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DESCRIPTION
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DESCRIPTION
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Package: Bioc2022nullranges
Title: Nullranges package demo for Bioconductor 2022
Version: 1.0.0
Authors@R:
c(person("Wancen", "Mu", role = c("aut"),
comment = c(ORCID = "0000-0002-5061-7581")),
person("Eric", "Davis", role = c("aut"),
comment = c(ORCID = "0000-0003-4051-3217")),
person("Mikhail", "Dozmorov", role = c("aut")),
person("Stuart", "Lee", role = c("aut"),
comment = c(ORCID = "0000-0003-1179-8436")),
person("Michael", "Love", role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0001-8401-0545")),
person("Douglas", "Phanstiel", role = c("aut"),
comment = c(ORCID = "0000-0003-2123-0051")))
Description: Modular package for generation of sets of ranges
representing the null hypothesis. These can take the form
of bootstrap samples of ranges (using the block bootstrap
framework of Bickel et al 2010), or sets of control ranges
that are matched across one or more covariates. nullranges
is designed to be inter-operable with other packages for
analysis of genomic overlap enrichment, including the
plyranges Bioconductor package.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.0
Depends:
Biobase
Suggests:
knitr,
rmarkdown,
pkgdown,
GenomicRanges,
nullranges,
nullrangesData,
tidyr,
purrr,
plyranges,
ggplot2,
patchwork
URL: https://ericsdavis.github.io/Bioc2022nullranges/
BugReports: https://ericsdavis.github.io/Bioc2022nullranges/issues/new/choose
VignetteBuilder: knitr
DockerImage: ghcr.io/ericsdavis/bioc2022nullranges:latest