DESCRIPTION

Package: CyCIFData
Title: Collection of public CyCIF datasets
Version: 0.99.3
Authors@R: 
    c(person("Ludwig", "Geistlinger", 
             role = c("aut", "cre"),
             email = "ludwig_geistlinger@hms.harvard.edu", 
             comment = c(ORCID = "0000-0002-2495-5464")),
      person("Tyrone", "Lee", role = "ctb"),
      person("Marcel", "Ramos", role = "ctb"),
      person("Robert", "Gentleman", role = "aut"))
Description: CyCIFData is an ExperimentHub package that serves publicly available
    datasets obtained with cyclic immunofluorescence (CyCIF). CyCIF is a highly
    multiplexed immuno-fluorescence imaging technology of formalin-fixed,
    paraffin-embedded (FFPE) specimens mounted on glass slides, the most widely
    used specimens for histopathological diagnosis of cancer and other diseases.
    CyCIF generates up to 60-plex images using an iterative process (a cycle) in
    which conventional low-plex fluorescence images are repeatedly collected from
    the same sample. The scope of the package is to provide CyCIF data for method
    development and analysis.
License: Artistic-2.0
VignetteBuilder: knitr
LazyData: false
URL: https://github.com/ccb-hms/CyCIFData
BugReports: https://github.com/ccb-hms/CyCIFData/issues
Depends:
    R (>= 4.2.0),
    CytoImageList,
    SpatialExperiment,
    ZarrExperiment
Imports: 
    rhdf5,
    ExperimentHub,
    HDF5Array
Suggests:
    knitr,
    rmarkdown,
    testthat,
    BiocStyle
Remotes:
    Bioconductor/ZarrExperiment,
    BodenmillerGroup/CytoImageList
biocViews:
    ExperimentHub,
    ExpressionData,
    HighThroughputImagingData,
    Homo_sapiens_Data,
    SingleCellData,
    SpatialData
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.1