pretrain_dataloader.py

# Copyright 2022 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
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"""Loads dataset for the BERT pretraining task."""
from typing import Mapping, Optional

from absl import logging

import dataclasses
import numpy as np
import tensorflow as tf
from official.core import config_definitions as cfg
from official.core import input_reader
from official.nlp.data import data_loader
from official.nlp.data import data_loader_factory


@dataclasses.dataclass
class BertPretrainDataConfig(cfg.DataConfig):
  """Data config for BERT pretraining task (tasks/masked_lm)."""
  input_path: str = ''
  global_batch_size: int = 512
  is_training: bool = True
  seq_length: int = 512
  max_predictions_per_seq: int = 76
  use_next_sentence_label: bool = True
  use_position_id: bool = False
  # Historically, BERT implementations take `input_ids` and `segment_ids` as
  # feature names. Inside the TF Model Garden implementation, the Keras model
  # inputs are set as `input_word_ids` and `input_type_ids`. When
  # v2_feature_names is True, the data loader assumes the tf.Examples use
  # `input_word_ids` and `input_type_ids` as keys.
  use_v2_feature_names: bool = False


@data_loader_factory.register_data_loader_cls(BertPretrainDataConfig)
class BertPretrainDataLoader(data_loader.DataLoader):
  """A class to load dataset for bert pretraining task."""

  def __init__(self, params):
    """Inits `BertPretrainDataLoader` class.

    Args:
      params: A `BertPretrainDataConfig` object.
    """
    self._params = params
    self._seq_length = params.seq_length
    self._max_predictions_per_seq = params.max_predictions_per_seq
    self._use_next_sentence_label = params.use_next_sentence_label
    self._use_position_id = params.use_position_id

  def _name_to_features(self):
    name_to_features = {
        'input_mask':
            tf.io.FixedLenFeature([self._seq_length], tf.int64),
        'masked_lm_positions':
            tf.io.FixedLenFeature([self._max_predictions_per_seq], tf.int64),
        'masked_lm_ids':
            tf.io.FixedLenFeature([self._max_predictions_per_seq], tf.int64),
        'masked_lm_weights':
            tf.io.FixedLenFeature([self._max_predictions_per_seq], tf.float32),
    }
    if self._params.use_v2_feature_names:
      name_to_features.update({
          'input_word_ids': tf.io.FixedLenFeature([self._seq_length], tf.int64),
          'input_type_ids': tf.io.FixedLenFeature([self._seq_length], tf.int64),
      })
    else:
      name_to_features.update({
          'input_ids': tf.io.FixedLenFeature([self._seq_length], tf.int64),
          'segment_ids': tf.io.FixedLenFeature([self._seq_length], tf.int64),
      })
    if self._use_next_sentence_label:
      name_to_features['next_sentence_labels'] = tf.io.FixedLenFeature([1],
                                                                       tf.int64)
    if self._use_position_id:
      name_to_features['position_ids'] = tf.io.FixedLenFeature(
          [self._seq_length], tf.int64)
    return name_to_features

  def _decode(self, record: tf.Tensor):
    """Decodes a serialized tf.Example."""
    name_to_features = self._name_to_features()
    example = tf.io.parse_single_example(record, name_to_features)

    # tf.Example only supports tf.int64, but the TPU only supports tf.int32.
    # So cast all int64 to int32.
    for name in list(example.keys()):
      t = example[name]
      if t.dtype == tf.int64:
        t = tf.cast(t, tf.int32)
      example[name] = t

    return example

  def _parse(self, record: Mapping[str, tf.Tensor]):
    """Parses raw tensors into a dict of tensors to be consumed by the model."""
    x = {
        'input_mask': record['input_mask'],
        'masked_lm_positions': record['masked_lm_positions'],
        'masked_lm_ids': record['masked_lm_ids'],
        'masked_lm_weights': record['masked_lm_weights'],
    }
    if self._params.use_v2_feature_names:
      x['input_word_ids'] = record['input_word_ids']
      x['input_type_ids'] = record['input_type_ids']
    else:
      x['input_word_ids'] = record['input_ids']
      x['input_type_ids'] = record['segment_ids']
    if self._use_next_sentence_label:
      x['next_sentence_labels'] = record['next_sentence_labels']
    if self._use_position_id:
      x['position_ids'] = record['position_ids']

    return x

  def load(self, input_context: Optional[tf.distribute.InputContext] = None):
    """Returns a tf.dataset.Dataset."""
    reader = input_reader.InputReader(
        params=self._params, decoder_fn=self._decode, parser_fn=self._parse)
    return reader.read(input_context)


@dataclasses.dataclass
class XLNetPretrainDataConfig(cfg.DataConfig):
  """Data config for XLNet pretraining task.

  Attributes:
    input_path: See base class.
    global_batch_size: See base calss.
    is_training: See base class.
    seq_length: The length of each sequence.
    max_predictions_per_seq: The number of predictions per sequence.
    reuse_length: The number of tokens in a previous segment to reuse. This
      should be the same value used during pretrain data creation.
    sample_strategy: The strategy used to sample factorization permutations.
      Possible values: 'single_token', 'whole_word', 'token_span', 'word_span'.
    min_num_tokens: The minimum number of tokens to sample in a span.
      This is used when `sample_strategy` is 'token_span'.
    max_num_tokens: The maximum number of tokens to sample in a span.
      This is used when `sample_strategy` is 'token_span'.
    min_num_words: The minimum number of words to sample in a span.
      This is used when `sample_strategy` is 'word_span'.
    max_num_words: The maximum number of words to sample in a span.
      This is used when `sample_strategy` is 'word_span'.
    permutation_size: The length of the longest permutation. This can be set
      to `reuse_length`. This should NOT be greater than `reuse_length`,
      otherwise this may introduce data leaks.
    leak_ratio: The percentage of masked tokens that are leaked.
    segment_sep_id: The ID of the SEP token used when preprocessing
      the dataset.
    segment_cls_id: The ID of the CLS token used when preprocessing
      the dataset.

  """
  input_path: str = ''
  global_batch_size: int = 512
  is_training: bool = True
  seq_length: int = 512
  max_predictions_per_seq: int = 76
  reuse_length: int = 256
  sample_strategy: str = 'word_span'
  min_num_tokens: int = 1
  max_num_tokens: int = 5
  min_num_words: int = 1
  max_num_words: int = 5
  permutation_size: int = 256
  leak_ratio: float = 0.1
  segment_sep_id: int = 4
  segment_cls_id: int = 3


@data_loader_factory.register_data_loader_cls(XLNetPretrainDataConfig)
class XLNetPretrainDataLoader(data_loader.DataLoader):
  """A class to load dataset for xlnet pretraining task."""

  def __init__(self, params: XLNetPretrainDataConfig):
    """Inits `XLNetPretrainDataLoader` class.

    Args:
      params: A `XLNetPretrainDataConfig` object.
    """
    self._params = params
    self._seq_length = params.seq_length
    self._max_predictions_per_seq = params.max_predictions_per_seq
    self._reuse_length = params.reuse_length
    self._num_replicas_in_sync = None
    self._permutation_size = params.permutation_size
    self._sep_id = params.segment_sep_id
    self._cls_id = params.segment_cls_id
    self._sample_strategy = params.sample_strategy
    self._leak_ratio = params.leak_ratio

  def _decode(self, record: tf.Tensor):
    """Decodes a serialized tf.Example."""
    name_to_features = {
        'input_word_ids':
            tf.io.FixedLenFeature([self._seq_length], tf.int64),
        'input_type_ids':
            tf.io.FixedLenFeature([self._seq_length], tf.int64),
        'boundary_indices':
            tf.io.VarLenFeature(tf.int64),
    }
    example = tf.io.parse_single_example(record, name_to_features)

    # tf.Example only supports tf.int64, but the TPU only supports tf.int32.
    # So cast all int64 to int32.
    for name in list(example.keys()):
      t = example[name]
      if t.dtype == tf.int64:
        t = tf.cast(t, tf.int32)
      example[name] = t

    return example

  def _parse(self, record: Mapping[str, tf.Tensor]):
    """Parses raw tensors into a dict of tensors to be consumed by the model."""
    x = {}

    inputs = record['input_word_ids']
    x['input_type_ids'] = record['input_type_ids']

    if self._sample_strategy in ['whole_word', 'word_span']:
      boundary = tf.sparse.to_dense(record['boundary_indices'])
    else:
      boundary = None

    input_mask = self._online_sample_mask(inputs=inputs, boundary=boundary)

    if self._reuse_length > 0:
      if self._permutation_size > self._reuse_length:
        logging.warning(
            '`permutation_size` is greater than `reuse_length` (%d > %d).'
            'This may introduce data leakage.',
            self._permutation_size, self._reuse_length)

      # Enable the memory mechanism.
      # Permute the reuse and non-reuse segments separately.
      non_reuse_len = self._seq_length - self._reuse_length
      if not (self._reuse_length % self._permutation_size == 0
              and non_reuse_len % self._permutation_size == 0):
        raise ValueError('`reuse_length` and `seq_length` should both be '
                         'a multiple of `permutation_size`.')

      # Creates permutation mask and target mask for the first reuse_len tokens.
      # The tokens in this part are reused from the last sequence.
      perm_mask_0, target_mask_0, tokens_0, masked_0 = self._get_factorization(
          inputs=inputs[:self._reuse_length],
          input_mask=input_mask[:self._reuse_length])

      # Creates permutation mask and target mask for the rest of tokens in
      # current example, which are concatentation of two new segments.
      perm_mask_1, target_mask_1, tokens_1, masked_1 = self._get_factorization(
          inputs[self._reuse_length:], input_mask[self._reuse_length:])

      perm_mask_0 = tf.concat(
          [perm_mask_0,
           tf.zeros([self._reuse_length, non_reuse_len], dtype=tf.int32)],
          axis=1)
      perm_mask_1 = tf.concat(
          [tf.ones([non_reuse_len, self._reuse_length], dtype=tf.int32),
           perm_mask_1], axis=1)
      perm_mask = tf.concat([perm_mask_0, perm_mask_1], axis=0)
      target_mask = tf.concat([target_mask_0, target_mask_1], axis=0)
      tokens = tf.concat([tokens_0, tokens_1], axis=0)
      masked_tokens = tf.concat([masked_0, masked_1], axis=0)
    else:
      # Disable the memory mechanism.
      if self._seq_length % self._permutation_size != 0:
        raise ValueError('`seq_length` should be a multiple of '
                         '`permutation_size`.')
      # Permute the entire sequence together
      perm_mask, target_mask, tokens, masked_tokens = self._get_factorization(
          inputs=inputs, input_mask=input_mask)
    x['permutation_mask'] = tf.reshape(
        perm_mask, [self._seq_length, self._seq_length])
    x['input_word_ids'] = tokens
    x['masked_tokens'] = masked_tokens

    target = tokens
    if self._max_predictions_per_seq is not None:
      indices = tf.range(self._seq_length, dtype=tf.int32)
      bool_target_mask = tf.cast(target_mask, tf.bool)
      indices = tf.boolean_mask(indices, bool_target_mask)

      # account for extra padding due to CLS/SEP.
      actual_num_predict = tf.shape(indices)[0]
      pad_len = self._max_predictions_per_seq - actual_num_predict

      target_mapping = tf.one_hot(indices, self._seq_length, dtype=tf.int32)
      paddings = tf.zeros([pad_len, self._seq_length],
                          dtype=target_mapping.dtype)
      target_mapping = tf.concat([target_mapping, paddings], axis=0)
      x['target_mapping'] = tf.reshape(
          target_mapping, [self._max_predictions_per_seq, self._seq_length])

      target = tf.boolean_mask(target, bool_target_mask)
      paddings = tf.zeros([pad_len], dtype=target.dtype)
      target = tf.concat([target, paddings], axis=0)
      x['target'] = tf.reshape(target, [self._max_predictions_per_seq])

      target_mask = tf.concat([
          tf.ones([actual_num_predict], dtype=tf.int32),
          tf.zeros([pad_len], dtype=tf.int32)
      ], axis=0)
      x['target_mask'] = tf.reshape(target_mask,
                                    [self._max_predictions_per_seq])
    else:
      x['target'] = tf.reshape(target, [self._seq_length])
      x['target_mask'] = tf.reshape(target_mask, [self._seq_length])
    return x

  def _index_pair_to_mask(self,
                          begin_indices: tf.Tensor,
                          end_indices: tf.Tensor,
                          inputs: tf.Tensor) -> tf.Tensor:
    """Converts beginning and end indices into an actual mask."""
    non_func_mask = tf.logical_and(
        tf.not_equal(inputs, self._sep_id), tf.not_equal(inputs, self._cls_id))
    all_indices = tf.where(
        non_func_mask,
        tf.range(self._seq_length, dtype=tf.int32),
        tf.constant(-1, shape=[self._seq_length], dtype=tf.int32))
    candidate_matrix = tf.cast(
        tf.logical_and(all_indices[None, :] >= begin_indices[:, None],
                       all_indices[None, :] < end_indices[:, None]), tf.float32)
    cumsum_matrix = tf.reshape(
        tf.cumsum(tf.reshape(candidate_matrix, [-1])), [-1, self._seq_length])
    masked_matrix = tf.cast(cumsum_matrix <= self._max_predictions_per_seq,
                            tf.float32)
    target_mask = tf.reduce_sum(candidate_matrix * masked_matrix, axis=0)
    return tf.cast(target_mask, tf.bool)

  def _single_token_mask(self, inputs: tf.Tensor) -> tf.Tensor:
    """Samples individual tokens as prediction targets."""
    all_indices = tf.range(self._seq_length, dtype=tf.int32)
    non_func_mask = tf.logical_and(
        tf.not_equal(inputs, self._sep_id), tf.not_equal(inputs, self._cls_id))
    non_func_indices = tf.boolean_mask(all_indices, non_func_mask)

    masked_pos = tf.random.shuffle(non_func_indices)
    masked_pos = tf.sort(masked_pos[:self._max_predictions_per_seq])

    sparse_indices = tf.stack(
        [tf.zeros_like(masked_pos), masked_pos], axis=-1)
    sparse_indices = tf.cast(sparse_indices, tf.int64)

    sparse_indices = tf.sparse.SparseTensor(
        sparse_indices,
        values=tf.ones_like(masked_pos),
        dense_shape=(1, self._seq_length))

    target_mask = tf.sparse.to_dense(
        sp_input=sparse_indices,
        default_value=0)

    return tf.squeeze(tf.cast(target_mask, tf.bool))

  def _whole_word_mask(self,
                       inputs: tf.Tensor,
                       boundary: tf.Tensor) -> tf.Tensor:
    """Samples whole words as prediction targets."""
    pair_indices = tf.concat([boundary[:-1, None], boundary[1:, None]], axis=1)
    cand_pair_indices = tf.random.shuffle(
        pair_indices)[:self._max_predictions_per_seq]
    begin_indices = cand_pair_indices[:, 0]
    end_indices = cand_pair_indices[:, 1]

    return self._index_pair_to_mask(
        begin_indices=begin_indices,
        end_indices=end_indices,
        inputs=inputs)

  def _token_span_mask(self, inputs: tf.Tensor) -> tf.Tensor:
    """Samples token spans as prediction targets."""
    min_num_tokens = self._params.min_num_tokens
    max_num_tokens = self._params.max_num_tokens

    mask_alpha = self._seq_length / self._max_predictions_per_seq
    round_to_int = lambda x: tf.cast(tf.round(x), tf.int32)

    # Sample span lengths from a zipf distribution
    span_len_seq = np.arange(min_num_tokens, max_num_tokens + 1)
    probs = np.array([1.0 / (i + 1) for i in span_len_seq])

    probs /= np.sum(probs)
    logits = tf.constant(np.log(probs), dtype=tf.float32)
    span_lens = tf.random.categorical(
        logits=logits[None],
        num_samples=self._max_predictions_per_seq,
        dtype=tf.int32,
    )[0] + min_num_tokens

    # Sample the ratio [0.0, 1.0) of left context lengths
    span_lens_float = tf.cast(span_lens, tf.float32)
    left_ratio = tf.random.uniform(
        shape=[self._max_predictions_per_seq], minval=0.0, maxval=1.0)
    left_ctx_len = left_ratio * span_lens_float * (mask_alpha - 1)
    left_ctx_len = round_to_int(left_ctx_len)

    # Compute the offset from left start to the right end
    right_offset = round_to_int(span_lens_float * mask_alpha) - left_ctx_len

    # Get the actual begin and end indices
    begin_indices = (
        tf.cumsum(left_ctx_len) + tf.cumsum(right_offset, exclusive=True))
    end_indices = begin_indices + span_lens

    # Remove out of range indices
    valid_idx_mask = end_indices < self._seq_length
    begin_indices = tf.boolean_mask(begin_indices, valid_idx_mask)
    end_indices = tf.boolean_mask(end_indices, valid_idx_mask)

    # Shuffle valid indices
    num_valid = tf.cast(tf.shape(begin_indices)[0], tf.int32)
    order = tf.random.shuffle(tf.range(num_valid, dtype=tf.int32))
    begin_indices = tf.gather(begin_indices, order)
    end_indices = tf.gather(end_indices, order)

    return self._index_pair_to_mask(
        begin_indices=begin_indices,
        end_indices=end_indices,
        inputs=inputs)

  def _word_span_mask(self,
                      inputs: tf.Tensor,
                      boundary: tf.Tensor):
    """Sample whole word spans as prediction targets."""
    min_num_words = self._params.min_num_words
    max_num_words = self._params.max_num_words

    # Note: 1.2 is the token-to-word ratio
    mask_alpha = self._seq_length / self._max_predictions_per_seq / 1.2
    round_to_int = lambda x: tf.cast(tf.round(x), tf.int32)

    # Sample span lengths from a zipf distribution
    span_len_seq = np.arange(min_num_words, max_num_words + 1)
    probs = np.array([1.0 / (i + 1) for i in span_len_seq])
    probs /= np.sum(probs)
    logits = tf.constant(np.log(probs), dtype=tf.float32)

    # Sample `num_predict` words here: note that this is over sampling
    span_lens = tf.random.categorical(
        logits=logits[None],
        num_samples=self._max_predictions_per_seq,
        dtype=tf.int32,
    )[0] + min_num_words

    # Sample the ratio [0.0, 1.0) of left context lengths
    span_lens_float = tf.cast(span_lens, tf.float32)
    left_ratio = tf.random.uniform(
        shape=[self._max_predictions_per_seq], minval=0.0, maxval=1.0)
    left_ctx_len = left_ratio * span_lens_float * (mask_alpha - 1)

    left_ctx_len = round_to_int(left_ctx_len)
    right_offset = round_to_int(span_lens_float * mask_alpha) - left_ctx_len

    begin_indices = (
        tf.cumsum(left_ctx_len) + tf.cumsum(right_offset, exclusive=True))
    end_indices = begin_indices + span_lens

    # Remove out of range indices
    max_boundary_index = tf.cast(tf.shape(boundary)[0] - 1, tf.int32)
    valid_idx_mask = end_indices < max_boundary_index
    begin_indices = tf.boolean_mask(begin_indices, valid_idx_mask)
    end_indices = tf.boolean_mask(end_indices, valid_idx_mask)

    begin_indices = tf.gather(boundary, begin_indices)
    end_indices = tf.gather(boundary, end_indices)

    # Shuffle valid indices
    num_valid = tf.cast(tf.shape(begin_indices)[0], tf.int32)
    order = tf.random.shuffle(tf.range(num_valid, dtype=tf.int32))
    begin_indices = tf.gather(begin_indices, order)
    end_indices = tf.gather(end_indices, order)

    return self._index_pair_to_mask(
        begin_indices=begin_indices,
        end_indices=end_indices,
        inputs=inputs)

  def _online_sample_mask(self,
                          inputs: tf.Tensor,
                          boundary: tf.Tensor) -> tf.Tensor:
    """Samples target positions for predictions.

    Descriptions of each strategy:
      - 'single_token': Samples individual tokens as prediction targets.
      - 'token_span': Samples spans of tokens as prediction targets.
      - 'whole_word': Samples individual words as prediction targets.
      - 'word_span': Samples spans of words as prediction targets.

    Args:
      inputs: The input tokens.
      boundary: The `int` Tensor of indices indicating whole word boundaries.
        This is used in 'whole_word' and 'word_span'

    Returns:
      The sampled `bool` input mask.

    Raises:
      `ValueError`: if `max_predictions_per_seq` is not set or if boundary is
        not provided for 'whole_word' and 'word_span' sample strategies.
    """
    if self._max_predictions_per_seq is None:
      raise ValueError('`max_predictions_per_seq` must be set.')

    if boundary is None and 'word' in self._sample_strategy:
      raise ValueError('`boundary` must be provided for {} strategy'.format(
          self._sample_strategy))

    if self._sample_strategy == 'single_token':
      return self._single_token_mask(inputs)
    elif self._sample_strategy == 'token_span':
      return self._token_span_mask(inputs)
    elif self._sample_strategy == 'whole_word':
      return self._whole_word_mask(inputs, boundary)
    elif self._sample_strategy == 'word_span':
      return self._word_span_mask(inputs, boundary)
    else:
      raise NotImplementedError('Invalid sample strategy.')

  def _get_factorization(self,
                         inputs: tf.Tensor,
                         input_mask: tf.Tensor):
    """Samples a permutation of the factorization order.

    Args:
      inputs: the input tokens.
      input_mask: the `bool` Tensor of the same shape as `inputs`.
        If `True`, then this means select for partial prediction.

    Returns:
      perm_mask: An `int32` Tensor of shape [seq_length, seq_length] consisting
        of 0s and 1s. If perm_mask[i][j] == 0, then this means that the i-th
        token (in original order) cannot attend to the jth attention token.
      target_mask: An `int32` Tensor of shape [seq_len] consisting of 0s and 1s.
        If target_mask[i] == 1, then the i-th token needs to be predicted and
        the mask will be used as input. This token will be included in the loss.
        If target_mask[i] == 0, then the token (or [SEP], [CLS]) will be used as
        input. This token will not be included in the loss.
      tokens: int32 Tensor of shape [seq_length].
      masked_tokens: int32 Tensor of shape [seq_length].

    """
    factorization_length = tf.shape(inputs)[0]
    # Generate permutation indices
    index = tf.range(factorization_length, dtype=tf.int32)
    index = tf.transpose(tf.reshape(index, [-1, self._permutation_size]))
    index = tf.random.shuffle(index)
    index = tf.reshape(tf.transpose(index), [-1])

    input_mask = tf.cast(input_mask, tf.bool)

    # non-functional tokens
    non_func_tokens = tf.logical_not(
        tf.logical_or(
            tf.equal(inputs, self._sep_id), tf.equal(inputs, self._cls_id)))
    masked_tokens = tf.logical_and(input_mask, non_func_tokens)
    non_masked_or_func_tokens = tf.logical_not(masked_tokens)

    smallest_index = -2 * tf.ones([factorization_length], dtype=tf.int32)

    # Similar to BERT, randomly leak some masked tokens
    if self._leak_ratio > 0:
      leak_tokens = tf.logical_and(
          masked_tokens,
          tf.random.uniform([factorization_length],
                            maxval=1.0) < self._leak_ratio)
      can_attend_self = tf.logical_or(non_masked_or_func_tokens, leak_tokens)
    else:
      can_attend_self = non_masked_or_func_tokens
    to_index = tf.where(can_attend_self, smallest_index, index)
    from_index = tf.where(can_attend_self, to_index + 1, to_index)

    # For masked tokens, can attend if i > j
    # For context tokens, always can attend each other
    can_attend = from_index[:, None] > to_index[None, :]

    perm_mask = tf.cast(can_attend, tf.int32)

    # Only masked tokens are included in the loss
    target_mask = tf.cast(masked_tokens, tf.int32)

    return perm_mask, target_mask, inputs, masked_tokens

  def load(self, input_context: Optional[tf.distribute.InputContext] = None):
    """Returns a tf.dataset.Dataset."""
    if input_context:
      self._num_replicas_in_sync = input_context.num_replicas_in_sync
    reader = input_reader.InputReader(
        params=self._params, decoder_fn=self._decode, parser_fn=self._parse)
    return reader.read(input_context)