PR-arm.yml

name: PR (osx-arm64)
on:
  pull_request:
    types: [opened, synchronize, reopened]
concurrency:
  group: build-${{ github.event.pull_request.number || github.head_ref }}
  cancel-in-progress: true
jobs:
  build_and_test-osx-arm64:
    name: build_and_test-osx-arm64
    runs-on: macOS-14 # M1
    strategy:
      fail-fast: true
      max-parallel: 13
    steps:
      - uses: actions/checkout@v4
        with:
          fetch-depth: 0

      # bail if there's no osx-arm64 recipes
      - name: Check for Additional Platforms
        id: additional_platforms
        run: |
          result=$(./scripts/check-for-additional-platforms.sh "origin/master...HEAD" "build_and_test" "${GITHUB_JOB}")
          if [[ ${result} != "build" ]]
          then
              echo "No recipes using this platform, skipping rest of job."
              echo "skip_build=true" >> $GITHUB_OUTPUT
          fi

      - name: set path
        run: echo "/opt/mambaforge/bin" >> $GITHUB_PATH

      - name: Fetch conda install script
        if: steps.additional_platforms.outputs.skip_build != 'true'
        run: |
          wget https://raw.githubusercontent.com/bioconda/bioconda-common/master/{install-and-set-up-conda,configure-conda,common}.sh

      - name: Set up bioconda-utils
        if: steps.additional_platforms.outputs.skip_build != 'true'
        run: bash install-and-set-up-conda.sh

      - name: Configure conda
        if: steps.additional_platforms.outputs.skip_build != 'true'
        run: bash configure-conda.sh

      - name: Build and Test
        if: steps.additional_platforms.outputs.skip_build != 'true'
        env:
          # Mimic circleci
          OSTYPE: "darwin"
          CI: "true"
        run: |
          set -e
          eval "$(conda shell.bash hook)"
          conda activate bioconda
          source common.sh

          if [ -z "$GITHUB_BASE_REF" ] ; then
              export GITHUB_BASE_REF="master"
          fi
          git fetch origin "$GITHUB_BASE_REF"

          bioconda-utils build recipes config.yml \
            --lint --git-range origin/"$GITHUB_BASE_REF" HEAD

      - name: Prepare artifacts
        if: steps.additional_platforms.outputs.skip_build != 'true'
        run: |
              (
              rm -rf /tmp/artifacts
              mkdir -p /tmp/artifacts/packages
              cd /opt/mambaforge/envs/bioconda/conda-bld || exit 0
              find -name .cache | xargs rm -rf || true
              for n in index.html channeldata.json osx-arm64 noarch; do
                cp -rv $n /tmp/artifacts/packages || true
              done
              ) || true

      - name: Archive packages
        if: steps.additional_platforms.outputs.skip_build != 'true'
        uses: actions/upload-artifact@v4
        with:
          name: osx-arm64-packages
          path: |
            /tmp/artifacts