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config.yaml
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config.yaml
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seed_everything: null
trainer:
logger: true
checkpoint_callback: true
enable_checkpointing: true
callbacks: null
default_root_dir: null
gradient_clip_val: null
gradient_clip_algorithm: null
process_position: 0
num_nodes: 1
num_processes: 1
devices: null
gpus: -1
auto_select_gpus: false
tpu_cores: null
ipus: null
log_gpu_memory: null
progress_bar_refresh_rate: null
enable_progress_bar: true
overfit_batches: 0.0
track_grad_norm: -1
check_val_every_n_epoch: 10
fast_dev_run: false
accumulate_grad_batches: null
max_epochs: 50
min_epochs: null
max_steps: -1
min_steps: null
max_time: null
limit_train_batches: 1.0
limit_val_batches: 1.0
limit_test_batches: 1.0
limit_predict_batches: 1.0
val_check_interval: 1.0
flush_logs_every_n_steps: null
log_every_n_steps: 10
accelerator: ddp
strategy: null
sync_batchnorm: false
precision: 32
enable_model_summary: true
weights_summary: top
weights_save_path: null
num_sanity_val_steps: 0
resume_from_checkpoint: null
profiler: simple
benchmark: false
deterministic: false
reload_dataloaders_every_n_epochs: 0
reload_dataloaders_every_epoch: false
auto_lr_find: false
replace_sampler_ddp: true
detect_anomaly: false
auto_scale_batch_size: false
prepare_data_per_node: null
plugins: null
amp_backend: native
amp_level: null
move_metrics_to_cpu: false
multiple_trainloader_mode: max_size_cycle
stochastic_weight_avg: false
terminate_on_nan: true
no_wandb: false
notes: null
early_stopping_patience: null
ckpt_path: null
model:
class_path: src.models.models.CNNToTransformerClassifier
init_args:
num_attention_heads: 4
num_hidden_layers: 4
kernel_sizes:
- 5
- 3
- 1
out_channels:
- 256
- 128
- 64
stride_sizes:
- 2
- 2
- 2
dropout_rate: 0.3
num_labels: 2
positional_encoding: false
bootstrap_val_metrics: true
warmup_steps: 0
data:
class_path: src.models.tasks.PredictFluPos
init_args:
fields:
- heart_rate
- missing_heart_rate
- missing_steps
- sleep_classic_0
- sleep_classic_1
- sleep_classic_2
- sleep_classic_3
- steps
activity_level: minute
window_onset_max: 0
window_onset_min: 0
train_path: /homes/gws/mikeam/MobileSensingSuite/data/debug/petastorm_datasets/debug
val_path: /homes/gws/mikeam/MobileSensingSuite/data/debug/petastorm_datasets/debug
test_path: null
downsample_negative_frac: null
shape: null
normalize_numerical: true
append_daily_features: false
daily_features_path: null
backend: petastorm
batch_size: 800