pom.xml

<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>
	<groupId>JLink</groupId>
	<artifactId>DiseasesChemicals</artifactId>
	<version>0.0.1</version>

	<repositories>
		<repository>
			<id>clojars.org</id>
			<name>CloJars</name>
			<url>http://clojars.org/repo/</url>
		</repository>
	</repositories>

	<dependencies>


		<dependency>
			<groupId>com.google.guava</groupId>
			<artifactId>guava</artifactId>
			<version>18.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-core</artifactId>
			<version>2.8.2</version>
		</dependency>

		<!-- https://mvnrepository.com/artifact/edu.stanford.nlp/stanford-corenlp -->
		<dependency>
			<groupId>edu.stanford.nlp</groupId>
			<artifactId>stanford-corenlp</artifactId>
			<version>3.8.0</version>
		</dependency>


		<!-- https://mvnrepository.com/artifact/org.apache.logging.log4j/log4j-api -->
		<dependency>
			<groupId>org.apache.logging.log4j</groupId>
			<artifactId>log4j-api</artifactId>
			<version>2.8.2</version>
		</dependency>
		<!-- https://mvnrepository.com/artifact/org.apache.lucene/lucene-core -->
		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-core</artifactId>
			<version>4.6.1</version>
		</dependency>
		<!-- https://mvnrepository.com/artifact/org.apache.lucene/lucene-analyzers-common -->
		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-analyzers-common</artifactId>
			<version>4.6.1</version>
		</dependency>

		<!-- https://mvnrepository.com/artifact/org.apache.lucene/lucene-queryparser -->
		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-queryparser</artifactId>
			<version>4.6.1</version>
		</dependency>
		<dependency>
			<groupId>de.citec.sc</groupId>
			<artifactId>BIRE</artifactId>
			<version>0.0.1-SNAPSHOT</version>
		</dependency>

	</dependencies>

	<build>
		<sourceDirectory>src</sourceDirectory>
		<resources>
			<resource>
				<directory>config</directory>
				<excludes>
					<exclude>**/*.java</exclude>
				</excludes>
			</resource>
		</resources>
		<plugins>
			<plugin>
				<artifactId>maven-compiler-plugin</artifactId>
				<version>3.3</version>
				<configuration>
					<source>1.8</source>
					<target>1.8</target>
					<excludes>
						<exclude>templates/ContentTemplate.java</exclude>
						<exclude>templates/DictionaryLookupTemplateBlownUp.java</exclude>
						<exclude>templates/DictionaryTemplate.java</exclude>
						<exclude>templates/DiseaseRecognitionMorphologicalTemplate.java</exclude>
						<exclude>templates/DocumentLevelTemplate.java</exclude>
						<exclude>templates/MinimalMorphologicalTemplate.java</exclude>
						<exclude>templates/NCBIContextTemplate.java</exclude>
						<exclude>templates/ObjectiveFunctionTemplate.java</exclude>
						<exclude>templates/TESTTemplate.java</exclude>
						<exclude>corpus/parser/NCBIRegexTokenizer.java</exclude>
						<exclude>corpus/parser/NCBIStanfordTokenizer.java</exclude>
						<exclude>evaluation/NCBI_DiseaseLearningBAK.java</exclude>
						<exclude>evaluation/NCBI_DiseaseLearning2.java</exclude>
						<exclude>learner/DefaultLearner.java</exclude>
						<exclude>evaluation/NCBI_DiseaseLearningBAK2.java</exclude>
						<exclude>templates/InverseTokenIntersectionTemplate.java</exclude>
						<exclude>templates/DictionaryLookupTemplateFlatBEFORE_PUBLICATION.java</exclude>
						<exclude>templates/DictionaryLookupTemplateFlatBEST.java</exclude>
						<exclude>templates/DictionaryLookupTemplateFlatMESSIE.java</exclude>
						<exclude>medic/dict/DiseaseDictionaryFactoryBACK.java</exclude>
						<exclude>baseline/dnorm/EvaluateWebDNorm.java</exclude>
						<exclude>playground/DirectEntryMatchAndDisambiguationStream.java</exclude>
						<exclude>playground/TermToListOfIDs.java</exclude>
						<exclude>templates/DictionaryLookupTemplateFlat.java</exclude>
						<exclude>tokenization/StanfordLemmatizer.java</exclude>
						<exclude>templates/MorphologicalTemplate.java</exclude>
						<exclude>templates/DictionaryTRIDFTemplate.java</exclude>
						<exclude>medic/dict/DiseaseDictionary.java</exclude>
						<exclude>medic/dict/DiseaseDictionaryBackUP.java</exclude>
						<exclude>medic/dict/DiseaseDictionaryFactory.java</exclude>
						<exclude>playground/IDFDictionaryCheck.java</exclude>
					</excludes>
				</configuration>
			</plugin>
		</plugins>
	</build>
</project>