev/null +++ b/v1.2.2/script_examples/examples3d.jl @@ -0,0 +1,60 @@ +# 3D Grid examples +# =============== +# +using ExtendableGrids + +# ## Quadrilateral +function quadrilateral(; hx = 0.25, hy = 0.2, hz = 0.1) + X = collect(0:hx:1) + Y = collect(0:hy:1) + Z = collect(0:hz:1) + simplexgrid(X, Y, Z) +end +# ![](quadrilateral.svg) + +# ## Cross3d +function cross3d() + X = collect(0:0.1:1) + Y = collect(0:0.1:1) + Z = collect(0:0.1:1) + grid = simplexgrid(X, Y, Z) + + rect!(grid, (0, 0.4, 0), (1, 0.6, 0.2); region = 2, bregions = [1, 1, 1, 1, 2, 3]) + + rect!(grid, (0.4, 0, 0.2), (0.6, 1, 0.4); region = 2, bregions = [4, 4, 4, 4, (cur) -> cur == 3 ? 0 : 5, 6]) + + subgrid(grid, [2]) +end +# ![](cross3d.svg) +# ## CI callbacks for [ExampleJuggler.jl](https://github.com/j-fu/ExampleJuggler.jl) +# Unit tests + +function mask_bedges() + grid = quadrilateral(; hx = 0.25, hy = 0.25, hz = 0.25) + + bedgemask!(grid, [0.0, 0.0, 0.0], [0.0, 0.0, 1.0], 1) + bedgemask!(grid, [0.0, 0.0, 0.0], [0.0, 1.0, 0.0], 2) + bedgemask!(grid, [0.0, 1.0, 0.0], [0.0, 1.0, 1.0], 3) + bedgemask!(grid, [0.0, 0.0, 1.0], [0.0, 1.0, 1.0], 4) + bedgemask!(grid, [0.0, 1.0, 0.0], [0.0, 0.0, 1.0], 5) + + true +end + +using Test + +function runtests() + @test numbers_match(quadrilateral(), 330, 1200, 440) + @test mask_bedges() + @test numbers_match(cross3d(), 189, 480, 344) +end + +# Plot generation +using GridVisualize +function generateplots(picdir; Plotter = nothing) + if isdefined(Plotter, :Makie) + size = (400, 400) + Plotter.save(joinpath(picdir, "quadrilateral.svg"), gridplot(quadrilateral(); Plotter, size)) + Plotter.save(joinpath(picdir, "cross3d.svg"), gridplot(cross3d(); Plotter, size)) + end +end diff --git a/v1.2.2/script_examples/examples3d/index.html b/v1.2.2/script_examples/examples3d/index.html new file mode 100644 index 00000000..447acc73 --- /dev/null +++ b/v1.2.2/script_examples/examples3d/index.html @@ -0,0 +1,43 @@ + +examples3d · ExtendableGrids.jl

    3D Grid examples

    using ExtendableGrids

    Quadrilateral

    function quadrilateral(; hx = 0.25, hy = 0.2, hz = 0.1)
+    X = collect(0:hx:1)
+    Y = collect(0:hy:1)
+    Z = collect(0:hz:1)
+    simplexgrid(X, Y, Z)
+end

    Cross3d

    function cross3d()
+    X = collect(0:0.1:1)
+    Y = collect(0:0.1:1)
+    Z = collect(0:0.1:1)
+    grid = simplexgrid(X, Y, Z)
+
+    rect!(grid, (0, 0.4, 0), (1, 0.6, 0.2); region = 2, bregions = [1, 1, 1, 1, 2, 3])
+
+    rect!(grid, (0.4, 0, 0.2), (0.6, 1, 0.4); region = 2, bregions = [4, 4, 4, 4, (cur) -> cur == 3 ? 0 : 5, 6])
+
+    subgrid(grid, [2])
+end

    CI callbacks for ExampleJuggler.jl

    Unit tests

    function mask_bedges()
+    grid = quadrilateral(; hx = 0.25, hy = 0.25, hz = 0.25)
+
+    bedgemask!(grid, [0.0, 0.0, 0.0], [0.0, 0.0, 1.0], 1)
+    bedgemask!(grid, [0.0, 0.0, 0.0], [0.0, 1.0, 0.0], 2)
+    bedgemask!(grid, [0.0, 1.0, 0.0], [0.0, 1.0, 1.0], 3)
+    bedgemask!(grid, [0.0, 0.0, 1.0], [0.0, 1.0, 1.0], 4)
+    bedgemask!(grid, [0.0, 1.0, 0.0], [0.0, 0.0, 1.0], 5)
+
+    true
+end
+
+using Test
+
+function runtests()
+    @test numbers_match(quadrilateral(), 330, 1200, 440)
+    @test mask_bedges()
+    @test numbers_match(cross3d(), 189, 480, 344)
+end

    Plot generation

    using GridVisualize
+function generateplots(picdir; Plotter = nothing)
+    if isdefined(Plotter, :Makie)
+        size = (400, 400)
+        Plotter.save(joinpath(picdir, "quadrilateral.svg"), gridplot(quadrilateral(); Plotter, size))
+        Plotter.save(joinpath(picdir, "cross3d.svg"), gridplot(cross3d(); Plotter, size))
+    end
+end

    This page was generated using Literate.jl.

    diff --git a/v1.2.2/script_examples/gmsh.jl b/v1.2.2/script_examples/gmsh.jl new file mode 100644 index 00000000..500fbdd0 --- /dev/null +++ b/v1.2.2/script_examples/gmsh.jl @@ -0,0 +1,317 @@ +# Gmsh examples +# =============== + +using ExtendableGrids +using Gmsh: gmsh + +# +# [Example t1](https://gmsh.info/doc/texinfo/gmsh.html#t1) from the GMSH docs +# +function gmsh_t1() + gmsh.initialize() + gmsh.option.setNumber("General.Terminal", 1) + gmsh.model.add("t1") + + lc = 1e-2 + gmsh.model.geo.addPoint(0, 0, 0, lc, 1) + gmsh.model.geo.addPoint(0.1, 0, 0, lc, 2) + gmsh.model.geo.addPoint(0.1, 0.3, 0, lc, 3) + + p4 = gmsh.model.geo.addPoint(0, 0.3, 0, lc) + + gmsh.model.geo.addLine(1, 2, 1) + gmsh.model.geo.addLine(3, 2, 2) + gmsh.model.geo.addLine(3, p4, 3) + gmsh.model.geo.addLine(4, 1, p4) + + gmsh.model.geo.addCurveLoop([4, 1, -2, 3], 1) + gmsh.model.geo.addPlaneSurface([1], 1) + + gmsh.model.geo.synchronize() + + gmsh.model.addPhysicalGroup(0, [1, 2], 1) + gmsh.model.addPhysicalGroup(1, [1, 2], 2) + gmsh.model.addPhysicalGroup(2, [1], 6) + + gmsh.model.setPhysicalName(2, 6, "My surface") + + gmsh.model.mesh.generate(2) + grid = ExtendableGrids.simplexgrid_from_gmsh(gmsh.model) + gmsh.finalize() + grid +end +# ![](gmsh_t1.svg) + +# +# [Example t4](https://gmsh.info/doc/texinfo/gmsh.html#t4) from the GMSH docs +# +function gmsh_t4() + gmsh.initialize() + + gmsh.model.add("t4") + + cm = 1e-02 + e1 = 4.5 * cm; e2 = 6 * cm / 2; e3 = 5 * cm / 2 + h1 = 5 * cm; h2 = 10 * cm; h3 = 5 * cm; h4 = 2 * cm; h5 = 4.5 * cm + R1 = 1 * cm; R2 = 1.5 * cm; r = 1 * cm + Lc1 = 0.01 + Lc2 = 0.003 + + function hypot(a, b) + return sqrt(a * a + b * b) + end + + ccos = (-h5*R1 + e2 * hypot(h5, hypot(e2, R1))) / (h5*h5 + e2*e2) + ssin = sqrt(1 - ccos*ccos) + + factory = gmsh.model.geo + factory.addPoint(-e1-e2, 0 , 0, Lc1, 1) + factory.addPoint(-e1-e2, h1 , 0, Lc1, 2) + factory.addPoint(-e3-r , h1 , 0, Lc2, 3) + factory.addPoint(-e3-r , h1+r , 0, Lc2, 4) + factory.addPoint(-e3 , h1+r , 0, Lc2, 5) + factory.addPoint(-e3 , h1+h2, 0, Lc1, 6) + factory.addPoint( e3 , h1+h2, 0, Lc1, 7) + factory.addPoint( e3 , h1+r , 0, Lc2, 8) + factory.addPoint( e3+r , h1+r , 0, Lc2, 9) + factory.addPoint( e3+r , h1 , 0, Lc2, 10) + factory.addPoint( e1+e2, h1 , 0, Lc1, 11) + factory.addPoint( e1+e2, 0 , 0, Lc1, 12) + factory.addPoint( e2 , 0 , 0, Lc1, 13) + + factory.addPoint( R1 / ssin, h5+R1*ccos, 0, Lc2, 14) + factory.addPoint( 0 , h5 , 0, Lc2, 15) + factory.addPoint(-R1 / ssin, h5+R1*ccos, 0, Lc2, 16) + factory.addPoint(-e2 , 0.0 , 0, Lc1, 17) + + factory.addPoint(-R2 , h1+h3 , 0, Lc2, 18) + factory.addPoint(-R2 , h1+h3+h4, 0, Lc2, 19) + factory.addPoint( 0 , h1+h3+h4, 0, Lc2, 20) + factory.addPoint( R2 , h1+h3+h4, 0, Lc2, 21) + factory.addPoint( R2 , h1+h3 , 0, Lc2, 22) + factory.addPoint( 0 , h1+h3 , 0, Lc2, 23) + + factory.addPoint( 0, h1+h3+h4+R2, 0, Lc2, 24) + factory.addPoint( 0, h1+h3-R2, 0, Lc2, 25) + + factory.addLine(1 , 17, 1) + factory.addLine(17, 16, 2) + + factory.addCircleArc(14,15,16, 3) + factory.addLine(14,13, 4) + factory.addLine(13,12, 5) + factory.addLine(12,11, 6) + factory.addLine(11,10, 7) + factory.addCircleArc(8,9,10, 8) + factory.addLine(8,7, 9) + factory.addLine(7,6, 10) + factory.addLine(6,5, 11) + factory.addCircleArc(3,4,5, 12) + factory.addLine(3,2, 13) + factory.addLine(2,1, 14) + factory.addLine(18,19, 15) + factory.addCircleArc(21,20,24, 16) + factory.addCircleArc(24,20,19, 17) + factory.addCircleArc(18,23,25, 18) + factory.addCircleArc(25,23,22, 19) + factory.addLine(21,22, 20) + + factory.addCurveLoop([17,-15,18,19,-20,16], 21) + factory.addPlaneSurface([21], 22) + factory.addCurveLoop([11,-12,13,14,1,2,-3,4,5,6,7,-8,9,10], 23) + + factory.addPlaneSurface([23,21], 24) + + factory.synchronize() + + v = gmsh.view.add("comments") + + gmsh.view.addListDataString(v, [10, -10], ["Created with Gmsh"]) + + gmsh.view.addListDataString(v, [0, 0.11, 0], ["Hole"], + ["Align", "Center", "Font", "Helvetica"]) + + gmsh.view.addListDataString(v, [0, 0.09, 0], ["file://../t4_image.png@0.01x0"], + ["Align", "Center"]) + + gmsh.view.addListDataString(v, [-0.01, 0.09, 0], + ["file://../t4_image.png@0.01x0,0,0,1,0,1,0"]) + + gmsh.view.addListDataString(v, [0, 0.12, 0], + ["file://../t4_image.png@0.01x0#"], + ["Align", "Center"]) + + gmsh.view.addListDataString(v, [150, -7], ["file://../t4_image.png@20x0"]) + + gmsh.view.option.setString(v, "DoubleClickedCommand", + "Printf('View[0] has been double-clicked!');") + gmsh.option.setString( + "Geometry.DoubleClickedLineCommand", + "Printf('Curve %g has been double-clicked!', Geometry.DoubleClickedEntityTag);") + + gmsh.model.setColor([(2, 22)], 127, 127, 127) + gmsh.model.setColor([(2, 24)], 160, 32, 240) + gmsh.model.setColor([(1, i) for i in 1:14], 255, 0, 0) + gmsh.model.setColor([(1, i) for i in 15:20], 255, 255, 0) + + gmsh.model.mesh.generate(2) + grid = ExtendableGrids.simplexgrid_from_gmsh(gmsh.model) + gmsh.finalize() + grid +end + +# ![](gmsh_t4.svg) + +# +# [Example t5](https://gmsh.info/doc/texinfo/gmsh.html#t5) from the GMSH docs +# +function gmsh_t5() + + gmsh.initialize() + + gmsh.model.add("t5") + + lcar1 = .1 + lcar2 = .0005 + lcar3 = .055 + + gmsh.model.geo.addPoint(0.5,0.5,0.5, lcar2, 1) + gmsh.model.geo.addPoint(0.5,0.5,0, lcar1, 2) + gmsh.model.geo.addPoint(0,0.5,0.5, lcar1, 3) + gmsh.model.geo.addPoint(0,0,0.5, lcar1, 4) + gmsh.model.geo.addPoint(0.5,0,0.5, lcar1, 5) + gmsh.model.geo.addPoint(0.5,0,0, lcar1, 6) + gmsh.model.geo.addPoint(0,0.5,0, lcar1, 7) + gmsh.model.geo.addPoint(0,1,0, lcar1, 8) + gmsh.model.geo.addPoint(1,1,0, lcar1, 9) + gmsh.model.geo.addPoint(0,0,1, lcar1, 10) + gmsh.model.geo.addPoint(0,1,1, lcar1, 11) + gmsh.model.geo.addPoint(1,1,1, lcar1, 12) + gmsh.model.geo.addPoint(1,0,1, lcar1, 13) + gmsh.model.geo.addPoint(1,0,0, lcar1, 14) + + gmsh.model.geo.addLine(8,9, 1); gmsh.model.geo.addLine(9,12, 2) + gmsh.model.geo.addLine(12,11, 3); gmsh.model.geo.addLine(11,8, 4) + gmsh.model.geo.addLine(9,14, 5); gmsh.model.geo.addLine(14,13, 6) + gmsh.model.geo.addLine(13,12, 7); gmsh.model.geo.addLine(11,10, 8) + gmsh.model.geo.addLine(10,13, 9); gmsh.model.geo.addLine(10,4, 10) + gmsh.model.geo.addLine(4,5, 11); gmsh.model.geo.addLine(5,6, 12) + gmsh.model.geo.addLine(6,2, 13); gmsh.model.geo.addLine(2,1, 14) + gmsh.model.geo.addLine(1,3, 15); gmsh.model.geo.addLine(3,7, 16) + gmsh.model.geo.addLine(7,2, 17); gmsh.model.geo.addLine(3,4, 18) + gmsh.model.geo.addLine(5,1, 19); gmsh.model.geo.addLine(7,8, 20) + gmsh.model.geo.addLine(6,14, 21); + + gmsh.model.geo.addCurveLoop([-11,-19,-15,-18], 22) + gmsh.model.geo.addPlaneSurface([22], 23) + gmsh.model.geo.addCurveLoop([16,17,14,15], 24) + gmsh.model.geo.addPlaneSurface([24], 25) + gmsh.model.geo.addCurveLoop([-17,20,1,5,-21,13], 26) + gmsh.model.geo.addPlaneSurface([26], 27) + gmsh.model.geo.addCurveLoop([-4,-1,-2,-3], 28) + gmsh.model.geo.addPlaneSurface([28], 29) + gmsh.model.geo.addCurveLoop([-7,2,-5,-6], 30) + gmsh.model.geo.addPlaneSurface([30], 31) + gmsh.model.geo.addCurveLoop([6,-9,10,11,12,21], 32) + gmsh.model.geo.addPlaneSurface([32], 33) + gmsh.model.geo.addCurveLoop([7,3,8,9], 34) + gmsh.model.geo.addPlaneSurface([34], 35) + gmsh.model.geo.addCurveLoop([-10,18,-16,-20,4,-8], 36) + gmsh.model.geo.addPlaneSurface([36], 37) + gmsh.model.geo.addCurveLoop([-14,-13,-12,19], 38) + gmsh.model.geo.addPlaneSurface([38], 39) + + shells = [] + + sl = gmsh.model.geo.addSurfaceLoop([35,31,29,37,33,23,39,25,27]) + push!(shells, sl) + + function cheeseHole(x, y, z, r, lc, shells) + p1 = gmsh.model.geo.addPoint(x, y, z, lc) + p2 = gmsh.model.geo.addPoint(x+r,y, z, lc) + p3 = gmsh.model.geo.addPoint(x, y+r,z, lc) + p4 = gmsh.model.geo.addPoint(x, y, z+r, lc) + p5 = gmsh.model.geo.addPoint(x-r,y, z, lc) + p6 = gmsh.model.geo.addPoint(x, y-r,z, lc) + p7 = gmsh.model.geo.addPoint(x, y, z-r, lc) + + c1 = gmsh.model.geo.addCircleArc(p2,p1,p7) + c2 = gmsh.model.geo.addCircleArc(p7,p1,p5) + c3 = gmsh.model.geo.addCircleArc(p5,p1,p4) + c4 = gmsh.model.geo.addCircleArc(p4,p1,p2) + c5 = gmsh.model.geo.addCircleArc(p2,p1,p3) + c6 = gmsh.model.geo.addCircleArc(p3,p1,p5) + c7 = gmsh.model.geo.addCircleArc(p5,p1,p6) + c8 = gmsh.model.geo.addCircleArc(p6,p1,p2) + c9 = gmsh.model.geo.addCircleArc(p7,p1,p3) + c10 = gmsh.model.geo.addCircleArc(p3,p1,p4) + c11 = gmsh.model.geo.addCircleArc(p4,p1,p6) + c12 = gmsh.model.geo.addCircleArc(p6,p1,p7) + + l1 = gmsh.model.geo.addCurveLoop([c5,c10,c4]) + l2 = gmsh.model.geo.addCurveLoop([c9,-c5,c1]) + l3 = gmsh.model.geo.addCurveLoop([c12,-c8,-c1]) + l4 = gmsh.model.geo.addCurveLoop([c8,-c4,c11]) + l5 = gmsh.model.geo.addCurveLoop([-c10,c6,c3]) + l6 = gmsh.model.geo.addCurveLoop([-c11,-c3,c7]) + l7 = gmsh.model.geo.addCurveLoop([-c2,-c7,-c12]) + l8 = gmsh.model.geo.addCurveLoop([-c6,-c9,c2]) + + s1 = gmsh.model.geo.addSurfaceFilling([l1]) + s2 = gmsh.model.geo.addSurfaceFilling([l2]) + s3 = gmsh.model.geo.addSurfaceFilling([l3]) + s4 = gmsh.model.geo.addSurfaceFilling([l4]) + s5 = gmsh.model.geo.addSurfaceFilling([l5]) + s6 = gmsh.model.geo.addSurfaceFilling([l6]) + s7 = gmsh.model.geo.addSurfaceFilling([l7]) + s8 = gmsh.model.geo.addSurfaceFilling([l8]) + + sl = gmsh.model.geo.addSurfaceLoop([s1, s2, s3, s4, s5, s6, s7, s8]) + v = gmsh.model.geo.addVolume([sl]) + push!(shells, sl) + return v + end + + x = 0 + y = 0.75; z = 0; r = 0.09 + for t in 1:5 + x += 0.166 + z += 0.166 + v = cheeseHole(x, y, z, r, lcar3, shells) + gmsh.model.geo.addPhysicalGroup(3, [v], t) + end + + gmsh.model.geo.addVolume(shells, 186); + + gmsh.model.geo.synchronize() + + gmsh.model.addPhysicalGroup(3, [186], 10); + + gmsh.model.mesh.generate(3) + grid = ExtendableGrids.simplexgrid_from_gmsh(gmsh.model) + gmsh.finalize() + grid +end +# ![](gmsh_t5.svg) + + +# ## CI callbacks for [ExampleJuggler.jl](https://github.com/j-fu/ExampleJuggler.jl) +# Unit tests +using Test +function runtests() + ok(grid)= num_nodes(grid) > 0 && num_cells(grid) > 0 && num_bfaces(grid) > 0 + @test ok(gmsh_t1()) + @test ok(gmsh_t4()) + @test ok(gmsh_t5()) +end + +# Plot generation +using GridVisualize +function generateplots(picdir; Plotter = nothing) + if isdefined(Plotter, :Makie) + size = (500, 500) + Plotter.save(joinpath(picdir, "gmsh_t1.svg"), gridplot(gmsh_t1(); Plotter, size)) + Plotter.save(joinpath(picdir, "gmsh_t4.svg"), gridplot(gmsh_t4(); Plotter, size)) + Plotter.save(joinpath(picdir, "gmsh_t5.svg"), gridplot(gmsh_t5(); Plotter, size)) + end +end diff --git a/v1.2.2/script_examples/gmsh/index.html b/v1.2.2/script_examples/gmsh/index.html new file mode 100644 index 00000000..040bc950 --- /dev/null +++ b/v1.2.2/script_examples/gmsh/index.html @@ -0,0 +1,288 @@ + +gmsh · ExtendableGrids.jl

    Gmsh examples

    using ExtendableGrids
+using Gmsh: gmsh

    Example t1 from the GMSH docs

    function gmsh_t1()
+    gmsh.initialize()
+    gmsh.option.setNumber("General.Terminal", 1)
+    gmsh.model.add("t1")
+
+    lc = 1e-2
+    gmsh.model.geo.addPoint(0, 0, 0, lc, 1)
+    gmsh.model.geo.addPoint(0.1, 0, 0, lc, 2)
+    gmsh.model.geo.addPoint(0.1, 0.3, 0, lc, 3)
+
+    p4 = gmsh.model.geo.addPoint(0, 0.3, 0, lc)
+
+    gmsh.model.geo.addLine(1, 2, 1)
+    gmsh.model.geo.addLine(3, 2, 2)
+    gmsh.model.geo.addLine(3, p4, 3)
+    gmsh.model.geo.addLine(4, 1, p4)
+
+    gmsh.model.geo.addCurveLoop([4, 1, -2, 3], 1)
+    gmsh.model.geo.addPlaneSurface([1], 1)
+
+    gmsh.model.geo.synchronize()
+
+    gmsh.model.addPhysicalGroup(0, [1, 2], 1)
+    gmsh.model.addPhysicalGroup(1, [1, 2], 2)
+    gmsh.model.addPhysicalGroup(2, [1], 6)
+
+    gmsh.model.setPhysicalName(2, 6, "My surface")
+
+    gmsh.model.mesh.generate(2)
+    grid = ExtendableGrids.simplexgrid_from_gmsh(gmsh.model)
+    gmsh.finalize()
+    grid
+end

    Example t4 from the GMSH docs

    function gmsh_t4()
+    gmsh.initialize()
+
+    gmsh.model.add("t4")
+
+    cm = 1e-02
+    e1 = 4.5 * cm; e2 = 6 * cm / 2; e3 =  5 * cm / 2
+    h1 = 5 * cm; h2 = 10 * cm; h3 = 5 * cm; h4 = 2 * cm; h5 = 4.5 * cm
+    R1 = 1 * cm; R2 = 1.5 * cm; r = 1 * cm
+    Lc1 = 0.01
+    Lc2 = 0.003
+
+    function hypot(a, b)
+        return sqrt(a * a + b * b)
+    end
+
+    ccos = (-h5*R1 + e2 * hypot(h5, hypot(e2, R1))) / (h5*h5 + e2*e2)
+    ssin = sqrt(1 - ccos*ccos)
+
+    factory = gmsh.model.geo
+    factory.addPoint(-e1-e2, 0    , 0, Lc1, 1)
+    factory.addPoint(-e1-e2, h1   , 0, Lc1, 2)
+    factory.addPoint(-e3-r , h1   , 0, Lc2, 3)
+    factory.addPoint(-e3-r , h1+r , 0, Lc2, 4)
+    factory.addPoint(-e3   , h1+r , 0, Lc2, 5)
+    factory.addPoint(-e3   , h1+h2, 0, Lc1, 6)
+    factory.addPoint( e3   , h1+h2, 0, Lc1, 7)
+    factory.addPoint( e3   , h1+r , 0, Lc2, 8)
+    factory.addPoint( e3+r , h1+r , 0, Lc2, 9)
+    factory.addPoint( e3+r , h1   , 0, Lc2, 10)
+    factory.addPoint( e1+e2, h1   , 0, Lc1, 11)
+    factory.addPoint( e1+e2, 0    , 0, Lc1, 12)
+    factory.addPoint( e2   , 0    , 0, Lc1, 13)
+
+    factory.addPoint( R1 / ssin, h5+R1*ccos, 0, Lc2, 14)
+    factory.addPoint( 0        , h5        , 0, Lc2, 15)
+    factory.addPoint(-R1 / ssin, h5+R1*ccos, 0, Lc2, 16)
+    factory.addPoint(-e2       , 0.0       , 0, Lc1, 17)
+
+    factory.addPoint(-R2 , h1+h3   , 0, Lc2, 18)
+    factory.addPoint(-R2 , h1+h3+h4, 0, Lc2, 19)
+    factory.addPoint( 0  , h1+h3+h4, 0, Lc2, 20)
+    factory.addPoint( R2 , h1+h3+h4, 0, Lc2, 21)
+    factory.addPoint( R2 , h1+h3   , 0, Lc2, 22)
+    factory.addPoint( 0  , h1+h3   , 0, Lc2, 23)
+
+    factory.addPoint( 0, h1+h3+h4+R2, 0, Lc2, 24)
+    factory.addPoint( 0, h1+h3-R2,    0, Lc2, 25)
+
+    factory.addLine(1 , 17, 1)
+    factory.addLine(17, 16, 2)
+
+    factory.addCircleArc(14,15,16, 3)
+    factory.addLine(14,13, 4)
+    factory.addLine(13,12, 5)
+    factory.addLine(12,11, 6)
+    factory.addLine(11,10, 7)
+    factory.addCircleArc(8,9,10, 8)
+    factory.addLine(8,7, 9)
+    factory.addLine(7,6, 10)
+    factory.addLine(6,5, 11)
+    factory.addCircleArc(3,4,5, 12)
+    factory.addLine(3,2, 13)
+    factory.addLine(2,1, 14)
+    factory.addLine(18,19, 15)
+    factory.addCircleArc(21,20,24, 16)
+    factory.addCircleArc(24,20,19, 17)
+    factory.addCircleArc(18,23,25, 18)
+    factory.addCircleArc(25,23,22, 19)
+    factory.addLine(21,22, 20)
+
+    factory.addCurveLoop([17,-15,18,19,-20,16], 21)
+    factory.addPlaneSurface([21], 22)
+    factory.addCurveLoop([11,-12,13,14,1,2,-3,4,5,6,7,-8,9,10], 23)
+
+    factory.addPlaneSurface([23,21], 24)
+
+    factory.synchronize()
+
+    v = gmsh.view.add("comments")
+
+    gmsh.view.addListDataString(v, [10, -10], ["Created with Gmsh"])
+
+    gmsh.view.addListDataString(v, [0, 0.11, 0], ["Hole"],
+                                ["Align", "Center", "Font", "Helvetica"])
+
+    gmsh.view.addListDataString(v, [0, 0.09, 0], ["file://../t4_image.png@0.01x0"],
+                                ["Align", "Center"])
+
+    gmsh.view.addListDataString(v, [-0.01, 0.09, 0],
+                                ["file://../t4_image.png@0.01x0,0,0,1,0,1,0"])
+
+    gmsh.view.addListDataString(v, [0, 0.12, 0],
+                                ["file://../t4_image.png@0.01x0#"],
+                                ["Align", "Center"])
+
+    gmsh.view.addListDataString(v, [150, -7], ["file://../t4_image.png@20x0"])
+
+    gmsh.view.option.setString(v, "DoubleClickedCommand",
+                               "Printf('View[0] has been double-clicked!');")
+    gmsh.option.setString(
+        "Geometry.DoubleClickedLineCommand",
+        "Printf('Curve %g has been double-clicked!', Geometry.DoubleClickedEntityTag);")
+
+    gmsh.model.setColor([(2, 22)], 127, 127, 127)
+    gmsh.model.setColor([(2, 24)], 160, 32, 240)
+    gmsh.model.setColor([(1, i) for i in 1:14], 255, 0, 0)
+    gmsh.model.setColor([(1, i) for i in 15:20], 255, 255, 0)
+
+    gmsh.model.mesh.generate(2)
+    grid = ExtendableGrids.simplexgrid_from_gmsh(gmsh.model)
+    gmsh.finalize()
+    grid
+end

    Example t5 from the GMSH docs

    function gmsh_t5()
+
+    gmsh.initialize()
+
+    gmsh.model.add("t5")
+
+    lcar1 = .1
+    lcar2 = .0005
+    lcar3 = .055
+
+    gmsh.model.geo.addPoint(0.5,0.5,0.5, lcar2, 1)
+    gmsh.model.geo.addPoint(0.5,0.5,0, lcar1, 2)
+    gmsh.model.geo.addPoint(0,0.5,0.5, lcar1, 3)
+    gmsh.model.geo.addPoint(0,0,0.5, lcar1, 4)
+    gmsh.model.geo.addPoint(0.5,0,0.5, lcar1, 5)
+    gmsh.model.geo.addPoint(0.5,0,0, lcar1, 6)
+    gmsh.model.geo.addPoint(0,0.5,0, lcar1, 7)
+    gmsh.model.geo.addPoint(0,1,0, lcar1, 8)
+    gmsh.model.geo.addPoint(1,1,0, lcar1, 9)
+    gmsh.model.geo.addPoint(0,0,1, lcar1, 10)
+    gmsh.model.geo.addPoint(0,1,1, lcar1, 11)
+    gmsh.model.geo.addPoint(1,1,1, lcar1, 12)
+    gmsh.model.geo.addPoint(1,0,1, lcar1, 13)
+    gmsh.model.geo.addPoint(1,0,0, lcar1, 14)
+
+    gmsh.model.geo.addLine(8,9, 1);   gmsh.model.geo.addLine(9,12, 2)
+    gmsh.model.geo.addLine(12,11, 3); gmsh.model.geo.addLine(11,8, 4)
+    gmsh.model.geo.addLine(9,14, 5);  gmsh.model.geo.addLine(14,13, 6)
+    gmsh.model.geo.addLine(13,12, 7); gmsh.model.geo.addLine(11,10, 8)
+    gmsh.model.geo.addLine(10,13, 9); gmsh.model.geo.addLine(10,4, 10)
+    gmsh.model.geo.addLine(4,5, 11);  gmsh.model.geo.addLine(5,6, 12)
+    gmsh.model.geo.addLine(6,2, 13);  gmsh.model.geo.addLine(2,1, 14)
+    gmsh.model.geo.addLine(1,3, 15);  gmsh.model.geo.addLine(3,7, 16)
+    gmsh.model.geo.addLine(7,2, 17);  gmsh.model.geo.addLine(3,4, 18)
+    gmsh.model.geo.addLine(5,1, 19);  gmsh.model.geo.addLine(7,8, 20)
+    gmsh.model.geo.addLine(6,14, 21);
+
+    gmsh.model.geo.addCurveLoop([-11,-19,-15,-18], 22)
+    gmsh.model.geo.addPlaneSurface([22], 23)
+    gmsh.model.geo.addCurveLoop([16,17,14,15], 24)
+    gmsh.model.geo.addPlaneSurface([24], 25)
+    gmsh.model.geo.addCurveLoop([-17,20,1,5,-21,13], 26)
+    gmsh.model.geo.addPlaneSurface([26], 27)
+    gmsh.model.geo.addCurveLoop([-4,-1,-2,-3], 28)
+    gmsh.model.geo.addPlaneSurface([28], 29)
+    gmsh.model.geo.addCurveLoop([-7,2,-5,-6], 30)
+    gmsh.model.geo.addPlaneSurface([30], 31)
+    gmsh.model.geo.addCurveLoop([6,-9,10,11,12,21], 32)
+    gmsh.model.geo.addPlaneSurface([32], 33)
+    gmsh.model.geo.addCurveLoop([7,3,8,9], 34)
+    gmsh.model.geo.addPlaneSurface([34], 35)
+    gmsh.model.geo.addCurveLoop([-10,18,-16,-20,4,-8], 36)
+    gmsh.model.geo.addPlaneSurface([36], 37)
+    gmsh.model.geo.addCurveLoop([-14,-13,-12,19], 38)
+    gmsh.model.geo.addPlaneSurface([38], 39)
+
+    shells = []
+
+    sl = gmsh.model.geo.addSurfaceLoop([35,31,29,37,33,23,39,25,27])
+    push!(shells, sl)
+
+    function cheeseHole(x, y, z, r, lc, shells)
+        p1 = gmsh.model.geo.addPoint(x,  y,  z,   lc)
+        p2 = gmsh.model.geo.addPoint(x+r,y,  z,   lc)
+        p3 = gmsh.model.geo.addPoint(x,  y+r,z,   lc)
+        p4 = gmsh.model.geo.addPoint(x,  y,  z+r, lc)
+        p5 = gmsh.model.geo.addPoint(x-r,y,  z,   lc)
+        p6 = gmsh.model.geo.addPoint(x,  y-r,z,   lc)
+        p7 = gmsh.model.geo.addPoint(x,  y,  z-r, lc)
+
+        c1 = gmsh.model.geo.addCircleArc(p2,p1,p7)
+        c2 = gmsh.model.geo.addCircleArc(p7,p1,p5)
+        c3 = gmsh.model.geo.addCircleArc(p5,p1,p4)
+        c4 = gmsh.model.geo.addCircleArc(p4,p1,p2)
+        c5 = gmsh.model.geo.addCircleArc(p2,p1,p3)
+        c6 = gmsh.model.geo.addCircleArc(p3,p1,p5)
+        c7 = gmsh.model.geo.addCircleArc(p5,p1,p6)
+        c8 = gmsh.model.geo.addCircleArc(p6,p1,p2)
+        c9 = gmsh.model.geo.addCircleArc(p7,p1,p3)
+        c10 = gmsh.model.geo.addCircleArc(p3,p1,p4)
+        c11 = gmsh.model.geo.addCircleArc(p4,p1,p6)
+        c12 = gmsh.model.geo.addCircleArc(p6,p1,p7)
+
+        l1 = gmsh.model.geo.addCurveLoop([c5,c10,c4])
+        l2 = gmsh.model.geo.addCurveLoop([c9,-c5,c1])
+        l3 = gmsh.model.geo.addCurveLoop([c12,-c8,-c1])
+        l4 = gmsh.model.geo.addCurveLoop([c8,-c4,c11])
+        l5 = gmsh.model.geo.addCurveLoop([-c10,c6,c3])
+        l6 = gmsh.model.geo.addCurveLoop([-c11,-c3,c7])
+        l7 = gmsh.model.geo.addCurveLoop([-c2,-c7,-c12])
+        l8 = gmsh.model.geo.addCurveLoop([-c6,-c9,c2])
+
+        s1 = gmsh.model.geo.addSurfaceFilling([l1])
+        s2 = gmsh.model.geo.addSurfaceFilling([l2])
+        s3 = gmsh.model.geo.addSurfaceFilling([l3])
+        s4 = gmsh.model.geo.addSurfaceFilling([l4])
+        s5 = gmsh.model.geo.addSurfaceFilling([l5])
+        s6 = gmsh.model.geo.addSurfaceFilling([l6])
+        s7 = gmsh.model.geo.addSurfaceFilling([l7])
+        s8 = gmsh.model.geo.addSurfaceFilling([l8])
+
+        sl = gmsh.model.geo.addSurfaceLoop([s1, s2, s3, s4, s5, s6, s7, s8])
+        v = gmsh.model.geo.addVolume([sl])
+        push!(shells, sl)
+        return v
+    end
+
+    x = 0
+    y = 0.75; z = 0; r = 0.09
+    for t in 1:5
+        x += 0.166
+        z += 0.166
+        v = cheeseHole(x, y, z, r, lcar3, shells)
+        gmsh.model.geo.addPhysicalGroup(3, [v], t)
+    end
+
+    gmsh.model.geo.addVolume(shells, 186);
+
+    gmsh.model.geo.synchronize()
+
+    gmsh.model.addPhysicalGroup(3, [186], 10);
+
+    gmsh.model.mesh.generate(3)
+    grid = ExtendableGrids.simplexgrid_from_gmsh(gmsh.model)
+    gmsh.finalize()
+    grid
+end

    CI callbacks for ExampleJuggler.jl

    Unit tests

    using Test
+function runtests()
+    ok(grid)= num_nodes(grid) > 0 && num_cells(grid) > 0 && num_bfaces(grid) > 0
+    @test ok(gmsh_t1())
+    @test ok(gmsh_t4())
+    @test ok(gmsh_t5())
+end

    Plot generation

    using GridVisualize
+function generateplots(picdir; Plotter = nothing)
+    if isdefined(Plotter, :Makie)
+        size = (500, 500)
+        Plotter.save(joinpath(picdir, "gmsh_t1.svg"), gridplot(gmsh_t1(); Plotter, size))
+        Plotter.save(joinpath(picdir, "gmsh_t4.svg"), gridplot(gmsh_t4(); Plotter, size))
+        Plotter.save(joinpath(picdir, "gmsh_t5.svg"), gridplot(gmsh_t5(); Plotter, size))
+    end
+end

    This page was generated using Literate.jl.

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geometries are in the mesh uniform refinement will only work if all refinement rules refine faces and edges (in 3D) equally (so no hanging nodes are created)\n\n\n\n\n\n","category":"method"},{"location":"script_examples/examples3d/#3D-Grid-examples","page":"examples3d","title":"3D Grid examples","text":"","category":"section"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"using ExtendableGrids","category":"page"},{"location":"script_examples/examples3d/#Quadrilateral","page":"examples3d","title":"Quadrilateral","text":"","category":"section"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"function quadrilateral(; hx = 0.25, hy = 0.2, hz = 0.1)\n X = collect(0:hx:1)\n Y = collect(0:hy:1)\n Z = collect(0:hz:1)\n simplexgrid(X, Y, Z)\nend","category":"page"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"(Image: )","category":"page"},{"location":"script_examples/examples3d/#Cross3d","page":"examples3d","title":"Cross3d","text":"","category":"section"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"function cross3d()\n X = collect(0:0.1:1)\n Y = collect(0:0.1:1)\n Z = collect(0:0.1:1)\n grid = simplexgrid(X, Y, Z)\n\n rect!(grid, (0, 0.4, 0), (1, 0.6, 0.2); region = 2, bregions = [1, 1, 1, 1, 2, 3])\n\n rect!(grid, (0.4, 0, 0.2), (0.6, 1, 0.4); region = 2, bregions = [4, 4, 4, 4, (cur) -> cur == 3 ? 0 : 5, 6])\n\n subgrid(grid, [2])\nend","category":"page"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"(Image: )","category":"page"},{"location":"script_examples/examples3d/#CI-callbacks-for-[ExampleJuggler.jl](https://github.com/j-fu/ExampleJuggler.jl)","page":"examples3d","title":"CI callbacks for ExampleJuggler.jl","text":"","category":"section"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"Unit tests","category":"page"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"function mask_bedges()\n grid = quadrilateral(; hx = 0.25, hy = 0.25, hz = 0.25)\n\n bedgemask!(grid, [0.0, 0.0, 0.0], [0.0, 0.0, 1.0], 1)\n bedgemask!(grid, [0.0, 0.0, 0.0], [0.0, 1.0, 0.0], 2)\n bedgemask!(grid, [0.0, 1.0, 0.0], [0.0, 1.0, 1.0], 3)\n bedgemask!(grid, [0.0, 0.0, 1.0], [0.0, 1.0, 1.0], 4)\n bedgemask!(grid, [0.0, 1.0, 0.0], [0.0, 0.0, 1.0], 5)\n\n true\nend\n\nusing Test\n\nfunction runtests()\n @test numbers_match(quadrilateral(), 330, 1200, 440)\n @test mask_bedges()\n @test numbers_match(cross3d(), 189, 480, 344)\nend","category":"page"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"Plot generation","category":"page"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"using GridVisualize\nfunction generateplots(picdir; Plotter = nothing)\n if isdefined(Plotter, :Makie)\n size = (400, 400)\n Plotter.save(joinpath(picdir, \"quadrilateral.svg\"), gridplot(quadrilateral(); Plotter, size))\n Plotter.save(joinpath(picdir, \"cross3d.svg\"), gridplot(cross3d(); Plotter, size))\n end\nend","category":"page"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"","category":"page"},{"location":"script_examples/examples3d/","page":"examples3d","title":"examples3d","text":"This page was generated using Literate.jl.","category":"page"},{"location":"assembly/#Assembly-support","page":"Assembly support","title":"Assembly support","text":"","category":"section"},{"location":"assembly/#API","page":"Assembly support","title":"API","text":"","category":"section"},{"location":"assembly/","page":"Assembly support","title":"Assembly support","text":"Modules = [ExtendableGrids]\nPages = [\"assemblytypes.jl\",\"l2gtransformations.jl\"]","category":"page"},{"location":"assembly/#ExtendableGrids.AT_NODES","page":"Assembly support","title":"ExtendableGrids.AT_NODES","text":"abstract type AT_NODES <: AssemblyType\n\ncauses interpolation at vertices of the grid (only for H1-conforming interpolations)\n\n\n\n\n\n","category":"type"},{"location":"assembly/#ExtendableGrids.ON_BEDGES","page":"Assembly support","title":"ExtendableGrids.ON_BEDGES","text":"abstract type ON_BEDGES <: AssemblyType\n\ncauses assembly/interpolation on boundary edges of the grid (only in 3D)\n\n\n\n\n\n","category":"type"},{"location":"assembly/#ExtendableGrids.ON_BFACES","page":"Assembly support","title":"ExtendableGrids.ON_BFACES","text":"abstract type ON_BFACES <: AssemblyType\n\ncauses assembly/interpolation on boundary faces of the grid\n\n\n\n\n\n","category":"type"},{"location":"assembly/#ExtendableGrids.ON_CELLS","page":"Assembly support","title":"ExtendableGrids.ON_CELLS","text":"abstract type ON_CELLS <: AssemblyType\n\ncauses assembly/interpolation on cells of the grid\n\n\n\n\n\n","category":"type"},{"location":"assembly/#ExtendableGrids.ON_EDGES","page":"Assembly support","title":"ExtendableGrids.ON_EDGES","text":"abstract type ON_EDGES <: AssemblyType\n\ncauses assembly/interpolation on edges of the grid (only in 3D)\n\n\n\n\n\n","category":"type"},{"location":"assembly/#ExtendableGrids.ON_FACES","page":"Assembly support","title":"ExtendableGrids.ON_FACES","text":"abstract type ON_FACES <: AssemblyType\n\ncauses assembly/interpolation on faces of the grid\n\n\n\n\n\n","category":"type"},{"location":"assembly/#ExtendableGrids.ON_IFACES","page":"Assembly support","title":"ExtendableGrids.ON_IFACES","text":"abstract type ON_IFACES <: ON_FACES\n\ncauses assembly/interpolation on interior faces of the grid\n\n\n\n\n\n","category":"type"},{"location":"assembly/#ExtendableGrids.L2GTransformer","page":"Assembly support","title":"ExtendableGrids.L2GTransformer","text":"L2GTransformer\n\nTransforms reference coordinates to global coordinates\n\n\n\n\n\n","category":"type"},{"location":"voronoi/#Voronoi-tools","page":"Voronoi tools","title":"Voronoi tools","text":"","category":"section"},{"location":"voronoi/#API","page":"Voronoi tools","title":"API","text":"","category":"section"},{"location":"voronoi/","page":"Voronoi tools","title":"Voronoi tools","text":"Modules = [ExtendableGrids]\nPages = [\"voronoi.jl\"]","category":"page"},{"location":"voronoi/#ExtendableGrids.VoronoiFaceCenters","page":"Voronoi tools","title":"ExtendableGrids.VoronoiFaceCenters","text":"abstract type VoronoiFaceCenters <: AbstractGridFloatArray2D\n\nCenters of voronoi cell facets (currently 1D, 2D).\n\n\n\n\n\n","category":"type"},{"location":"voronoi/#ExtendableGrids.tricircumcenter!-NTuple{4, Any}","page":"Voronoi tools","title":"ExtendableGrids.tricircumcenter!","text":"tricircumcenter!(circumcenter, a, b, c)\n\n\nFind the circumcenter of a triangle. \n\nDerived from C source of Jonathan R Shewchuk \n\nModified to return absolute coordinates.\n\n\n\n\n\n","category":"method"},{"location":"allindex/#Index","page":"Index","title":"Index","text":"","category":"section"},{"location":"allindex/#Types-and-Constructors","page":"Index","title":"Types and Constructors","text":"","category":"section"},{"location":"allindex/","page":"Index","title":"Index","text":"Modules = [ExtendableGrids]\nOrder=[:type]","category":"page"},{"location":"allindex/#Constants","page":"Index","title":"Constants","text":"","category":"section"},{"location":"allindex/","page":"Index","title":"Index","text":"Modules = [ExtendableGrids]\nOrder=[:constant]","category":"page"},{"location":"allindex/#Methods","page":"Index","title":"Methods","text":"","category":"section"},{"location":"allindex/","page":"Index","title":"Index","text":"Modules = [ExtendableGrids]\nOrder=[:function]","category":"page"},{"location":"gridconstructors/#Grid-constructors","page":"Grid constructors","title":"Grid constructors","text":"","category":"section"},{"location":"gridconstructors/#API","page":"Grid constructors","title":"API","text":"","category":"section"},{"location":"gridconstructors/","page":"Grid constructors","title":"Grid constructors","text":"Modules = [ExtendableGrids]\nPages = [\"simplexgrid.jl\",\"commongrids.jl\"]","category":"page"},{"location":"gridconstructors/#ExtendableGrids.glue-Tuple{Any, Any}","page":"Grid constructors","title":"ExtendableGrids.glue","text":"function glue(g1,g2; g1regions=1:numbfaceregions(g1), g2regions=1:numbfaceregions(g2), interface=0, tol=1.0e-10)\n\nMerge two grids along their common boundary facets. \n\ng1: First grid to be merged\ng2: Second grid to be merged\ng1regions: boundary regions to be used from grid1. Default: all.\ng2regions: boundary regions to be used from grid2. Default: all.\ninterface: if nonzero, create interface region in new grid, otherwise, ignore\ntol: Distance below which two points are seen as identical. Default: 1.0e-10\n\nDeprecated:\n\nbreg: old notation for interface\n\n\n\n\n\n","category":"method"},{"location":"gridconstructors/#ExtendableGrids.simplexgrid-Tuple{AbstractVector, AbstractVector, AbstractVector}","page":"Grid constructors","title":"ExtendableGrids.simplexgrid","text":"simplexgrid(X,Y,Z; bregions=[1,2,3,4,5,6],cellregion=1)\n\nConstructor for 3D grid from coordinate arrays. Boundary region numbers:\n\nlocation number\nsouth 1\neast 2\nnorth 3\nwest 4\nbottom 5\ntop 6\n\nThe keyword arguments allow to overwrite the default region numbers.\n\n\n\n\n\n","category":"method"},{"location":"gridconstructors/#ExtendableGrids.simplexgrid-Tuple{AbstractVector, AbstractVector}","page":"Grid constructors","title":"ExtendableGrids.simplexgrid","text":"simplexgrid(X,Y; bregions=[1,2,3,4],cellregion=1)\n\nConstructor for 2D grid from coordinate arrays. \n\nBoundary region numbers count counterclockwise:\n\nlocation number\nsouth 1\neast 2\nnorth 3\nwest 4\n\nThe keyword arguments allow to overwrite the default region numbers.\n\n\n\n\n\n","category":"method"},{"location":"gridconstructors/#ExtendableGrids.simplexgrid-Tuple{AbstractVector}","page":"Grid constructors","title":"ExtendableGrids.simplexgrid","text":"simplexgrid(X; bregions=[1,2],cellregion=1)\n\nConstructor for 1D grid.\n\nConstruct 1D grid from an array of node cordinates. It creates two boundary regions with index 1 at the left end and index 2 at the right end by default.\n\nThe keyword arguments allow to overwrite the default region numbers.\n\nPrimal grid holding unknowns: marked by o, dual grid marking control volumes: marked by |.\n\n o-----o-----o-----o-----o-----o-----o-----o-----o\n |--|-----|-----|-----|-----|-----|-----|-----|--|\n\n\n\n\n\n","category":"method"},{"location":"gridconstructors/#ExtendableGrids.simplexgrid-Tuple{ExtendableGrid, Any}","page":"Grid constructors","title":"ExtendableGrids.simplexgrid","text":"simplexgrid(grid2d::ExtendableGrid, coordZ; bot_offset=0,cell_offset=0,top_offset=0, bface_offset=0)\n\nCreate tensor product of 2D grid and 1D coordinate array.\n\nCellregions and outer facet regions are taken over from 2D grid and added to cell_offset and bface_offset, respectively. Top an bottom facet regions are detected from the cell regions and added to bot_offset resp. top_offset.\n\n\n\n\n\n","category":"method"},{"location":"gridconstructors/#ExtendableGrids.simplexgrid-Union{Tuple{Ti}, Tuple{Tc}, Tuple{AbstractMatrix{Tc}, AbstractMatrix{Ti}, Any, Any, Any}} where {Tc, Ti}","page":"Grid constructors","title":"ExtendableGrids.simplexgrid","text":"function simplexgrid(coord::Array{Tc,2},\n cellnodes::Array{Ti,2},\n cellregions,\n bfacenodes,\n bfaceregions\n ) where {Tc,Ti}\n\nCreate d-dimensional simplex grid from five arrays.\n\ncoord: d times n_points matrix of coordinates\ncellnodes: d+1 times n_tri matrix of triangle - point incidence\ncellregions: n_tri vector of cell region markers\nbfacenodes: d times n_bf matrix of boundary facet - point incidences\nbfaceregions: n_bf vector of boundary facet region markers\n\nCoordinate type Tc index type Ti are detected from the first two parameters. cellregions, bfaceregions, bfacenodes are converted to have the same element type as cellnodes.\n\n\n\n\n\n","category":"method"},{"location":"gridconstructors/#ExtendableGrids.simplexgrid-Union{Tuple{Ti}, Tuple{Tc}, Tuple{Matrix{Tc}, Matrix{Ti}, Vararg{Any, 5}}} where {Tc, Ti}","page":"Grid constructors","title":"ExtendableGrids.simplexgrid","text":"function simplexgrid(coord::Array{Tc,2},\n cellnodes::Array{Ti,2},\n cellregions,\n bfacenodes,\n bfaceregions,\n bedgenodes,\n bedgeregions\n ) where {Tc,Ti}\n\nCreate simplex grid from coordinates, cell-nodes-adjancency, cell-region-numbers, boundary-face-nodes adjacency, boundary-face-region-numbers, boundary-edge-nodes, and boundary-edge-region-numbers arrays.\n\nThe index type Ti is detected from cellnodes, all other arrays besides coord are converted to this index type.\n\n\n\n\n\n","category":"method"},{"location":"gridconstructors/#ExtendableGrids.grid_triangle-Union{Tuple{AbstractMatrix{T}}, Tuple{T}} where T","page":"Grid constructors","title":"ExtendableGrids.grid_triangle","text":" Triangle(coords) -> ExtendableGrid{T,Int32}\n\nGenerates a single triangle with the given coordinates, that should be a 2 x 3 array with the coordinates of the three vertices, e.g. coords = [0.0 0.0; 1.0 0.0; 0.0 1.0]'.\n\n\n\n\n\n","category":"method"},{"location":"gridconstructors/#ExtendableGrids.reference_domain","page":"Grid constructors","title":"ExtendableGrids.reference_domain","text":" reference_domain(EG::Type{<:AbstractElementGeometry}, T::Type{<:Real} = Float64; scale = [1,1,1], shift = [0,0,0]) -> ExtendableGrid{T,Int32}\n\nGenerates an ExtendableGrid{T,Int32} for the reference domain of the specified Element Geometry. With scale and shift the coordinates can be manipulated.\n\n\n\n\n\n","category":"function"},{"location":"adjacency/#Adjacency","page":"Adjacency","title":"Adjacency","text":"","category":"section"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"This handles adjacency matrices between entities of polyhedral complexes, e.g. nodes, cells, edges etc.","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"An adjacency is described by an Adjacency matrix, which is a sparse matrix whose entries a 0 or 1. While such a matrix always can be stored as a SparseMatrixCSC, in general this would be a waste of storage.","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"For the general case, it is sufficient to only store the column start indieces and the column entries (row numbers), and to implicitely assume that nonzero entries are 1. This kind of storage is realised in a VariableTargetAdjacency.","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"In many cases, this can be compressed even more, if each column has the same length. In that case, a Matrix is sufficient to store the data. This is the usual base for implementing FEM/FVM assembly, and the interface for the general case should be similar.","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"From these ideas we develop the following interface for an adjacency a.","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"In order to avoid name confusion, we introduce the following notation which should be consistent with the use in assembly loops.","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"source: source of adjacency link target: target of adjacency link","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"E.g. the cell-node adjacency for FEM assembly links a number of cells with a collection of nodes. The cells are the sources, and the targets are the nodes. ","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"getindex(a,i,isource) aka a[i,isource]: return i-th target of source j numsources(a): overall number of sources, e.g. number of cells numtargets(a): overall number of targets numtargets(a,isource): number of targets for source given by isource numlinks(a): number of links aka nonzero entries of adjacency matrix show(a): print stuff","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"Further API ideas:","category":"page"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"Convert between Matrix and Variable target stuff using 0 entries as \"padding\"","category":"page"},{"location":"adjacency/#API","page":"Adjacency","title":"API","text":"","category":"section"},{"location":"adjacency/","page":"Adjacency","title":"Adjacency","text":"Modules = [ExtendableGrids]\nPages = [\"adjacency.jl\",\"serialadjacency.jl\"]","category":"page"},{"location":"adjacency/#ExtendableGrids.Adjacency","page":"Adjacency","title":"ExtendableGrids.Adjacency","text":"Adjacency type as union of FixedTargetAdjacency and VariableTargetAdjacency\n\n\n\n\n\n","category":"type"},{"location":"adjacency/#ExtendableGrids.Adjacency-Union{Tuple{Matrix{T}}, Tuple{T}} where T","page":"Adjacency","title":"ExtendableGrids.Adjacency","text":"Constructors for Adjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.FixedTargetAdjacency","page":"Adjacency","title":"ExtendableGrids.FixedTargetAdjacency","text":"mutable struct Array{T, 2} <: DenseArray{T, 2}\n\nUse Matrix to store fixed target adjacency\n\n\n\n\n\n","category":"type"},{"location":"adjacency/#ExtendableGrids.SerialVariableTargetAdjacency-Tuple{}","page":"Adjacency","title":"ExtendableGrids.SerialVariableTargetAdjacency","text":"SerialVariableTargetAdjacency(\n\n) -> SerialVariableTargetAdjacency{Int64}\n\n\nCreate an empty SerialVariableTargetAdjacency with default type\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.SerialVariableTargetAdjacency-Union{Tuple{Type{T}}, Tuple{T}} where T","page":"Adjacency","title":"ExtendableGrids.SerialVariableTargetAdjacency","text":"SerialVariableTargetAdjacency(\n t::Type{T}\n) -> SerialVariableTargetAdjacency\n\n\nCreate an empty SerialVariableTargetAdjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.VariableTargetAdjacency","page":"Adjacency","title":"ExtendableGrids.VariableTargetAdjacency","text":"struct VariableTargetAdjacency{T}\n\nAdjacency struct. Essentially, this is the sparsity pattern of a matrix whose nonzero elements all have the same value in the CSC format.\n\n\n\n\n\n","category":"type"},{"location":"adjacency/#ExtendableGrids.VariableTargetAdjacency-Tuple{}","page":"Adjacency","title":"ExtendableGrids.VariableTargetAdjacency","text":"VariableTargetAdjacency() -> VariableTargetAdjacency{Int64}\n\n\nCreate an empty VariableTargetAdjacency with default type\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.VariableTargetAdjacency-Union{Tuple{Matrix{T}}, Tuple{T}} where T","page":"Adjacency","title":"ExtendableGrids.VariableTargetAdjacency","text":"VariableTargetAdjacency(\n m::Array{T, 2}\n) -> VariableTargetAdjacency\n\n\nCreate a VariableTargetAdjacency from Matrix\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.VariableTargetAdjacency-Union{Tuple{SparseArrays.SparseMatrixCSC{Tv, Ti}}, Tuple{Ti}, Tuple{Tv}} where {Tv<:Integer, Ti<:Integer}","page":"Adjacency","title":"ExtendableGrids.VariableTargetAdjacency","text":"VariableTargetAdjacency(\n m::SparseArrays.SparseMatrixCSC{Tv<:Integer, Ti<:Integer}\n) -> VariableTargetAdjacency\n\n\nCreate variable target adjacency from adjacency matrix\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.VariableTargetAdjacency-Union{Tuple{Type{T}}, Tuple{T}} where T","page":"Adjacency","title":"ExtendableGrids.VariableTargetAdjacency","text":"VariableTargetAdjacency(\n t::Type{T}\n) -> VariableTargetAdjacency\n\n\nCreate an empty VariableTargetAdjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#Base.:==-Union{Tuple{Tb}, Tuple{Ta}, Tuple{SerialVariableTargetAdjacency{Ta}, SerialVariableTargetAdjacency{Tb}}} where {Ta, Tb}","page":"Adjacency","title":"Base.:==","text":"==(a, b)\n\n\nComparison of two adjacencies\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#Base.:==-Union{Tuple{Tb}, Tuple{Ta}, Tuple{VariableTargetAdjacency{Ta}, VariableTargetAdjacency{Tb}}} where {Ta, Tb}","page":"Adjacency","title":"Base.:==","text":"==(a, b)\n\n\nComparison of two adjacencies\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#Base.append!-Tuple{SerialVariableTargetAdjacency, Any}","page":"Adjacency","title":"Base.append!","text":"append!(adj::SerialVariableTargetAdjacency, len) -> Vector\n\n\nAppend a column to adjacency.\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#Base.append!-Tuple{VariableTargetAdjacency, Any}","page":"Adjacency","title":"Base.append!","text":"append!(adj::VariableTargetAdjacency, column) -> Vector\n\n\nAppend a column to adjacency.\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#Base.getindex-Tuple{SerialVariableTargetAdjacency, Any, Any}","page":"Adjacency","title":"Base.getindex","text":"getindex(\n adj::SerialVariableTargetAdjacency,\n i,\n isource\n) -> Any\n\n\nAccess adjacency as if it is a 2D Array\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#Base.getindex-Tuple{VariableTargetAdjacency, Any, Any}","page":"Adjacency","title":"Base.getindex","text":"getindex(adj::VariableTargetAdjacency, i, isource) -> Any\n\n\nAccess adjacency as if it is a 2D Array\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#Base.show-Tuple{IO, SerialVariableTargetAdjacency}","page":"Adjacency","title":"Base.show","text":"show(io::IO, adj::SerialVariableTargetAdjacency)\n\n\nShow adjacency (in trasposed form; preliminary)\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#Base.show-Tuple{IO, VariableTargetAdjacency}","page":"Adjacency","title":"Base.show","text":"show(io::IO, adj::VariableTargetAdjacency)\n\n\nShow adjacency (in trasposed form; preliminary)\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.asparse-Tuple{Matrix}","page":"Adjacency","title":"ExtendableGrids.asparse","text":"asparse(a::Matrix) -> SparseArrays.SparseMatrixCSC{Int64}\n\n\nCreate sparse incidence matrix from adjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.asparse-Tuple{VariableTargetAdjacency}","page":"Adjacency","title":"ExtendableGrids.asparse","text":"asparse(\n a::VariableTargetAdjacency\n) -> SparseArrays.SparseMatrixCSC{Int64}\n\n\nCreate sparse incidence matrix from adjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.atranspose-Union{Tuple{Adjacency{T}}, Tuple{T}} where T","page":"Adjacency","title":"ExtendableGrids.atranspose","text":"Transpose adjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.makevar-Union{Tuple{Matrix{T}}, Tuple{T}} where T","page":"Adjacency","title":"ExtendableGrids.makevar","text":"makevar(a::Array{T, 2}) -> VariableTargetAdjacency\n\n\nTurn fixed target adjacency into variable target adjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.max_num_targets_per_source-Tuple{Matrix}","page":"Adjacency","title":"ExtendableGrids.max_num_targets_per_source","text":"max_num_targets_per_source(adj::Matrix) -> Int64\n\n\nMaximum number of targets per source\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.max_num_targets_per_source-Tuple{SerialVariableTargetAdjacency}","page":"Adjacency","title":"ExtendableGrids.max_num_targets_per_source","text":"max_num_targets_per_source(\n adj::SerialVariableTargetAdjacency\n) -> Any\n\n\nMaximum number of targets per source\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.max_num_targets_per_source-Tuple{VariableTargetAdjacency}","page":"Adjacency","title":"ExtendableGrids.max_num_targets_per_source","text":"max_num_targets_per_source(\n adj::VariableTargetAdjacency\n) -> Any\n\n\nMaximum number of targets per source\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_links-Tuple{Matrix}","page":"Adjacency","title":"ExtendableGrids.num_links","text":"num_links(adj::Matrix) -> Int64\n\n\nNumber of entries\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_links-Tuple{VariableTargetAdjacency}","page":"Adjacency","title":"ExtendableGrids.num_links","text":"num_links(adj::VariableTargetAdjacency) -> Int64\n\n\nNumber of links\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_sources-Tuple{Matrix}","page":"Adjacency","title":"ExtendableGrids.num_sources","text":"num_sources(adj::Matrix) -> Int64\n\n\nNumber of sources in adjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_sources-Tuple{SerialVariableTargetAdjacency}","page":"Adjacency","title":"ExtendableGrids.num_sources","text":"num_sources(adj::SerialVariableTargetAdjacency) -> Int64\n\n\nNumber of sources in adjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_sources-Tuple{VariableTargetAdjacency}","page":"Adjacency","title":"ExtendableGrids.num_sources","text":"num_sources(adj::VariableTargetAdjacency) -> Int64\n\n\nNumber of sources in adjacency\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_targets-Tuple{Matrix, Any}","page":"Adjacency","title":"ExtendableGrids.num_targets","text":"num_targets(adj::Matrix, isource) -> Int64\n\n\nNumber of targets per source if adjacency is a matrix\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_targets-Tuple{Matrix}","page":"Adjacency","title":"ExtendableGrids.num_targets","text":"num_targets(adj::Matrix) -> Any\n\n\nOverall number of targets \n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_targets-Tuple{SerialVariableTargetAdjacency, Any}","page":"Adjacency","title":"ExtendableGrids.num_targets","text":"num_targets(\n adj::SerialVariableTargetAdjacency,\n isource\n) -> Any\n\n\nNumber of targets for given source\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_targets-Tuple{VariableTargetAdjacency, Any}","page":"Adjacency","title":"ExtendableGrids.num_targets","text":"num_targets(adj::VariableTargetAdjacency, isource) -> Any\n\n\nNumber of targets for given source\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.num_targets-Tuple{VariableTargetAdjacency}","page":"Adjacency","title":"ExtendableGrids.num_targets","text":"num_targets(adj::VariableTargetAdjacency) -> Any\n\n\nNumber of targeta\n\n\n\n\n\n","category":"method"},{"location":"adjacency/#ExtendableGrids.tryfix-Union{Tuple{Adjacency{T}}, Tuple{T}} where T","page":"Adjacency","title":"ExtendableGrids.tryfix","text":"tryfix(\n a::Union{Array{T, 2}, VariableTargetAdjacency{T}}\n) -> Any\n\n\nTry to turn variable target adjacency into fixed target adjacency\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#Shape-specifications","page":"Shape specifications","title":"Shape specifications","text":"","category":"section"},{"location":"shape_specs/#API","page":"Shape specifications","title":"API","text":"","category":"section"},{"location":"shape_specs/","page":"Shape specifications","title":"Shape specifications","text":"Modules = [ExtendableGrids]\nPages = [\"shape_specs.jl\"]","category":"page"},{"location":"shape_specs/#ExtendableGrids.facetype_of_cellface-Tuple{Type{<:AbstractElementGeometry1D}, Any}","page":"Shape specifications","title":"ExtendableGrids.facetype_of_cellface","text":"facetype_of_cellface(_, k)\n\n\nGeometries of faces of 1D edge\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.facetype_of_cellface-Tuple{Type{<:Hexahedron3D}, Any}","page":"Shape specifications","title":"ExtendableGrids.facetype_of_cellface","text":"facetype_of_cellface(_, k)\n\n\nGeometries of faces of 3D hexahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.facetype_of_cellface-Tuple{Type{<:Parallelepiped3D}, Any}","page":"Shape specifications","title":"ExtendableGrids.facetype_of_cellface","text":"facetype_of_cellface(_, k)\n\n\nGeometries of faces of 3D parallelepiped\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.facetype_of_cellface-Tuple{Type{<:Quadrilateral2D}, Any}","page":"Shape specifications","title":"ExtendableGrids.facetype_of_cellface","text":"facetype_of_cellface(_, k)\n\n\nGeometries of faces of 2D quadrilateral\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.facetype_of_cellface-Tuple{Type{<:Tetrahedron3D}, Any}","page":"Shape specifications","title":"ExtendableGrids.facetype_of_cellface","text":"facetype_of_cellface(_, k)\n\n\nGeometries of faces of 3D tetrahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.facetype_of_cellface-Tuple{Type{<:Triangle2D}, Any}","page":"Shape specifications","title":"ExtendableGrids.facetype_of_cellface","text":"facetype_of_cellface(_, k)\n\n\nGeometries of faces of 2D triangle\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_celledgenodes-Tuple{Type{<:AbstractElementGeometry1D}}","page":"Shape specifications","title":"ExtendableGrids.local_celledgenodes","text":"local_celledgenodes(_)\n\n\nCell-edge node numbering for 1D edge\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_celledgenodes-Tuple{Type{<:Hexahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.local_celledgenodes","text":"local_celledgenodes(_)\n\n\nCell-edge node numbering for 3D hexahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_celledgenodes-Tuple{Type{<:Quadrilateral2D}}","page":"Shape specifications","title":"ExtendableGrids.local_celledgenodes","text":"local_celledgenodes(_)\n\n\nCell-edge node numbering for 2D quadrilateral\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_celledgenodes-Tuple{Type{<:Tetrahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.local_celledgenodes","text":"local_celledgenodes(_)\n\n\nCell-edge node numbering for 3D tetrahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_celledgenodes-Tuple{Type{<:Triangle2D}}","page":"Shape specifications","title":"ExtendableGrids.local_celledgenodes","text":"local_celledgenodes(_)\n\n\nCell-edge node numbering for 2D triangle\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_celledgenodes-Tuple{Type{Vertex0D}}","page":"Shape specifications","title":"ExtendableGrids.local_celledgenodes","text":"local_celledgenodes(_)\n\n\nCell-edge node numbering for 1D edge\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_cellfacenodes-Tuple{Type{<:AbstractElementGeometry1D}}","page":"Shape specifications","title":"ExtendableGrids.local_cellfacenodes","text":"local_cellfacenodes(_)\n\n\nCell-face node numbering for 1D edge\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_cellfacenodes-Tuple{Type{<:Hexahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.local_cellfacenodes","text":"local_cellfacenodes(_)\n\n\nCell-face node numbering for 3D hexahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_cellfacenodes-Tuple{Type{<:Quadrilateral2D}}","page":"Shape specifications","title":"ExtendableGrids.local_cellfacenodes","text":"local_cellfacenodes(_)\n\n\nCell-face node numbering for 2D quadrilateral\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_cellfacenodes-Tuple{Type{<:Tetrahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.local_cellfacenodes","text":"local_cellfacenodes(_)\n\n\nCell-face node numbering for 3D tetrahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.local_cellfacenodes-Tuple{Type{<:Triangle2D}}","page":"Shape specifications","title":"ExtendableGrids.local_cellfacenodes","text":"local_cellfacenodes(_)\n\n\nCell-face node numbering for 2D triangle\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_edges-Tuple{ExtendableGrid}","page":"Shape specifications","title":"ExtendableGrids.num_edges","text":"num_edges(grid)\n\n\nNumber of edges in grid.\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_edges-Tuple{Type{<:AbstractElementGeometry0D}}","page":"Shape specifications","title":"ExtendableGrids.num_edges","text":"num_edges(_)\n\n\nNumber of edges of 0D vertex\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_edges-Tuple{Type{<:AbstractElementGeometry1D}}","page":"Shape specifications","title":"ExtendableGrids.num_edges","text":"num_edges(_)\n\n\nNumber of edges for 1D edge\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_edges-Tuple{Type{<:Quadrilateral2D}}","page":"Shape specifications","title":"ExtendableGrids.num_edges","text":"num_edges(_)\n\n\nNumber of edges in 2D quadrilateral\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_edges-Tuple{Type{<:Tetrahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.num_edges","text":"num_edges(_)\n\n\nNumber of edges in 3D tetrahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_edges-Tuple{Type{<:Triangle2D}}","page":"Shape specifications","title":"ExtendableGrids.num_edges","text":"num_edges(_)\n\n\nNumber of edges in 2D triangle\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_edges-Tuple{Type{Edge1D}}","page":"Shape specifications","title":"ExtendableGrids.num_edges","text":"num_edges(_)\n\n\nNumber of edges of 1D edge\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_faces-Tuple{Type{<:AbstractElementGeometry0D}}","page":"Shape specifications","title":"ExtendableGrids.num_faces","text":"num_faces(_)\n\n\nNumber of faces of 0D vertex\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_faces-Tuple{Type{<:AbstractElementGeometry1D}}","page":"Shape specifications","title":"ExtendableGrids.num_faces","text":"num_faces(_)\n\n\nNumber of faces for 1D edge\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_faces-Tuple{Type{<:Quadrilateral2D}}","page":"Shape specifications","title":"ExtendableGrids.num_faces","text":"num_faces(_)\n\n\nNumber of faces in 2D quadrilateral\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_faces-Tuple{Type{<:Tetrahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.num_faces","text":"num_faces(_)\n\n\nNumber of faces in 3D tetrahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_faces-Tuple{Type{<:Triangle2D}}","page":"Shape specifications","title":"ExtendableGrids.num_faces","text":"num_faces(_)\n\n\nNumber of faces in 2D triangle\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_nodes-Tuple{Type{<:AbstractElementGeometry0D}}","page":"Shape specifications","title":"ExtendableGrids.num_nodes","text":"num_nodes(_)\n\n\nNumber of nodes of 0D vertex\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_nodes-Tuple{Type{<:AbstractElementGeometry1D}}","page":"Shape specifications","title":"ExtendableGrids.num_nodes","text":"num_nodes(_)\n\n\nNumber of nodes for 1D edge\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_nodes-Tuple{Type{<:Hexahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.num_nodes","text":"num_nodes(_)\n\n\nNumber of nodes in 3D hexahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_nodes-Tuple{Type{<:Quadrilateral2D}}","page":"Shape specifications","title":"ExtendableGrids.num_nodes","text":"num_nodes(_)\n\n\nNumber of nodes in 2D quadrilateral\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_nodes-Tuple{Type{<:Tetrahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.num_nodes","text":"num_nodes(_)\n\n\nNumber of nodes in 3D tetrahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.num_nodes-Tuple{Type{<:Triangle2D}}","page":"Shape specifications","title":"ExtendableGrids.num_nodes","text":"num_nodes(_)\n\n\nNumber of nodes in 2D triangle\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.refcoords_for_geometry-Tuple{Type{<:AbstractElementGeometry0D}}","page":"Shape specifications","title":"ExtendableGrids.refcoords_for_geometry","text":"refcoords_for_geometry(_)\n\n\nCoordinates of reference geometry of 0D vertex\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.refcoords_for_geometry-Tuple{Type{<:AbstractElementGeometry1D}}","page":"Shape specifications","title":"ExtendableGrids.refcoords_for_geometry","text":"refcoords_for_geometry(_)\n\n\nCoordinates of reference geometry of 1D edge\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.refcoords_for_geometry-Tuple{Type{<:Hexahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.refcoords_for_geometry","text":"refcoords_for_geometry(_)\n\n\nCoordinates of reference geometry of 3D hexahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.refcoords_for_geometry-Tuple{Type{<:Quadrilateral2D}}","page":"Shape specifications","title":"ExtendableGrids.refcoords_for_geometry","text":"refcoords_for_geometry(_)\n\n\nCoordinates of reference geometry of 2D quadrilateral\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.refcoords_for_geometry-Tuple{Type{<:Tetrahedron3D}}","page":"Shape specifications","title":"ExtendableGrids.refcoords_for_geometry","text":"refcoords_for_geometry(_)\n\n\nCoordinates of reference geometry of 3D tetrahedron\n\n\n\n\n\n","category":"method"},{"location":"shape_specs/#ExtendableGrids.refcoords_for_geometry-Tuple{Type{<:Triangle2D}}","page":"Shape specifications","title":"ExtendableGrids.refcoords_for_geometry","text":"refcoords_for_geometry(_)\n\n\nCoordinates of reference geometry of 2D triangle\n\n\n\n\n\n","category":"method"},{"location":"tdict/#The-TDict-interface-pattern","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"","category":"section"},{"location":"tdict/","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"Here we describe the idea behind the data structure used in this package. TDict means: extendable containers with type stable content access and lazy content creation via the Julia type system.","category":"page"},{"location":"tdict/#Problem-to-be-addressed","page":"The TDict interface pattern","title":"Problem to be addressed","text":"","category":"section"},{"location":"tdict/","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"In certain contexts it is desirable to use containers with core components which are user extendable and allow for type stable component acces. Moreover, some components are necessary on demand only, so they should be created lazily. Furthermore, there should be a kind of safety protocol which prevents errors from typos in component names etc.","category":"page"},{"location":"tdict/","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"Julia default data structures do not provide these properties.","category":"page"},{"location":"tdict/#struct","page":"The TDict interface pattern","title":"struct","text":"","category":"section"},{"location":"tdict/","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"Julia structs with proper field type annotations guarantee type stability\nJulia structs are not extendable, fields and their types are fixed upon definition\nIf we don't fix types of struct fields they become Any and a source for type instability\nThe situation could be fixed if getfield could be overloaded but it cant't","category":"page"},{"location":"tdict/#Dict","page":"The TDict interface pattern","title":"Dict","text":"","category":"section"},{"location":"tdict/","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"Plain Dicts with flexible value types are a source of type instability\nDicts with strings as keys needs a meta protocol to handle semantics of keys which at the end probably hinges on string comparison which will make things slow\nDicts with symbols as keys still need this meta protocol\nSame for the implementation of a lazy evaluation protocol\nIf a dict contains components of different types, component access will not be typestable","category":"page"},{"location":"tdict/#Proposed-solution:","page":"The TDict interface pattern","title":"Proposed solution:","text":"","category":"section"},{"location":"tdict/","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"Harness the power of the Julia type system: ","category":"page"},{"location":"tdict/","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"Use a struct containing a Dict with DataType as keys. Every key is a type.\nUse type hierarchies to manage different value classes\nUse the type system to dispatch between getindex/setindex! methods for keys\nExtension requires declaring new types, keys can be only existing types almost removing typos as sources for errors\nLazy extension is managed bye an instantiate method called by getindex if necessary\nComponent access is made type stable by type dispatchedgetindex methods\nComponent insertion is made safe by having setindex! calling a veryform method","category":"page"},{"location":"tdict/#Pros","page":"The TDict interface pattern","title":"Pros","text":"","category":"section"},{"location":"tdict/","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"See above ...","category":"page"},{"location":"tdict/#Cons","page":"The TDict interface pattern","title":"Cons","text":"","category":"section"},{"location":"tdict/","page":"The TDict interface pattern","title":"The TDict interface pattern","text":"Implemented using a Dict, so access is inherently slower than access to a component of a struct. Therefore it is not well suited for inner loops.","category":"page"},{"location":"extendablegrid/#Extendable-grid","page":"Extendable grid","title":"Extendable grid","text":"","category":"section"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"An ExtendableGrid in form of a dictionary with types as keys and type stable value access. This means that grid components are accessed as dict entries, e.g. grid[Coordinates] . The rationale of this approach is explained here.","category":"page"},{"location":"extendablegrid/#Notations","page":"Extendable grid","title":"Notations","text":"","category":"section"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"A grid is assumed to be a subset of components of a polyhedral complex in d-dimensional space. We distinguish the following element classes characterized by their dimension:","category":"page"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"Element class Meaning\nNode 0-dimensional node\nEdge 1-dimensional line connecting two neigboring nodes\nFace codimension 1 object separating a cell from outer space or neigboring cell\nCell codimension 0 object\nBFace Face situated at inner or domain boundary\nRegion number to be used to characterize subdomains, contacts etc.","category":"page"},{"location":"extendablegrid/#Grid-components","page":"Extendable grid","title":"Grid components","text":"","category":"section"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"Grid components are accessed like Dict entries, the keys must be subtypes of AbstractGridComponent.","category":"page"},{"location":"extendablegrid/#Basic-set-of-grid-components","page":"Extendable grid","title":"Basic set of grid components","text":"","category":"section"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"Upon construction, an ExtendableGrid needs to be provided with the basic set of grid components denoted by the following component type keys:","category":"page"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"Component type key Meaning\nCoordinates Coordinates of the vertices of the grid cells\nCellNodes Adjacency describing the nodes of grid cell\nCellGeometries Abstract array of subtypes of AbstractElementGeometry describing the geometry of each cell\nCellRegions Abstract array of integers describing region numbers\nBFaceNodes Adjacency structure describing the nodes corresponding to each grid boundary face\nBFaceGeometries Abstract array of subtypes of AbstractElementGeometry describing the geometry of each boundary face\nBFaceRegions Abstract array of integers describig region numbers\nCoordinateSystem Abstract type describing the coordinate system to be used","category":"page"},{"location":"extendablegrid/#Hierarchy-of-component-type-keys","page":"Extendable grid","title":"Hierarchy of component type keys","text":"","category":"section"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"The list of components can be printed using the gridcomponents method.","category":"page"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"using ExtendableGrids # hide\ngridcomponents() #hide","category":"page"},{"location":"extendablegrid/#Additional-components","page":"Extendable grid","title":"Additional components","text":"","category":"section"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"Additional components can be added by defining a subtype of AbstractGridComponent or a fitting subtype thereof, and assigning the value to the corresponding Dict entry:","category":"page"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"using ExtendableGrids # hide\ng=simplexgrid([1,2,3,4.0])\nabstract type MyComponent <: AbstractGridComponent end\ng[MyComponent]=13\nshow(g)","category":"page"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"Alternatively, component creation can be perfomed lazily. For this purpose one needs to define an instantiate method:","category":"page"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"using ExtendableGrids # hide\nabstract type NodeCells <: AbstractGridAdjacency end\nExtendableGrids.instantiate(grid, ::Type{NodeCells})=atranspose(grid[CellNodes])\ng=simplexgrid([1,2,3,4.0])\nshow(g[NodeCells])","category":"page"},{"location":"extendablegrid/#Grid-API","page":"Extendable grid","title":"Grid API","text":"","category":"section"},{"location":"extendablegrid/","page":"Extendable grid","title":"Extendable grid","text":"Modules = [ExtendableGrids]\nPages = [\"extendablegrid.jl\"]","category":"page"},{"location":"extendablegrid/#ExtendableGrids.ElementInfo","page":"Extendable grid","title":"ExtendableGrids.ElementInfo","text":"const ElementInfo{T}=Union{Vector{T},VectorOfConstants{T}}\n\nUnion type for element information arrays. If all elements have the same information, it can be stored in an economical form as a VectorOfConstants.\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractElementGeometries","page":"Extendable grid","title":"ExtendableGrids.AbstractElementGeometries","text":"abstract type AbstractElementGeometries <: AbstractGridComponent\n\nArray of element geometry information. \n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractElementRegions","page":"Extendable grid","title":"ExtendableGrids.AbstractElementRegions","text":"abstract type AbstractElementRegions <: AbstractGridComponent\n\nArray of element region number information. \n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractGridAdjacency","page":"Extendable grid","title":"ExtendableGrids.AbstractGridAdjacency","text":"abstract type AbstractGridAdjacency <: AbstractGridComponent\n\nAny kind of adjacency between grid components\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractGridComponent","page":"Extendable grid","title":"ExtendableGrids.AbstractGridComponent","text":"abstract type AbstractGridComponent <: AbstractExtendableGridApexType\n\nApex type for grid components.\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractGridFloatArray1D","page":"Extendable grid","title":"ExtendableGrids.AbstractGridFloatArray1D","text":"abstract type AbstractGridFloatArray1D <: AbstractGridComponent\n\n1D Array of floating point data\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractGridFloatArray2D","page":"Extendable grid","title":"ExtendableGrids.AbstractGridFloatArray2D","text":"abstract type AbstractGridFloatArray2D <: AbstractGridComponent\n\n2D Array of floating point data\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractGridFloatConstant","page":"Extendable grid","title":"ExtendableGrids.AbstractGridFloatConstant","text":"abstract type AbstractGridFloatConstant <: AbstractGridComponent\n\nFloating point number\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractGridIntegerArray1D","page":"Extendable grid","title":"ExtendableGrids.AbstractGridIntegerArray1D","text":"abstract type AbstractGridIntegerArray1D <: AbstractGridComponent\n\n1D Array of interger data\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractGridIntegerArray2D","page":"Extendable grid","title":"ExtendableGrids.AbstractGridIntegerArray2D","text":"abstract type AbstractGridIntegerArray2D <: AbstractGridComponent\n\n2D Array of integer data\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.AbstractGridIntegerConstant","page":"Extendable grid","title":"ExtendableGrids.AbstractGridIntegerConstant","text":"abstract type AbstractGridIntegerConstant <: AbstractGridComponent\n\nInteger number\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.BEdgeRegions","page":"Extendable grid","title":"ExtendableGrids.BEdgeRegions","text":"abstract type BEdgeRegions <: AbstractElementRegions\n\nBoundary edge region number per boundary edge\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.BFaceGeometries","page":"Extendable grid","title":"ExtendableGrids.BFaceGeometries","text":"Description of boundary face geometries\n\nabstract type BFaceGeometries <: AbstractElementGeometries\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.BFaceNodes","page":"Extendable grid","title":"ExtendableGrids.BFaceNodes","text":"abstract type BFaceNodes <: AbstractGridAdjacency\n\nAdjacency describing nodes per grid boundary face\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.BFaceRegions","page":"Extendable grid","title":"ExtendableGrids.BFaceRegions","text":"abstract type BFaceRegions <: AbstractElementRegions\n\nBoundary region number per boundary face\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.CellGeometries","page":"Extendable grid","title":"ExtendableGrids.CellGeometries","text":"abstract type CellGeometries <: AbstractElementGeometries\n\nDescription of cell geometries\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.CellNodes","page":"Extendable grid","title":"ExtendableGrids.CellNodes","text":"abstract type CellNodes <: AbstractGridAdjacency\n\nAdjacency describing nodes per grid cell\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.CellRegions","page":"Extendable grid","title":"ExtendableGrids.CellRegions","text":"abstract type CellRegions <: AbstractElementRegions\n\nCell region number per cell\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.CoordinateSystem","page":"Extendable grid","title":"ExtendableGrids.CoordinateSystem","text":"abstract type CoordinateSystem <: AbstractGridComponent\n\nCoordinate system\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.Coordinates","page":"Extendable grid","title":"ExtendableGrids.Coordinates","text":"abstract type Coordinates <: AbstractGridFloatArray2D\n\nNode coordinates\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.ExtendableGrid","page":"Extendable grid","title":"ExtendableGrids.ExtendableGrid","text":"mutable struct ExtendableGrid{Tc, Ti}\n\nGrid type wrapping Dict\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.NumBEdgeRegions","page":"Extendable grid","title":"ExtendableGrids.NumBEdgeRegions","text":"abstract type NumBEdgeRegions <: ExtendableGrids.AbstractGridIntegerConstant\n\nNumber of boundary edge regions \n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.NumBFaceRegions","page":"Extendable grid","title":"ExtendableGrids.NumBFaceRegions","text":"abstract type NumBFaceRegions <: ExtendableGrids.AbstractGridIntegerConstant\n\nNumber of boundary face regions \n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#ExtendableGrids.NumCellRegions","page":"Extendable grid","title":"ExtendableGrids.NumCellRegions","text":"abstract type NumCellRegions <: ExtendableGrids.AbstractGridIntegerConstant\n\nNumber of cell regions\n\n\n\n\n\n","category":"type"},{"location":"extendablegrid/#Base.delete!-Tuple{ExtendableGrid, Type{<:AbstractGridComponent}}","page":"Extendable grid","title":"Base.delete!","text":"delete!(\n grid::ExtendableGrid,\n T::Type{<:AbstractGridComponent}\n) -> Dict{Type{<:AbstractGridComponent}, Any}\n\n\nRemove grid component\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#Base.get!-Tuple{ExtendableGrid, Type{<:AbstractGridComponent}}","page":"Extendable grid","title":"Base.get!","text":"get!(\n grid::ExtendableGrid,\n T::Type{<:AbstractGridComponent}\n) -> Any\n\n\nTo be called by getindex. This triggers lazy creation of non-existing gridcomponents\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#Base.getindex-Tuple{ExtendableGrid, Type{<:AbstractGridComponent}}","page":"Extendable grid","title":"Base.getindex","text":"Base.getindex(grid::ExtendableGrid,T::Type{<:AbstractGridComponent})\n\nGeneric method for obtaining grid component.\n\nThis method is mutating in the sense that non-existing grid components are created on demand.\n\nDue to the fact that components are stored as Any the return value triggers type instability. To prevent this, specialized methods must be (and are) defined.\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#Base.haskey-Tuple{ExtendableGrid, Any}","page":"Extendable grid","title":"Base.haskey","text":"haskey(g::ExtendableGrid, k) -> Bool\n\n\nCheck if key is in grid\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#Base.keys-Tuple{ExtendableGrid}","page":"Extendable grid","title":"Base.keys","text":"keys(\n g::ExtendableGrid\n) -> Base.KeySet{Type{<:AbstractGridComponent}, Dict{Type{<:AbstractGridComponent}, Any}}\n\n\nKeys in grid\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#Base.map-Tuple{Function, ExtendableGrid}","page":"Extendable grid","title":"Base.map","text":"map(f::Function, grid::ExtendableGrid) -> Any\n\n\nMap a function onto node coordinates of grid\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#Base.setindex!-Tuple{ExtendableGrid, Any, Type{<:AbstractGridComponent}}","page":"Extendable grid","title":"Base.setindex!","text":"setindex!(\n grid::ExtendableGrid,\n v,\n T::Type{<:AbstractGridComponent}\n) -> Any\n\n\nSet new grid component\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.coord_type-Union{Tuple{ExtendableGrid{Tc, Ti}}, Tuple{Ti}, Tuple{Tc}} where {Tc, Ti}","page":"Extendable grid","title":"ExtendableGrids.coord_type","text":"coord_type(grid)\n\n\nType of coordinates in grid\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.dim_grid-Tuple{ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.dim_grid","text":"dim_grid(grid)\n\n\nGrid dimension dimension of grid (larges element dimension)\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.dim_space-Tuple{ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.dim_space","text":"dim_space(grid)\n\n\nSpace dimension of grid\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.gridcomponents-Tuple{}","page":"Extendable grid","title":"ExtendableGrids.gridcomponents","text":"gridcomponents()\n\n\nPrint the hierarchy of grid component key types (subtypes of AbstractGridComponent. This includes additionally user defined subptypes.\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.index_type-Union{Tuple{ExtendableGrid{Tc, Ti}}, Tuple{Ti}, Tuple{Tc}} where {Tc, Ti}","page":"Extendable grid","title":"ExtendableGrids.index_type","text":"index_type(grid)\n\n\nType of indices\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.instantiate","page":"Extendable grid","title":"ExtendableGrids.instantiate","text":"\"Hook\" for methods instantiating lazy components. \n\n\n\n\n\n","category":"function"},{"location":"extendablegrid/#ExtendableGrids.instantiate-Tuple{Any, Type{NumBEdgeRegions}}","page":"Extendable grid","title":"ExtendableGrids.instantiate","text":"instantiate(grid, _::Type{NumBEdgeRegions}) -> Any\n\n\nInstantiate number of boundary edge regions\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.instantiate-Tuple{Any, Type{NumBFaceRegions}}","page":"Extendable grid","title":"ExtendableGrids.instantiate","text":"instantiate(grid, _::Type{NumBFaceRegions}) -> Any\n\n\nInstantiate number of bface regions\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.instantiate-Tuple{Any, Type{NumCellRegions}}","page":"Extendable grid","title":"ExtendableGrids.instantiate","text":"instantiate(grid, _::Type{NumCellRegions}) -> Any\n\n\nInstantiate number of cell regions\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.num_bedgeregions-Tuple{ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.num_bedgeregions","text":"num_bedgeregions(grid::ExtendableGrid) -> Any\n\n\nMaximum boundary edge region numbers\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.num_bedges-Tuple{ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.num_bedges","text":"num_bedges(grid::ExtendableGrid) -> Int64\n\n\nNumber of boundary edges in grid.\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.num_bfaceregions-Tuple{ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.num_bfaceregions","text":"num_bfaceregions(grid::ExtendableGrid) -> Any\n\n\nMaximum boundary face region numbers\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.num_bfaces-Tuple{ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.num_bfaces","text":"num_bfaces(grid::ExtendableGrid) -> Int64\n\n\nNumber of boundary faces in grid.\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.num_cellregions-Tuple{ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.num_cellregions","text":"num_cellregions(grid::ExtendableGrid) -> Any\n\n\nMaximum cell region number\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.num_cells-Tuple{ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.num_cells","text":"num_cells(grid::ExtendableGrid) -> Int64\n\n\nNumber of cells in grid\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.num_nodes-Tuple{ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.num_nodes","text":"num_nodes(grid)\n\n\nNumber of nodes in grid\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.seemingly_equal-Tuple{AbstractArray, AbstractArray}","page":"Extendable grid","title":"ExtendableGrids.seemingly_equal","text":"seemingly_equal(array1, array2)\n\n\nCheck for seeming equality of two arrays by random sample.\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.seemingly_equal-Tuple{ExtendableGrid, ExtendableGrid}","page":"Extendable grid","title":"ExtendableGrids.seemingly_equal","text":"seemingly_equal(grid1, grid2; sort=false, confidence=:full\n\nRecursively check seeming equality of two grids. Seemingly means that long arrays are only compared via random samples.\n\nKeyword args:\n\nsort: if true, sort grid points\nconfidence: Confidence level: \n:low : Point numbers etc are the same\n:full : all arrays are equal (besides the coordinate array, the arrays only have to be equal up to permutations)\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.veryform-Tuple{ExtendableGrid, Any, Type{<:AbstractGridComponent}}","page":"Extendable grid","title":"ExtendableGrids.veryform","text":"veryform(\n grid::ExtendableGrid,\n v,\n _::Type{<:AbstractGridComponent}\n) -> Any\n\n\nDefault veryform method.\n\n\"veryform\" means \"verify and/or transform\" and is called to check and possibly transform components to be added to the grid via setindex!.\n\nThe default method just passes data through.\n\n\n\n\n\n","category":"method"},{"location":"extendablegrid/#ExtendableGrids.veryform-Union{Tuple{Ti}, Tuple{Tc}, Tuple{ExtendableGrid{Tc, Ti}, Any, Type{<:AbstractGridAdjacency}}} where {Tc, Ti}","page":"Extendable grid","title":"ExtendableGrids.veryform","text":"veryform(grid::ExtendableGrid{Tc,Ti},v,T::Type{<:AbstractGridAdjacency}) where{Tc,Ti}\n\nCheck proper type of adjacencies upon insertion\n\n\n\n\n\n","category":"method"},{"location":"typehierarchy/#Type-hierarchy","page":"Type hierarchy","title":"Type hierarchy","text":"","category":"section"},{"location":"typehierarchy/","page":"Type hierarchy","title":"Type hierarchy","text":"The package defines a hierarchy of abstract types to handle grid compoments. The full tree is listed here:","category":"page"},{"location":"typehierarchy/","page":"Type hierarchy","title":"Type hierarchy","text":"using ExtendableGrids # hide\ntypehierarchy() #hide","category":"page"},{"location":"typehierarchy/#API","page":"Type hierarchy","title":"API","text":"","category":"section"},{"location":"typehierarchy/","page":"Type hierarchy","title":"Type hierarchy","text":"Modules = [ExtendableGrids]\nPages = [\"typehierarchy.jl\"]","category":"page"},{"location":"typehierarchy/#ExtendableGrids.AbstractExtendableGridApexType","page":"Type hierarchy","title":"ExtendableGrids.AbstractExtendableGridApexType","text":"abstract type AbstractExtendableGridApexType\n\nApex type of all abstract types in this hierarchy.\n\n\n\n\n\n","category":"type"},{"location":"typehierarchy/#AbstractTrees.children-Tuple{Type}","page":"Type hierarchy","title":"AbstractTrees.children","text":"children(T::Type) -> Union{Vector{Type}, Vector{Any}}\n\n\nDefine children for types.\n\n\n\n\n\n","category":"method"},{"location":"typehierarchy/#ExtendableGrids.typehierarchy-Tuple{}","page":"Type hierarchy","title":"ExtendableGrids.typehierarchy","text":"typehierarchy()\n\n\nPrint complete type hierachy for ExtendableGrids\n\n\n\n\n\n","category":"method"},{"location":"script_examples/examples2d/#2D-Grid-examples","page":"examples2d","title":"2D Grid examples","text":"","category":"section"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"using Triangulate, ExtendableGrids, SimplexGridFactory","category":"page"},{"location":"script_examples/examples2d/#Rectangle","page":"examples2d","title":"Rectangle","text":"","category":"section"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"function rectangle()\n X = collect(0:0.05:1)\n Y = collect(0:0.05:1)\n simplexgrid(X, X)\nend","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"(Image: )","category":"page"},{"location":"script_examples/examples2d/#Rectangle-with-local-refinement","page":"examples2d","title":"Rectangle with local refinement","text":"","category":"section"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"function rectangle_localref()\n hmin = 0.01\n hmax = 0.1\n XLeft = geomspace(0.0, 0.5, hmax, hmin)\n XRight = geomspace(0.5, 1.0, hmin, hmax)\n X = glue(XLeft, XRight)\n simplexgrid(X, X)\nend","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"(Image: )","category":"page"},{"location":"script_examples/examples2d/#Rectangle-with-multiple-regions","page":"examples2d","title":"Rectangle with multiple regions","text":"","category":"section"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"function rectangle_multiregion()\n X = collect(0:0.05:1)\n Y = collect(0:0.05:1)\n grid = simplexgrid(X, Y)\n cellmask!(grid, [0.0, 0.0], [1.0, 0.5], 3)\n bfacemask!(grid, [0.0, 0.0], [0.0, 0.5], 5)\n bfacemask!(grid, [1.0, 0.0], [1.0, 0.5], 6)\n bfacemask!(grid, [0.0, 0.5], [1.0, 0.5], 7)\nend","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"(Image: )","category":"page"},{"location":"script_examples/examples2d/#Subgrid-from-rectangle","page":"examples2d","title":"Subgrid from rectangle","text":"","category":"section"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"function rectangle_subgrid()\n X = collect(0:0.05:1)\n Y = collect(0:0.05:1)\n grid = simplexgrid(X, Y)\n rect!(grid, [0.25, 0.25], [0.75, 0.75]; region = 2, bregion = 5)\n subgrid(grid, [1])\nend","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"(Image: )","category":"page"},{"location":"script_examples/examples2d/#Rect2d-with-bregion-function","page":"examples2d","title":"Rect2d with bregion function","text":"","category":"section"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"Here, we use function as bregion parameter - this allows to have no bfaces at the interface between the two rects.","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"function rect2d_bregion_function()\n X = collect(0:0.5:10)\n Y = collect(0:0.5:10)\n grid = simplexgrid(X, Y)\n rect!(grid, [5, 4], [9, 6]; region = 2, bregions = [5, 5, 5, 5])\n\n rect!(grid, [4, 2], [5, 8]; region = 2, bregion = cur -> cur == 5 ? 0 : 8)\n\n subgrid(grid, [2])\nend","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"(Image: )","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"function sorted_subgrid(; maxvolume = 0.01)\n builder = SimplexGridBuilder(; Generator = Triangulate)\n\n p1 = point!(builder, 0, 0)\n p2 = point!(builder, 1, 0)\n p3 = point!(builder, 1, 2)\n p4 = point!(builder, 0, 1)\n p5 = point!(builder, -1, 2)\n\n facetregion!(builder, 1)\n facet!(builder, p1, p2)\n facetregion!(builder, 2)\n facet!(builder, p2, p3)\n facetregion!(builder, 3)\n facet!(builder, p3, p4)\n facetregion!(builder, 4)\n facet!(builder, p4, p5)\n facetregion!(builder, 5)\n facet!(builder, p5, p1)\n\n g = simplexgrid(builder; maxvolume)\n sg = subgrid(g, [2]; boundary = true, transform = (a, b) -> a[1] = b[2])\n f = map((x, y) -> sin(3x) * cos(3y), g)\n sf = view(f, sg)\n g, sg, sf\nend","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"(Image: )","category":"page"},{"location":"script_examples/examples2d/#CI-callbacks-for-[ExampleJuggler.jl](https://github.com/j-fu/ExampleJuggler.jl)","page":"examples2d","title":"CI callbacks for ExampleJuggler.jl","text":"","category":"section"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"Unit tests","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"using Test\nfunction runtests()\n @test numbers_match(rectangle(), 441, 800, 80)\n @test numbers_match(rectangle_localref(), 729, 1352, 104)\n @test numbers_match(rectangle_multiregion(), 441, 800, 100)\n @test numbers_match(rectangle_subgrid(), 360, 600, 120)\n @test numbers_match(rect2d_bregion_function(), 79, 112, 44)\n\n g, sg, sf = sorted_subgrid()\n @test numbers_match(g, 187, 306, 66)\n @test numbers_match(sg, 17, 16, 0)\n @test issorted(view(sg[Coordinates], 1, :))\nend","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"Plot generation","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"using GridVisualize\nfunction generateplots(picdir; Plotter = nothing)\n if isdefined(Plotter, :Makie)\n size = (300, 300)\n Plotter.save(joinpath(picdir, \"rectangle.svg\"), gridplot(rectangle(); Plotter, size))\n Plotter.save(joinpath(picdir, \"rectangle_localref.svg\"), gridplot(rectangle_localref(); Plotter, size))\n Plotter.save(joinpath(picdir, \"rectangle_multiregion.svg\"), gridplot(rectangle_multiregion(); Plotter, size))\n Plotter.save(joinpath(picdir, \"rectangle_subgrid.svg\"), gridplot(rectangle_subgrid(); Plotter, size))\n Plotter.save(joinpath(picdir, \"rect2d_bregion_function.svg\"), gridplot(rect2d_bregion_function(); Plotter, size))\n\n g, sg, sf = sorted_subgrid()\n p = GridVisualizer(; Plotter, layout = (1, 3), size = (800, 300))\n gridplot!(p[1, 1], g)\n gridplot!(p[1, 2], sg)\n scalarplot!(p[1, 3], sg, sf)\n fname = joinpath(picdir, \"sorted_subgrid.svg\")\n Plotter.save(fname, reveal(p))\n end\nend","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"","category":"page"},{"location":"script_examples/examples2d/","page":"examples2d","title":"examples2d","text":"This page was generated using Literate.jl.","category":"page"},{"location":"vectorofconstants/#Vector-of-constants","page":"Vector of constants","title":"Vector of constants","text":"","category":"section"},{"location":"vectorofconstants/","page":"Vector of constants","title":"Vector of constants","text":"Datatype to store vector with a constant value.","category":"page"},{"location":"vectorofconstants/#API","page":"Vector of constants","title":"API","text":"","category":"section"},{"location":"vectorofconstants/","page":"Vector of constants","title":"Vector of constants","text":"Modules = [ExtendableGrids]\nPages = [\"vectorofconstants.jl\"]","category":"page"},{"location":"vectorofconstants/#ExtendableGrids.VectorOfConstants","page":"Vector of constants","title":"ExtendableGrids.VectorOfConstants","text":"struct VectorOfConstants{T, Tl} <: AbstractArray{T, 1}\n\nVector with constant value\n\n\n\n\n\n","category":"type"},{"location":"vectorofconstants/#Base.getindex-Tuple{VectorOfConstants, Any}","page":"Vector of constants","title":"Base.getindex","text":"getindex(v::VectorOfConstants, i) -> Any\n\n\nAccess\n\n\n\n\n\n","category":"method"},{"location":"vectorofconstants/#Base.iterate-Tuple{VectorOfConstants, Any}","page":"Vector of constants","title":"Base.iterate","text":"iterate(\n v::VectorOfConstants,\n state\n) -> Union{Nothing, Tuple{Any, Any}}\n\n\nIterator\n\n\n\n\n\n","category":"method"},{"location":"vectorofconstants/#Base.iterate-Tuple{VectorOfConstants}","page":"Vector of constants","title":"Base.iterate","text":"iterate(v::VectorOfConstants) -> Tuple{Any, Int64}\n\n\nIterator\n\n\n\n\n\n","category":"method"},{"location":"vectorofconstants/#Base.length-Tuple{VectorOfConstants}","page":"Vector of constants","title":"Base.length","text":"length(v::VectorOfConstants) -> Any\n\n\nLength\n\n\n\n\n\n","category":"method"},{"location":"vectorofconstants/#Base.size-Tuple{VectorOfConstants}","page":"Vector of constants","title":"Base.size","text":"size(v::VectorOfConstants) -> Tuple{Any}\n\n\nSize\n\n\n\n\n\n","category":"method"},{"location":"vectorofconstants/#Base.unique-Tuple{VectorOfConstants}","page":"Vector of constants","title":"Base.unique","text":"unique(v::VectorOfConstants) -> Vector\n\n\nShortcut for unique\n\n\n\n\n\n","category":"method"},{"location":"elementgeometry/#Element-geometry","page":"Element geometry","title":"Element geometry","text":"","category":"section"},{"location":"elementgeometry/","page":"Element geometry","title":"Element geometry","text":"Element geometries are described via abstract types. The list of element geometries systems can be obtained with the elementgeometries method:","category":"page"},{"location":"elementgeometry/","page":"Element geometry","title":"Element geometry","text":"using ExtendableGrids # hide\nelementgeometries() #hide","category":"page"},{"location":"elementgeometry/#API","page":"Element geometry","title":"API","text":"","category":"section"},{"location":"elementgeometry/","page":"Element geometry","title":"Element geometry","text":"Modules = [ExtendableGrids]\nPages = [\"elementgeometry.jl\"]","category":"page"},{"location":"elementgeometry/#ExtendableGrids.AbstractElementGeometry","page":"Element geometry","title":"ExtendableGrids.AbstractElementGeometry","text":"abstract type AbstractElementGeometry <: AbstractExtendableGridApexType\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.AbstractElementGeometry0D","page":"Element geometry","title":"ExtendableGrids.AbstractElementGeometry0D","text":"abstract type AbstractElementGeometry0D <: AbstractElementGeometry\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.AbstractElementGeometry1D","page":"Element geometry","title":"ExtendableGrids.AbstractElementGeometry1D","text":"abstract type AbstractElementGeometry1D <: AbstractElementGeometry\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.AbstractElementGeometry2D","page":"Element geometry","title":"ExtendableGrids.AbstractElementGeometry2D","text":"abstract type AbstractElementGeometry2D <: AbstractElementGeometry\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.AbstractElementGeometry3D","page":"Element geometry","title":"ExtendableGrids.AbstractElementGeometry3D","text":"abstract type AbstractElementGeometry3D <: AbstractElementGeometry\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.AbstractElementGeometry4D","page":"Element geometry","title":"ExtendableGrids.AbstractElementGeometry4D","text":"abstract type AbstractElementGeometry4D <: AbstractElementGeometry\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Circle2D","page":"Element geometry","title":"ExtendableGrids.Circle2D","text":"abstract type Circle2D <: AbstractElementGeometry2D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Edge1D","page":"Element geometry","title":"ExtendableGrids.Edge1D","text":"abstract type Edge1D <: AbstractElementGeometry1D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Hexagon2D","page":"Element geometry","title":"ExtendableGrids.Hexagon2D","text":"abstract type Hexagon2D <: Polygon2D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Hexahedron3D","page":"Element geometry","title":"ExtendableGrids.Hexahedron3D","text":"abstract type Hexahedron3D <: Polyhedron3D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.HyperCube4D","page":"Element geometry","title":"ExtendableGrids.HyperCube4D","text":"abstract type HyperCube4D <: AbstractElementGeometry4D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Parallelepiped3D","page":"Element geometry","title":"ExtendableGrids.Parallelepiped3D","text":"abstract type Parallelepiped3D <: Hexahedron3D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Parallelogram2D","page":"Element geometry","title":"ExtendableGrids.Parallelogram2D","text":"abstract type Parallelogram2D <: Quadrilateral2D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Pentagon2D","page":"Element geometry","title":"ExtendableGrids.Pentagon2D","text":"abstract type Pentagon2D <: Polygon2D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Polychoron4D","page":"Element geometry","title":"ExtendableGrids.Polychoron4D","text":"abstract type Polychoron4D <: AbstractElementGeometry4D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Polygon2D","page":"Element geometry","title":"ExtendableGrids.Polygon2D","text":"abstract type Polygon2D <: AbstractElementGeometry2D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Polyhedron3D","page":"Element geometry","title":"ExtendableGrids.Polyhedron3D","text":"abstract type Polyhedron3D <: AbstractElementGeometry3D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Prism3D","page":"Element geometry","title":"ExtendableGrids.Prism3D","text":"abstract type Prism3D <: Polyhedron3D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Quadrilateral2D","page":"Element geometry","title":"ExtendableGrids.Quadrilateral2D","text":"abstract type Quadrilateral2D <: Polygon2D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Rectangle2D","page":"Element geometry","title":"ExtendableGrids.Rectangle2D","text":"abstract type Rectangle2D <: Parallelogram2D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.RectangularCuboid3D","page":"Element geometry","title":"ExtendableGrids.RectangularCuboid3D","text":"abstract type RectangularCuboid3D <: Parallelepiped3D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Sphere3D","page":"Element geometry","title":"ExtendableGrids.Sphere3D","text":"abstract type Sphere3D <: AbstractElementGeometry3D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Tetrahedron3D","page":"Element geometry","title":"ExtendableGrids.Tetrahedron3D","text":"abstract type Tetrahedron3D <: Polyhedron3D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Triangle2D","page":"Element geometry","title":"ExtendableGrids.Triangle2D","text":"abstract type Triangle2D <: Polygon2D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.TrianglePrism3D","page":"Element geometry","title":"ExtendableGrids.TrianglePrism3D","text":"abstract type TrianglePrism3D <: Prism3D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.Vertex0D","page":"Element geometry","title":"ExtendableGrids.Vertex0D","text":"abstract type Vertex0D <: AbstractElementGeometry0D\n\n\n\n\n\n","category":"type"},{"location":"elementgeometry/#ExtendableGrids.dim_element-Tuple{Type{<:AbstractElementGeometry0D}}","page":"Element geometry","title":"ExtendableGrids.dim_element","text":"dim_element(_::Type{<:AbstractElementGeometry0D}) -> Int64\n\n\n\n\n\n\n","category":"method"},{"location":"elementgeometry/#ExtendableGrids.dim_element-Tuple{Type{<:AbstractElementGeometry1D}}","page":"Element geometry","title":"ExtendableGrids.dim_element","text":"dim_element(_::Type{<:AbstractElementGeometry1D}) -> Int64\n\n\n\n\n\n\n","category":"method"},{"location":"elementgeometry/#ExtendableGrids.dim_element-Tuple{Type{<:AbstractElementGeometry2D}}","page":"Element geometry","title":"ExtendableGrids.dim_element","text":"dim_element(_::Type{<:AbstractElementGeometry2D}) -> Int64\n\n\n\n\n\n\n","category":"method"},{"location":"elementgeometry/#ExtendableGrids.dim_element-Tuple{Type{<:AbstractElementGeometry3D}}","page":"Element geometry","title":"ExtendableGrids.dim_element","text":"dim_element(_::Type{<:AbstractElementGeometry3D}) -> Int64\n\n\n\n\n\n\n","category":"method"},{"location":"elementgeometry/#ExtendableGrids.dim_element-Tuple{Type{<:AbstractElementGeometry4D}}","page":"Element geometry","title":"ExtendableGrids.dim_element","text":"dim_element(_::Type{<:AbstractElementGeometry4D}) -> Int64\n\n\n\n\n\n\n","category":"method"},{"location":"elementgeometry/#ExtendableGrids.elementgeometries-Tuple{}","page":"Element geometry","title":"ExtendableGrids.elementgeometries","text":"elementgeometries()\n\n\nList supported element geometries.\n\n\n\n\n\n","category":"method"},{"location":"tokenstream/#Token-streams","page":"Token streams","title":"Token streams","text":"","category":"section"},{"location":"tokenstream/","page":"Token streams","title":"Token streams","text":"The TokenStream struct supports reading of tokenizable ASCII files","category":"page"},{"location":"tokenstream/#API","page":"Token streams","title":"API","text":"","category":"section"},{"location":"tokenstream/","page":"Token streams","title":"Token streams","text":"Modules = [ExtendableGrids]\nPages = [\"tokenstream.jl\"]","category":"page"},{"location":"tokenstream/#ExtendableGrids.TokenStream","page":"Token streams","title":"ExtendableGrids.TokenStream","text":"mutable struct TokenStream\n\nTokenstream allows to read tokenized data from file without keeping the file ocntent in memory.\n\ninput::IOStream: Input stream\n\ntokens::Vector{SubString{String}}: Array of current tokens kept in memory.\n\nitoken::Int64: Position of actual token in tokens array\n\nlineno::Int64: Line number in IOStream\n\ncomment::Char: Comment character\n\ndlm::Function: Function telling if given character is a delimiter.\n\n\n\n\n\n","category":"type"},{"location":"tokenstream/#ExtendableGrids.TokenStream-Tuple{IOStream}","page":"Token streams","title":"ExtendableGrids.TokenStream","text":"TokenStream(input::IOStream; comment, dlm) -> TokenStream\n\n\nCreate Tokenstream with IOStream argument.\n\n\n\n\n\n","category":"method"},{"location":"tokenstream/#ExtendableGrids.TokenStream-Tuple{String}","page":"Token streams","title":"ExtendableGrids.TokenStream","text":"TokenStream(filename::String; comment, dlm) -> TokenStream\n\n\nCreate Tokenstream with file name argument.\n\n\n\n\n\n","category":"method"},{"location":"tokenstream/#ExtendableGrids.UnexpectedTokenError","page":"Token streams","title":"ExtendableGrids.UnexpectedTokenError","text":"struct UnexpectedTokenError <: Exception\n\nError thrown when the token expected in expect! is not there.\n\nfound::String\nexpected::String\nlineno::Int64\n\n\n\n\n\n","category":"type"},{"location":"tokenstream/#Base.eof-Tuple{TokenStream}","page":"Token streams","title":"Base.eof","text":"eof(tks::TokenStream) -> Bool\n\n\nCheck if all tokens have been consumed.\n\n\n\n\n\n","category":"method"},{"location":"tokenstream/#ExtendableGrids.destruct!-Tuple{TokenStream}","page":"Token streams","title":"ExtendableGrids.destruct!","text":"destruct!(tks::TokenStream)\n\n\nTokenstream destructor should close input\n\n\n\n\n\n","category":"method"},{"location":"tokenstream/#ExtendableGrids.expecttoken-Tuple{TokenStream, String}","page":"Token streams","title":"ExtendableGrids.expecttoken","text":"expecttoken(tks::TokenStream, expected::String) -> Bool\n\n\nExpect keyword token.\n\nIf token is missing, an UnexpectedTokenError is thrown If the token has been found, reading will continue at the position after the token found.\n\n\n\n\n\n","category":"method"},{"location":"tokenstream/#ExtendableGrids.gettoken-Tuple{TokenStream}","page":"Token streams","title":"ExtendableGrids.gettoken","text":"gettoken(\n tks::TokenStream\n) -> Union{Nothing, SubString{String}}\n\n\nGet next token from tokenstream.\n\n\n\n\n\n","category":"method"},{"location":"tokenstream/#ExtendableGrids.trytoken-Tuple{TokenStream, String}","page":"Token streams","title":"ExtendableGrids.trytoken","text":"trytoken(tks::TokenStream, expected::String) -> Bool\n\n\nTry for keyword token.\n\nIt token is missing, the token read is put back into stream, a value of false is returned and the next try/gettoken command continues at the same position,\n\nOtherwise, true is returned, and reading continues after the token found.\n\n\n\n\n\n","category":"method"},{"location":"script_examples/gmsh/#Gmsh-examples","page":"gmsh","title":"Gmsh examples","text":"","category":"section"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"using ExtendableGrids\nusing Gmsh: gmsh","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"Example t1 from the GMSH docs","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"function gmsh_t1()\n gmsh.initialize()\n gmsh.option.setNumber(\"General.Terminal\", 1)\n gmsh.model.add(\"t1\")\n\n lc = 1e-2\n gmsh.model.geo.addPoint(0, 0, 0, lc, 1)\n gmsh.model.geo.addPoint(0.1, 0, 0, lc, 2)\n gmsh.model.geo.addPoint(0.1, 0.3, 0, lc, 3)\n\n p4 = gmsh.model.geo.addPoint(0, 0.3, 0, lc)\n\n gmsh.model.geo.addLine(1, 2, 1)\n gmsh.model.geo.addLine(3, 2, 2)\n gmsh.model.geo.addLine(3, p4, 3)\n gmsh.model.geo.addLine(4, 1, p4)\n\n gmsh.model.geo.addCurveLoop([4, 1, -2, 3], 1)\n gmsh.model.geo.addPlaneSurface([1], 1)\n\n gmsh.model.geo.synchronize()\n\n gmsh.model.addPhysicalGroup(0, [1, 2], 1)\n gmsh.model.addPhysicalGroup(1, [1, 2], 2)\n gmsh.model.addPhysicalGroup(2, [1], 6)\n\n gmsh.model.setPhysicalName(2, 6, \"My surface\")\n\n gmsh.model.mesh.generate(2)\n grid = ExtendableGrids.simplexgrid_from_gmsh(gmsh.model)\n gmsh.finalize()\n grid\nend","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"(Image: )","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"Example t4 from the GMSH docs","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"function gmsh_t4()\n gmsh.initialize()\n\n gmsh.model.add(\"t4\")\n\n cm = 1e-02\n e1 = 4.5 * cm; e2 = 6 * cm / 2; e3 = 5 * cm / 2\n h1 = 5 * cm; h2 = 10 * cm; h3 = 5 * cm; h4 = 2 * cm; h5 = 4.5 * cm\n R1 = 1 * cm; R2 = 1.5 * cm; r = 1 * cm\n Lc1 = 0.01\n Lc2 = 0.003\n\n function hypot(a, b)\n return sqrt(a * a + b * b)\n end\n\n ccos = (-h5*R1 + e2 * hypot(h5, hypot(e2, R1))) / (h5*h5 + e2*e2)\n ssin = sqrt(1 - ccos*ccos)\n\n factory = gmsh.model.geo\n factory.addPoint(-e1-e2, 0 , 0, Lc1, 1)\n factory.addPoint(-e1-e2, h1 , 0, Lc1, 2)\n factory.addPoint(-e3-r , h1 , 0, Lc2, 3)\n factory.addPoint(-e3-r , h1+r , 0, Lc2, 4)\n factory.addPoint(-e3 , h1+r , 0, Lc2, 5)\n factory.addPoint(-e3 , h1+h2, 0, Lc1, 6)\n factory.addPoint( e3 , h1+h2, 0, Lc1, 7)\n factory.addPoint( e3 , h1+r , 0, Lc2, 8)\n factory.addPoint( e3+r , h1+r , 0, Lc2, 9)\n factory.addPoint( e3+r , h1 , 0, Lc2, 10)\n factory.addPoint( e1+e2, h1 , 0, Lc1, 11)\n factory.addPoint( e1+e2, 0 , 0, Lc1, 12)\n factory.addPoint( e2 , 0 , 0, Lc1, 13)\n\n factory.addPoint( R1 / ssin, h5+R1*ccos, 0, Lc2, 14)\n factory.addPoint( 0 , h5 , 0, Lc2, 15)\n factory.addPoint(-R1 / ssin, h5+R1*ccos, 0, Lc2, 16)\n factory.addPoint(-e2 , 0.0 , 0, Lc1, 17)\n\n factory.addPoint(-R2 , h1+h3 , 0, Lc2, 18)\n factory.addPoint(-R2 , h1+h3+h4, 0, Lc2, 19)\n factory.addPoint( 0 , h1+h3+h4, 0, Lc2, 20)\n factory.addPoint( R2 , h1+h3+h4, 0, Lc2, 21)\n factory.addPoint( R2 , h1+h3 , 0, Lc2, 22)\n factory.addPoint( 0 , h1+h3 , 0, Lc2, 23)\n\n factory.addPoint( 0, h1+h3+h4+R2, 0, Lc2, 24)\n factory.addPoint( 0, h1+h3-R2, 0, Lc2, 25)\n\n factory.addLine(1 , 17, 1)\n factory.addLine(17, 16, 2)\n\n factory.addCircleArc(14,15,16, 3)\n factory.addLine(14,13, 4)\n factory.addLine(13,12, 5)\n factory.addLine(12,11, 6)\n factory.addLine(11,10, 7)\n factory.addCircleArc(8,9,10, 8)\n factory.addLine(8,7, 9)\n factory.addLine(7,6, 10)\n factory.addLine(6,5, 11)\n factory.addCircleArc(3,4,5, 12)\n factory.addLine(3,2, 13)\n factory.addLine(2,1, 14)\n factory.addLine(18,19, 15)\n factory.addCircleArc(21,20,24, 16)\n factory.addCircleArc(24,20,19, 17)\n factory.addCircleArc(18,23,25, 18)\n factory.addCircleArc(25,23,22, 19)\n factory.addLine(21,22, 20)\n\n factory.addCurveLoop([17,-15,18,19,-20,16], 21)\n factory.addPlaneSurface([21], 22)\n factory.addCurveLoop([11,-12,13,14,1,2,-3,4,5,6,7,-8,9,10], 23)\n\n factory.addPlaneSurface([23,21], 24)\n\n factory.synchronize()\n\n v = gmsh.view.add(\"comments\")\n\n gmsh.view.addListDataString(v, [10, -10], [\"Created with Gmsh\"])\n\n gmsh.view.addListDataString(v, [0, 0.11, 0], [\"Hole\"],\n [\"Align\", \"Center\", \"Font\", \"Helvetica\"])\n\n gmsh.view.addListDataString(v, [0, 0.09, 0], [\"file://../t4_image.png@0.01x0\"],\n [\"Align\", \"Center\"])\n\n gmsh.view.addListDataString(v, [-0.01, 0.09, 0],\n [\"file://../t4_image.png@0.01x0,0,0,1,0,1,0\"])\n\n gmsh.view.addListDataString(v, [0, 0.12, 0],\n [\"file://../t4_image.png@0.01x0#\"],\n [\"Align\", \"Center\"])\n\n gmsh.view.addListDataString(v, [150, -7], [\"file://../t4_image.png@20x0\"])\n\n gmsh.view.option.setString(v, \"DoubleClickedCommand\",\n \"Printf('View[0] has been double-clicked!');\")\n gmsh.option.setString(\n \"Geometry.DoubleClickedLineCommand\",\n \"Printf('Curve %g has been double-clicked!', Geometry.DoubleClickedEntityTag);\")\n\n gmsh.model.setColor([(2, 22)], 127, 127, 127)\n gmsh.model.setColor([(2, 24)], 160, 32, 240)\n gmsh.model.setColor([(1, i) for i in 1:14], 255, 0, 0)\n gmsh.model.setColor([(1, i) for i in 15:20], 255, 255, 0)\n\n gmsh.model.mesh.generate(2)\n grid = ExtendableGrids.simplexgrid_from_gmsh(gmsh.model)\n gmsh.finalize()\n grid\nend","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"(Image: )","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"Example t5 from the GMSH docs","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"function gmsh_t5()\n\n gmsh.initialize()\n\n gmsh.model.add(\"t5\")\n\n lcar1 = .1\n lcar2 = .0005\n lcar3 = .055\n\n gmsh.model.geo.addPoint(0.5,0.5,0.5, lcar2, 1)\n gmsh.model.geo.addPoint(0.5,0.5,0, lcar1, 2)\n gmsh.model.geo.addPoint(0,0.5,0.5, lcar1, 3)\n gmsh.model.geo.addPoint(0,0,0.5, lcar1, 4)\n gmsh.model.geo.addPoint(0.5,0,0.5, lcar1, 5)\n gmsh.model.geo.addPoint(0.5,0,0, lcar1, 6)\n gmsh.model.geo.addPoint(0,0.5,0, lcar1, 7)\n gmsh.model.geo.addPoint(0,1,0, lcar1, 8)\n gmsh.model.geo.addPoint(1,1,0, lcar1, 9)\n gmsh.model.geo.addPoint(0,0,1, lcar1, 10)\n gmsh.model.geo.addPoint(0,1,1, lcar1, 11)\n gmsh.model.geo.addPoint(1,1,1, lcar1, 12)\n gmsh.model.geo.addPoint(1,0,1, lcar1, 13)\n gmsh.model.geo.addPoint(1,0,0, lcar1, 14)\n\n gmsh.model.geo.addLine(8,9, 1); gmsh.model.geo.addLine(9,12, 2)\n gmsh.model.geo.addLine(12,11, 3); gmsh.model.geo.addLine(11,8, 4)\n gmsh.model.geo.addLine(9,14, 5); gmsh.model.geo.addLine(14,13, 6)\n gmsh.model.geo.addLine(13,12, 7); gmsh.model.geo.addLine(11,10, 8)\n gmsh.model.geo.addLine(10,13, 9); gmsh.model.geo.addLine(10,4, 10)\n gmsh.model.geo.addLine(4,5, 11); gmsh.model.geo.addLine(5,6, 12)\n gmsh.model.geo.addLine(6,2, 13); gmsh.model.geo.addLine(2,1, 14)\n gmsh.model.geo.addLine(1,3, 15); gmsh.model.geo.addLine(3,7, 16)\n gmsh.model.geo.addLine(7,2, 17); gmsh.model.geo.addLine(3,4, 18)\n gmsh.model.geo.addLine(5,1, 19); gmsh.model.geo.addLine(7,8, 20)\n gmsh.model.geo.addLine(6,14, 21);\n\n gmsh.model.geo.addCurveLoop([-11,-19,-15,-18], 22)\n gmsh.model.geo.addPlaneSurface([22], 23)\n gmsh.model.geo.addCurveLoop([16,17,14,15], 24)\n gmsh.model.geo.addPlaneSurface([24], 25)\n gmsh.model.geo.addCurveLoop([-17,20,1,5,-21,13], 26)\n gmsh.model.geo.addPlaneSurface([26], 27)\n gmsh.model.geo.addCurveLoop([-4,-1,-2,-3], 28)\n gmsh.model.geo.addPlaneSurface([28], 29)\n gmsh.model.geo.addCurveLoop([-7,2,-5,-6], 30)\n gmsh.model.geo.addPlaneSurface([30], 31)\n gmsh.model.geo.addCurveLoop([6,-9,10,11,12,21], 32)\n gmsh.model.geo.addPlaneSurface([32], 33)\n gmsh.model.geo.addCurveLoop([7,3,8,9], 34)\n gmsh.model.geo.addPlaneSurface([34], 35)\n gmsh.model.geo.addCurveLoop([-10,18,-16,-20,4,-8], 36)\n gmsh.model.geo.addPlaneSurface([36], 37)\n gmsh.model.geo.addCurveLoop([-14,-13,-12,19], 38)\n gmsh.model.geo.addPlaneSurface([38], 39)\n\n shells = []\n\n sl = gmsh.model.geo.addSurfaceLoop([35,31,29,37,33,23,39,25,27])\n push!(shells, sl)\n\n function cheeseHole(x, y, z, r, lc, shells)\n p1 = gmsh.model.geo.addPoint(x, y, z, lc)\n p2 = gmsh.model.geo.addPoint(x+r,y, z, lc)\n p3 = gmsh.model.geo.addPoint(x, y+r,z, lc)\n p4 = gmsh.model.geo.addPoint(x, y, z+r, lc)\n p5 = gmsh.model.geo.addPoint(x-r,y, z, lc)\n p6 = gmsh.model.geo.addPoint(x, y-r,z, lc)\n p7 = gmsh.model.geo.addPoint(x, y, z-r, lc)\n\n c1 = gmsh.model.geo.addCircleArc(p2,p1,p7)\n c2 = gmsh.model.geo.addCircleArc(p7,p1,p5)\n c3 = gmsh.model.geo.addCircleArc(p5,p1,p4)\n c4 = gmsh.model.geo.addCircleArc(p4,p1,p2)\n c5 = gmsh.model.geo.addCircleArc(p2,p1,p3)\n c6 = gmsh.model.geo.addCircleArc(p3,p1,p5)\n c7 = gmsh.model.geo.addCircleArc(p5,p1,p6)\n c8 = gmsh.model.geo.addCircleArc(p6,p1,p2)\n c9 = gmsh.model.geo.addCircleArc(p7,p1,p3)\n c10 = gmsh.model.geo.addCircleArc(p3,p1,p4)\n c11 = gmsh.model.geo.addCircleArc(p4,p1,p6)\n c12 = gmsh.model.geo.addCircleArc(p6,p1,p7)\n\n l1 = gmsh.model.geo.addCurveLoop([c5,c10,c4])\n l2 = gmsh.model.geo.addCurveLoop([c9,-c5,c1])\n l3 = gmsh.model.geo.addCurveLoop([c12,-c8,-c1])\n l4 = gmsh.model.geo.addCurveLoop([c8,-c4,c11])\n l5 = gmsh.model.geo.addCurveLoop([-c10,c6,c3])\n l6 = gmsh.model.geo.addCurveLoop([-c11,-c3,c7])\n l7 = gmsh.model.geo.addCurveLoop([-c2,-c7,-c12])\n l8 = gmsh.model.geo.addCurveLoop([-c6,-c9,c2])\n\n s1 = gmsh.model.geo.addSurfaceFilling([l1])\n s2 = gmsh.model.geo.addSurfaceFilling([l2])\n s3 = gmsh.model.geo.addSurfaceFilling([l3])\n s4 = gmsh.model.geo.addSurfaceFilling([l4])\n s5 = gmsh.model.geo.addSurfaceFilling([l5])\n s6 = gmsh.model.geo.addSurfaceFilling([l6])\n s7 = gmsh.model.geo.addSurfaceFilling([l7])\n s8 = gmsh.model.geo.addSurfaceFilling([l8])\n\n sl = gmsh.model.geo.addSurfaceLoop([s1, s2, s3, s4, s5, s6, s7, s8])\n v = gmsh.model.geo.addVolume([sl])\n push!(shells, sl)\n return v\n end\n\n x = 0\n y = 0.75; z = 0; r = 0.09\n for t in 1:5\n x += 0.166\n z += 0.166\n v = cheeseHole(x, y, z, r, lcar3, shells)\n gmsh.model.geo.addPhysicalGroup(3, [v], t)\n end\n\n gmsh.model.geo.addVolume(shells, 186);\n\n gmsh.model.geo.synchronize()\n\n gmsh.model.addPhysicalGroup(3, [186], 10);\n\n gmsh.model.mesh.generate(3)\n grid = ExtendableGrids.simplexgrid_from_gmsh(gmsh.model)\n gmsh.finalize()\n grid\nend","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"(Image: )","category":"page"},{"location":"script_examples/gmsh/#CI-callbacks-for-[ExampleJuggler.jl](https://github.com/j-fu/ExampleJuggler.jl)","page":"gmsh","title":"CI callbacks for ExampleJuggler.jl","text":"","category":"section"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"Unit tests","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"using Test\nfunction runtests()\n ok(grid)= num_nodes(grid) > 0 && num_cells(grid) > 0 && num_bfaces(grid) > 0\n @test ok(gmsh_t1())\n @test ok(gmsh_t4())\n @test ok(gmsh_t5())\nend","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"Plot generation","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"using GridVisualize\nfunction generateplots(picdir; Plotter = nothing)\n if isdefined(Plotter, :Makie)\n size = (500, 500)\n Plotter.save(joinpath(picdir, \"gmsh_t1.svg\"), gridplot(gmsh_t1(); Plotter, size))\n Plotter.save(joinpath(picdir, \"gmsh_t4.svg\"), gridplot(gmsh_t4(); Plotter, size))\n Plotter.save(joinpath(picdir, \"gmsh_t5.svg\"), gridplot(gmsh_t5(); Plotter, size))\n end\nend","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"","category":"page"},{"location":"script_examples/gmsh/","page":"gmsh","title":"gmsh","text":"This page was generated using Literate.jl.","category":"page"},{"location":"arraytools/#Array-tools","page":"Array tools","title":"Array tools","text":"","category":"section"},{"location":"arraytools/#API","page":"Array tools","title":"API","text":"","category":"section"},{"location":"arraytools/","page":"Array tools","title":"Array tools","text":"Modules = [ExtendableGrids]\nPages = [\"arraytools.jl\"]","category":"page"},{"location":"arraytools/#ExtendableGrids.geomspace-NTuple{4, Any}","page":"Array tools","title":"ExtendableGrids.geomspace","text":"geomspace(a, b, ha, hb; tol, maxiterations) -> Any\n\n\n(Try to) create a subdivision of interval (a,b) stored in the returned array X such that \n\nX[1]==a, X[end]==b\n(X[2]-X[1])<=ha+tol*(b-a)\n(X[end]-X[end-1])<=hb+tol*(b-a)\nThere is a number q such that X[i+1]-X[i] == q*(X[i]-X[i-1])\nX is the array with the minimal possible number of points with the above property\n\nCaveat: the algorithm behind this is tested for many cases but unproven.\n\nReturns an Array containing the points of the subdivision.\n\n\n\n\n\n","category":"method"},{"location":"arraytools/#ExtendableGrids.glue-Tuple{AbstractVector, AbstractVector}","page":"Array tools","title":"ExtendableGrids.glue","text":"c=glue(a,b)\n\nGlue together two vectors a and b resulting in a vector c. They last element of a shall be equal (up to tol) to the first element of b. The result fulfills length(c)=length(a)+length(b)-1\n\n\n\n\n\n","category":"method"},{"location":"arraytools/#ExtendableGrids.linspace-Tuple{Any, Any, Any}","page":"Array tools","title":"ExtendableGrids.linspace","text":"linspace(a, b, n) -> Any\n\n\nResurrect linspace despite https://github.com/JuliaLang/julia/pull/25896#issuecomment-363769368\n\n\n\n\n\n","category":"method"},{"location":"regionedit/#Region-editing","page":"Region editing","title":"Region editing","text":"","category":"section"},{"location":"regionedit/","page":"Region editing","title":"Region editing","text":"Tools for editing grid region numbers","category":"page"},{"location":"regionedit/","page":"Region editing","title":"Region editing","text":"cellmask!\nbfacemask!\nrect!\nbedgemask!","category":"page"},{"location":"regionedit/#ExtendableGrids.cellmask!","page":"Region editing","title":"ExtendableGrids.cellmask!","text":"cellmask!(\n grid::ExtendableGrid,\n maskmin,\n maskmax,\n ireg::Int64;\n tol\n) -> ExtendableGrid\n\n\nEdit region numbers of grid cells via rectangular mask.\n\nExamples: Rectangle-with-multiple-regions\n\n\n\n\n\n","category":"function"},{"location":"regionedit/#ExtendableGrids.bfacemask!","page":"Region editing","title":"ExtendableGrids.bfacemask!","text":"bfacemask!(grid::ExtendableGrid,\n maskmin,\n maskmax,\n ireg;\n allow_new=true,\n tol=1.0e-10)\n\nEdit region numbers of grid boundary facets via rectangular mask. If allow_new is true (default), new facets are added.\n\nireg may be an integer or a function ireg(current_region).\n\nA zero region number removes boundary faces.\n\nExamples: Rectangle-with-multiple-regions\n\n\n\n\n\n","category":"function"},{"location":"regionedit/#ExtendableGrids.rect!","page":"Region editing","title":"ExtendableGrids.rect!","text":"rect!(grid,maskmin,maskmax; \n region=1, \n bregion=1, \n bregions=nothing, \n tol=1.0e-10)\n\nPlace a rectangle into a rectangular grid. It places a cellmask according to maskmin and maskmax, and introduces boundary faces via `bfacesmask! at all sides of the mask area. It is checked that the coordinate values in the mask match (with tolerance) corresponding directional coordinates of the grid.\n\nIf bregions is given it is assumed to be a vector corresponding to the number of sides, im the sequence w,e in 1D. s,e,n,w in 2D and s,e,n,w,b,t in 3D.\n\nbregion or elements of bregions can be numbers or functions ireg(current_region).\n\nExamples: Subgrid-from-rectangle, Rect2d-with-bregion-function, Cross3d\n\n\n\n\n\n","category":"function"},{"location":"regionedit/#ExtendableGrids.bedgemask!","page":"Region editing","title":"ExtendableGrids.bedgemask!","text":"bedgemask!(\n grid::ExtendableGrid,\n xa,\n xb,\n ireg::Int64;\n tol\n) -> ExtendableGrid\n\n\nEdit region numbers of grid boundary edges via line mask. This only works for 3D grids.\n\n\n\n\n\n","category":"function"},{"location":"cellfinder/#Search-and-Interpolation","page":"Search and Interpolation","title":"Search and Interpolation","text":"","category":"section"},{"location":"cellfinder/#Search","page":"Search and Interpolation","title":"Search","text":"","category":"section"},{"location":"cellfinder/","page":"Search and Interpolation","title":"Search and Interpolation","text":"CellFinder\ngFindLocal!\ngFindBruteForce!","category":"page"},{"location":"cellfinder/#ExtendableGrids.CellFinder","page":"Search and Interpolation","title":"ExtendableGrids.CellFinder","text":"struct CellFinder{Tv, Ti}\n\nCellFinder supports finding cells in grids.\n\n\n\n\n\n","category":"type"},{"location":"cellfinder/#ExtendableGrids.gFindLocal!","page":"Search and Interpolation","title":"ExtendableGrids.gFindLocal!","text":"icellfound=GFindLocal!(xref,cellfinder,p; icellstart=1,eps=1.0e-14, trybrute=true)\n\nFind cell containing point p starting with cell number icellstart.\n\nReturns cell number if found, zero otherwise. If trybrute==true try gFindBruteForce! before giving up. Upon return, xref contains the barycentric coordinates of the point in the sequence dim+1, 1...dim\n\nwarning: Warning\nCurrently implemented for simplex grids only.\n\n\n\n\n\n","category":"function"},{"location":"cellfinder/#ExtendableGrids.gFindBruteForce!","page":"Search and Interpolation","title":"ExtendableGrids.gFindBruteForce!","text":"icellfound=gFindBruteForce!(xref,cellfinder,p; icellstart=1,eps=1.0e-14)\n\nFind cell containing point p starting with cell number icellstart.\n\nReturns cell number if found, zero otherwise. Upon return, xref contains the barycentric coordinates of the point in the sequence dim+1, 1...dim\n\nwarning: Warning\nCurrently implemented for simplex grids only.\n\n\n\n\n\n","category":"function"},{"location":"cellfinder/#Interpolation","page":"Search and Interpolation","title":"Interpolation","text":"","category":"section"},{"location":"cellfinder/","page":"Search and Interpolation","title":"Search and Interpolation","text":"interpolate\ninterpolate!","category":"page"},{"location":"cellfinder/#ExtendableGrids.interpolate","page":"Search and Interpolation","title":"ExtendableGrids.interpolate","text":"u_to=interpolate(grid_to, u_from, grid_from;eps=1.0e-14,trybrute=true)\n\nPiecewise linear interpolation of function u_from on grid grid_from to grid_to. Works for matrices with second dimension corresponding to grid nodes and for vectors.\n\nwarning: Warning\nMay be slow on non-convex domains. If trybrute==false it may even fail.\n\nwarning: Warning\nCurrently implemented for simplex grids only.\n\n\n\n\n\n","category":"function"},{"location":"cellfinder/#ExtendableGrids.interpolate!","page":"Search and Interpolation","title":"ExtendableGrids.interpolate!","text":"interpolate!(u_to,grid_to, u_from, grid_from;eps=1.0e-14,trybrute=true)\n\nMutating form of interpolate\n\n\n\n\n\n","category":"function"},{"location":"gmsh/#Gmsh-interoperability","page":"Gmsh interoperability","title":"Gmsh interoperability","text":"","category":"section"},{"location":"gmsh/","page":"Gmsh interoperability","title":"Gmsh interoperability","text":"This functionality is in beta stage. Breaking changes for this API are considered non-breaking for the package. Therefore, these functions are not exported yet.","category":"page"},{"location":"gmsh/#API","page":"Gmsh interoperability","title":"API","text":"","category":"section"},{"location":"gmsh/","page":"Gmsh interoperability","title":"Gmsh interoperability","text":"These methods become available via a package extension which is loaded together with Gmsh.jl. See the general gmsh documentation, the Gmsh reference manual and the Gmsh Julia API source code for information.","category":"page"},{"location":"gmsh/","page":"Gmsh interoperability","title":"Gmsh interoperability","text":"ExtendableGrids.simplexgrid_from_gmsh\nExtendableGrids.simplexgrid_to_gmsh\nExtendableGrids.mixedgrid_from_gmsh\nExtendableGrids.mixedgrid_to_gmsh","category":"page"},{"location":"gmsh/#ExtendableGrids.simplexgrid_from_gmsh","page":"Gmsh interoperability","title":"ExtendableGrids.simplexgrid_from_gmsh","text":"simplexgrid_from_gmsh(filename::String; incomplete=false, Tc=Float32, Ti=Int32)\n\nThe msh file is read and a SimplexGrid is created. The mesh can also contain an incomplete grid. For this, the function has to be called with incomplete=true. 'incomplete' means that the grid only consists of nodes and cells, it does not have a boundary. We also do not try to read the physical groups for those grids. Tc is the type of coordinates, Ti is the index type.\n\n\n\n\n\nsimplexgrid_from_gmsh(mod::Module; incomplete=false, Tc=Float32, Ti=Int32)\n\nThe mesh contained in the gmsh module is converted to a SimplexGrid. The mesh can also contain an incomplete grid. For this, the function has to be called with incomplete=true. 'incomplete' means that the grid only consists of nodes and cells, it does not have a boundary. We also do not try to read the physical groups for those grids. Tc is the type of coordinates, Ti is the index type.\n\n\n\n\n\n","category":"function"},{"location":"gmsh/#ExtendableGrids.simplexgrid_to_gmsh","page":"Gmsh interoperability","title":"ExtendableGrids.simplexgrid_to_gmsh","text":"simplexgrid_to_gmsh(g::ExtendableGrid; filename::String=\"\")\n\nThe SimplexGrid 'g' is loaded into a gmsh module. If a string (not \"\") is passed via 'filename', the mesh is written into this file.\n\n\n\n\n\n","category":"function"},{"location":"gmsh/#ExtendableGrids.mixedgrid_from_gmsh","page":"Gmsh interoperability","title":"ExtendableGrids.mixedgrid_from_gmsh","text":"mixedgrid_from_gmsh(filename::String; Tc=Float32, Ti=Int32)\n\nThe msh file is read and an ExtendableGrid is created. This only works for dim=2 grids and the orientation may be wrong. Tc is the type of coordinates, Ti is the index type.\n\n\n\n\n\nmixedgrid_from_gmsh(mod::Module; Tc=Float32, Ti=Int32)\n\nThe mesh contained in the gmsh module is converted to an ExtendableGrid. Tc is the type of coordinates, Ti is the index type.\n\n\n\n\n\n","category":"function"},{"location":"gmsh/#ExtendableGrids.mixedgrid_to_gmsh","page":"Gmsh interoperability","title":"ExtendableGrids.mixedgrid_to_gmsh","text":"mixedgrid_to_gmsh(g::ExtendableGrid; filename::String=\"\")\n\nThe ExtendableGrid 'g' is loaded into a gmsh module. If a string (not \"\") is passed via 'filename', the mesh is written into this file.\n\n\n\n\n\n","category":"function"},{"location":"subgrid/#Subgrid","page":"Subgrid","title":"Subgrid","text":"","category":"section"},{"location":"subgrid/","page":"Subgrid","title":"Subgrid","text":"Subgrids of an ExtendableGrid are again of the same type ExtendableGrid and unse the typed Dict mechanism to store linkage to the parent grid.","category":"page"},{"location":"subgrid/","page":"Subgrid","title":"Subgrid","text":"using ExtendableGrids # hide\ngrid=simplexgrid([1,2,3], [4,5,6])\nsub=subgrid(grid,[2],boundary=true, transform=(a,b) -> (a[1]=10*b[2]))\nprintln(keys(sub))\nprintln(sub[Coordinates])","category":"page"},{"location":"subgrid/","page":"Subgrid","title":"Subgrid","text":"Given a vector on the parent grid, one can create a view of this vecotor on the subgrid:","category":"page"},{"location":"subgrid/","page":"Subgrid","title":"Subgrid","text":"using ExtendableGrids # hide\ngrid=simplexgrid([1,2,3], [4,5,6])\nsub=subgrid(grid,[2],boundary=true, transform=(a,b) -> (a[1]=10*b[2]))\nv=[i for i=1:num_nodes(grid)]\nsubv=view(v,sub)\nprintln(subv)","category":"page"},{"location":"subgrid/#API","page":"Subgrid","title":"API","text":"","category":"section"},{"location":"subgrid/","page":"Subgrid","title":"Subgrid","text":"Modules = [ExtendableGrids]\nPages = [\"subgrid.jl\"]","category":"page"},{"location":"subgrid/#ExtendableGrids.NodeInParent","page":"Subgrid","title":"ExtendableGrids.NodeInParent","text":"abstract type NodeInParent <: AbstractGridIntegerArray1D\n\nGrid component key type for storing node in parent array\n\n\n\n\n\n","category":"type"},{"location":"subgrid/#ExtendableGrids.ParentGrid","page":"Subgrid","title":"ExtendableGrids.ParentGrid","text":"abstract type ParentGrid <: AbstractGridComponent\n\nGrid component key type for storing parent grid\n\n\n\n\n\n","category":"type"},{"location":"subgrid/#ExtendableGrids.SubgridVectorView","page":"Subgrid","title":"ExtendableGrids.SubgridVectorView","text":"struct SubgridVectorView{Tv, Ti} <: AbstractArray{Tv, 1}\n\nVector view on subgrid\n\nsysarray::AbstractVector\nnode_in_parent::Vector\n\n\n\n\n\n","category":"type"},{"location":"subgrid/#Base.getindex-Tuple{ExtendableGrids.SubgridVectorView, Integer}","page":"Subgrid","title":"Base.getindex","text":"getindex(\n aview::ExtendableGrids.SubgridVectorView,\n inode::Integer\n) -> Any\n\n\nAccessor method for subgrid vector view.\n\n\n\n\n\n","category":"method"},{"location":"subgrid/#Base.setindex!-Tuple{ExtendableGrids.SubgridVectorView, Any, Integer}","page":"Subgrid","title":"Base.setindex!","text":"setindex!(\n aview::ExtendableGrids.SubgridVectorView,\n v,\n inode::Integer\n) -> ExtendableGrids.SubgridVectorView\n\n\nAccessor method for subgrid vector view.\n\n\n\n\n\n","category":"method"},{"location":"subgrid/#Base.size-Tuple{ExtendableGrids.SubgridVectorView}","page":"Subgrid","title":"Base.size","text":"size(a::ExtendableGrids.SubgridVectorView) -> Tuple{Int64}\n\n\nReturn size of vector view.\n\n\n\n\n\n","category":"method"},{"location":"subgrid/#Base.view-Tuple{AbstractVector, ExtendableGrid}","page":"Subgrid","title":"Base.view","text":"view(\n a::AbstractVector,\n subgrid::ExtendableGrid\n) -> ExtendableGrids.SubgridVectorView\n\n\nCreate a view of the vector on a subgrid.\n\n\n\n\n\n","category":"method"},{"location":"subgrid/#ExtendableGrids._copytransform!-Tuple{AbstractArray, AbstractArray}","page":"Subgrid","title":"ExtendableGrids._copytransform!","text":"_copytransform!(a::AbstractArray, b::AbstractArray)\n\n\nDefault transform for subgrid creation\n\n\n\n\n\n","category":"method"},{"location":"subgrid/#ExtendableGrids.subgrid-Tuple{Any, AbstractArray}","page":"Subgrid","title":"ExtendableGrids.subgrid","text":"subgrid(\n parent,\n subregions::AbstractArray;\n transform,\n boundary,\n project\n) -> ExtendableGrid\n\n\nCreate subgrid from list of regions.\n\nparent: parent grid \nsubregions: Array of subregions\ntransform (kw parameter): transformation function between grid and subgrid coordinates acting on one point. Default: copytransform\nboundary: if true, create codimension 1 subgrid from boundary region.\nproject: project coordinates onto subgrid dimension\n\nA subgrid is of type ExtendableGrid and stores two additional components: ParentGrid and NodeInParent\n\n\n\n\n\n","category":"method"},{"location":"more/#Derived-adjacencies","page":"Derived adjacencies","title":"Derived adjacencies","text":"","category":"section"},{"location":"more/#API","page":"Derived adjacencies","title":"API","text":"","category":"section"},{"location":"more/","page":"Derived adjacencies","title":"Derived adjacencies","text":"Modules = [ExtendableGrids]\nPages = [\"derived.jl\",\"more.jl\"]","category":"page"},{"location":"more/#ExtendableGrids.BFaceCells","page":"Derived adjacencies","title":"ExtendableGrids.BFaceCells","text":"abstract type BFaceCells <: AbstractGridAdjacency\n\nAdjacency describing cells per boundary or interior face\n\n\n\n\n\n","category":"type"},{"location":"more/#ExtendableGrids.BFaceEdges","page":"Derived adjacencies","title":"ExtendableGrids.BFaceEdges","text":"abstract type BFaceEdges <: AbstractGridAdjacency\n\nAdjacency describing edges per boundary or interior face\n\n\n\n\n\n","category":"type"},{"location":"more/#ExtendableGrids.BFaceNormals","page":"Derived adjacencies","title":"ExtendableGrids.BFaceNormals","text":"abstract type BFaceNormals <: AbstractGridComponent\n\nAdjacency describing outer normals to boundary faces\n\n\n\n\n\n","category":"type"},{"location":"more/#ExtendableGrids.prepare_edges!-Tuple{ExtendableGrid}","page":"Derived adjacencies","title":"ExtendableGrids.prepare_edges!","text":"prepare_edges!(grid)\n\n\nPrepare edge adjacencies (celledges, edgecells, edgenodes)\n\nCurrently depends on ExtendableSparse, we may want to remove this adjacency.\n\n\n\n\n\n","category":"method"},{"location":"","page":"Home","title":"Home","text":"using Markdown\nMarkdown.parse(\"\"\"\n$(read(\"../../README.md\",String))\n\"\"\")","category":"page"},{"location":"coordinatesystem/#Coordinate-systems","page":"Coordinate systems","title":"Coordinate systems","text":"","category":"section"},{"location":"coordinatesystem/","page":"Coordinate systems","title":"Coordinate systems","text":"Coordinate systems are described via abstract types. The list of coordinate systems can be obtained with the coordinatesystems method:","category":"page"},{"location":"coordinatesystem/","page":"Coordinate systems","title":"Coordinate systems","text":"using ExtendableGrids # hide\ncoordinatesystems() #hide","category":"page"},{"location":"coordinatesystem/#API","page":"Coordinate systems","title":"API","text":"","category":"section"},{"location":"coordinatesystem/","page":"Coordinate systems","title":"Coordinate systems","text":"Modules = [ExtendableGrids]\nPages = [\"coordinatesystem.jl\"]","category":"page"},{"location":"coordinatesystem/#ExtendableGrids.AbstractCoordinateSystem","page":"Coordinate systems","title":"ExtendableGrids.AbstractCoordinateSystem","text":"abstract type AbstractCoordinateSystem <: AbstractExtendableGridApexType\n\nApex type for coordinate systems\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.Cartesian1D","page":"Coordinate systems","title":"ExtendableGrids.Cartesian1D","text":"abstract type Cartesian1D <: AbstractCoordinateSystem\n\n1D cartesion coordinate system (unknown x)\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.Cartesian2D","page":"Coordinate systems","title":"ExtendableGrids.Cartesian2D","text":"abstract type Cartesian2D <: AbstractCoordinateSystem\n\n2D cartesion coordinate system (unknowns x,y)\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.Cartesian3D","page":"Coordinate systems","title":"ExtendableGrids.Cartesian3D","text":"abstract type Cartesian3D <: AbstractCoordinateSystem\n\n2D cartesion coordinate system (unknowns x,y,z)\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.Cylindrical2D","page":"Coordinate systems","title":"ExtendableGrids.Cylindrical2D","text":"abstract type Cylindrical2D <: AbstractCoordinateSystem\n\n2D cylindrical coordinate system (unknowns r,z)\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.Cylindrical3D","page":"Coordinate systems","title":"ExtendableGrids.Cylindrical3D","text":"abstract type Cylindrical3D <: AbstractCoordinateSystem\n\n3D cylindrical coordinate system (unknowns r,ϕ,z)\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.Polar1D","page":"Coordinate systems","title":"ExtendableGrids.Polar1D","text":"abstract type Polar1D <: AbstractCoordinateSystem\n\n1D polar coordinate system (unknown r)\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.Polar2D","page":"Coordinate systems","title":"ExtendableGrids.Polar2D","text":"abstract type Polar2D <: AbstractCoordinateSystem\n\n2D polar coordinate system (unknowns r,ϕ)\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.Spherical1D","page":"Coordinate systems","title":"ExtendableGrids.Spherical1D","text":"abstract type Spherical1D <: AbstractCoordinateSystem\n\n1D spheriacal coordinate system (unknown r)\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.Spherical3D","page":"Coordinate systems","title":"ExtendableGrids.Spherical3D","text":"abstract type Spherical3D <: AbstractCoordinateSystem\n\n3D spheriacal coordinate system (unknowns r,ϕ,θ)\n\n\n\n\n\n","category":"type"},{"location":"coordinatesystem/#ExtendableGrids.coordinatesystems-Tuple{}","page":"Coordinate systems","title":"ExtendableGrids.coordinatesystems","text":"coordinatesystems()\n\n\nList possible coordinate systems. These describe the meaning of the grid coordinates.\n\n\n\n\n\n","category":"method"}] +} diff --git a/v1.2.2/shape_specs/index.html b/v1.2.2/shape_specs/index.html new file mode 100644 index 00000000..7b3e8f81 --- /dev/null +++ b/v1.2.2/shape_specs/index.html @@ -0,0 +1,43 @@ + +Shape specifications · ExtendableGrids.jl

    Shape specifications

    API

    diff --git a/v1.2.2/siteinfo.js b/v1.2.2/siteinfo.js new file mode 100644 index 00000000..df2e4157 --- /dev/null +++ b/v1.2.2/siteinfo.js @@ -0,0 +1 @@ +var DOCUMENTER_CURRENT_VERSION = "v1.2.2"; diff --git a/v1.2.2/subgrid/index.html b/v1.2.2/subgrid/index.html new file mode 100644 index 00000000..cd3f8aff --- /dev/null +++ b/v1.2.2/subgrid/index.html @@ -0,0 +1,32 @@ + +Subgrid · ExtendableGrids.jl

    Subgrid

    Subgrids of an ExtendableGrid are again of the same type ExtendableGrid and unse the typed Dict mechanism to store linkage to the parent grid.

    grid=simplexgrid([1,2,3], [4,5,6])
+sub=subgrid(grid,[2],boundary=true, transform=(a,b) -> (a[1]=10*b[2]))
+println(keys(sub))
+println(sub[Coordinates])
    Type{<:AbstractGridComponent}[BFaceNodes, BFaceRegions, CellGeometries, CoordinateSystem, ExtendableGrids.ParentGrid, Coordinates, CellRegions, CellNodes, ExtendableGrids.NodeInParent, BFaceGeometries, NumBFaceRegions]
+[40 50 60]

    Given a vector on the parent grid, one can create a view of this vecotor on the subgrid:

    grid=simplexgrid([1,2,3], [4,5,6])
+sub=subgrid(grid,[2],boundary=true, transform=(a,b) -> (a[1]=10*b[2]))
+v=[i for i=1:num_nodes(grid)]
+subv=view(v,sub)
+println(subv)
    [3, 6, 9]

    API

    Base.getindex — Method
    getindex(
+    aview::ExtendableGrids.SubgridVectorView,
+    inode::Integer
+) -> Any
+

    Accessor method for subgrid vector view.

    source
    Base.setindex! — Method
    setindex!(
+    aview::ExtendableGrids.SubgridVectorView,
+    v,
+    inode::Integer
+) -> ExtendableGrids.SubgridVectorView
+

    Accessor method for subgrid vector view.

    source
    Base.size — Method
    size(a::ExtendableGrids.SubgridVectorView) -> Tuple{Int64}
+

    Return size of vector view.

    source
    Base.view — Method
    view(
+    a::AbstractVector,
+    subgrid::ExtendableGrid
+) -> ExtendableGrids.SubgridVectorView
+

    Create a view of the vector on a subgrid.

    source
    ExtendableGrids.subgrid — Method
    subgrid(
+    parent,
+    subregions::AbstractArray;
+    transform,
+    boundary,
+    project
+) -> ExtendableGrid
+

    Create subgrid from list of regions.

    • parent: parent grid
    • subregions: Array of subregions
    • transform (kw parameter): transformation function between grid and subgrid coordinates acting on one point. Default: copytransform
    • boundary: if true, create codimension 1 subgrid from boundary region.
    • project: project coordinates onto subgrid dimension

    A subgrid is of type ExtendableGrid and stores two additional components: ParentGrid and NodeInParent

    source
    diff --git a/v1.2.2/tdict/index.html b/v1.2.2/tdict/index.html new file mode 100644 index 00000000..8e174357 --- /dev/null +++ b/v1.2.2/tdict/index.html @@ -0,0 +1,2 @@ + +The TDict interface pattern · ExtendableGrids.jl

    The TDict interface pattern

    Here we describe the idea behind the data structure used in this package. TDict means: extendable containers with type stable content access and lazy content creation via the Julia type system.

    Problem to be addressed

    In certain contexts it is desirable to use containers with core components which are user extendable and allow for type stable component acces. Moreover, some components are necessary on demand only, so they should be created lazily. Furthermore, there should be a kind of safety protocol which prevents errors from typos in component names etc.

    Julia default data structures do not provide these properties.

    struct

    • Julia structs with proper field type annotations guarantee type stability
    • Julia structs are not extendable, fields and their types are fixed upon definition
    • If we don't fix types of struct fields they become Any and a source for type instability
    • The situation could be fixed if getfield could be overloaded but it cant't

    Dict

    • Plain Dicts with flexible value types are a source of type instability
    • Dicts with strings as keys needs a meta protocol to handle semantics of keys which at the end probably hinges on string comparison which will make things slow
    • Dicts with symbols as keys still need this meta protocol
    • Same for the implementation of a lazy evaluation protocol
    • If a dict contains components of different types, component access will not be typestable

    Proposed solution:

    Harness the power of the Julia type system:

    • Use a struct containing a Dict with DataType as keys. Every key is a type.
    • Use type hierarchies to manage different value classes
    • Use the type system to dispatch between getindex/setindex! methods for keys
    • Extension requires declaring new types, keys can be only existing types almost removing typos as sources for errors
    • Lazy extension is managed bye an instantiate method called by getindex if necessary
    • Component access is made type stable by type dispatchedgetindex methods
    • Component insertion is made safe by having setindex! calling a veryform method

    Pros

    See above ...

    Cons

    • Implemented using a Dict, so access is inherently slower than access to a component of a struct. Therefore it is not well suited for inner loops.
    diff --git a/v1.2.2/tokenstream/index.html b/v1.2.2/tokenstream/index.html new file mode 100644 index 00000000..8d88ea70 --- /dev/null +++ b/v1.2.2/tokenstream/index.html @@ -0,0 +1,11 @@ + +Token streams · ExtendableGrids.jl

    Token streams

    The TokenStream struct supports reading of tokenizable ASCII files

    API

    ExtendableGrids.TokenStream — Type
    mutable struct TokenStream

    Tokenstream allows to read tokenized data from file without keeping the file ocntent in memory.

    • input::IOStream: Input stream
    • tokens::Vector{SubString{String}}: Array of current tokens kept in memory.
    • itoken::Int64: Position of actual token in tokens array
    • lineno::Int64: Line number in IOStream
    • comment::Char: Comment character
    • dlm::Function: Function telling if given character is a delimiter.
    source
    Base.eof — Method
    eof(tks::TokenStream) -> Bool
+

    Check if all tokens have been consumed.

    source
    ExtendableGrids.expecttoken — Method
    expecttoken(tks::TokenStream, expected::String) -> Bool
+

    Expect keyword token.

    If token is missing, an UnexpectedTokenError is thrown If the token has been found, reading will continue at the position after the token found.

    source
    ExtendableGrids.trytoken — Method
    trytoken(tks::TokenStream, expected::String) -> Bool
+

    Try for keyword token.

    It token is missing, the token read is put back into stream, a value of false is returned and the next try/gettoken command continues at the same position,

    Otherwise, true is returned, and reading continues after the token found.

    source
    diff --git a/v1.2.2/typehierarchy/index.html b/v1.2.2/typehierarchy/index.html new file mode 100644 index 00000000..68b53005 --- /dev/null +++ b/v1.2.2/typehierarchy/index.html @@ -0,0 +1,112 @@ + +Type hierarchy · ExtendableGrids.jl

    Type hierarchy

    The package defines a hierarchy of abstract types to handle grid compoments. The full tree is listed here:

    AbstractExtendableGridApexType
+├─ AbstractCoordinateSystem
+│  ├─ Cartesian1D
+│  ├─ Cartesian2D
+│  ├─ Cartesian3D
+│  ├─ Cylindrical2D
+│  ├─ Cylindrical3D
+│  ├─ Polar1D
+│  ├─ Polar2D
+│  ├─ Spherical1D
+│  └─ Spherical3D
+├─ AbstractElementGeometry
+│  ├─ AbstractElementGeometry0D
+│  │  └─ Vertex0D
+│  ├─ AbstractElementGeometry1D
+│  │  └─ Edge1D
+│  ├─ AbstractElementGeometry2D
+│  │  ├─ Circle2D
+│  │  └─ Polygon2D
+│  │     ├─ Hexagon2D
+│  │     ├─ Pentagon2D
+│  │     ├─ Quadrilateral2D
+│  │     │  └─ Parallelogram2D
+│  │     │     ⋮
+│  │     │
+│  │     └─ Triangle2D
+│  ├─ AbstractElementGeometry3D
+│  │  ├─ Polyhedron3D
+│  │  │  ├─ Hexahedron3D
+│  │  │  │  └─ Parallelepiped3D
+│  │  │  │     ⋮
+│  │  │  │
+│  │  │  ├─ Prism3D
+│  │  │  │  └─ TrianglePrism3D
+│  │  │  └─ Tetrahedron3D
+│  │  └─ Sphere3D
+│  └─ AbstractElementGeometry4D
+│     ├─ HyperCube4D
+│     └─ Polychoron4D
+└─ AbstractGridComponent
+   ├─ AbstractElementGeometries
+   │  ├─ BEdgeGeometries
+   │  ├─ BFaceGeometries
+   │  ├─ CellGeometries
+   │  ├─ EdgeGeometries
+   │  ├─ FaceGeometries
+   │  ├─ UniqueBEdgeGeometries
+   │  ├─ UniqueBFaceGeometries
+   │  ├─ UniqueCellGeometries
+   │  ├─ UniqueEdgeGeometries
+   │  └─ UniqueFaceGeometries
+   ├─ AbstractElementRegions
+   │  ├─ BEdgeRegions
+   │  ├─ BFaceRegions
+   │  ├─ CellRegions
+   │  ├─ EdgeRegions
+   │  └─ FaceRegions
+   ├─ AbstractGridAdjacency
+   │  ├─ BEdgeAssemblyGroups
+   │  ├─ BEdgeNodes
+   │  ├─ BFaceAssemblyGroups
+   │  ├─ BFaceCells
+   │  ├─ BFaceEdges
+   │  ├─ BFaceNodes
+   │  ├─ CellAssemblyGroups
+   │  ├─ CellEdgeSigns
+   │  ├─ CellEdges
+   │  ├─ CellFaceOrientations
+   │  ├─ CellFaceSigns
+   │  ├─ CellFaces
+   │  ├─ CellNodes
+   │  ├─ EdgeAssemblyGroups
+   │  ├─ EdgeCells
+   │  ├─ EdgeNodes
+   │  ├─ FaceAssemblyGroups
+   │  ├─ FaceCells
+   │  ├─ FaceEdgeSigns
+   │  ├─ FaceEdges
+   │  └─ FaceNodes
+   ├─ AbstractGridFloatArray1D
+   │  ├─ BEdgeVolumes
+   │  ├─ BFaceVolumes
+   │  ├─ CellVolumes
+   │  ├─ EdgeVolumes
+   │  ├─ FaceVolumes
+   │  ├─ XCoordinates
+   │  ├─ YCoordinates
+   │  └─ ZCoordinates
+   ├─ AbstractGridFloatArray2D
+   │  ├─ Coordinates
+   │  ├─ EdgeTangents
+   │  ├─ FaceNormals
+   │  └─ VoronoiFaceCenters
+   ├─ AbstractGridIntegerArray1D
+   │  ├─ BEdgeEdges
+   │  ├─ BFaceCellPos
+   │  ├─ BFaceFaces
+   │  ├─ CellParents
+   │  ├─ NodeInParent
+   │  └─ NodePatchGroups
+   ├─ AbstractGridIntegerArray2D
+   ├─ BFaceNormals
+   ├─ CoordinateSystem
+   ├─ AbstractGridFloatConstant
+   ├─ AbstractGridIntegerConstant
+   │  ├─ NumBEdgeRegions
+   │  ├─ NumBFaceRegions
+   │  └─ NumCellRegions
+   └─ ParentGrid

    API

    diff --git a/v1.2.2/vectorofconstants/index.html b/v1.2.2/vectorofconstants/index.html new file mode 100644 index 00000000..8433eaf3 --- /dev/null +++ b/v1.2.2/vectorofconstants/index.html @@ -0,0 +1,11 @@ + +Vector of constants · ExtendableGrids.jl

    Vector of constants

    Datatype to store vector with a constant value.

    API

    Base.iterate — Method
    iterate(
+    v::VectorOfConstants,
+    state
+) -> Union{Nothing, Tuple{Any, Any}}
+

    Iterator

    source
    Base.unique — Method
    unique(v::VectorOfConstants) -> Vector
+

    Shortcut for unique

    source
    diff --git a/v1.2.2/voronoi/index.html b/v1.2.2/voronoi/index.html new file mode 100644 index 00000000..04af6f4e --- /dev/null +++ b/v1.2.2/voronoi/index.html @@ -0,0 +1,3 @@ + +Voronoi tools · ExtendableGrids.jl
    diff --git a/versions.js b/versions.js index cfc63eba..7e1a9102 100644 --- a/versions.js +++ b/versions.js @@ -13,5 +13,5 @@ var DOC_VERSIONS = [ "v0.2", "dev", ]; -var DOCUMENTER_NEWEST = "v1.2.1"; +var DOCUMENTER_NEWEST = "v1.2.2"; var DOCUMENTER_STABLE = "stable";