diff --git a/templates/android/template/app/src/main/AndroidManifest.xml b/templates/android/template/app/AndroidManifest.xml
similarity index 100%
rename from templates/android/template/app/src/main/AndroidManifest.xml
rename to templates/android/template/app/AndroidManifest.xml
diff --git a/templates/android/template/app/build.gradle b/templates/android/template/app/build.gradle
index 1a3ded3cd21..184a68947f0 100644
--- a/templates/android/template/app/build.gradle
+++ b/templates/android/template/app/build.gradle
@@ -34,10 +34,11 @@ android {
     }
 
     sourceSets.main {
-        java.srcDirs "../src", "src/main/java"
-        res.srcDirs "../res", 'res', 'src/main/res', "${RES_PATH}/proj/res"
+        java.srcDirs "../src", "src"
+        res.srcDirs "../res", 'res', "${RES_PATH}/proj/res"
         jniLibs.srcDirs "../libs", 'libs'
-        assets.srcDirs "${RES_PATH}/data", 'src/main/assets'
+        manifest.srcFile "AndroidManifest.xml"
+        assets.srcDir "${RES_PATH}/data"
         jniLibs {
             // Vulkan validation layer
             // srcDir "${android.ndkDirectory}/sources/third_party/vulkan/src/build-android/jniLibs"
diff --git a/templates/android/template/app/src/main/java/com/cocos/game/AppActivity.java b/templates/android/template/app/src/com/cocos/game/AppActivity.java
similarity index 100%
rename from templates/android/template/app/src/main/java/com/cocos/game/AppActivity.java
rename to templates/android/template/app/src/com/cocos/game/AppActivity.java
diff --git a/templates/android/template/instantapp/src/main/AndroidManifest.xml b/templates/android/template/instantapp/AndroidManifest.xml
similarity index 100%
rename from templates/android/template/instantapp/src/main/AndroidManifest.xml
rename to templates/android/template/instantapp/AndroidManifest.xml
diff --git a/templates/android/template/instantapp/build.gradle b/templates/android/template/instantapp/build.gradle
index 728733cf51c..4336667f2c4 100644
--- a/templates/android/template/instantapp/build.gradle
+++ b/templates/android/template/instantapp/build.gradle
@@ -34,10 +34,11 @@ android {
     }
 
     sourceSets.main {
-        java.srcDirs "../src", "src/main/java"
-        res.srcDirs "../res", 'res', 'src/main/res', "${RES_PATH}/proj/res"
+        java.srcDirs "../src", "src"
+        res.srcDirs "../res", 'res', "${RES_PATH}/proj/res"
         jniLibs.srcDirs "../libs", 'libs'
-        assets.srcDirs "${RES_PATH}/data", 'src/main/assets'
+        manifest.srcFile "AndroidManifest.xml"
+        assets.srcDir "${RES_PATH}/data"
     }
 
     externalNativeBuild {
diff --git a/templates/android/template/instantapp/src/main/java/com/cocos/game/InstantActivity.java b/templates/android/template/instantapp/src/com/cocos/game/InstantActivity.java
similarity index 100%
rename from templates/android/template/instantapp/src/main/java/com/cocos/game/InstantActivity.java
rename to templates/android/template/instantapp/src/com/cocos/game/InstantActivity.java