diff --git a/CHANGES.txt b/CHANGES.txt index ec9aa2d..fa5f0b0 100644 --- a/CHANGES.txt +++ b/CHANGES.txt @@ -1,3 +1,8 @@ + +v1.4.2 +---------------- +use pyasp-1.3.3 + v1.4.1 ---------------- use pyasp-1.3.1 diff --git a/README b/README index 761cfc4..891ab73 100644 --- a/README +++ b/README @@ -12,7 +12,7 @@ Usage Typical usage is:: $ shogen.py [options] genomefile metabolismfile catalysationfile queries - + Options: -h, --help show this help message and exit -k K, --k=K Number of ranked shortest genome segments (Default to 5) diff --git a/shogen.py b/shogen.py index 2e58d17..f8adf3c 100644 --- a/shogen.py +++ b/shogen.py @@ -54,7 +54,7 @@ print "done." inst=instance.to_file() - instance.to_file("inst.lp") + #instance.to_file("inst.lp") print "create instance ...", ksip_instance = query.get_ksip_instance(inst,length) print "done.",len(ksip_instance)