From 7339d254e9c7a423bb64f74170d8aa20fba757f8 Mon Sep 17 00:00:00 2001 From: Christoph Gohlke Date: Tue, 18 Jun 2024 20:00:08 +0000 Subject: [PATCH] Release v2024.6.18 --- README.rst | 25 ++++++++++++++++--------- 1 file changed, 16 insertions(+), 9 deletions(-) diff --git a/README.rst b/README.rst index 8216e20..aaf478a 100644 --- a/README.rst +++ b/README.rst @@ -12,7 +12,7 @@ Tifffile is a Python library to Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, DNG, STK, LSM, SGI, NIHImage, ImageJ, MMStack, NDTiff, FluoView, ScanImage, SEQ, GEL, SVS, SCN, SIS, BIF, ZIF (Zoomable Image File Format), QPTIFF (QPI, PKI), NDPI, -Philips DP, and GeoTIFF formatted files. +AVS, Philips DP, and GeoTIFF formatted files. Image data can be read as NumPy arrays or Zarr arrays/groups from strips, tiles, pages (IFDs), SubIFDs, higher order series, and pyramidal levels. @@ -33,7 +33,7 @@ many proprietary metadata formats. :Author: `Christoph Gohlke `_ :License: BSD 3-Clause -:Version: 2024.5.22 +:Version: 2024.6.18 :DOI: `10.5281/zenodo.6795860 `_ Quickstart @@ -69,25 +69,30 @@ Requirements This revision was tested with the following requirements and dependencies (other versions may work): -- `CPython `_ 3.9.13, 3.10.11, 3.11.9, 3.12.3, 64-bit -- `NumPy `_ 1.26.4 +- `CPython `_ 3.9.13, 3.10.11, 3.11.9, 3.12.4, 64-bit +- `NumPy `_ 2.0.0 - `Imagecodecs `_ 2024.1.1 (required for encoding or decoding LZW, JPEG, etc. compressed segments) -- `Matplotlib `_ 3.8.4 +- `Matplotlib `_ 3.9.0 (required for plotting) - `Lxml `_ 5.2.2 (required only for validating and printing XML) -- `Zarr `_ 2.18.1 +- `Zarr `_ 2.18.2 (required only for opening Zarr stores) -- `Fsspec `_ 2024.5.0 +- `Fsspec `_ 2024.6.0 (required only for opening ReferenceFileSystem files) Revisions --------- +2024.6.18 + +- Pass 5086 tests. +- Ensure TiffPage.nodata is castable to dtype (breaking, #260). +- Support Argos AVS slides. + 2024.5.22 -- Pass 5084 tests. - Derive TiffPages, TiffPageSeries, FileSequence, StoredShape from Sequence. - Truncate circular IFD chain, do not raise TiffFileError (breaking). - Deprecate access to TiffPages.pages and FileSequence.files. @@ -96,7 +101,7 @@ Revisions - Add iccprofile property to TiffPage and parameter to TiffWriter.write. - Do not detect VSI as SIS format. - Limit length of logged exception messages. -- Work around GitHub not rendering docstring examples (#254, #255). +- Fix docstring examples not correctly rendered on GitHub (#254, #255). 2024.5.10 @@ -363,6 +368,8 @@ References - PerkinElmer image format. https://downloads.openmicroscopy.org/images/Vectra-QPTIFF/perkinelmer/PKI_Image%20Format.docx - NDTiffStorage. https://github.com/micro-manager/NDTiffStorage +- Argos AVS File Format. + https://github.com/user-attachments/files/15580286/ARGOS.AVS.File.Format.pdf Examples --------