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DESCRIPTION
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DESCRIPTION
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Package: SpaTalk
Title: Infer Cell-Cell Communication for Spatial Transcriptomics
Version: 1.0
Depends: R (>= 4.0.0), ggalluvial, doParallel
Authors@R:
person("Xin", "Shao", , "[email protected]", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-1928-3878"))
Description: This package can infer cell-cell communication for spatial transcriptomics.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Imports:
Seurat (>= 3.0.0),
methods,
reshape2,
Matrix,
NNLM,
stringr,
progress,
stats,
ggplot2,
ggExtra,
crayon,
ggpubr,
grDevices,
scales,
scatterpie,
pheatmap,
corrplot,
circlize,
ggraph,
ggrepel,
igraph,
foreach,
parallel,
iterators,
readr
Suggests:
rmarkdown,
knitr,
prettydoc
VignetteBuilder: knitr