diff --git a/recipes/pywgsim/build_failure.linux-64.yaml b/recipes/pywgsim/build_failure.linux-64.yaml deleted file mode 100644 index 2db726c5cbc65..0000000000000 --- a/recipes/pywgsim/build_failure.linux-64.yaml +++ /dev/null @@ -1,105 +0,0 @@ -recipe_sha: 8d9e5e59c6ea28dd0859351ab4bad2461cbb730265c8d7c93e8d94a561080586 # The hash of the recipe's meta.yaml at which this recipe failed to build. -skiplist: true # Set to true to skiplist this recipe so that it will be ignored as long as its latest commit is the one given above. -category: compiler error -log: |2- - reading manifest template 'MANIFEST.in' - writing manifest file 'pywgsim.egg-info/SOURCES.txt' - copying pywgsim/wgsim_lib.c -> build/lib.linux-x86_64-cpython-38/pywgsim - copying pywgsim/wgsim_lib.pyx -> build/lib.linux-x86_64-cpython-38/pywgsim - creating build/lib.linux-x86_64-cpython-38/pywgsim/src - copying pywgsim/src/Makefile -> build/lib.linux-x86_64-cpython-38/pywgsim/src - copying pywgsim/src/kseq.h -> build/lib.linux-x86_64-cpython-38/pywgsim/src - copying pywgsim/src/wgsim_mod.c -> build/lib.linux-x86_64-cpython-38/pywgsim/src - copying pywgsim/src/wgsim_mod.h -> build/lib.linux-x86_64-cpython-38/pywgsim/src - running build_ext - building 'pywgsim.wgsim' extension - creating build/temp.linux-x86_64-cpython-38 - creating build/temp.linux-x86_64-cpython-38/pywgsim - creating build/temp.linux-x86_64-cpython-38/pywgsim/src - /opt/conda/conda-bld/pywgsim_1718134883721/_build_env/bin/x86_64-conda-linux-gnu-cc -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /opt/conda/conda-bld/pywgsim_1718134883721/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/include -fPIC -O2 -isystem /opt/conda/conda-bld/pywgsim_1718134883721/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/include -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /opt/conda/conda-bld/pywgsim_1718134883721/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/include -fdebug-prefix-map=/opt/conda/conda-bld/pywgsim_1718134883721/work=/usr/local/src/conda/pywgsim-0.5.2 -fdebug-prefix-map=/opt/conda/conda-bld/pywgsim_1718134883721/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place=/usr/local/src/conda-prefix -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /opt/conda/conda-bld/pywgsim_1718134883721/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/include -fPIC -Ipywgsim/src -I/opt/conda/conda-bld/pywgsim_1718134883721/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/include/python3.8 -c pywgsim/src/wgsim_mod.c -o build/temp.linux-x86_64-cpython-38/pywgsim/src/wgsim_mod.o - pywgsim/src/wgsim_mod.c:39:10: fatal error: zlib.h: No such file or directory - 39 | #include - | ^~~~~~~~ - compilation terminated. - /opt/conda/conda-bld/pywgsim_1718134883721/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/lib/python3.8/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'pywgsim.src' is absent from the packages configuration. - !! - - ******************************************************************************** - ############################ - # Package would be ignored # - ############################ - Python recognizes 'pywgsim.src' as an importable package[^1], - but it is absent from setuptools' packages configuration. - - This leads to an ambiguous overall configuration. If you want to distribute this - package, please make sure that 'pywgsim.src' is explicitly added - to the packages configuration field. - - Alternatively, you can also rely on setuptools' discovery methods - (for example by using find_namespace_packages(...)/find_namespace: - instead of find_packages(...)/find:). - - You can read more about "package discovery" on setuptools documentation page: - - - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html - - If you don't want 'pywgsim.src' to be distributed and are - already explicitly excluding 'pywgsim.src' via - find_namespace_packages(...)/find_namespace or find_packages(...)/find, - you can try to use exclude_package_data, or include-package-data=False in - combination with a more fine grained package-data configuration. - - You can read more about "package data files" on setuptools documentation page: - - - https://setuptools.pypa.io/en/latest/userguide/datafiles.html - - - [^1]: For Python, any directory (with suitable naming) can be imported, - even if it does not contain any .py files. - On the other hand, currently there is no concept of package data - directory, all directories are treated like packages. - ******************************************************************************** - - !! - check.warn(importable) - error: command '/opt/conda/conda-bld/pywgsim_1718134883721/_build_env/bin/x86_64-conda-linux-gnu-cc' failed with exit code 1 - [1;31merror[0m: [1msubprocess-exited-with-error[0m - - [31m[0m [32mBuilding wheel for pywgsim [0m[1;32m([0m[32mpyproject.toml[0m[1;32m)[0m did not run successfully. - [31m[0m exit code: [1;36m1[0m - [31m>[0m See above for output. - - [1;35mnote[0m: This error originates from a subprocess, and is likely not a problem with pip. - [1;35mfull command[0m: [34m/opt/conda/conda-bld/pywgsim_1718134883721/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/bin/python /opt/conda/conda-bld/pywgsim_1718134883721/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/lib/python3.8/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpdpqqbkrp[0m - [1;35mcwd[0m: /opt/conda/conda-bld/pywgsim_1718134883721/work - Building wheel for pywgsim (pyproject.toml): finished with status 'error' - [31m ERROR: Failed building wheel for pywgsim[0m[31m - [0mFailed to build pywgsim - [31mERROR: Could not build wheels for pywgsim, which is required to install pyproject.toml-based projects[0m[31m - [0mException information: - Traceback (most recent call last): - File "$PREFIX/lib/python3.8/site-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper - status = run_func(*args) - File "$PREFIX/lib/python3.8/site-packages/pip/_internal/cli/req_command.py", line 245, in wrapper - return func(self, options, args) - File "$PREFIX/lib/python3.8/site-packages/pip/_internal/commands/install.py", line 429, in run - raise InstallationError( - pip._internal.exceptions.InstallationError: Could not build wheels for pywgsim, which is required to install pyproject.toml-based projects - Removed build tracker: '/tmp/pip-build-tracker-nmdku6cp' - Traceback (most recent call last): - File "/opt/conda/bin/conda-build", line 11, in - sys.exit(execute()) - File "/opt/conda/lib/python3.10/site-packages/conda_build/cli/main_build.py", line 590, in execute - api.build( - File "/opt/conda/lib/python3.10/site-packages/conda_build/api.py", line 250, in build - return build_tree( - File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 3638, in build_tree - packages_from_this = build( - File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 2506, in build - utils.check_call_env( - File "/opt/conda/lib/python3.10/site-packages/conda_build/utils.py", line 405, in check_call_env - return _func_defaulting_env_to_os_environ("call", *popenargs, **kwargs) - File "/opt/conda/lib/python3.10/site-packages/conda_build/utils.py", line 381, in _func_defaulting_env_to_os_environ - raise subprocess.CalledProcessError(proc.returncode, _args) - subprocess.CalledProcessError: Command '['/bin/bash', '-o', 'errexit', '/opt/conda/conda-bld/pywgsim_1718134883721/work/conda_build.sh']' returned non-zero exit status 1. -# Last 100 lines of the build log.