.gitignore

## compiled source/environment ##
#################################
.DS_Store
*.egg-info
*.exe
.idea
.idea/*
*.pyc
__pycache__
.ipynb_checkpoints/*
build/*
dist/*
resources/analyses/.DS_Store
resources/analyses/.ipynb_checkpoints/*

## testing resources ##
#################################
*.mypy*
.coverage*
coverage.xml
.notipy.json
.single_run
.vscode/

## directories ##
#################################
releases/*
!resources/analyses/*.py
!resources/analyses/*.ipynb
resources/clinical_data*
!resources/clinical_data/README.md
resources/documentation
resources/mappings/
!resources/mappings/condition_codes/.gitkeep
!resources/mappings/laboratory_tests/.gitkeep
!resources/mappings/medication_codes/.gitkeep
!resources/mappings/source_code_vocab_map.csv
resources/mapping_semantics
!resources/mapping_semantics/*.md
resources/ontologies/
!resources/ontologies/ontology_source_metadata.txt
resources/programming/

## scripts ##
#################################
scratch.py