NAMESPACE

# Generated by roxygen2: do not edit by hand

export(TvTi)
export(cnFreq)
export(cnSpec)
export(cnView)
export(compIdent)
export(covBars)
export(genCov)
export(geneViz)
export(ideoView)
export(lohSpec)
export(lohView)
export(lolliplot)
export(waterfall)
import(ggplot2)
importFrom(AnnotationDbi,select)
importFrom(BiocGenerics,unlist)
importFrom(Biostrings,alphabetFrequency)
importFrom(Biostrings,getSeq)
importFrom(DBI,dbConnect)
importFrom(DBI,dbDisconnect)
importFrom(DBI,dbGetQuery)
importFrom(FField,FFieldPtRep)
importFrom(GenomicFeatures,transcriptsByOverlaps)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,GRangesList)
importFrom(GenomicRanges,end)
importFrom(GenomicRanges,gaps)
importFrom(GenomicRanges,intersect)
importFrom(GenomicRanges,mcols)
importFrom(GenomicRanges,reduce)
importFrom(GenomicRanges,seqnames)
importFrom(GenomicRanges,start)
importFrom(GenomicRanges,strand)
importFrom(GenomicRanges,values)
importFrom(IRanges,IRanges)
importFrom(IRanges,ranges)
importFrom(IRanges,relist)
importFrom(Rsamtools,ScanBamParam)
importFrom(Rsamtools,pileup)
importFrom(Rsamtools,scanBam)
importFrom(biomaRt,getBM)
importFrom(biomaRt,listDatasets)
importFrom(biomaRt,useDataset)
importFrom(biomaRt,useMart)
importFrom(ggplot2,ggplotGrob)
importFrom(grid,grid.draw)
importFrom(grid,unit.pmax)
importFrom(gridExtra,arrangeGrob)
importFrom(gridExtra,grid.arrange)
importFrom(gridExtra,rbind.gtable)
importFrom(gtable,gtable_add_grob)
importFrom(gtable,gtable_add_rows)
importFrom(gtools,mixedsort)
importFrom(plyr,adply)
importFrom(plyr,count)
importFrom(plyr,ldply)
importFrom(plyr,rbind.fill)
importFrom(reshape2,dcast)
importFrom(reshape2,melt)
importFrom(scales,log10_trans)
importFrom(scales,rescale)
importFrom(scales,squish)
importFrom(stats,aggregate)
importFrom(stats,na.omit)
importFrom(stats,setNames)
importFrom(utils,read.delim)
importFrom(utils,tail)
importFrom(viridis,scale_fill_viridis)
importFrom(viridis,viridis)