From 40a5e98cfcb2584e2e4f7bb1109fe674e3d66b6e Mon Sep 17 00:00:00 2001 From: Kevin Rue-Albrecht Date: Thu, 1 Aug 2024 15:12:05 +0100 Subject: [PATCH] fix download of imput data --- episodes/01-setup.Rmd | 6 +++--- episodes/download_data.R | 6 +++--- 2 files changed, 6 insertions(+), 6 deletions(-) diff --git a/episodes/01-setup.Rmd b/episodes/01-setup.Rmd index 9fd8f2a..378258e 100644 --- a/episodes/01-setup.Rmd +++ b/episodes/01-setup.Rmd @@ -59,15 +59,15 @@ download.file( ) download.file( url = "https://raw.githubusercontent.com/Bioconductor/bioconductor-teaching/devel/data/SummarizedExperiment/counts.csv", - destfile = "data/actb_orfs.fasta" + destfile = "data/counts.csv" ) download.file( url = "https://raw.githubusercontent.com/Bioconductor/bioconductor-teaching/devel/data/SummarizedExperiment/gene_metadata.csv", - destfile = "data/actb_orfs.fasta" + destfile = "data/gene_metadata.csv" ) download.file( url = "https://raw.githubusercontent.com/Bioconductor/bioconductor-teaching/devel/data/SummarizedExperiment/sample_metadata.csv", - destfile = "data/actb_orfs.fasta" + destfile = "data/sample_metadata.csv" ) ``` diff --git a/episodes/download_data.R b/episodes/download_data.R index 6f779a6..64d0748 100644 --- a/episodes/download_data.R +++ b/episodes/download_data.R @@ -14,13 +14,13 @@ download.file( ) download.file( url = "https://raw.githubusercontent.com/Bioconductor/bioconductor-teaching/devel/data/SummarizedExperiment/counts.csv", - destfile = "data/actb_orfs.fasta" + destfile = "data/counts.csv" ) download.file( url = "https://raw.githubusercontent.com/Bioconductor/bioconductor-teaching/devel/data/SummarizedExperiment/gene_metadata.csv", - destfile = "data/actb_orfs.fasta" + destfile = "data/gene_metadata.csv" ) download.file( url = "https://raw.githubusercontent.com/Bioconductor/bioconductor-teaching/devel/data/SummarizedExperiment/sample_metadata.csv", - destfile = "data/actb_orfs.fasta" + destfile = "data/sample_metadata.csv" )