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<p><img alt="" class="right image" src="assets/example.png" /></p>
<h1 id="simple-testing-framework-for-nextflow-pipelines">Simple testing framework for Nextflow pipelines</h1>
<p>Test your production ready Nextflow pipelines in an efficient and automated way. 🚀</p>
<h1 id="nf-test-a-simple-testing-framework-for-nextflow-pipelines">nf-test: A simple testing framework<br> for Nextflow pipelines</h1>
<p>Test your production ready <a href="https://nextflow.io">Nextflow pipelines</a> in an efficient and automated way. 🚀</p>
<p><a class="md-button md-button--primary" href="docs/getting-started/"><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M96 0C43 0 0 43 0 96v320c0 53 43 96 96 96h320c17.7 0 32-14.3 32-32s-14.3-32-32-32v-64c17.7 0 32-14.3 32-32V32c0-17.7-14.3-32-32-32H96zm0 384h256v64H96c-17.7 0-32-14.3-32-32s14.3-32 32-32zm32-240c0-8.8 7.2-16 16-16h192c8.8 0 16 7.2 16 16s-7.2 16-16 16H144c-8.8 0-16-7.2-16-16zm16 48h192c8.8 0 16 7.2 16 16s-7.2 16-16 16H144c-8.8 0-16-7.2-16-16s7.2-16 16-16z"/></svg></span> Getting Started</a> <a class="md-button" href="installation/"><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M288 32c0-17.7-14.3-32-32-32s-32 14.3-32 32v242.7l-73.4-73.4c-12.5-12.5-32.8-12.5-45.3 0s-12.5 32.8 0 45.3l128 128c12.5 12.5 32.8 12.5 45.3 0l128-128c12.5-12.5 12.5-32.8 0-45.3s-32.8-12.5-45.3 0L288 274.7V32zM64 352c-35.3 0-64 28.7-64 64v32c0 35.3 28.7 64 64 64h384c35.3 0 64-28.7 64-64v-32c0-35.3-28.7-64-64-64H346.5l-45.3 45.3c-25 25-65.5 25-90.5 0L165.5 352H64zm368 56a24 24 0 1 1 0 48 24 24 0 1 1 0-48z"/></svg></span> Installation</a> <a class="md-button" href="https://github.com/askimed/nf-test"><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 496 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M165.9 397.4c0 2-2.3 3.6-5.2 3.6-3.3.3-5.6-1.3-5.6-3.6 0-2 2.3-3.6 5.2-3.6 3-.3 5.6 1.3 5.6 3.6zm-31.1-4.5c-.7 2 1.3 4.3 4.3 4.9 2.6 1 5.6 0 6.2-2s-1.3-4.3-4.3-5.2c-2.6-.7-5.5.3-6.2 2.3zm44.2-1.7c-2.9.7-4.9 2.6-4.6 4.9.3 2 2.9 3.3 5.9 2.6 2.9-.7 4.9-2.6 4.6-4.6-.3-1.9-3-3.2-5.9-2.9zM244.8 8C106.1 8 0 113.3 0 252c0 110.9 69.8 205.8 169.5 239.2 12.8 2.3 17.3-5.6 17.3-12.1 0-6.2-.3-40.4-.3-61.4 0 0-70 15-84.7-29.8 0 0-11.4-29.1-27.8-36.6 0 0-22.9-15.7 1.6-15.4 0 0 24.9 2 38.6 25.8 21.9 38.6 58.6 27.5 72.9 20.9 2.3-16 8.8-27.1 16-33.7-55.9-6.2-112.3-14.3-112.3-110.5 0-27.5 7.6-41.3 23.6-58.9-2.6-6.5-11.1-33.3 2.6-67.9 20.9-6.5 69 27 69 27 20-5.6 41.5-8.5 62.8-8.5s42.8 2.9 62.8 8.5c0 0 48.1-33.6 69-27 13.7 34.7 5.2 61.4 2.6 67.9 16 17.7 25.8 31.5 25.8 58.9 0 96.5-58.9 104.2-114.8 110.5 9.2 7.9 17 22.9 17 46.4 0 33.7-.3 75.4-.3 83.6 0 6.5 4.6 14.4 17.3 12.1C428.2 457.8 496 362.9 496 252 496 113.3 383.5 8 244.8 8zM97.2 352.9c-1.3 1-1 3.3.7 5.2 1.6 1.6 3.9 2.3 5.2 1 1.3-1 1-3.3-.7-5.2-1.6-1.6-3.9-2.3-5.2-1zm-10.8-8.1c-.7 1.3.3 2.9 2.3 3.9 1.6 1 3.6.7 4.3-.7.7-1.3-.3-2.9-2.3-3.9-2-.6-3.6-.3-4.3.7zm32.4 35.6c-1.6 1.3-1 4.3 1.3 6.2 2.3 2.3 5.2 2.6 6.5 1 1.3-1.3.7-4.3-1.3-6.2-2.2-2.3-5.2-2.6-6.5-1zm-11.4-14.7c-1.6 1-1.6 3.6 0 5.9 1.6 2.3 4.3 3.3 5.6 2.3 1.6-1.3 1.6-3.9 0-6.2-1.4-2.3-4-3.3-5.6-2z"/></svg></span> Source</a></p>
<hr />
<p><a href=""><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M12 2C6.5 2 2 6.5 2 12s4.5 10 10 10 10-4.5 10-10S17.5 2 12 2m-2 15-5-5 1.41-1.41L10 14.17l7.59-7.59L19 8l-9 9Z"/></svg></span></a> A DSL language <strong>similar to Nextflow</strong> <br/>
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<a href=""><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M12 2C6.5 2 2 6.5 2 12s4.5 10 10 10 10-4.5 10-10S17.5 2 12 2m-2 15-5-5 1.41-1.41L10 14.17l7.59-7.59L19 8l-9 9Z"/></svg></span></a> Easy installation on <strong>CI systems</strong> <br/></p>
<hr />
<h2 id="unit-testing"><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M.41 13.41 6 19l1.41-1.42L1.83 12m20.41-6.42L11.66 16.17 7.5 12l-1.43 1.41L11.66 19l12-12M18 7l-1.41-1.42-6.35 6.35 1.42 1.41L18 7Z"/></svg></span> Unit testing</h2>
<p>nf-test enables you to test all components of your data science pipeline: from end-to-end testing of the entire pipeline to specific tests of processes or even custom functions. This ensures that all testing is conducted consistently, promoting reliability across your project.</p>
<p>nf-test enables you to test all components of your data science pipeline: from end-to-end testing of the entire pipeline to specific tests of processes or even custom functions. This ensures that all testing is conducted consistently across your project.</p>
<div class="tabbed-set tabbed-alternate" data-tabs="1:3"><input checked="checked" id="__tabbed_1_1" name="__tabbed_1" type="radio" /><input id="__tabbed_1_2" name="__tabbed_1" type="radio" /><input id="__tabbed_1_3" name="__tabbed_1" type="radio" /><div class="tabbed-labels"><label for="__tabbed_1_1"><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 576 512"><!--! Font Awesome Free 6.4.2 by @fontawesome - https://fontawesome.com License - https://fontawesome.com/license/free (Icons: CC BY 4.0, Fonts: SIL OFL 1.1, Code: MIT License) Copyright 2023 Fonticons, Inc.--><path d="M0 80c0-26.5 21.5-48 48-48h96c26.5 0 48 21.5 48 48v16h192V80c0-26.5 21.5-48 48-48h96c26.5 0 48 21.5 48 48v96c0 26.5-21.5 48-48 48h-96c-26.5 0-48-21.5-48-48v-16H192v16c0 1.7-.1 3.4-.3 5L272 288h96c26.5 0 48 21.5 48 48v96c0 26.5-21.5 48-48 48h-96c-26.5 0-48-21.5-48-48v-96c0-1.7.1-3.4.3-5L144 224H48c-26.5 0-48-21.5-48-48V80z"/></svg></span> Pipeline</label><label for="__tabbed_1_2"><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20 4v16H4V4h16m2-2H2v20h20V2M12 6c-3.31 0-6 2.69-6 6s2.69 6 6 6 6-2.69 6-6-2.69-6-6-6Z"/></svg></span> Process</label><label for="__tabbed_1_3"><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M11.76 16.83 14.59 14l-2.83-2.83 1.41-1.41L16 12.59l2.83-2.83 1.41 1.41L17.41 14l2.83 2.83-1.41 1.41L16 15.41l-2.83 2.83-1.41-1.41M2 11h3l2.29 5.4L10 6h12v2H11.55L8.68 19H6.22l-2.54-6H2v-2Z"/></svg></span> Functions</label></div>
<div class="tabbed-content">
<div class="tabbed-block">
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<p>We love stars as much as we love rockets! So make sure you <a href="https://github.com/askimed/nf-test">star us on GitHub</a>.</p>
<!-- Place this tag where you want the button to render. -->
<p><a class="github-button" href="https://github.com/askimed/nf-test" data-icon="octicon-star" data-size="large" data-show-count="true" aria-label="Star askimed/nf-test on GitHub">Star</a></p>
<p>Show the world your Nextflow pipeline is using nf-test and at the following badge to your <code>REAMDE.md</code>:</p>
<p>Show the world your Nextflow pipeline is using nf-test and add the following badge to your <code>README.md</code>:</p>
<p><a href="https://code.askimed.com/nf-test"><img alt="nf-test" src="https://img.shields.io/badge/tested_with-nf--test-337ab7.svg" /></a></p>
<div class="highlight"><pre><span></span><code>[![nf-test](https://img.shields.io/badge/tested_with-nf--test-337ab7.svg)](https://code.askimed.com/nf-test)
</code></pre></div>
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