This repo contains the code and files used for the BCB420 Course
The purpose of this project was to do gene analysis on the dataset from GEO for paper Human Telomerase RNA Processing and Quality Control
To see the full analysis including the R code, plots and statistics go to this link
https://tsmnbx.github.io/BCB420-Gene-Analysis-Human-Telomerase-Rna-Processing-and-Quality-Control/
The files A1t.Rmd, A2t.Rmd and A3.Rmd contian the code used for the data analysis
A1t.Rmd was for Data Processing
A2t.Rmd was for Differential Gene Expression Analysis
A3.Rmd was for Pathway and Network Analysis
Using Kniter these Rmd files were used to create their respective HTML files
Here is a link to the course wiki
https://github.com/bcb420-2020/student_joshua/wiki
Here is the github repo for the webistie I created with the HTML files
https://github.com/Tsmnbx/BCB420-Gene-Analysis-Human-Telomerase-Rna-Processing-and-Quality-Control