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Annotated ligand-receptor pairs are not included in the data tables #4

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mumdark opened this issue Jan 13, 2025 · 2 comments
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@mumdark
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mumdark commented Jan 13, 2025

The manuscript describes: "scTenifoldXct detected S100A8-ITGB2 and CCL26-CCR6." However, it appears that these annotated ligand-receptor pairs are not included in the data tables provided on GitHub (https://github.com/cailab-tamu/scTenifoldXct/tree/main/scTenifoldXct/database).

Did I misunderstand something? Thank you for your response.

@jamesjcai
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@mumdark scTenifoldXct identifies ligand-receptor pairs that do not exist in databases. It is not dependent on prior knowledge.

@mumdark
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mumdark commented Jan 14, 2025

@mumdark scTenifoldXct identifies ligand-receptor pairs that do not exist in databases. It is not dependent on prior knowledge.

Your explanation was very helpful! Thanks!

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