DRMSD computation

[ecvgit]

Is the DRMSD computed on all the backbone atoms (N, C-alpha and C') or just on C-alpha? Is the same methodology used in the DRMSD computation from third party servers too?

Is there a third party tool that can compute DRMSD in the manner described in the paper?

Thanks.

[alquraishi]

Hi, the dRMSD for evaluation purposes (i.e. what's reported in the paper) is computed on all backbone atoms. However, during model training, only the C_alpha's are being used to save on memory usage.

[Inspriatio]

Hi, the dRMSD for evaluation purposes (i.e. what's reported in the paper) is computed on all backbone atoms. However, during model training, only the C_alpha's are being used to save on memory usage.
@alquraishi What is the relationship between the value of dRMSD and Å, but the dRMSD value of T0286 I output here is [450.58282471], is there any conversion relationship with Å here?
Thanks in advance