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Bugs in the conda environment #25

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GloomyM opened this issue May 16, 2024 · 1 comment
Open

Bugs in the conda environment #25

GloomyM opened this issue May 16, 2024 · 1 comment

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@GloomyM
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GloomyM commented May 16, 2024

I have setup the environment based on these commands:
conda create -n mbo -c conda-forge rdkit
pip install design-bench==2.0.20

However, when I use the api I encounter a strange problem.
The import design_bench got an error:
ValueError: Can't find a vocabulary file at path '/root/miniconda3/envs/mbo/lib/python3.10/site-packages/design_bench_data/smiles_vocab.txt'. To load the vocabulary from a Google pretrained model use tokenizer = BertTokenizer.from_pretrained(PRETRAINED_MODEL_NAME)

@christopher-beckham
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christopher-beckham commented May 17, 2024

Hi,

This is an issue which has been resolved in a new branch (albeit pending approval), switch to branch chris/fixes-v2 and see if that helps. (For a bit more context, see #21)

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