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Update AIRR Rearrangement TSV Interoperability Example to use nf-core/airrflow #802

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ustervbo opened this issue Sep 22, 2024 · 3 comments

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@ustervbo
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Since a lot of work has gone into the nf-core/airrflow, we could maybe update the chapter 'AIRR Rearrangement TSV Interoperability Example' to this?

Maybe Gisela Gabernet can be convinced to write a new example.

@ggabernet
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I'm happy to write an example on interoperability of both the AIRR rearrangement standard with nf-core/airrflow

@ustervbo
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ustervbo commented Oct 7, 2024

From the call: The better example would be how to generate an AIRR JSON. If for non-bioinformaticians, take a MiAIRR Excel and a few lines of code to create the json.

@javh
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javh commented Nov 4, 2024

What about linking out to airrflow and other workflows that use the AIRR standards (in addition to the software list)?

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