Skip to content

Latest commit

 

History

History
25 lines (18 loc) · 1.15 KB

README.md

File metadata and controls

25 lines (18 loc) · 1.15 KB

BigNets

Testing EpiModel for big networks

Setup

This project works with renv. Before trying to run the scripts, you must initialize it with renv::init() and choose "Restore the project from the lockfile.". This will install the packages dependencies in their correct versions.

Note: some packages are from private GitHub repositories. You need to have access to them and have you private Access Token setup correctly.

Selecting the size of the networks

The goal of this project is to experiment with different network size. For consistency across the scripts, the networks size to use is defined in "R/utils-netsize.R". This script create the NETSIZE variable and define the corresponding netsize_string which is a formatted string to be used for saving ".rds" files with consistent names (it prevents the conversion of big numbers in scientific format in strings).

Setting NETSIZE with this script will avoid discrepancies in network sizes between the different scripts of the project.