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Now that we have the uncorrelated RDF function mostly working, lets create a python file, or a function or set of functions that can calculate the RDF on an entire signac workspace, or a subset of the workspace.
Maybe its one function that calculates and saves the data to a text file, then another that can plot the resulting text files
Some ideas:
Function that takes a state point dictionary and that can be used by signac to filter the workspace
We should be able to specify atom types to be used in the RDF calculation
Save the rdf results to a text file in each workspace dir
Function that can quickly generate a comparison plot of RDFs. Maybe we specify a constant (e.g. density value), then specify the range of another variable (e.g. temperature)
Once we have working examples in notebooks lets move the code over to a .py file as well so we can import and use the functions in other python files.
Once we have a working example we can also look at implementing it in a signac-flow post processing work flow.
The text was updated successfully, but these errors were encountered:
Now that we have the uncorrelated RDF function mostly working, lets create a python file, or a function or set of functions that can calculate the RDF on an entire signac workspace, or a subset of the workspace.
Maybe its one function that calculates and saves the data to a text file, then another that can plot the resulting text files
Some ideas:
Function that takes a state point dictionary and that can be used by signac to filter the workspace
We should be able to specify atom types to be used in the RDF calculation
Save the rdf results to a text file in each workspace dir
Function that can quickly generate a comparison plot of RDFs. Maybe we specify a constant (e.g. density value), then specify the range of another variable (e.g. temperature)
Once we have working examples in notebooks lets move the code over to a .py file as well so we can import and use the functions in other python files.
Once we have a working example we can also look at implementing it in a signac-flow post processing work flow.
The text was updated successfully, but these errors were encountered: