Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

CTR: [term label] #1

Open
cmrn-rhi opened this issue Jul 20, 2022 · 0 comments
Open

CTR: [term label] #1

cmrn-rhi opened this issue Jul 20, 2022 · 0 comments
Labels
change term request Ontology term change request training

Comments

@cmrn-rhi
Copy link
Member

cmrn-rhi commented Jul 20, 2022

Change Term Request (CTR)

If requesting the addition of annotation(s), please fill in the appropriate fields with the desired information. You may request multiple terms in a single issue - delete annotation fields that are irrelevant to your request. We cannot guarantee requests will be taken exactly as specified, changes may be made at the discretion of the curator.

[Term Label] [Term ID]

Ontology:

Alternative Label:
Exact Synonym:
Narrow Synonym:
Broad Synonym:
Definition:
Definition Source:
Database Cross Reference:

Additional Comments (not an annotation):


Contributor Attribution: {Optional. ORCiD is preferred - this is so we can list you as a contributor [dc:contributor].}


Annotation Guide:

Term Label: An rdfs:label that provides a human-readable description of a resource.
Term ID: An ontology IRI (e.g., FOODON:00001002) or the PURL (e.g., http://purl.obolibrary.org/obo/FOODON_00001002).
Ontology: The ontology the term is being requested for - e.g., GenEpiO, FoodOn, ENVO, OBI... This guide is not an exact match for a term request at a specific OBO Foundry ontology, but will give you useful guidance and practice for common annotations.
Alternative Label: "A label for a class or property that can be used to refer to the class or property instead of the preferred rdfs:label. Alternative labels should be used to indicate community- or context-specific labels, abbreviations, shorthand forms and the like." [IAO:0000118]
Exact Synonym: "An alternative label for a class or property which has the exact same meaning than the preferred name/primary label." [hasExactSynonym]
Narrow Synonym: "An alternative label for a class or property which has a more specific meaning than the preferred name/primary label." [hasNarrowSynonym]
Broad Synonym: "An alternative label for a class or property which has a more general meaning than the preferred name/primary label." [hasBroadSynonym]
Definition: "The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions." [IAO:0000115] - if you aren't sure how to meet this requirements, don't fret - give a definition and the ontology curator will restructure it to meet the definition requirements.
Definition Source: "Formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition." [IAO:0000119]
Database Cross Reference: For when you want to cross reference with another database identifier (e.g., MIxS, MESH, etc.) [hasDBXref]
Additional Comments (not an annotation): Additional context is valuable to ontology curators to ensure the changes they make are appropriate for your need. If the curator deems it necessary, they may include it as a "comment" [comment] or "editor note" [IAO:0000116] annotation.

@cmrn-rhi cmrn-rhi added training change term request Ontology term change request labels Jul 20, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
change term request Ontology term change request training
Projects
None yet
Development

No branches or pull requests

1 participant