assembly.assemble_spades: added option to drop contigs shorter than given length. #889
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tomkinsc
approved these changes
Oct 22, 2018
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Thanks! It may be helpful to also expose the option in the assembly task within tasks_assembly.wdl.
SPAdes is not yet the default in the WDL assembly workflow, but with this change perhaps it should be. (?)
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travis-ci seems in odd state -- usually there's a pointer to the build in progress. anyone seen this before / know the fix? |
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From their status page, it looks like there are problems between TravisCI and GitHub: |
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assembly.assemble_spades: added option to drop contigs shorter than given length (for #874)