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@Book{xie2015,
title = {Dynamic Documents with {R} and knitr},
author = {Yihui Xie},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2015},
edition = {2nd},
note = {ISBN 978-1498716963},
url = {https://yihui.org/knitr/},
}
@Book{Box2005,
title = {Statistics for Experimenters: Design, Innovation, and Discovery},
author = {George E. P. Box and J. Stuart Hunter and William G. Hunter},
publisher = {John Wiley \& Sons, Inc},
address = {Hoboken, New Jersey},
year = {2005},
edition = {2nd},
note = {ISBN 978-0471-71813-0},
}
@Book{robustbase2006,
author = {Ricardo A. Maronna and R. Douglas Martin and Victor J. Yohai},
title = {Robust Statistics, Theory and Methods},
year = {2006},
publisher = {John Wiley \& Sons, Ltd},
ISBN = {0-470-01092-4},
series = {Wiley Series in Probility and Statistics},
}
@article{ggnetwork2017,
author = {Sam Tyner and François Briatte and Heike Hofmann},
title = {{Network Visualization with ggplot2}},
year = {2017},
journal = {{The R Journal}},
doi = {10.32614/RJ-2017-023},
url = {https://doi.org/10.32614/RJ-2017-023},
pages = {27--59},
volume = {9},
number = {1}
}
@Article{xie2019,
title = {{TinyTeX}: A lightweight, cross-platform, and easy-to-maintain LaTeX distribution based on {TeX Live}},
author = {Yihui Xie},
journal = {TUGboat},
year = {2019},
volumne = {40},
number = {1},
pages = {30--32},
url = {https://tug.org/TUGboat/Contents/contents40-1.html},
}
@Article{Qiu2015,
author = {Yixuan Qiu},
title = {{showtext}: Using System Fonts in {R} Graphics},
journal = {The R Journal},
year = {2015},
volume = {7},
number = {1},
pages = {99--108},
month = {jun},
doi = {10.32614/RJ-2015-008},
}
@Article{stringdist2014,
title = {The stringdist package for approximate string matching},
author = {M.P.J. {van der Loo}},
year = {2014},
journal = {The {R} {J}ournal},
volume = {6},
issue = {1},
url = {https://CRAN.R-project.org/package=stringdist},
pages = {111-122},
}
@Article{Lawrence2001,
title = {Interval Estimation for a Binomial Proportion},
author = {Lawrence D. Brown and T. Tony Cai and Anirban DasGupta},
journal = {Statistical Science},
year = {2001},
volumne = {16},
number = {2},
pages = {101--133},
url = {https://projecteuclid.org/euclid.ss/1009213286},
}
@Inbook{Deb2005,
author = "Deb, Kalyanmoy",
editor = "Burke, Edmund K. and Kendall, Graham",
title = "Multi-Objective Optimization",
bookTitle = "Search Methodologies: Introductory Tutorials in Optimization and Decision Support Techniques",
year = "2005",
publisher = "Springer US",
address = "Boston, MA",
pages = "273--316",
abstract = "Many real-world search and optimization problems are naturally posed as non-linear programming problems having multiple objectives. Due to the lack of suitable solution techniques, such problems were artificially converted into a single-objective problem and solved. The difficulty arose because such problems give rise to a set of trade-off optimal solutions (known as Pareto-optimal solutions), instead of a single optimum solution. It then becomes important to find not just one Pareto-optimal solution, but as many of them as possible. This is because any two such solutions constitutes a trade-off among the objectives and users would be in a better position to make a choice when many such trade-off solutions are unveiled.",
isbn = "978-0-387-28356-2",
doi = "10.1007/0-387-28356-0_10",
url = "https://doi.org/10.1007/0-387-28356-0_10"
}
@Article{mgcViz,
author = {Matteo Fasiolo and Raphael Nedellec and Yannig Goude and Simon N. Wood},
title = {Scalable visualisation methods for modern Generalized Additive Models.},
journal = {Arxiv preprint},
year = {2018},
url = {https://arxiv.org/abs/1809.10632},
}
@Article{heatmaply2017,
author = {{Galili} and {Tal} and {O'Callaghan} and {Alan} and {Sidi} and {Jonathan} and {Sievert} and {Carson}},
title = {{heatmaply}: an R package for creating interactive cluster heatmaps for online publishing},
journal = {Bioinformatics},
year = {2017},
volume = {34},
number = {9},
doi = {10.1093/bioinformatics/btx657},
}
@article{Paul_2000_Approach,
author = {Paul Murrell and Ross Ihaka},
title = {An Approach to Providing Mathematical Annotation in Plots},
journal = {Journal of Computational and Graphical Statistics},
volume = {9},
number = {3},
pages = {582--599},
year = {2000},
}
@article{Paul_2003_Integrating,
author = {Paul Murrell},
title = {Integrating grid Graphics Output with Base Graphics Output},
journal = {R News},
volume = {3},
number = {2},
pages = {7--12},
year = {2003},
}
@Article{beanplot_2008_jss,
title = {{beanplot}: A Boxplot Alternative for Visual Comparison of Distributions},
author = {Peter Kampstra},
journal = {Journal of Statistical Software},
year = {2008},
volume = {28},
number = {1},
pages = {1--9},
url = {http://www.jstatsoft.org/v28/c01/},
}
@Article{ROI2020,
title = {{ROI}: An Extensible {R} Optimization Infrastructure},
author = {Stefan Theu{\ss}l and Florian Schwendinger and Kurt Hornik},
journal = {Journal of Statistical Software},
year = {2020},
volume = {94},
number = {15},
pages = {1--64},
doi = {10.18637/jss.v094.i15},
}
@Book{Nocedal2006,
doi = {10.1007/978-0-387-40065-5},
year = {2006},
publisher = {Springer, New York, NY},
title = {Numerical Optimization},
author = {Jorge Nocedal and Stephen J. Wright},
edition = {2nd},
isbn = {978-0-387-30303-1},
address = {New York, NY},
}
@Article{Nash2014,
author = {John C. Nash},
title = {On Best Practice Optimization Methods in R},
journal = {Journal of Statistical Software},
volume = {60},
number = {2},
year = {2014},
pages = {1--14},
doi = {10.18637/jss.v060.i02},
url = {https://www.jstatsoft.org/v060/i02}
}
@Article{GPareto2019,
title = {{GPareto}: An {R} Package for Gaussian-Process-Based Multi-Objective Optimization and Analysis},
author = {Micka\"el Binois and Victor Picheny},
journal = {Journal of Statistical Software},
year = {2019},
volume = {89},
number = {8},
pages = {1--30},
doi = {10.18637/jss.v089.i08},
}
@Article{GA2013,
title = {{GA}: A Package for Genetic Algorithms in {R}},
author = {Luca Scrucca},
journal = {Journal of Statistical Software},
year = {2013},
volume = {53},
number = {4},
pages = {1--37},
url = {https://www.jstatsoft.org/v53/i04/},
}
@Article{GA2017,
title = {On some extensions to {GA} package: hybrid optimisation, parallelisation and islands evolution},
author = {Luca Scrucca},
journal = {The R Journal},
year = {2017},
volume = {9},
number = {1},
pages = {187--206},
url = {https://journal.r-project.org/archive/2017/RJ-2017-008/},
}
@Book{NMOF2019,
title = {Numerical Methods and Optimization in Finance},
author = {Manfred Gilli and Dietmar Maringer and Enrico Schumann},
year = {2019},
publisher = {Elsevier/Academic Press},
address = {Waltham, MA, USA},
url = {http://www.enricoschumann.net/NMOF/},
note = {ISBN 978-0128150658},
edition = {Second},
}
@Article{CVXR2020,
title = {{CVXR}: An {R} Package for Disciplined Convex Optimization},
author = {Anqi Fu and Balasubramanian Narasimhan and Stephen Boyd},
journal = {Journal of Statistical Software},
year = {2020},
volume = {94},
number = {14},
pages = {1--34},
doi = {10.18637/jss.v094.i14},
}
@article{Waskom2021,
doi = {10.21105/joss.03021},
url = {https://doi.org/10.21105/joss.03021},
year = {2021},
publisher = {The Open Journal},
volume = {6},
number = {60},
pages = {3021},
author = {Michael L. Waskom},
title = {seaborn: statistical data visualization},
journal = {Journal of Open Source Software}
}
@Article{Ryacas2019,
title = {{Ryacas}: A computer algebra system in R},
author = {Mikkel Meyer Andersen and Søren Højsgaard},
journal = {Journal of Open Source Software},
year = {2019},
volume = {4},
number = {42},
url = {https://doi.org/10.21105/joss.01763},
}
@article{RJ-2021-004,
author = {Peter Kasprzak and Lachlan Mitchell and Olena Kravchuk and
Andy Timmins},
title = {{Six Years of Shiny in Research - Collaborative Development
of Web Tools in R}},
year = {2021},
journal = {{The R Journal}},
doi = {10.32614/RJ-2021-004},
url = {https://doi.org/10.32614/RJ-2021-004},
pages = {155--162},
volume = {12},
number = {2}
}
@Article{trustOptim,
title = {{trustOptim}: An {R} Package for Trust Region Optimization
with Sparse Hessians},
author = {Michael Braun},
journal = {Journal of Statistical Software},
year = {2014},
volume = {60},
number = {4},
pages = {1--16},
url = {https://doi.org/10.18637/jss.v060.i04},
}
@Book{Lehmann2005,
title = {Testing Statistical Hypotheses},
author = {Lehmann, Erich L. and Romano, Joseph P.},
publisher = {Springer-Verlag New York},
address = {New York, NY},
year = {2005},
edition = {3rd},
doi = {10.1007/0-387-27605-X},
note = {ISBN 978-0-387-98864-1},
}
@Book{plotly2020,
title = {Interactive web-based data visualization with R, plotly, and shiny},
author = {Carson Sievert},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2020},
edition = {1st},
note = {ISBN 978-1138331457},
url = {https://plotly-r.com/},
}
@article{ludecke2019insight,
journal = {Journal of Open Source Software},
doi = {10.21105/joss.01412},
number = {38},
publisher = {The Open Journal},
title = {{insight}: A Unified Interface to Access Information from Model Objects in R},
volume = {4},
author = {Lüdecke, Daniel and Waggoner, Philip and Makowski, Dominique},
pages = {1412},
year = {2019},
}
@Article{Beall1942,
title = {The Transformation of Data from Entomological Field Experiments so that the Analysis of Variance Becomes Applicable},
author = {Geoffrey Beall},
journal = {Biometrika},
publisher = {Biometrika Trust},
doi = {10.2307/2332128},
number = {3/4},
volume = {32},
pages = {243-262},
url = {https://www.jstor.org/stable/2332128},
year = {1942},
}
@Article{makowski2019bayestestr,
title = {{bayestestR}: Describing Effects and their Uncertainty, Existence and Significance within the Bayesian Framework},
volume = {4},
doi = {10.21105/joss.01541},
number = {40},
journal = {Journal of Open Source Software},
author = {Makowski, Dominique and Ben-Shachar, Mattan and Lüdecke, Daniel},
year = {2019},
pages = {1541},
}
@Book{KernSmooth1995,
title = {Kernel Smoothing},
author = {M. P. Wand and M. C. Jones},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {1995},
edition = {1st},
note = {ISBN 978-0412552700},
url = {http://matt-wand.utsacademics.info/webWJbook/},
}
@Book{MVKSA2018,
title = {Multivariate Kernel Smoothing and Its Applications},
author = {Jos\'e Chac\'on and Tarn Duong},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2018},
edition = {1st},
note = {ISBN 978-1498763011},
url = {http://www.mvstat.net/mvksa/mvksa.pdf},
}
@Book{Lawson2014,
title = {Design and Analysis of Experiments with R},
author = {John Lawson},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2014},
edition = {1st},
note = {ISBN 978-1498728485},
url = {http://www.mvstat.net/mvksa/mvksa.pdf},
}
@Book{car2019,
title = {An R Companion to Applied Regression},
author = {John Fox and Sanford Weisberg},
publisher = {Sage Publications},
address = {Thousand Oaks, California},
year = {2019},
edition = {3rd},
note = {ISBN 978-1-5443-3647-3},
url = {https://socialsciences.mcmaster.ca/jfox},
}
@Book{Cohen1988,
title = {Statistical Power Analysis for the Behavioral Sciences},
author = {Jacob Cohen},
publisher = {Lawrence Erlbaum Associates},
address = {Hillsdale, NJ},
year = {1988},
edition = {2nd},
note = {ISBN 0-8058-0283-5},
url = {https://www.utstat.toronto.edu/~brunner/oldclass/378f16/readings/CohenPower.pdf},
}
@Book{Berger2018,
title = {Experimental Design},
subtitle = {With Application in Management, Engineering, and the Sciences.},
author = {Paul Berger and Robert Maurer and Giovana B. Celli},
publisher = {Springer International Publishing},
address = {New York, NY},
doi = {10.1007/978-3-319-64583-4},
year = {2018},
edition = {2nd},
note = {ISBN 978-3-319-64582-7},
}
@Book{Berger2002,
title = {Experimental Design},
subtitle = {With Application in Management, Engineering, and the Sciences.},
author = {Paul Berger and Robert Maurer},
publisher = {Duxbury},
year = {2002},
edition = {1st},
note = {ISBN 0-534-35822-5},
}
@Book{Berger2015,
title = {Improving the User Experience through Practical Data Analytics: Gain Meaningful Insight and Increase Your Bottom Line},
author = {Mike Fritz and Paul D. Berger},
publisher = {Morgan Kaufmann},
year = {2015},
edition = {1st},
note = {ISBN 978-0128006351},
}
@Book{Dobson_1983_Modelling,
title = {An Introduction to Statistical Modelling},
author = {Annette J. Dobson},
publisher = {Chapman and Hall/CRC},
address = {London},
year = {1983},
edition = {1st},
note = {ISBN 978-0412248603},
doi = {10.1007/978-1-4899-3174-0},
}
@Book{Action_2015_Robert,
title = {R in Action: Data Analysis and Graphics with R},
author = {Robert I. Kabacoff},
publisher = {Manning PUblications Co.},
address = {Shelter Island, NY},
year = {2015},
edition = {2nd},
note = {ISBN 978-1617291388},
url = {https://github.com/kabacoff/RiA2},
}
@Book{Prob_2011_Mao,
title = {概率论与数理统计教程},
author = {茆诗松 and 程依明 and 濮晓龙},
publisher = {高等教育出版社},
address = {北京},
year = {2011},
edition = {2nd},
note = {ISBN 978-7-04-031210-2},
}
@Book{Prob_2006_Mao,
title = {高等数理统计},
author = {茆诗松 and 程依明 and 濮晓龙},
publisher = {高等教育出版社},
address = {北京},
year = {2006},
edition = {2nd},
note = {ISBN 978-7-04-019321-3},
}
@Book{Design_2004_Mao,
title = {试验设计},
author = {茆诗松 and 周纪芗 and 陈颖},
publisher = {中国统计出版社},
address = {北京},
year = {2004},
edition = {1st},
note = {ISBN 7-5037-4316-6},
}
@Book{Stat_1981_Chen,
title = {数理统计引论},
author = {陈希孺},
publisher = {科学出版社},
address = {北京},
year = {1981},
}
@Article{Stone_2009_Wei,
title = {《红楼梦》前80回与后40回某些文风差异的统计分析（两个独立二项总体等价性检验的一个应用）},
author = {韦博成},
journal = {应用概率统计},
year = {2009},
volume = {25},
number = {4},
pages = {441-448},
doi = {10.3969/j.issn.1001-4268.2009.04.012},
}
@Article{Prop_2011_Song,
title = {两个二项总体成功概率的比较},
author = {宋泽熙},
journal = {中国校外教育（理论）},
year = {2011},
volume = {z1},
pages = {81},
doi = {10.3969/j.issn.1004-8502-B.2011.z1.0919},
}
@Book{Berk2020,
title = {Statistical Learning From A Regression Perspective},
author = {Richard A. Berk},
publisher = {Springer, Cham},
year = {2020},
edition = {3rd},
note = {ISBN 978-3-319-44048-4},
}
@Book{xie2016,
title = {bookdown: Authoring Books and Technical Documents with {R} Markdown},
author = {Yihui Xie},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2016},
note = {ISBN 978-1138700109},
url = {https://github.com/rstudio/bookdown},
}
@Book{xie2018,
title = {R Markdown: The Definitive Guide},
author = {Yihui Xie and J.J. Allaire and Garrett Grolemund},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2018},
note = {ISBN 9781138359338},
url = {https://bookdown.org/yihui/rmarkdown},
}
@Book{Ron2020,
title = {Trustworthy Online Controlled Experiments: A Practical Guide to A/B Testing},
author = {Ron Kohavi and Diane Tang and Ya Xu},
publisher = {Cambridge University Press},
address = {Cambridge, United Kingdom},
year = {2020},
note = {ISBN 9781108724265},
url = {https://experimentguide.com/},
}
@Book{Empirical_1987_Box,
title = {Empirical Model-Building and Response Surfaces},
author = {George E. P. Box and Norman R. Draper},
publisher = {John Wiley \& Sons},
address = {New York, NY},
year = {1987},
pages = {424--424},
note = {ISBN 0-471-81033-9},
}
@Book{Statisticians_1997_Johnson,
title = {Leading Personalities in Statistical Sciences: From the Seventeenth Century to the Present},
author = {Norman L. Johnson and Samuel Kotz},
publisher = {John Wiley \& Sons},
address = {New York, NY},
year = {1997},
note = {ISBN 0-471-16381-3},
}
@Book{Statisticians_2014_Lin,
title = {Past, Present, and Future of Statistical Science},
author = {Xihong Lin, Christian Genest, David L. Banks, Geert Molenberghs, David W. Scott, and Jane-Ling Wang},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2014},
note = {ISBN 978-1-4822-0498-8},
}
@InBook{Eaton_2007_MultiStat,
address = {Beachwood, Ohio, USA},
author = {Eaton, Morris L.},
booktitle = {Multivariate Statistics},
doi = {10.1214/lnms/1196285114},
pages = {302--333},
publisher = {Institute of Mathematical Statistics},
series = {Lecture Notes -- Monograph Series},
title = {Chapter 8: The Wishart Distribution},
url = {https://doi.org/10.1214/lnms/1196285114},
volume = {53},
year = {2007}
}
@Article{Lawrence_1986_Dist,
URL = {https://www.jstor.org/stable/2684876},
author = {Lawrence M. Leemis},
journal = {The American Statistician},
number = {2},
pages = {143--146},
title = {Relationships Among Common Univariate Distributions},
volume = {40},
year = {1986}
}
@Article{Practical_2019_lu,
title = {Practical Bayesian modeling and inference for massive spatial data sets on modest computing environments},
author = {Zhang, Lu and Datta, Abhirup and Banerjee, Sudipto.},
journal = {Statistical Analysis and Data Mining: The ASA Data Science Journal},
year = {2019},
volume = {12},
number = {3},
pages = {179--209},
doi = {10.1002/sam.11413},
}
@Article{Estimation_1988_Vecchia,
title = {Estimation and Model Identification for Continuous Spatial Processes},
author = {A. V. Vecchia.},
journal = {Journal of the Royal Statistical Society. Series B (Methodological)},
year = {1988},
volume = {50},
number = {2},
pages = {297--312},
url = {https://www.jstor.org/stable/2345768},
}
@Article{John_1986_Sunset,
title = {Sunset Salvo},
author = {John W. Tukey},
journal = {The American Statistician},
year = {1986},
volume = {40},
number = {1},
pages = {72--76},
doi = {10.2307/2683137},
url = {https://www.jstor.org/stable/2683137},
}
@Article{ReacTran2012,
title = {Reactive transport in aquatic ecosystems: Rapid model prototyping in the open source software {R}},
author = {Karline Soetaert and Filip Meysman},
journal = {Environmental Modelling \& Software},
year = {2012},
volume = {32},
pages = {49--60},
}
@Article{AOV_1940_HSU,
title = {On Generalized Analysis of Variance. (I)},
author = {P. L. HSU},
journal = {Biometrika},
year = {1940},
volume = {31},
number = {3-4},
pages = {221-237},
doi = {10.1093/biomet/31.3-4.221},
}
@Article{Corr_1941_HSU,
title = {On The Limiting Distribution of The Canonical Correlations},
author = {P. L. HSU},
journal = {Biometrika},
year = {1941},
volume = {32},
number = {1},
pages = {38-45},
doi = {10.1093/biomet/32.1.38},
}
@Article{Table_1960_HSU,
title = {On the Power Function of the Exact Test for the $2\times 2$ Contingency Table},
author = {B. M. BENNETT and P. L. HSU},
journal = {Biometrika},
year = {1960},
volume = {47},
number = {3-4},
pages = {393-398},
doi = {10.1093/biomet/47.3-4.393},
}
@Article{AOV_1941_HSU,
title = {Analysis of Variance From The Power Function Standpoint},
author = {P. L. HSU},
journal = {Biometrika},
year = {1941},
volume = {32},
number = {1},
pages = {62-69},
doi = {10.1093/biomet/32.1.62},
}
@Article{E2T2_1945_HSU,
title = {On the Power Functions of the $E^2$-Test and the $T^2$-Test},
author = {P. L. Hsu},
journal = {The Annals of Mathematical Statistics},
number = {3},
pages = {278--286},
volume = {16},
year = {1945},
URL = {https://www.jstor.org/stable/2235706},
}
@Article{Test_1934_binom,
author = {Clopper, C. J. and Pearson, E. S.},
title = {The Use of Confidence or Fiducial Limits Illustrated In The Case of The Binomial},
journal = {Biometrika},
volume = {26},
number = {4},
pages = {404-413},
year = {1934},
month = {12},
doi = {10.1093/biomet/26.4.404},
}
@Article{Test_1927_prop,
author = {Wilson, Edwin B.},
title = {Probable inference, the law of succession, and statistical inference},
journal = {Journal of the American Statistical Association},
volume = {22},
number = {158},
pages = {209-212},
year = {1927},
month = {6},
doi = {10.1080/01621459.1927.10502953},
}
@misc{Ripley_2004_DM,
title = {Data Mining: Large Databases and Methods},
journal = {useR! 2004 - The R User Conference},
author = {Brian D. Ripley},
year = {2004},
month = {5},
address = {Technische Universität Wien, Vienna, Austria},
date = {2004-05-20},
urldate = {2019-10-29},
url = {https://www.r-project.org/conferences/useR-2004/Keynotes/Ripley.pdf},
}
@misc{Ripley_2002_SS,
title = {Statistical Methods Need Software: A View of Statistical Computing},
journal = {Opening Lecture Royal Statistical Society},
author = {Brian D. Ripley},
year = {2002},
month = {9},
address = {Plymouth},
date = {2002-09-04},
urldate = {2019-11-09},
url = {https://www.stats.ox.ac.uk/~ripley/RSS2002.pdf},
}
@Article{Breiman_2001_Modeling,
author = {Leo Breiman},
title = {Statistical Modeling: The Two Cultures (with comments and a rejoinder by the author)},
journal = {Journal of the American Statistical Association},
volume = {16},
number = {3},
pages = {199-231},
year = {2001},
month = {12},
doi = {10.1214/ss/1009213726},
}
@Article{Zeileis_2002_lmtest,
title = {Diagnostic Checking in Regression Relationships},
author = {Achim Zeileis and Torsten Hothorn},
journal = {R News},
year = {2002},
volume = {2},
number = {3},
pages = {7--10},
url = {https://CRAN.R-project.org/doc/Rnews/},
}
@Article{Kuznetsova_2017_lmerTest,
title = {{lmerTest} Package: Tests in Linear Mixed Effects Models},
author = {Alexandra Kuznetsova and Per B. Brockhoff and Rune H. B. Christensen},
journal = {Journal of Statistical Software},
year = {2017},
volume = {82},
number = {13},
pages = {1--26},
doi = {10.18637/jss.v082.i13},
}
@Article{JSS_2016_PoweR,
title = {{PoweR}: A Reproducible Research Tool to Ease Monte Carlo Power Simulation Studies for Goodness-of-fit Tests in {R}},
author = {Pierre {Lafaye de Micheaux} and Viet Anh Tran},
journal = {Journal of Statistical Software},
year = {2016},
volume = {69},
number = {3},
pages = {1--42},
doi = {10.18637/jss.v069.i03},
}
@Article{Hothorn_2008_coin,
title = {Implementing a class of permutation tests: The {coin} package},
author = {Torsten Hothorn and Kurt Hornik and Mark A. {van de Wiel} and Achim Zeileis},
journal = {Journal of Statistical Software},
year = {2008},
volume = {28},
number = {8},
pages = {1--23},
doi = {10.18637/jss.v028.i08},
}
@article{JSS_2007_pls,
author = {Björn-Helge Mevik and Ron Wehrens},
title = {The {pls} Package: Principal Component and Partial Least Squares Regression in R},
journal = {Journal of Statistical Software},
volume = {18},
number = {2},
year = {2007},
pages = {1--23},
doi = {10.18637/jss.v018.i02},
url = {https://www.jstatsoft.org/v018/i02}
}
@InProceedings{Pu_2020_Grammar,
author = {Pu, Xiaoying and Kay, Matthew},
title = {A Probabilistic Grammar of Graphics},
year = {2020},
isbn = {9781450367080},
publisher = {Association for Computing Machinery},
address = {New York, NY, USA},
url = {https://doi.org/10.1145/3313831.3376466},
doi = {10.1145/3313831.3376466},
abstract = {Visualizations depicting probabilities and uncertainty are used everywhere from medical risk communication to machine learning, yet these probabilistic visualizations are difficult to specify, prone to error, and their designs are cumbersome to explore. We propose a Probabilistic Grammar of Graphics (PGoG), an extension to Wilkinson's original framework. Inspired by the success of probabilistic programming languages, PGoG makes probability expressions, such as P(A|B), a first-class citizen in the language. PGoG abstractions also reflect the distinction between probability and frequency framing, a concept from the uncertainty communication literature. It is expressive, encompassing product plots, density plots, icon arrays, and dotplots, among other visualizations. Its coherent syntax ensures correctness (that the proportions of visual elements and their spatial placement reflect the underlying probability distribution) and reduces edit distance between probabilistic visualization specifications, potentially supporting more design exploration. We provide a proof-of-concept implementation of PGoG in R.},
booktitle = {Proceedings of the 2020 CHI Conference on Human Factors in Computing Systems},
pages = {1–13},
numpages = {13},
keywords = {uncertainty visualization, grammar of graphics},
location = {Honolulu, HI, USA},
}
@Article{Gu_2016_heatmap,
title = {Complex heatmaps reveal patterns and correlations in multidimensional genomic data},
author = {Zuguang Gu and Roland Eils and Matthias Schlesner},
journal = {Bioinformatics},
year = {2016},
}
@Article{Hadley_2019_tidyverse,
title = {Welcome to the {tidyverse}},
author = {Hadley Wickham and Mara Averick and Jennifer Bryan and Winston Chang and Lucy D'Agostino McGowan and Romain François and Garrett Grolemund and Alex Hayes and Lionel Henry and Jim Hester and Max Kuhn and Thomas Lin Pedersen and Evan Miller and Stephan Milton Bache and Kirill Müller and Jeroen Ooms and David Robinson and Dana Paige Seidel and Vitalie Spinu and Kohske Takahashi and Davis Vaughan and Claus Wilke and Kara Woo and Hiroaki Yutani},
year = {2019},
journal = {Journal of Open Source Software},
volume = {4},
number = {43},
pages = {1686},
doi = {10.21105/joss.01686},
}
@Article{Ross_1996_R,
title = {{R}: A Language for Data Analysis and Graphics},
journal = {Journal of Computational and Graphical Statistics},
volume = {5},
number = {3},
pages = {299--314},
year = {1996},
author = {Ross Ihaka and Robert Gentleman},
}
@Article{Brian_2001_date,
author = {Brian D. Ripley and Kurt Hornik},
title = {Date-Time Classes},
journal = {R News},
year = {2001},
volume = {1},
number = {2},
pages = {8--11},
month = {June},
url = {https://cran.r-project.org/doc/Rnews/Rnews_2001-2.pdf},
}
@Article{Gabor_2004_date,
author = {Gabor Grothendieck and Thomas Petzoldt},
title = {{R} {H}elp {D}esk: {Date} and Time Classes in {R}},
journal = {R News},
year = {2004},
volume = {4},
number = {1},
pages = {29--32},
month = {June},
url = {https://www.r-project.org/doc/Rnews/Rnews_2004-1.pdf},
}
@Article{Xie_2013_animation,
title = {{animation}: An {R} Package for Creating Animations and Demonstrating Statistical Methods},
author = {Yihui Xie},
journal = {Journal of Statistical Software},
year = {2013},
volume = {53},
number = {1},
pages = {1--27},
url = {http://www.jstatsoft.org/v53/i01/},
}
@Article{Tang_2016_ggfortify,
author = {Yuan Tang and Masaaki Horikoshi and Wenxuan Li},
title = {{ggfortify}: Unified Interface to Visualize Statistical Results of Popular R Packages},
year = {2016},
journal = {{The R Journal}},
doi = {10.32614/RJ-2016-060},
url = {https://journal.r-project.org/archive/2016/RJ-2016-060/RJ-2016-060.pdf},
pages = {474--485},
volume = {8},
number = {2},
}
@Article{Peter_1990_epil,
author = {Peter F. Thall and Stephen C. Vail},
journal = {Biometrics},
number = {3},
pages = {657--671},
title = {Some Covariance Models for Longitudinal Count Data with Overdispersion},
volume = {46},
year = {1990},
URL = {https://www.jstor.org/stable/2532086},
}
@TechReport{colorspace_2019,
title = {{colorspace}: A Toolbox for Manipulating and Assessing Colors and Palettes},
author = {Achim Zeileis and Jason C. Fisher and Kurt Hornik and Ross Ihaka and Claire D. McWhite and Paul Murrell and Reto Stauffer and Claus O. Wilke},
year = {2019},
institution = {arXiv.org E-Print Archive},
type = {arXiv},
number = {1903.06490},
month = {March},
url = {http://arxiv.org/abs/1903.06490},
}
@Article{colorspace_2009_rainbow,
title = {Somewhere over the Rainbow: How to Make Effective Use of Colors in Meteorological Visualizations},
author = {Reto Stauffer and Georg J. Mayr and Markus Dabernig and Achim Zeileis},
journal = {Bulletin of the American Meteorological Society},
year = {2009},
volume = {96},
number = {2},
pages = {203--216},
doi = {10.1175/BAMS-D-13-00155.1},
}
@Article{colorspace_2009_rgb,
title = {Escaping {RGB}land: Selecting Colors for Statistical Graphics},
author = {Achim Zeileis and Kurt Hornik and Paul Murrell},
journal = {Computational Statistics \& Data Analysis},
year = {2009},
volume = {53},
number = {9},
pages = {3259--3270},
doi = {10.1016/j.csda.2008.11.033},
}
@Article{Tukey_1962_Data,
author = {John W. Tukey},
title = {The Future of Data Analysis},
year = {1962},
journal = {The Annals of Mathematical Statistics},
doi = {10.1214/aoms/1177704711},
pages = {1--67},
volume = {33},
number = {1},
}
@inproceedings{seabold_2010_statsmodels,
title = {statsmodels: Econometric and statistical modeling with python},
author = {Seabold, Skipper and Perktold, Josef},
booktitle = {9th Python in Science Conference},
year = {2010},
}
@Article{spikeSlabGAM_2011_Scheipl,
title = {{spikeSlabGAM}: {B}ayesian Variable Selection, Model Choice and Regularization for Generalized Additive Mixed Models in {R}},
author = {Fabian Scheipl},
journal = {Journal of Statistical Software},
year = {2011},
volume = {43},
number = {14},
pages = {1--24},
url = {http://www.jstatsoft.org/v43/i14/},
}
@Book{David_2000_Logistic,
title = {Applied Logistic Regression},
author = {David W. Hosmer and Stanley Lemeshow},
publisher = {John Wiley \& Sons},
address = {New York, NY},
year = {2000},
edition = {Second},
note = {ISBN 0-471-72214-6},
}
@Book{Train_2009_mlogit,
title = {Discrete Choice Methods with Simulation},
author = {Kenneth E. Train},
publisher = {Cambridge University Press},
address = {New York, NY},
year = {2009},
edition = {Second},
note = {ISBN 9780511805271},
}
@Book{Bates_1988_Nonlinear,
title = {Nonlinear Regression Analysis and Its Applications},
author = {Douglas M. Bates and Donald G. Watts},
publisher = {John Wiley \& Sons},
address = {New York, NY},
year = {1988},
url = {https://doi.org/10.1002/9780470316757.app2},
}
@Book{breiman_1984_classification,
title = {Classification and regression trees},
author = {Leo Breiman and Jerome H. Friedman and Richard A. Olshen and Charles J. Stone},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {1984},
note = {ISBN 0-412-04841-8},
}
@Book{Boyd_2018_matrix,
title = {Introduction to Applied Linear Algebra: Vectors, Matrices, and Least Squares},
author = {Stephen Boyd and Lieven Vandenberghe},
publisher = {Cambridge University Press},
address = {New York, NY},
year = {2018},
url = {https://web.stanford.edu/~boyd/vmls/vmls.pdf},
}
@Book{Brillinger_2001_TSD,
author = {Brillinger, David R.},
title = {Time Series: Data Analysis and Theory},
year = {2001},
isbn = {0-89871-501-6},
publisher = {Society for Industrial and Applied Mathematics},
address = {Philadelphia, PA, USA},
}
@Book{Kutner_2005_Applied,
title = {Applied Linear Statistical Models},
author = {Michael H. Kutner and Christopher J. Nachtsheim and John Neter and William Li},
publisher = {McGraw-Hill/Irwin},
address = {New York, NY},
year = {2005},
edition = {Fifth},
note = {ISBN 0-07-238688-6},
}
@Book{Regression_2017_Young,
title = {Handbook of Regression Methods},