From c4b087256f37547aed1c2bf4181bbc63a44f967c Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Fri, 8 Sep 2023 14:34:35 +0200 Subject: [PATCH 01/26] create object-lists package --- apps/researcher/package.json | 3 +- package-lock.json | 1249 +++++++++++++++-- package.json | 4 +- packages/object-lists/.eslintrc.js | 16 + packages/object-lists/drizzle.config.ts | 16 + .../migrations/0000_bored_silver_surfer.sql | 24 + .../migrations/meta/0000_snapshot.json | 165 +++ .../migrations/meta/_journal.json | 13 + packages/object-lists/package.json | 23 + packages/object-lists/src/actions.ts | 58 + packages/object-lists/src/db/connection.ts | 9 + packages/object-lists/src/db/schema.ts | 61 + packages/object-lists/src/index.ts | 1 + packages/object-lists/tsconfig.json | 8 + turbo.json | 8 +- 15 files changed, 1546 insertions(+), 112 deletions(-) create mode 100644 packages/object-lists/.eslintrc.js create mode 100644 packages/object-lists/drizzle.config.ts create mode 100644 packages/object-lists/migrations/0000_bored_silver_surfer.sql create mode 100644 packages/object-lists/migrations/meta/0000_snapshot.json create mode 100644 packages/object-lists/migrations/meta/_journal.json create mode 100644 packages/object-lists/package.json create mode 100644 packages/object-lists/src/actions.ts create mode 100644 packages/object-lists/src/db/connection.ts create mode 100644 packages/object-lists/src/db/schema.ts create mode 100644 packages/object-lists/src/index.ts create mode 100644 packages/object-lists/tsconfig.json diff --git a/apps/researcher/package.json b/apps/researcher/package.json index ff96ab932..a75c8950c 100644 --- a/apps/researcher/package.json +++ b/apps/researcher/package.json @@ -21,7 +21,7 @@ }, "dependencies": { "@clerk/localizations": "1.25.2", - "@clerk/nextjs": "4.21.13", + "@clerk/nextjs": "4.23.2", "@clerk/types": "3.51.0", "@colonial-collections/content": "*", "@colonial-collections/iris": "*", @@ -35,6 +35,7 @@ "fetch-sparql-endpoint": "3.3.3", "next": "13.4.7", "next-intl": "3.0.0-beta.7", + "@colonial-collections/object-lists": "*", "openseadragon": "4.1.0", "rdf-object": "1.14.0", "react": "18.2.0", diff --git a/package-lock.json b/package-lock.json index 80efbdd31..06b70c005 100644 --- a/package-lock.json +++ b/package-lock.json @@ -79,12 +79,13 @@ "version": "1.0.0", "dependencies": { "@clerk/localizations": "1.25.2", - "@clerk/nextjs": "4.21.13", + "@clerk/nextjs": "4.23.2", "@clerk/types": "3.51.0", "@colonial-collections/content": "*", "@colonial-collections/iris": "*", "@colonial-collections/label-fetcher": "*", "@colonial-collections/list-store": "*", + "@colonial-collections/object-lists": "*", "@hapi/hoek": "11.0.2", "@headlessui/react": "1.7.16", "@heroicons/react": "2.0.18", @@ -843,13 +844,14 @@ } }, "node_modules/@clerk/backend": { - "version": "0.23.7", - "resolved": "https://registry.npmjs.org/@clerk/backend/-/backend-0.23.7.tgz", - "integrity": 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"node_modules/webidl-conversions": { "version": "7.0.0", @@ -15590,6 +16590,12 @@ "node": ">=0.10.0" } }, + "node_modules/wordwrap": { + "version": "1.0.0", + "resolved": "https://registry.npmjs.org/wordwrap/-/wordwrap-1.0.0.tgz", + "integrity": "sha512-gvVzJFlPycKc5dZN4yPkP8w7Dc37BtP1yczEneOb4uq34pXZcvrtRTmWV8W+Ume+XCxKgbjM+nevkyFPMybd4Q==", + "dev": true + }, "node_modules/wrap-ansi": { "version": "7.0.0", "resolved": "https://registry.npmjs.org/wrap-ansi/-/wrap-ansi-7.0.0.tgz", @@ -15880,6 +16886,31 @@ "url": "https://github.com/sponsors/colinhacks" } }, + "packages/object-lists": { + "version": "0.0.0", + "dependencies": { + "drizzle-orm": "0.28.5", + "mysql2": "3.6.0" + }, + "devDependencies": { + "dotenv": "16.3.1", + "drizzle-kit": "0.19.13", + "eslint-config-custom": "*", + "tsconfig": "*" + } + }, + "packages/object-lists/node_modules/dotenv": { + "version": "16.3.1", + "resolved": "https://registry.npmjs.org/dotenv/-/dotenv-16.3.1.tgz", + "integrity": "sha512-IPzF4w4/Rd94bA9imS68tZBaYyBWSCE47V1RGuMrB94iyTOIEwRmVL2x/4An+6mETpLrKJ5hQkB8W4kFAadeIQ==", + "dev": true, + "engines": { + "node": ">=12" + }, + "funding": { + "url": "https://github.com/motdotla/dotenv?sponsor=1" + } + }, "packages/tailwind-config": { "version": "0.0.0", "dependencies": { diff --git a/package.json b/package.json index 9220b2799..b06af6c37 100644 --- a/package.json +++ b/package.json @@ -18,7 +18,9 @@ "test:ci": "turbo run test:ci", "test:integration": "turbo run test:integration", "test:integration:watch": "turbo run test:integration:watch", - "test:e2e": "turbo run test:e2e" + "test:e2e": "turbo run test:e2e", + "db:generate": "turbo run db:generate", + "db:push": "turbo run db:push" }, "devDependencies": { "eslint-config-custom": "*", diff --git a/packages/object-lists/.eslintrc.js b/packages/object-lists/.eslintrc.js new file mode 100644 index 000000000..2c605efe5 --- /dev/null +++ b/packages/object-lists/.eslintrc.js @@ -0,0 +1,16 @@ +module.exports = { + root: true, + // This tells ESLint to load the config from the package `eslint-config-custom` + extends: ['custom'], + env: { + jest: true, + }, + rules: { + 'node/no-extraneous-import': [ + 'error', + { + allowModules: ['@jest/globals'], + }, + ], + }, +}; diff --git a/packages/object-lists/drizzle.config.ts b/packages/object-lists/drizzle.config.ts new file mode 100644 index 000000000..3bb86c17d --- /dev/null +++ b/packages/object-lists/drizzle.config.ts @@ -0,0 +1,16 @@ +/* eslint-disable node/no-unpublished-import */ +import type {Config} from 'drizzle-kit'; +import * as dotenv from 'dotenv'; + +dotenv.config({ + path: '.env.local', +}); + +export default { + schema: './src/db/schema.ts', + out: './migrations', + driver: 'mysql2', + dbCredentials: { + connectionString: process.env['DATABASE_URL'] || '', + }, +} satisfies Config; diff --git a/packages/object-lists/migrations/0000_bored_silver_surfer.sql b/packages/object-lists/migrations/0000_bored_silver_surfer.sql new file mode 100644 index 000000000..0cc941464 --- /dev/null +++ b/packages/object-lists/migrations/0000_bored_silver_surfer.sql @@ -0,0 +1,24 @@ +CREATE TABLE `object_list_item` ( + `id` serial AUTO_INCREMENT NOT NULL, + `object_id` varchar(256) NOT NULL, + `list_id` int, + `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, + `created_by` varchar(256) NOT NULL, + CONSTRAINT `object_list_item_id` PRIMARY KEY(`id`), + CONSTRAINT `object_list_item_object_id_list_id_unique` UNIQUE(`object_id`,`list_id`) +); +--> statement-breakpoint +CREATE TABLE `object_list` ( + `id` serial AUTO_INCREMENT NOT NULL, + `name` varchar(256), + `description` text, + `community_id` varchar(256), + `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, + `created_by` varchar(256) NOT NULL, + `updated_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP, + CONSTRAINT `object_list_id` PRIMARY KEY(`id`) +); +--> statement-breakpoint +CREATE INDEX `object_id` ON `object_list_item` (`object_id`);--> statement-breakpoint +CREATE INDEX `list_id` ON `object_list_item` (`list_id`);--> statement-breakpoint +CREATE INDEX `community_id` ON `object_list` (`community_id`); \ No newline at end of file diff --git a/packages/object-lists/migrations/meta/0000_snapshot.json b/packages/object-lists/migrations/meta/0000_snapshot.json new file mode 100644 index 000000000..9922046a5 --- /dev/null +++ b/packages/object-lists/migrations/meta/0000_snapshot.json @@ -0,0 +1,165 @@ +{ + "version": "5", + "dialect": "mysql", + "id": "52a583ae-fe02-462b-ba89-6513c5b3466f", + "prevId": "00000000-0000-0000-0000-000000000000", + "tables": { + "object_list_item": { + "name": "object_list_item", + "columns": { + "id": { + "name": "id", + "type": "serial", + "primaryKey": false, + "notNull": true, + "autoincrement": true + }, + "object_id": { + "name": "object_id", + "type": "varchar(256)", + "primaryKey": false, + "notNull": true, + "autoincrement": false + }, + "list_id": { + "name": "list_id", + "type": "int", + "primaryKey": false, + "notNull": false, + "autoincrement": false + }, + "created_at": { + "name": "created_at", + "type": "timestamp", + "primaryKey": false, + "notNull": true, + "autoincrement": false, + "default": "CURRENT_TIMESTAMP" + }, + "created_by": { + "name": "created_by", + "type": "varchar(256)", + "primaryKey": false, + "notNull": true, + "autoincrement": false + } + }, + "indexes": { + "object_id": { + "name": "object_id", + "columns": [ + "object_id" + ], + "isUnique": false + }, + "list_id": { + "name": "list_id", + "columns": [ + "list_id" + ], + "isUnique": false + } + }, + "foreignKeys": {}, + "compositePrimaryKeys": { + "object_list_item_id": { + "name": "object_list_item_id", + "columns": [ + "id" + ] + } + }, + "uniqueConstraints": { + "object_list_item_object_id_list_id_unique": { + "name": "object_list_item_object_id_list_id_unique", + "columns": [ + "object_id", + "list_id" + ] + } + } + }, + "object_list": { + "name": "object_list", + "columns": { + "id": { + "name": "id", + "type": "serial", + "primaryKey": false, + "notNull": true, + "autoincrement": true + }, + "name": { + "name": "name", + "type": "varchar(256)", + "primaryKey": false, + "notNull": false, + "autoincrement": false + }, + "description": { + "name": "description", + "type": "text", + "primaryKey": false, + "notNull": false, + "autoincrement": false + }, + "community_id": { + "name": "community_id", + "type": "varchar(256)", + "primaryKey": false, + "notNull": false, + "autoincrement": false + }, + "created_at": { + "name": "created_at", + "type": "timestamp", + "primaryKey": false, + "notNull": true, + "autoincrement": false, + "default": "CURRENT_TIMESTAMP" + }, + "created_by": { + "name": "created_by", + "type": "varchar(256)", + "primaryKey": false, + "notNull": true, + "autoincrement": false + }, + "updated_at": { + "name": "updated_at", + "type": "timestamp", + "primaryKey": false, + "notNull": true, + "autoincrement": false, + "onUpdate": true, + "default": "CURRENT_TIMESTAMP" + } + }, + "indexes": { + "community_id": { + "name": "community_id", + "columns": [ + "community_id" + ], + "isUnique": false + } + }, + "foreignKeys": {}, + "compositePrimaryKeys": { + "object_list_id": { + "name": "object_list_id", + "columns": [ + "id" + ] + } + }, + "uniqueConstraints": {} + } + }, + "schemas": {}, + "_meta": { + "schemas": {}, + "tables": {}, + "columns": {} + } +} \ No newline at end of file diff --git a/packages/object-lists/migrations/meta/_journal.json b/packages/object-lists/migrations/meta/_journal.json new file mode 100644 index 000000000..fd0d03310 --- /dev/null +++ b/packages/object-lists/migrations/meta/_journal.json @@ -0,0 +1,13 @@ +{ + "version": "5", + "dialect": "mysql", + "entries": [ + { + "idx": 0, + "version": "5", + "when": 1693907880060, + "tag": "0000_bored_silver_surfer", + "breakpoints": true + } + ] +} \ No newline at end of file diff --git a/packages/object-lists/package.json b/packages/object-lists/package.json new file mode 100644 index 000000000..b905650ee --- /dev/null +++ b/packages/object-lists/package.json @@ -0,0 +1,23 @@ +{ + "name": "@colonial-collections/object-lists", + "version": "0.0.0", + "private": true, + "main": "./src/index.ts", + "types": "./src/index.ts", + "scripts": { + "db:generate": "drizzle-kit generate:mysql", + "db:push": "drizzle-kit push:mysql", + "db:drop": "drizzle-kit drop", + "db:studio": "dotenv -e ../../.env.local drizzle-kit studio" + }, + "devDependencies": { + "dotenv": "16.3.1", + "drizzle-kit": "0.19.13", + "eslint-config-custom": "*", + "tsconfig": "*" + }, + "dependencies": { + "drizzle-orm": "0.28.5", + "mysql2": "3.6.0" + } +} diff --git a/packages/object-lists/src/actions.ts b/packages/object-lists/src/actions.ts new file mode 100644 index 000000000..9d96841bb --- /dev/null +++ b/packages/object-lists/src/actions.ts @@ -0,0 +1,58 @@ +'use server'; + +import {objectLists, objectListItems} from './db/schema'; +import db from './db/connection'; + +export async function getAllCommunityLists(communityId: string) { + return db.query.objectLists.findMany({ + where: (objectLists, {eq}) => eq(objectLists.communityId, communityId), + }); +} + +export async function getAllCommunityListsWithObjects(communityId: string) { + return db.query.objectLists.findMany({ + where: (objectLists, {eq}) => eq(objectLists.communityId, communityId), + with: { + objects: true, + }, + }); +} + +interface createListForCommunityProps { + communityId: string; + userId: string; + name: string; + description: string; +} + +export async function createListForCommunity({ + communityId, + name, + description, + userId, +}: createListForCommunityProps) { + return db.insert(objectLists).values({ + communityId, + name, + description, + createdBy: userId, + }); +} + +export interface AddObjectToListProps { + listId: number; + objectId: string; + userId: string; +} + +export async function addObjectToList({ + listId, + objectId, + userId, +}: AddObjectToListProps) { + return db.insert(objectListItems).values({ + listId, + objectId, + createdBy: userId, + }); +} diff --git a/packages/object-lists/src/db/connection.ts b/packages/object-lists/src/db/connection.ts new file mode 100644 index 000000000..6657d5a88 --- /dev/null +++ b/packages/object-lists/src/db/connection.ts @@ -0,0 +1,9 @@ +import * as schema from './schema'; +import {drizzle} from 'drizzle-orm/mysql2'; +import mysql from 'mysql2/promise'; + +const poolConnection = mysql.createPool({ + uri: process.env['DATABASE_URL'] || '', +}); + +export default drizzle(poolConnection, {schema, mode: 'planetscale'}); diff --git a/packages/object-lists/src/db/schema.ts b/packages/object-lists/src/db/schema.ts new file mode 100644 index 000000000..1aa7779da --- /dev/null +++ b/packages/object-lists/src/db/schema.ts @@ -0,0 +1,61 @@ +import { + index, + timestamp, + mysqlTable, + serial, + varchar, + text, + unique, + int, +} from 'drizzle-orm/mysql-core'; +import {sql, relations} from 'drizzle-orm'; + +export const objectLists = mysqlTable( + 'object_list', + { + id: serial('id').primaryKey(), + name: varchar('name', {length: 256}), + description: text('description'), + communityId: varchar('community_id', {length: 256}), + createdAt: timestamp('created_at') + .default(sql`CURRENT_TIMESTAMP`) + .notNull(), + createdBy: varchar('created_by', {length: 256}).notNull(), + updatedAt: timestamp('updated_at') + .default(sql`CURRENT_TIMESTAMP`) + .onUpdateNow() + .notNull(), + }, + list => ({ + communityId: index('community_id').on(list.communityId), + }) +); + +export const objectListsRelations = relations(objectLists, ({many}) => ({ + objects: many(objectListItems), +})); + +export const objectListItems = mysqlTable( + 'object_list_item', + { + id: serial('id').primaryKey(), + objectId: varchar('object_id', {length: 256}).notNull(), + listId: int('list_id'), + createdAt: timestamp('created_at') + .default(sql`CURRENT_TIMESTAMP`) + .notNull(), + createdBy: varchar('created_by', {length: 256}).notNull(), + }, + item => ({ + objectId: index('object_id').on(item.objectId), + listId: index('list_id').on(item.listId), + unique: unique().on(item.objectId, item.listId), + }) +); + +export const objectListItemsRelations = relations(objectListItems, ({one}) => ({ + list: one(objectLists, { + fields: [objectListItems.listId], + references: [objectLists.id], + }), +})); diff --git a/packages/object-lists/src/index.ts b/packages/object-lists/src/index.ts new file mode 100644 index 000000000..485f1b10a --- /dev/null +++ b/packages/object-lists/src/index.ts @@ -0,0 +1 @@ +export * from './actions'; diff --git a/packages/object-lists/tsconfig.json b/packages/object-lists/tsconfig.json new file mode 100644 index 000000000..e2457dc1b --- /dev/null +++ b/packages/object-lists/tsconfig.json @@ -0,0 +1,8 @@ +{ + "extends": "tsconfig/react-library.json", + "compilerOptions": { + "rootDir": "./src", + "outDir": "./build" + }, + "include": ["src/**/*.ts", "db/seed.ts", "migrate.mjs"] +} diff --git a/turbo.json b/turbo.json index bc2a659f0..d234beba5 100644 --- a/turbo.json +++ b/turbo.json @@ -19,6 +19,12 @@ "test:ci": {}, "test:integration": {}, "test:integration:watch": {}, - "test:e2e": {} + "test:e2e": {}, + "db:generate": { + "cache": false + }, + "db:push": { + "cache": false + } } } From 5f3ca2372b2fc30d18326ab8cb1eab2171ddbc34 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Sat, 9 Sep 2023 09:10:58 +0200 Subject: [PATCH 02/26] Add GitHub actions for database migrations --- .../database-merge-schema-changes.yml | 36 +++++++++++++++++++ .github/workflows/database-push.yml | 31 ++++++++++++++++ 2 files changed, 67 insertions(+) create mode 100644 .github/workflows/database-merge-schema-changes.yml create mode 100644 .github/workflows/database-push.yml diff --git a/.github/workflows/database-merge-schema-changes.yml b/.github/workflows/database-merge-schema-changes.yml new file mode 100644 index 000000000..83e52ece6 --- /dev/null +++ b/.github/workflows/database-merge-schema-changes.yml @@ -0,0 +1,36 @@ +name: Merge schema changes +on: + pull_request: + branches: ["main"] + types: [closed] + paths: + - "packages/object-lists/migrations/**" + + +jobs: + merge_changes: + runs-on: ubuntu-latest + if: github.event.pull_request.merged == true + steps: + - name: checkout + uses: actions/checkout@v3 + - name: Create a deploy request + uses: planetscale/create-deploy-request-action@v1 + id: create_deploy_request + with: + org_name: colonial-collections + database_name: research-app + branch_name: development + env: + PLANETSCALE_SERVICE_TOKEN_ID: ${{ secrets.PLANETSCALE_SERVICE_TOKEN_ID }} + PLANETSCALE_SERVICE_TOKEN: ${{ secrets.PLANETSCALE_SERVICE_TOKEN }} + - name: Deploy a deploy request + uses: planetscale/deploy-deploy-request-action@v1 + with: + org_name: colonial-collections + database_name: research-app + number: ${{ steps.create_deploy_request.outputs.number }} + wait: true + env: + PLANETSCALE_SERVICE_TOKEN_ID: ${{ secrets.PLANETSCALE_SERVICE_TOKEN_ID }} + PLANETSCALE_SERVICE_TOKEN: ${{ secrets.PLANETSCALE_SERVICE_TOKEN }} \ No newline at end of file diff --git a/.github/workflows/database-push.yml b/.github/workflows/database-push.yml new file mode 100644 index 000000000..3def4698c --- /dev/null +++ b/.github/workflows/database-push.yml @@ -0,0 +1,31 @@ +name: Migrate database + +on: + pull_request: + branches: ["main"] + paths: + - "packages/object-lists/migrations/**" + +jobs: + migrate: + env: + DATABASE_URL: ${{ secrets.PLANETSCALE_DATABASE_URL }} + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v4 + - uses: actions/setup-node@v3 + with: + node-version: "18" + - run: npm ci + - run: npm run db:push + - name: add comment + uses: mshick/add-pr-comment@v2 + with: + message: | + ## Development database is migrated + + The development database migrated with the migrations found in this branch. + + **Warning**: All preview and development environments use the same database. This migration can affect all preview and development environments. + + After merging this pull request, the development database changes will merge into the production database. \ No newline at end of file From de4fbabb4d3ccba1d30f5332231207318400807a Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Sun, 10 Sep 2023 15:11:57 +0200 Subject: [PATCH 03/26] Add documentation about connection to the database --- README.md | 8 +++ package-lock.json | 89 ++++--------------------- packages/object-lists/README.md | 38 +++++++++++ packages/object-lists/drizzle.config.ts | 1 - packages/object-lists/package.json | 6 +- 5 files changed, 62 insertions(+), 80 deletions(-) create mode 100644 packages/object-lists/README.md diff --git a/README.md b/README.md index 7176a90c6..4e70c96be 100644 --- a/README.md +++ b/README.md @@ -68,6 +68,14 @@ Then run: docker run --rm -it -v "$PWD":/app -w /app node:18 /bin/bash +### connecting to the mySQL server +If you are not planning to alter the database. Connecting to the PlanetScale development database is the easiest option. + +Add `DATABASE_URL` environment variable the file `apps/researcher/.env.local` + +If you want to test migration, you need a local database. You can read more about this in the [object-lists readme](packages/object-lists/README.md). + + ### Install packages docker run --rm -it -v "$PWD":/app -w /app node:18 npm install --no-progress diff --git a/package-lock.json b/package-lock.json index 06b70c005..014c46075 100644 --- a/package-lock.json +++ b/package-lock.json @@ -3550,14 +3550,12 @@ "node_modules/@drizzle-team/studio": { "version": "0.0.5", "resolved": "https://registry.npmjs.org/@drizzle-team/studio/-/studio-0.0.5.tgz", - "integrity": "sha512-ps5qF0tMxWRVu+V5gvCRrQNqlY92aTnIKdq27gm9LZMSdaKYZt6AVvSK1dlUMzs6Rt0Jm80b+eWct6xShBKhIw==", - "dev": true + "integrity": "sha512-ps5qF0tMxWRVu+V5gvCRrQNqlY92aTnIKdq27gm9LZMSdaKYZt6AVvSK1dlUMzs6Rt0Jm80b+eWct6xShBKhIw==" }, "node_modules/@esbuild-kit/core-utils": { "version": "3.3.2", "resolved": "https://registry.npmjs.org/@esbuild-kit/core-utils/-/core-utils-3.3.2.tgz", "integrity": "sha512-sPRAnw9CdSsRmEtnsl2WXWdyquogVpB3yZ3dgwJfe8zrOzTsV7cJvmwrKVa+0ma5BoiGJ+BoqkMvawbayKUsqQ==", - "dev": true, "dependencies": { "esbuild": "~0.18.20", "source-map-support": "^0.5.21" @@ -3567,7 +3565,6 @@ "version": "0.6.1", "resolved": "https://registry.npmjs.org/source-map/-/source-map-0.6.1.tgz", "integrity": "sha512-UjgapumWlbMhkBgzT7Ykc5YXUT46F0iKu8SGXq0bcwP5dz/h0Plj6enJqjz1Zbq2l5WaqYnrVbwWOWMyF3F47g==", - "dev": true, "engines": { "node": ">=0.10.0" } @@ -3576,7 +3573,6 @@ "version": "0.5.21", "resolved": "https://registry.npmjs.org/source-map-support/-/source-map-support-0.5.21.tgz", "integrity": "sha512-uBHU3L3czsIyYXKX88fdrGovxdSCoTGDRZ6SYXtSRxLZUzHg5P/66Ht6uoUlHu9EZod+inXhKo3qQgwXUT/y1w==", - "dev": true, "dependencies": { "buffer-from": "^1.0.0", "source-map": "^0.6.0" @@ -3586,7 +3582,6 @@ "version": "2.6.5", "resolved": "https://registry.npmjs.org/@esbuild-kit/esm-loader/-/esm-loader-2.6.5.tgz", "integrity": "sha512-FxEMIkJKnodyA1OaCUoEvbYRkoZlLZ4d/eXFu9Fh8CbBBgP5EmZxrfTRyN0qpXZ4vOvqnE5YdRdcrmUUXuU+dA==", - "dev": true, "dependencies": { "@esbuild-kit/core-utils": "^3.3.2", "get-tsconfig": "^4.7.0" @@ -3599,7 +3594,6 @@ "cpu": [ "arm" ], - 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"dev": true, "optional": true, "os": [ "linux" @@ -3791,7 +3774,6 @@ "cpu": [ "ppc64" ], - "dev": true, "optional": true, "os": [ "linux" @@ -3807,7 +3789,6 @@ "cpu": [ "riscv64" ], - "dev": true, "optional": true, "os": [ "linux" @@ -3823,7 +3804,6 @@ "cpu": [ "s390x" ], - "dev": true, "optional": true, "os": [ "linux" @@ -3839,7 +3819,6 @@ "cpu": [ "x64" ], - "dev": true, "optional": true, "os": [ "linux" @@ -3855,7 +3834,6 @@ "cpu": [ "x64" ], - "dev": true, "optional": true, "os": [ "netbsd" @@ -3871,7 +3849,6 @@ "cpu": [ "x64" ], - "dev": true, "optional": true, "os": [ "openbsd" @@ -3887,7 +3864,6 @@ "cpu": [ "x64" ], - "dev": true, "optional": true, "os": [ "sunos" @@ -3903,7 +3879,6 @@ "cpu": [ "arm64" ], - "dev": true, "optional": true, "os": [ "win32" @@ -3919,7 +3894,6 @@ "cpu": [ "ia32" ], - "dev": true, "optional": true, "os": [ "win32" @@ -3935,7 +3909,6 @@ "cpu": [ "x64" ], - "dev": true, "optional": true, "os": [ "win32" @@ -6500,8 +6473,7 @@ "node_modules/buffer-from": { "version": "1.1.2", "resolved": "https://registry.npmjs.org/buffer-from/-/buffer-from-1.1.2.tgz", - 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"dev": true + "integrity": "sha512-+5nt5AAniqsCnu2cEQQdpzCAh33kVx8n0VoFidKpB1dVVLAN/F+bgVOqOJqOnEnrhp222clB5p3vUlD+1QAnfg==" }, "node_modules/type-check": { "version": "0.4.0", @@ -16593,8 +16531,7 @@ "node_modules/wordwrap": { "version": "1.0.0", "resolved": "https://registry.npmjs.org/wordwrap/-/wordwrap-1.0.0.tgz", - "integrity": "sha512-gvVzJFlPycKc5dZN4yPkP8w7Dc37BtP1yczEneOb4uq34pXZcvrtRTmWV8W+Ume+XCxKgbjM+nevkyFPMybd4Q==", - "dev": true + "integrity": "sha512-gvVzJFlPycKc5dZN4yPkP8w7Dc37BtP1yczEneOb4uq34pXZcvrtRTmWV8W+Ume+XCxKgbjM+nevkyFPMybd4Q==" }, "node_modules/wrap-ansi": { "version": "7.0.0", @@ -16887,14 +16824,15 @@ } }, "packages/object-lists": { + "name": "@colonial-collections/object-lists", "version": "0.0.0", "dependencies": { + "dotenv": "16.3.1", + "drizzle-kit": "0.19.13", "drizzle-orm": "0.28.5", "mysql2": "3.6.0" }, "devDependencies": { - "dotenv": "16.3.1", - "drizzle-kit": "0.19.13", "eslint-config-custom": "*", "tsconfig": "*" } @@ -16903,7 +16841,6 @@ "version": "16.3.1", "resolved": "https://registry.npmjs.org/dotenv/-/dotenv-16.3.1.tgz", "integrity": "sha512-IPzF4w4/Rd94bA9imS68tZBaYyBWSCE47V1RGuMrB94iyTOIEwRmVL2x/4An+6mETpLrKJ5hQkB8W4kFAadeIQ==", - "dev": true, "engines": { "node": ">=12" }, diff --git a/packages/object-lists/README.md b/packages/object-lists/README.md new file mode 100644 index 000000000..9f05b95d4 --- /dev/null +++ b/packages/object-lists/README.md @@ -0,0 +1,38 @@ +# Object Lists + +This package is the database connector needed to read and write object lists. To connect to the database via the researcher app, ensure the environment variable DATABASE_URL is set in `apps/researcher/.env.local`. If you want to connect to the database outside the app to run scripts, add the DATABASE_URL to `packages/object-lists/.env.local`. + +# Option 1: Connecting with PlanetScale + +If you are not planning to alter the database. Connecting to the PlanetScale development database is the easiest option. You can find the needed DATABASE_URL in Vercel. + +# Option 2: Connecting with a local MySQL database (docker). + +You can create a MySQL database with docker if you prefer using a local database. For example, if you want to test migrations. Use the following command to start your MySQL container. It will create a new Docker volume called MySQL. + + docker run --name mysql -d \ + -p 3306:3306 \ + -e MYSQL_ROOT_PASSWORD=change-me \ + -v mysql:/var/lib/mysql \ + mysql:8 + +More commands can be found in the helpful blog [How to Use Docker for Your MySQL Database](https://earthly.dev/blog/docker-mysql/). + +Create a new database with: + + docker exec -it mysql mysql -p + mysql> CREATE DATABASE local_database_name + +Set the DATABASE_URL to: + + DATABASE_URL='mysql://root:{password}@localhost:3306/{database_name}' + +# Schema updates + +Whenever you apply changes to the schema, you need to run `npm run db:generate`, which will generate SQL migration for you. + +To push the changes to your local database, run `npm run db:push`. + +# Drizzle Studio + +With Drizzle Studio, you can explore the SQL database. Depending on the DATABASE_URL, you can explore both local and PlanetScale databases. Open Drizzle Studio with `npm run db:studio -w object-lists`. diff --git a/packages/object-lists/drizzle.config.ts b/packages/object-lists/drizzle.config.ts index 3bb86c17d..5e21e12c3 100644 --- a/packages/object-lists/drizzle.config.ts +++ b/packages/object-lists/drizzle.config.ts @@ -1,4 +1,3 @@ -/* eslint-disable node/no-unpublished-import */ import type {Config} from 'drizzle-kit'; import * as dotenv from 'dotenv'; diff --git a/packages/object-lists/package.json b/packages/object-lists/package.json index b905650ee..7b5027655 100644 --- a/packages/object-lists/package.json +++ b/packages/object-lists/package.json @@ -8,15 +8,15 @@ "db:generate": "drizzle-kit generate:mysql", "db:push": "drizzle-kit push:mysql", "db:drop": "drizzle-kit drop", - "db:studio": "dotenv -e ../../.env.local drizzle-kit studio" + "db:studio": "drizzle-kit studio" }, "devDependencies": { - "dotenv": "16.3.1", - "drizzle-kit": "0.19.13", "eslint-config-custom": "*", "tsconfig": "*" }, "dependencies": { + "dotenv": "16.3.1", + "drizzle-kit": "0.19.13", "drizzle-orm": "0.28.5", "mysql2": "3.6.0" } From c8492d04a5b0c79f8a0698f1c35e20d9b3806688 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Wed, 13 Sep 2023 13:51:56 +0200 Subject: [PATCH 04/26] Minor changes (renames, typos, etc) --- ...s.yml => database-merge-and-deploy-schema-changes.yml} | 8 +++----- .../workflows/{database-push.yml => database-migrate.yml} | 4 ++-- README.md | 3 ++- packages/object-lists/src/actions.ts | 6 +++--- packages/object-lists/src/db/connection.ts | 2 +- packages/object-lists/tsconfig.json | 4 ++-- 6 files changed, 13 insertions(+), 14 deletions(-) rename .github/workflows/{database-merge-schema-changes.yml => database-merge-and-deploy-schema-changes.yml} (89%) rename .github/workflows/{database-push.yml => database-migrate.yml} (91%) diff --git a/.github/workflows/database-merge-schema-changes.yml b/.github/workflows/database-merge-and-deploy-schema-changes.yml similarity index 89% rename from .github/workflows/database-merge-schema-changes.yml rename to .github/workflows/database-merge-and-deploy-schema-changes.yml index 83e52ece6..e64866d8e 100644 --- a/.github/workflows/database-merge-schema-changes.yml +++ b/.github/workflows/database-merge-and-deploy-schema-changes.yml @@ -1,11 +1,9 @@ -name: Merge schema changes +name: Merge and deploy database schema changes on: pull_request: branches: ["main"] types: [closed] - paths: - - "packages/object-lists/migrations/**" - + paths: ["packages/object-lists/migrations/**"] jobs: merge_changes: @@ -13,7 +11,7 @@ jobs: if: github.event.pull_request.merged == true steps: - name: checkout - uses: actions/checkout@v3 + uses: actions/checkout@v4 - name: Create a deploy request uses: planetscale/create-deploy-request-action@v1 id: create_deploy_request diff --git a/.github/workflows/database-push.yml b/.github/workflows/database-migrate.yml similarity index 91% rename from .github/workflows/database-push.yml rename to .github/workflows/database-migrate.yml index 3def4698c..9cbe21f9d 100644 --- a/.github/workflows/database-push.yml +++ b/.github/workflows/database-migrate.yml @@ -18,11 +18,11 @@ jobs: node-version: "18" - run: npm ci - run: npm run db:push - - name: add comment + - name: Add comment uses: mshick/add-pr-comment@v2 with: message: | - ## Development database is migrated + ## Database schema changes have been applied The development database migrated with the migrations found in this branch. diff --git a/README.md b/README.md index 4e70c96be..72eb756a1 100644 --- a/README.md +++ b/README.md @@ -68,7 +68,8 @@ Then run: docker run --rm -it -v "$PWD":/app -w /app node:18 /bin/bash -### connecting to the mySQL server +### Connecting to the MySQL server + If you are not planning to alter the database. Connecting to the PlanetScale development database is the easiest option. Add `DATABASE_URL` environment variable the file `apps/researcher/.env.local` diff --git a/packages/object-lists/src/actions.ts b/packages/object-lists/src/actions.ts index 9d96841bb..089edcd45 100644 --- a/packages/object-lists/src/actions.ts +++ b/packages/object-lists/src/actions.ts @@ -3,7 +3,7 @@ import {objectLists, objectListItems} from './db/schema'; import db from './db/connection'; -export async function getAllCommunityLists(communityId: string) { +export async function getCommunityLists(communityId: string) { return db.query.objectLists.findMany({ where: (objectLists, {eq}) => eq(objectLists.communityId, communityId), }); @@ -18,7 +18,7 @@ export async function getAllCommunityListsWithObjects(communityId: string) { }); } -interface createListForCommunityProps { +interface CreateListForCommunityProps { communityId: string; userId: string; name: string; @@ -30,7 +30,7 @@ export async function createListForCommunity({ name, description, userId, -}: createListForCommunityProps) { +}: CreateListForCommunityProps) { return db.insert(objectLists).values({ communityId, name, diff --git a/packages/object-lists/src/db/connection.ts b/packages/object-lists/src/db/connection.ts index 6657d5a88..95746481c 100644 --- a/packages/object-lists/src/db/connection.ts +++ b/packages/object-lists/src/db/connection.ts @@ -3,7 +3,7 @@ import {drizzle} from 'drizzle-orm/mysql2'; import mysql from 'mysql2/promise'; const poolConnection = mysql.createPool({ - uri: process.env['DATABASE_URL'] || '', + uri: process.env['DATABASE_URL'], }); export default drizzle(poolConnection, {schema, mode: 'planetscale'}); diff --git a/packages/object-lists/tsconfig.json b/packages/object-lists/tsconfig.json index e2457dc1b..3200e3f01 100644 --- a/packages/object-lists/tsconfig.json +++ b/packages/object-lists/tsconfig.json @@ -1,8 +1,8 @@ { - "extends": "tsconfig/react-library.json", + "extends": "tsconfig/base.json", "compilerOptions": { "rootDir": "./src", "outDir": "./build" }, - "include": ["src/**/*.ts", "db/seed.ts", "migrate.mjs"] + "include": ["src/**/*.ts"] } From a46c218076c09939df52bc5728416e2e6408bda0 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Thu, 14 Sep 2023 15:55:29 +0200 Subject: [PATCH 05/26] Update database github actions --- .../workflows/database-merge-and-deploy-schema-changes.yml | 4 ++-- .github/workflows/database-migrate.yml | 3 +-- 2 files changed, 3 insertions(+), 4 deletions(-) diff --git a/.github/workflows/database-merge-and-deploy-schema-changes.yml b/.github/workflows/database-merge-and-deploy-schema-changes.yml index e64866d8e..00089f2d0 100644 --- a/.github/workflows/database-merge-and-deploy-schema-changes.yml +++ b/.github/workflows/database-merge-and-deploy-schema-changes.yml @@ -17,7 +17,7 @@ jobs: id: create_deploy_request with: org_name: colonial-collections - database_name: research-app + database_name: datahub branch_name: development env: PLANETSCALE_SERVICE_TOKEN_ID: ${{ secrets.PLANETSCALE_SERVICE_TOKEN_ID }} @@ -26,7 +26,7 @@ jobs: uses: planetscale/deploy-deploy-request-action@v1 with: org_name: colonial-collections - database_name: research-app + database_name: datahub number: ${{ steps.create_deploy_request.outputs.number }} wait: true env: diff --git a/.github/workflows/database-migrate.yml b/.github/workflows/database-migrate.yml index 9cbe21f9d..ebbb46898 100644 --- a/.github/workflows/database-migrate.yml +++ b/.github/workflows/database-migrate.yml @@ -3,8 +3,7 @@ name: Migrate database on: pull_request: branches: ["main"] - paths: - - "packages/object-lists/migrations/**" + paths: ["packages/object-lists/migrations/**"] jobs: migrate: From 7bb20a9c432661c46da64b219be3987a1a245cf0 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Thu, 14 Sep 2023 16:07:10 +0200 Subject: [PATCH 06/26] Rename package and update readme --- ...tabase-merge-and-deploy-schema-changes.yml | 2 +- .github/workflows/database-migrate.yml | 2 +- README.md | 6 +-- apps/researcher/package.json | 2 +- package-lock.json | 48 ++++++++++++------- .../.eslintrc.js | 0 .../{object-lists => datahub-data}/README.md | 14 +++--- .../drizzle.config.ts | 0 .../migrations/0000_bored_silver_surfer.sql | 0 .../migrations/meta/0000_snapshot.json | 0 .../migrations/meta/_journal.json | 0 .../package.json | 2 +- .../src/actions.ts | 0 .../src/db/connection.ts | 0 .../src/db/schema.ts | 0 .../src/index.ts | 0 .../tsconfig.json | 0 17 files changed, 43 insertions(+), 33 deletions(-) rename packages/{object-lists => datahub-data}/.eslintrc.js (100%) rename packages/{object-lists => datahub-data}/README.md (56%) rename packages/{object-lists => datahub-data}/drizzle.config.ts (100%) rename packages/{object-lists => datahub-data}/migrations/0000_bored_silver_surfer.sql (100%) rename packages/{object-lists => datahub-data}/migrations/meta/0000_snapshot.json (100%) rename packages/{object-lists => datahub-data}/migrations/meta/_journal.json (100%) rename packages/{object-lists => datahub-data}/package.json (91%) rename packages/{object-lists => datahub-data}/src/actions.ts (100%) rename packages/{object-lists => datahub-data}/src/db/connection.ts (100%) rename packages/{object-lists => datahub-data}/src/db/schema.ts (100%) rename packages/{object-lists => datahub-data}/src/index.ts (100%) rename packages/{object-lists => datahub-data}/tsconfig.json (100%) diff --git a/.github/workflows/database-merge-and-deploy-schema-changes.yml b/.github/workflows/database-merge-and-deploy-schema-changes.yml index 00089f2d0..a46912390 100644 --- a/.github/workflows/database-merge-and-deploy-schema-changes.yml +++ b/.github/workflows/database-merge-and-deploy-schema-changes.yml @@ -3,7 +3,7 @@ on: pull_request: branches: ["main"] types: [closed] - paths: ["packages/object-lists/migrations/**"] + paths: ["packages/datahub-data/migrations/**"] jobs: merge_changes: diff --git a/.github/workflows/database-migrate.yml b/.github/workflows/database-migrate.yml index ebbb46898..035277699 100644 --- a/.github/workflows/database-migrate.yml +++ b/.github/workflows/database-migrate.yml @@ -3,7 +3,7 @@ name: Migrate database on: pull_request: branches: ["main"] - paths: ["packages/object-lists/migrations/**"] + paths: ["packages/datahub-data/migrations/**"] jobs: migrate: diff --git a/README.md b/README.md index 72eb756a1..4f5eb2211 100644 --- a/README.md +++ b/README.md @@ -70,11 +70,7 @@ Then run: ### Connecting to the MySQL server -If you are not planning to alter the database. Connecting to the PlanetScale development database is the easiest option. - -Add `DATABASE_URL` environment variable the file `apps/researcher/.env.local` - -If you want to test migration, you need a local database. You can read more about this in the [object-lists readme](packages/object-lists/README.md). +Add `DATABASE_URL` environment variable to the file `apps/researcher/.env.local`. More information about connecting to the database is in the [datahub-data readme](packages/datahub-data/README.md). ### Install packages diff --git a/apps/researcher/package.json b/apps/researcher/package.json index a75c8950c..a921eb1ef 100644 --- a/apps/researcher/package.json +++ b/apps/researcher/package.json @@ -35,7 +35,7 @@ "fetch-sparql-endpoint": "3.3.3", "next": "13.4.7", "next-intl": "3.0.0-beta.7", - "@colonial-collections/object-lists": "*", + "@colonial-collections/datahub-data": "*", "openseadragon": "4.1.0", "rdf-object": "1.14.0", "react": "18.2.0", diff --git a/package-lock.json b/package-lock.json index 014c46075..ba94151d3 100644 --- a/package-lock.json +++ b/package-lock.json @@ -82,10 +82,10 @@ "@clerk/nextjs": "4.23.2", "@clerk/types": "3.51.0", "@colonial-collections/content": "*", + "@colonial-collections/datahub-data": "*", "@colonial-collections/iris": "*", "@colonial-collections/label-fetcher": "*", "@colonial-collections/list-store": "*", - "@colonial-collections/object-lists": "*", "@hapi/hoek": "11.0.2", "@headlessui/react": "1.7.16", "@heroicons/react": "2.0.18", @@ -1074,6 +1074,10 @@ "resolved": "packages/content", "link": true }, + "node_modules/@colonial-collections/datahub-data": { + "resolved": "packages/datahub-data", + "link": true + }, "node_modules/@colonial-collections/iris": { "resolved": "packages/iris", "link": true @@ -1086,10 +1090,6 @@ "resolved": "packages/list-store", "link": true }, - "node_modules/@colonial-collections/object-lists": { - "resolved": "packages/object-lists", - "link": true - }, "node_modules/@colors/colors": { "version": "1.5.0", "resolved": "https://registry.npmjs.org/@colors/colors/-/colors-1.5.0.tgz", @@ -16721,6 +16721,30 @@ "node": "18.x" } }, + "packages/datahub-data": { + "version": "0.0.0", + "dependencies": { + "dotenv": "16.3.1", + "drizzle-kit": "0.19.13", + "drizzle-orm": "0.28.5", + "mysql2": "3.6.0" + }, + "devDependencies": { + "eslint-config-custom": "*", + "tsconfig": "*" + } + }, + "packages/datahub-data/node_modules/dotenv": { + "version": "16.3.1", + "resolved": "https://registry.npmjs.org/dotenv/-/dotenv-16.3.1.tgz", + "integrity": "sha512-IPzF4w4/Rd94bA9imS68tZBaYyBWSCE47V1RGuMrB94iyTOIEwRmVL2x/4An+6mETpLrKJ5hQkB8W4kFAadeIQ==", + "engines": { + "node": ">=12" + }, + "funding": { + "url": "https://github.com/motdotla/dotenv?sponsor=1" + } + }, "packages/eslint-config-custom": { "version": "0.0.0", "devDependencies": { @@ -16824,8 +16848,9 @@ } }, "packages/object-lists": { - "name": "@colonial-collections/object-lists", + "name": "@colonial-collections/datahub-data", "version": "0.0.0", + "extraneous": true, "dependencies": { "dotenv": "16.3.1", "drizzle-kit": "0.19.13", @@ -16837,17 +16862,6 @@ "tsconfig": "*" } }, - "packages/object-lists/node_modules/dotenv": { - "version": "16.3.1", - "resolved": "https://registry.npmjs.org/dotenv/-/dotenv-16.3.1.tgz", - "integrity": "sha512-IPzF4w4/Rd94bA9imS68tZBaYyBWSCE47V1RGuMrB94iyTOIEwRmVL2x/4An+6mETpLrKJ5hQkB8W4kFAadeIQ==", - "engines": { - "node": ">=12" - }, - "funding": { - "url": "https://github.com/motdotla/dotenv?sponsor=1" - } - }, "packages/tailwind-config": { "version": "0.0.0", "dependencies": { diff --git a/packages/object-lists/.eslintrc.js b/packages/datahub-data/.eslintrc.js similarity index 100% rename from packages/object-lists/.eslintrc.js rename to packages/datahub-data/.eslintrc.js diff --git a/packages/object-lists/README.md b/packages/datahub-data/README.md similarity index 56% rename from packages/object-lists/README.md rename to packages/datahub-data/README.md index 9f05b95d4..2b14575ad 100644 --- a/packages/object-lists/README.md +++ b/packages/datahub-data/README.md @@ -1,14 +1,14 @@ -# Object Lists +# Datahub data -This package is the database connector needed to read and write object lists. To connect to the database via the researcher app, ensure the environment variable DATABASE_URL is set in `apps/researcher/.env.local`. If you want to connect to the database outside the app to run scripts, add the DATABASE_URL to `packages/object-lists/.env.local`. +This package is the database connector needed to read and write Datahub data. To connect to the database via the researcher app, ensure the environment variable DATABASE_URL is set in `apps/researcher/.env.local`. If you want to connect to the database outside the app to run scripts, add the DATABASE_URL to `packages/datahub-data/.env.local`. # Option 1: Connecting with PlanetScale -If you are not planning to alter the database. Connecting to the PlanetScale development database is the easiest option. You can find the needed DATABASE_URL in Vercel. +Connecting to the PlanetScale development database is the easiest option. You can find the needed DATABASE_URL in Vercel. # Option 2: Connecting with a local MySQL database (docker). -You can create a MySQL database with docker if you prefer using a local database. For example, if you want to test migrations. Use the following command to start your MySQL container. It will create a new Docker volume called MySQL. +You can also create a MySQL database with docker if you prefer using a local database. Use the following command to start your MySQL container. It will create a new Docker volume called MySQL. docker run --name mysql -d \ -p 3306:3306 \ @@ -27,12 +27,12 @@ Set the DATABASE_URL to: DATABASE_URL='mysql://root:{password}@localhost:3306/{database_name}' -# Schema updates +# Schema migrations -Whenever you apply changes to the schema, you need to run `npm run db:generate`, which will generate SQL migration for you. +Whenever you make changes to the db schema in `src/db/schema`, you need to run `npm run db:generate`, which will generate a SQL migration file for you. To push the changes to your local database, run `npm run db:push`. # Drizzle Studio -With Drizzle Studio, you can explore the SQL database. Depending on the DATABASE_URL, you can explore both local and PlanetScale databases. Open Drizzle Studio with `npm run db:studio -w object-lists`. +With Drizzle Studio, you can explore the SQL database. Depending on the DATABASE_URL, you can explore both local and PlanetScale databases. Open Drizzle Studio with `npm run db:studio -w datahub-data`. diff --git a/packages/object-lists/drizzle.config.ts b/packages/datahub-data/drizzle.config.ts similarity index 100% rename from packages/object-lists/drizzle.config.ts rename to packages/datahub-data/drizzle.config.ts diff --git a/packages/object-lists/migrations/0000_bored_silver_surfer.sql b/packages/datahub-data/migrations/0000_bored_silver_surfer.sql similarity index 100% rename from packages/object-lists/migrations/0000_bored_silver_surfer.sql rename to packages/datahub-data/migrations/0000_bored_silver_surfer.sql diff --git a/packages/object-lists/migrations/meta/0000_snapshot.json b/packages/datahub-data/migrations/meta/0000_snapshot.json similarity index 100% rename from packages/object-lists/migrations/meta/0000_snapshot.json rename to packages/datahub-data/migrations/meta/0000_snapshot.json diff --git a/packages/object-lists/migrations/meta/_journal.json b/packages/datahub-data/migrations/meta/_journal.json similarity index 100% rename from packages/object-lists/migrations/meta/_journal.json rename to packages/datahub-data/migrations/meta/_journal.json diff --git a/packages/object-lists/package.json b/packages/datahub-data/package.json similarity index 91% rename from packages/object-lists/package.json rename to packages/datahub-data/package.json index 7b5027655..c5cb9e098 100644 --- a/packages/object-lists/package.json +++ b/packages/datahub-data/package.json @@ -1,5 +1,5 @@ { - "name": "@colonial-collections/object-lists", + "name": "@colonial-collections/datahub-data", "version": "0.0.0", "private": true, "main": "./src/index.ts", diff --git a/packages/object-lists/src/actions.ts b/packages/datahub-data/src/actions.ts similarity index 100% rename from packages/object-lists/src/actions.ts rename to packages/datahub-data/src/actions.ts diff --git a/packages/object-lists/src/db/connection.ts b/packages/datahub-data/src/db/connection.ts similarity index 100% rename from packages/object-lists/src/db/connection.ts rename to packages/datahub-data/src/db/connection.ts diff --git a/packages/object-lists/src/db/schema.ts b/packages/datahub-data/src/db/schema.ts similarity index 100% rename from packages/object-lists/src/db/schema.ts rename to packages/datahub-data/src/db/schema.ts diff --git a/packages/object-lists/src/index.ts b/packages/datahub-data/src/index.ts similarity index 100% rename from packages/object-lists/src/index.ts rename to packages/datahub-data/src/index.ts diff --git a/packages/object-lists/tsconfig.json b/packages/datahub-data/tsconfig.json similarity index 100% rename from packages/object-lists/tsconfig.json rename to packages/datahub-data/tsconfig.json From 3993c62679d718ad195208db675c58d2dd74d927 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Thu, 14 Sep 2023 16:31:56 +0200 Subject: [PATCH 07/26] Update database schema --- .../migrations/0000_bored_silver_surfer.sql | 24 ----------------- .../0000_initialize_object_lists.sql | 24 +++++++++++++++++ .../migrations/meta/0000_snapshot.json | 26 +++++++++---------- .../migrations/meta/_journal.json | 4 +-- packages/datahub-data/src/db/schema.ts | 16 ++++++------ 5 files changed, 47 insertions(+), 47 deletions(-) delete mode 100644 packages/datahub-data/migrations/0000_bored_silver_surfer.sql create mode 100644 packages/datahub-data/migrations/0000_initialize_object_lists.sql diff --git a/packages/datahub-data/migrations/0000_bored_silver_surfer.sql b/packages/datahub-data/migrations/0000_bored_silver_surfer.sql deleted file mode 100644 index 0cc941464..000000000 --- a/packages/datahub-data/migrations/0000_bored_silver_surfer.sql +++ /dev/null @@ -1,24 +0,0 @@ -CREATE TABLE `object_list_item` ( - `id` serial AUTO_INCREMENT NOT NULL, - `object_id` varchar(256) NOT NULL, - `list_id` int, - `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, - `created_by` varchar(256) NOT NULL, - CONSTRAINT `object_list_item_id` PRIMARY KEY(`id`), - CONSTRAINT `object_list_item_object_id_list_id_unique` UNIQUE(`object_id`,`list_id`) -); ---> statement-breakpoint -CREATE TABLE `object_list` ( - `id` serial AUTO_INCREMENT NOT NULL, - `name` varchar(256), - `description` text, - `community_id` varchar(256), - `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, - `created_by` varchar(256) NOT NULL, - `updated_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP, - CONSTRAINT `object_list_id` PRIMARY KEY(`id`) -); ---> statement-breakpoint -CREATE INDEX `object_id` ON `object_list_item` (`object_id`);--> statement-breakpoint -CREATE INDEX `list_id` ON `object_list_item` (`list_id`);--> statement-breakpoint -CREATE INDEX `community_id` ON `object_list` (`community_id`); \ No newline at end of file diff --git a/packages/datahub-data/migrations/0000_initialize_object_lists.sql b/packages/datahub-data/migrations/0000_initialize_object_lists.sql new file mode 100644 index 000000000..9357bcd56 --- /dev/null +++ b/packages/datahub-data/migrations/0000_initialize_object_lists.sql @@ -0,0 +1,24 @@ +CREATE TABLE `object_item` ( + `id` serial AUTO_INCREMENT NOT NULL, + `object_id` varchar(256) NOT NULL, + `object_list_id` int, + `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, + `created_by` varchar(256) NOT NULL, + CONSTRAINT `object_item_id` PRIMARY KEY(`id`), + CONSTRAINT `object_item_object_id_object_list_id_unique` UNIQUE(`object_id`,`object_list_id`) +); +--> statement-breakpoint +CREATE TABLE `object_list` ( + `id` serial AUTO_INCREMENT NOT NULL, + `name` varchar(256), + `description` text, + `community_id` varchar(256), + `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, + `created_by` varchar(256) NOT NULL, + `updated_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP, + CONSTRAINT `object_list_id` PRIMARY KEY(`id`) +); +--> statement-breakpoint +CREATE INDEX `object_id` ON `object_item` (`object_id`);--> statement-breakpoint +CREATE INDEX `object_list_id` ON `object_item` (`object_list_id`);--> statement-breakpoint +CREATE INDEX `community_id` ON `object_list` (`community_id`); \ No newline at end of file diff --git a/packages/datahub-data/migrations/meta/0000_snapshot.json b/packages/datahub-data/migrations/meta/0000_snapshot.json index 9922046a5..4eec56776 100644 --- a/packages/datahub-data/migrations/meta/0000_snapshot.json +++ b/packages/datahub-data/migrations/meta/0000_snapshot.json @@ -1,11 +1,11 @@ { "version": "5", "dialect": "mysql", - "id": "52a583ae-fe02-462b-ba89-6513c5b3466f", + "id": "4703ec87-b3bf-4f7d-99a9-14169d120da1", "prevId": "00000000-0000-0000-0000-000000000000", "tables": { - "object_list_item": { - "name": "object_list_item", + "object_item": { + "name": "object_item", "columns": { "id": { "name": "id", @@ -21,8 +21,8 @@ "notNull": true, "autoincrement": false }, - "list_id": { - "name": "list_id", + "object_list_id": { + "name": "object_list_id", "type": "int", "primaryKey": false, "notNull": false, @@ -52,29 +52,29 @@ ], "isUnique": false }, - "list_id": { - "name": "list_id", + "object_list_id": { + "name": "object_list_id", "columns": [ - "list_id" + "object_list_id" ], "isUnique": false } }, "foreignKeys": {}, "compositePrimaryKeys": { - "object_list_item_id": { - "name": "object_list_item_id", + "object_item_id": { + "name": "object_item_id", "columns": [ "id" ] } }, "uniqueConstraints": { - "object_list_item_object_id_list_id_unique": { - "name": "object_list_item_object_id_list_id_unique", + "object_item_object_id_object_list_id_unique": { + "name": "object_item_object_id_object_list_id_unique", "columns": [ "object_id", - "list_id" + "object_list_id" ] } } diff --git a/packages/datahub-data/migrations/meta/_journal.json b/packages/datahub-data/migrations/meta/_journal.json index fd0d03310..7878295cf 100644 --- a/packages/datahub-data/migrations/meta/_journal.json +++ b/packages/datahub-data/migrations/meta/_journal.json @@ -5,8 +5,8 @@ { "idx": 0, "version": "5", - "when": 1693907880060, - "tag": "0000_bored_silver_surfer", + "when": 1694701696423, + "tag": "0000_initialize_object_lists", "breakpoints": true } ] diff --git a/packages/datahub-data/src/db/schema.ts b/packages/datahub-data/src/db/schema.ts index 1aa7779da..ae1505741 100644 --- a/packages/datahub-data/src/db/schema.ts +++ b/packages/datahub-data/src/db/schema.ts @@ -32,15 +32,15 @@ export const objectLists = mysqlTable( ); export const objectListsRelations = relations(objectLists, ({many}) => ({ - objects: many(objectListItems), + objects: many(objectItems), })); -export const objectListItems = mysqlTable( - 'object_list_item', +export const objectItems = mysqlTable( + 'object_item', { id: serial('id').primaryKey(), objectId: varchar('object_id', {length: 256}).notNull(), - listId: int('list_id'), + objectListId: int('object_list_id'), createdAt: timestamp('created_at') .default(sql`CURRENT_TIMESTAMP`) .notNull(), @@ -48,14 +48,14 @@ export const objectListItems = mysqlTable( }, item => ({ objectId: index('object_id').on(item.objectId), - listId: index('list_id').on(item.listId), - unique: unique().on(item.objectId, item.listId), + objectListId: index('object_list_id').on(item.objectListId), + unique: unique().on(item.objectId, item.objectListId), }) ); -export const objectListItemsRelations = relations(objectListItems, ({one}) => ({ +export const objectItemsRelations = relations(objectItems, ({one}) => ({ list: one(objectLists, { - fields: [objectListItems.listId], + fields: [objectItems.objectListId], references: [objectLists.id], }), })); From fb10974cf9093bc88ab57aed829b8423160a6127 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Fri, 15 Sep 2023 16:42:14 +0200 Subject: [PATCH 08/26] Use `dotenv-cli` to load environment variables --- package-lock.json | 50 +++++++++++++++++++------ packages/datahub-data/drizzle.config.ts | 8 +--- packages/datahub-data/package.json | 10 ++--- 3 files changed, 45 insertions(+), 23 deletions(-) diff --git a/package-lock.json b/package-lock.json index ba94151d3..644880fee 100644 --- a/package-lock.json +++ b/package-lock.json @@ -7656,6 +7656,42 @@ "node": ">=12" } }, + "node_modules/dotenv-cli": { + "version": "7.3.0", + "resolved": "https://registry.npmjs.org/dotenv-cli/-/dotenv-cli-7.3.0.tgz", + "integrity": "sha512-314CA4TyK34YEJ6ntBf80eUY+t1XaFLyem1k9P0sX1gn30qThZ5qZr/ZwE318gEnzyYP9yj9HJk6SqwE0upkfw==", + "dev": true, + "dependencies": { + "cross-spawn": "^7.0.3", + "dotenv": "^16.3.0", + "dotenv-expand": "^10.0.0", + "minimist": "^1.2.6" + }, + "bin": { + "dotenv": "cli.js" + } + }, + "node_modules/dotenv-cli/node_modules/dotenv": { + "version": "16.3.1", + "resolved": "https://registry.npmjs.org/dotenv/-/dotenv-16.3.1.tgz", + "integrity": "sha512-IPzF4w4/Rd94bA9imS68tZBaYyBWSCE47V1RGuMrB94iyTOIEwRmVL2x/4An+6mETpLrKJ5hQkB8W4kFAadeIQ==", + "dev": true, + "engines": { + "node": ">=12" + }, + "funding": { + "url": "https://github.com/motdotla/dotenv?sponsor=1" + } + }, + "node_modules/dotenv-expand": { + "version": "10.0.0", + "resolved": "https://registry.npmjs.org/dotenv-expand/-/dotenv-expand-10.0.0.tgz", + "integrity": "sha512-GopVGCpVS1UKH75VKHGuQFqS1Gusej0z4FyQkPdwjil2gNIv+LNsqBlboOzpJFZKVT95GkCyWJbBSdFEFUWI2A==", + "dev": true, + "engines": { + "node": ">=12" + } + }, "node_modules/dreamopt": { "version": "0.8.0", "resolved": "https://registry.npmjs.org/dreamopt/-/dreamopt-0.8.0.tgz", @@ -16722,29 +16758,19 @@ } }, "packages/datahub-data": { + "name": "@colonial-collections/datahub-data", "version": "0.0.0", "dependencies": { - "dotenv": "16.3.1", "drizzle-kit": "0.19.13", "drizzle-orm": "0.28.5", "mysql2": "3.6.0" }, "devDependencies": { + "dotenv-cli": "7.3.0", "eslint-config-custom": "*", "tsconfig": "*" } }, - "packages/datahub-data/node_modules/dotenv": { - "version": "16.3.1", - "resolved": "https://registry.npmjs.org/dotenv/-/dotenv-16.3.1.tgz", - "integrity": "sha512-IPzF4w4/Rd94bA9imS68tZBaYyBWSCE47V1RGuMrB94iyTOIEwRmVL2x/4An+6mETpLrKJ5hQkB8W4kFAadeIQ==", - "engines": { - "node": ">=12" - }, - "funding": { - "url": "https://github.com/motdotla/dotenv?sponsor=1" - } - }, "packages/eslint-config-custom": { "version": "0.0.0", "devDependencies": { diff --git a/packages/datahub-data/drizzle.config.ts b/packages/datahub-data/drizzle.config.ts index 5e21e12c3..bf145a382 100644 --- a/packages/datahub-data/drizzle.config.ts +++ b/packages/datahub-data/drizzle.config.ts @@ -1,15 +1,11 @@ import type {Config} from 'drizzle-kit'; -import * as dotenv from 'dotenv'; - -dotenv.config({ - path: '.env.local', -}); +import {env} from 'node:process'; export default { schema: './src/db/schema.ts', out: './migrations', driver: 'mysql2', dbCredentials: { - connectionString: process.env['DATABASE_URL'] || '', + connectionString: env['DATABASE_URL'] || '', }, } satisfies Config; diff --git a/packages/datahub-data/package.json b/packages/datahub-data/package.json index c5cb9e098..a2117f7d8 100644 --- a/packages/datahub-data/package.json +++ b/packages/datahub-data/package.json @@ -5,17 +5,17 @@ "main": "./src/index.ts", "types": "./src/index.ts", "scripts": { - "db:generate": "drizzle-kit generate:mysql", - "db:push": "drizzle-kit push:mysql", - "db:drop": "drizzle-kit drop", - "db:studio": "drizzle-kit studio" + "db:generate": "dotenv -c -- drizzle-kit generate:mysql", + "db:push": "dotenv -c -- drizzle-kit push:mysql", + "db:drop": "dotenv -c -- drizzle-kit drop", + "db:studio": "dotenv -c -- drizzle-kit studio" }, "devDependencies": { + "dotenv-cli": "7.3.0", "eslint-config-custom": "*", "tsconfig": "*" }, "dependencies": { - "dotenv": "16.3.1", "drizzle-kit": "0.19.13", "drizzle-orm": "0.28.5", "mysql2": "3.6.0" From 10672fd5208f8113edfc3caeef1b2fbe6762261a Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Fri, 15 Sep 2023 16:51:16 +0200 Subject: [PATCH 09/26] Create separate database migrations for the separate tables --- .../migrations/0000_create object_list.sql | 12 ++ ..._lists.sql => 0001_create_object_item.sql} | 14 +- .../migrations/meta/0000_snapshot.json | 77 +------- .../migrations/meta/0001_snapshot.json | 165 ++++++++++++++++++ .../migrations/meta/_journal.json | 11 +- 5 files changed, 188 insertions(+), 91 deletions(-) create mode 100644 packages/datahub-data/migrations/0000_create object_list.sql rename packages/datahub-data/migrations/{0000_initialize_object_lists.sql => 0001_create_object_item.sql} (52%) create mode 100644 packages/datahub-data/migrations/meta/0001_snapshot.json diff --git a/packages/datahub-data/migrations/0000_create object_list.sql b/packages/datahub-data/migrations/0000_create object_list.sql new file mode 100644 index 000000000..2578106e9 --- /dev/null +++ b/packages/datahub-data/migrations/0000_create object_list.sql @@ -0,0 +1,12 @@ +CREATE TABLE `object_list` ( + `id` serial AUTO_INCREMENT NOT NULL, + `name` varchar(256), + `description` text, + `community_id` varchar(256), + `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, + `created_by` varchar(256) NOT NULL, + `updated_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP, + CONSTRAINT `object_list_id` PRIMARY KEY(`id`) +); +--> statement-breakpoint +CREATE INDEX `community_id` ON `object_list` (`community_id`); \ No newline at end of file diff --git a/packages/datahub-data/migrations/0000_initialize_object_lists.sql b/packages/datahub-data/migrations/0001_create_object_item.sql similarity index 52% rename from packages/datahub-data/migrations/0000_initialize_object_lists.sql rename to packages/datahub-data/migrations/0001_create_object_item.sql index 9357bcd56..23096ef14 100644 --- a/packages/datahub-data/migrations/0000_initialize_object_lists.sql +++ b/packages/datahub-data/migrations/0001_create_object_item.sql @@ -8,17 +8,5 @@ CREATE TABLE `object_item` ( CONSTRAINT `object_item_object_id_object_list_id_unique` UNIQUE(`object_id`,`object_list_id`) ); --> statement-breakpoint -CREATE TABLE `object_list` ( - `id` serial AUTO_INCREMENT NOT NULL, - `name` varchar(256), - `description` text, - `community_id` varchar(256), - `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, - `created_by` varchar(256) NOT NULL, - `updated_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP, - CONSTRAINT `object_list_id` PRIMARY KEY(`id`) -); ---> statement-breakpoint CREATE INDEX `object_id` ON `object_item` (`object_id`);--> statement-breakpoint -CREATE INDEX `object_list_id` ON `object_item` (`object_list_id`);--> statement-breakpoint -CREATE INDEX `community_id` ON `object_list` (`community_id`); \ No newline at end of file +CREATE INDEX `object_list_id` ON `object_item` (`object_list_id`); \ No newline at end of file diff --git a/packages/datahub-data/migrations/meta/0000_snapshot.json b/packages/datahub-data/migrations/meta/0000_snapshot.json index 4eec56776..c052f433d 100644 --- a/packages/datahub-data/migrations/meta/0000_snapshot.json +++ b/packages/datahub-data/migrations/meta/0000_snapshot.json @@ -1,84 +1,9 @@ { "version": "5", "dialect": "mysql", - "id": "4703ec87-b3bf-4f7d-99a9-14169d120da1", + "id": "d51c4663-28f7-4309-a2a4-1cdd3472153b", "prevId": "00000000-0000-0000-0000-000000000000", "tables": { - "object_item": { - "name": "object_item", - "columns": { - "id": { - "name": "id", - "type": "serial", - "primaryKey": false, - "notNull": true, - "autoincrement": true - }, - "object_id": { - "name": "object_id", - "type": "varchar(256)", - "primaryKey": false, - "notNull": true, - "autoincrement": false - }, - "object_list_id": { - "name": "object_list_id", - "type": "int", - "primaryKey": false, - "notNull": false, - "autoincrement": false - }, - "created_at": { - "name": "created_at", - "type": "timestamp", - "primaryKey": false, - "notNull": true, - "autoincrement": false, - "default": "CURRENT_TIMESTAMP" - }, - "created_by": { - "name": "created_by", - "type": "varchar(256)", - "primaryKey": false, - "notNull": true, - "autoincrement": false - } - }, - "indexes": { - "object_id": { - "name": "object_id", - "columns": [ - "object_id" - ], - "isUnique": false - }, - "object_list_id": { - "name": "object_list_id", - "columns": [ - "object_list_id" - ], - "isUnique": false - } - }, - "foreignKeys": {}, - "compositePrimaryKeys": { - "object_item_id": { - "name": "object_item_id", - "columns": [ - "id" - ] - } - }, - "uniqueConstraints": { - "object_item_object_id_object_list_id_unique": { - "name": "object_item_object_id_object_list_id_unique", - "columns": [ - "object_id", - "object_list_id" - ] - } - } - }, "object_list": { "name": "object_list", "columns": { diff --git a/packages/datahub-data/migrations/meta/0001_snapshot.json b/packages/datahub-data/migrations/meta/0001_snapshot.json new file mode 100644 index 000000000..2979af802 --- /dev/null +++ b/packages/datahub-data/migrations/meta/0001_snapshot.json @@ -0,0 +1,165 @@ +{ + "version": "5", + "dialect": "mysql", + "id": "bbfe81d2-df8d-49e9-b994-167116622d9d", + "prevId": "d51c4663-28f7-4309-a2a4-1cdd3472153b", + "tables": { + "object_item": { + "name": "object_item", + "columns": { + "id": { + "name": "id", + "type": "serial", + "primaryKey": false, + "notNull": true, + "autoincrement": true + }, + "object_id": { + "name": "object_id", + "type": "varchar(256)", + "primaryKey": false, + "notNull": true, + "autoincrement": false + }, + "object_list_id": { + "name": "object_list_id", + "type": "int", + "primaryKey": false, + "notNull": false, + "autoincrement": false + }, + "created_at": { + "name": "created_at", + "type": "timestamp", + "primaryKey": false, + "notNull": true, + "autoincrement": false, + "default": "CURRENT_TIMESTAMP" + }, + "created_by": { + "name": "created_by", + "type": "varchar(256)", + "primaryKey": false, + "notNull": true, + "autoincrement": false + } + }, + "indexes": { + "object_id": { + "name": "object_id", + "columns": [ + "object_id" + ], + "isUnique": false + }, + "object_list_id": { + "name": "object_list_id", + "columns": [ + "object_list_id" + ], + "isUnique": false + } + }, + "foreignKeys": {}, + "compositePrimaryKeys": { + "object_item_id": { + "name": "object_item_id", + "columns": [ + "id" + ] + } + }, + "uniqueConstraints": { + "object_item_object_id_object_list_id_unique": { + "name": "object_item_object_id_object_list_id_unique", + "columns": [ + "object_id", + "object_list_id" + ] + } + } + }, + "object_list": { + "name": "object_list", + "columns": { + "id": { + "name": "id", + "type": "serial", + "primaryKey": false, + "notNull": true, + "autoincrement": true + }, + "name": { + "name": "name", + "type": "varchar(256)", + "primaryKey": false, + "notNull": false, + "autoincrement": false + }, + "description": { + "name": "description", + "type": "text", + "primaryKey": false, + "notNull": false, + "autoincrement": false + }, + "community_id": { + "name": "community_id", + "type": "varchar(256)", + "primaryKey": false, + "notNull": false, + "autoincrement": false + }, + "created_at": { + "name": "created_at", + "type": "timestamp", + "primaryKey": false, + "notNull": true, + "autoincrement": false, + "default": "CURRENT_TIMESTAMP" + }, + "created_by": { + "name": "created_by", + "type": "varchar(256)", + "primaryKey": false, + "notNull": true, + "autoincrement": false + }, + "updated_at": { + "name": "updated_at", + "type": "timestamp", + "primaryKey": false, + "notNull": true, + "autoincrement": false, + "onUpdate": true, + "default": "CURRENT_TIMESTAMP" + } + }, + "indexes": { + "community_id": { + "name": "community_id", + "columns": [ + "community_id" + ], + "isUnique": false + } + }, + "foreignKeys": {}, + "compositePrimaryKeys": { + "object_list_id": { + "name": "object_list_id", + "columns": [ + "id" + ] + } + }, + "uniqueConstraints": {} + } + }, + "schemas": {}, + "_meta": { + "schemas": {}, + "tables": {}, + "columns": {} + } +} \ No newline at end of file diff --git a/packages/datahub-data/migrations/meta/_journal.json b/packages/datahub-data/migrations/meta/_journal.json index 7878295cf..47204add5 100644 --- a/packages/datahub-data/migrations/meta/_journal.json +++ b/packages/datahub-data/migrations/meta/_journal.json @@ -5,8 +5,15 @@ { "idx": 0, "version": "5", - "when": 1694701696423, - "tag": "0000_initialize_object_lists", + "when": 1694789225065, + "tag": "0000_soft_vengeance", + "breakpoints": true + }, + { + "idx": 1, + "version": "5", + "when": 1694789237912, + "tag": "0001_chunky_killer_shrike", "breakpoints": true } ] From fbb81cc33edee804da716682a406abc9b717a1dc Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Fri, 15 Sep 2023 17:08:32 +0200 Subject: [PATCH 10/26] Move DATABASE_MODE to environment variable --- packages/datahub-data/src/db/connection.ts | 9 +++++++-- 1 file changed, 7 insertions(+), 2 deletions(-) diff --git a/packages/datahub-data/src/db/connection.ts b/packages/datahub-data/src/db/connection.ts index 95746481c..14d7ea986 100644 --- a/packages/datahub-data/src/db/connection.ts +++ b/packages/datahub-data/src/db/connection.ts @@ -1,9 +1,14 @@ +import {Mode} from 'drizzle-orm/mysql-core'; import * as schema from './schema'; import {drizzle} from 'drizzle-orm/mysql2'; import mysql from 'mysql2/promise'; +import {env} from 'node:process'; const poolConnection = mysql.createPool({ - uri: process.env['DATABASE_URL'], + uri: env['DATABASE_URL'], }); -export default drizzle(poolConnection, {schema, mode: 'planetscale'}); +export default drizzle(poolConnection, { + schema, + mode: (env['DATABASE_MODE'] || 'default') as Mode, +}); From 6aad807d19737e409dbf22e9bcf1e738e1c88b48 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Fri, 15 Sep 2023 17:22:59 +0200 Subject: [PATCH 11/26] Validate database insert with drizzle-zod --- package-lock.json | 10 ++++++++++ packages/datahub-data/package.json | 1 + packages/datahub-data/src/actions.ts | 6 ++++-- packages/datahub-data/src/db/schema.ts | 3 +++ 4 files changed, 18 insertions(+), 2 deletions(-) diff --git a/package-lock.json b/package-lock.json index 644880fee..775cfa65d 100644 --- a/package-lock.json +++ b/package-lock.json @@ -7891,6 +7891,15 @@ } } }, + "node_modules/drizzle-zod": { + "version": "0.5.1", + "resolved": "https://registry.npmjs.org/drizzle-zod/-/drizzle-zod-0.5.1.tgz", + "integrity": "sha512-C/8bvzUH/zSnVfwdSibOgFjLhtDtbKYmkbPbUCq46QZyZCH6kODIMSOgZ8R7rVjoI+tCj3k06MRJMDqsIeoS4A==", + "peerDependencies": { + "drizzle-orm": ">=0.23.13", + "zod": "*" + } + }, "node_modules/ecc-jsbn": { "version": "0.1.2", "resolved": "https://registry.npmjs.org/ecc-jsbn/-/ecc-jsbn-0.1.2.tgz", @@ -16763,6 +16772,7 @@ "dependencies": { "drizzle-kit": "0.19.13", "drizzle-orm": "0.28.5", + "drizzle-zod": "0.5.1", "mysql2": "3.6.0" }, "devDependencies": { diff --git a/packages/datahub-data/package.json b/packages/datahub-data/package.json index a2117f7d8..ecb316f3b 100644 --- a/packages/datahub-data/package.json +++ b/packages/datahub-data/package.json @@ -18,6 +18,7 @@ "dependencies": { "drizzle-kit": "0.19.13", "drizzle-orm": "0.28.5", + "drizzle-zod": "0.5.1", "mysql2": "3.6.0" } } diff --git a/packages/datahub-data/src/actions.ts b/packages/datahub-data/src/actions.ts index 089edcd45..bc42a9ba5 100644 --- a/packages/datahub-data/src/actions.ts +++ b/packages/datahub-data/src/actions.ts @@ -1,6 +1,6 @@ 'use server'; -import {objectLists, objectListItems} from './db/schema'; +import {objectLists, insertObjectItemSchema, objectItems} from './db/schema'; import db from './db/connection'; export async function getCommunityLists(communityId: string) { @@ -50,9 +50,11 @@ export async function addObjectToList({ objectId, userId, }: AddObjectToListProps) { - return db.insert(objectListItems).values({ + const objectItem = insertObjectItemSchema.parse({ listId, objectId, createdBy: userId, }); + + return db.insert(objectItems).values(objectItem); } diff --git a/packages/datahub-data/src/db/schema.ts b/packages/datahub-data/src/db/schema.ts index ae1505741..8c782012b 100644 --- a/packages/datahub-data/src/db/schema.ts +++ b/packages/datahub-data/src/db/schema.ts @@ -9,6 +9,7 @@ import { int, } from 'drizzle-orm/mysql-core'; import {sql, relations} from 'drizzle-orm'; +import {createInsertSchema} from 'drizzle-zod'; export const objectLists = mysqlTable( 'object_list', @@ -59,3 +60,5 @@ export const objectItemsRelations = relations(objectItems, ({one}) => ({ references: [objectLists.id], }), })); + +export const insertObjectItemSchema = createInsertSchema(objectItems); From bb954e666ea71e1acdbc5fc77a95571e8d88c9eb Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Sat, 16 Sep 2023 11:25:29 +0200 Subject: [PATCH 12/26] Move object-list actions to one exported object --- packages/datahub-data/src/index.ts | 2 +- .../src/{actions.ts => object-list.ts} | 17 ++++++++++++----- 2 files changed, 13 insertions(+), 6 deletions(-) rename packages/datahub-data/src/{actions.ts => object-list.ts} (73%) diff --git a/packages/datahub-data/src/index.ts b/packages/datahub-data/src/index.ts index 485f1b10a..f070de769 100644 --- a/packages/datahub-data/src/index.ts +++ b/packages/datahub-data/src/index.ts @@ -1 +1 @@ -export * from './actions'; +export {objectList} from './object-list'; diff --git a/packages/datahub-data/src/actions.ts b/packages/datahub-data/src/object-list.ts similarity index 73% rename from packages/datahub-data/src/actions.ts rename to packages/datahub-data/src/object-list.ts index bc42a9ba5..93e450ad6 100644 --- a/packages/datahub-data/src/actions.ts +++ b/packages/datahub-data/src/object-list.ts @@ -3,13 +3,13 @@ import {objectLists, insertObjectItemSchema, objectItems} from './db/schema'; import db from './db/connection'; -export async function getCommunityLists(communityId: string) { +async function getCommunityLists(communityId: string) { return db.query.objectLists.findMany({ where: (objectLists, {eq}) => eq(objectLists.communityId, communityId), }); } -export async function getAllCommunityListsWithObjects(communityId: string) { +async function getAllCommunityListsWithObjects(communityId: string) { return db.query.objectLists.findMany({ where: (objectLists, {eq}) => eq(objectLists.communityId, communityId), with: { @@ -25,7 +25,7 @@ interface CreateListForCommunityProps { description: string; } -export async function createListForCommunity({ +async function createListForCommunity({ communityId, name, description, @@ -39,13 +39,13 @@ export async function createListForCommunity({ }); } -export interface AddObjectToListProps { +interface AddObjectToListProps { listId: number; objectId: string; userId: string; } -export async function addObjectToList({ +async function addObjectToList({ listId, objectId, userId, @@ -58,3 +58,10 @@ export async function addObjectToList({ return db.insert(objectItems).values(objectItem); } + +export const objectList = { + getCommunityLists, + getAllCommunityListsWithObjects, + createListForCommunity, + addObjectToList, +}; From 28d77ed85875e65b3a1bff4e74665ad7bce2cd29 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Tue, 19 Sep 2023 10:28:39 +0200 Subject: [PATCH 13/26] Rename package to @colonial-collections/database --- apps/researcher/package.json | 2 +- package-lock.json | 4795 +++++------------ .../{datahub-data => database}/.eslintrc.js | 0 packages/{datahub-data => database}/README.md | 0 .../drizzle.config.ts | 2 +- .../migrations/0000_create object_list.sql | 0 .../migrations/0001_create_object_item.sql | 0 .../migrations/meta/0000_snapshot.json | 0 .../migrations/meta/0001_snapshot.json | 0 .../migrations/meta/_journal.json | 0 .../{datahub-data => database}/package.json | 2 +- .../src/db/connection.ts | 0 .../src/db/schema.ts | 0 .../{datahub-data => database}/src/index.ts | 0 .../src/object-list.ts | 0 .../{datahub-data => database}/tsconfig.json | 0 16 files changed, 1469 insertions(+), 3332 deletions(-) rename packages/{datahub-data => database}/.eslintrc.js (100%) rename packages/{datahub-data => database}/README.md (100%) rename packages/{datahub-data => database}/drizzle.config.ts (81%) rename packages/{datahub-data => database}/migrations/0000_create object_list.sql (100%) rename packages/{datahub-data => database}/migrations/0001_create_object_item.sql (100%) rename packages/{datahub-data => database}/migrations/meta/0000_snapshot.json (100%) rename packages/{datahub-data => database}/migrations/meta/0001_snapshot.json (100%) rename packages/{datahub-data => database}/migrations/meta/_journal.json (100%) rename packages/{datahub-data => database}/package.json (92%) rename packages/{datahub-data => database}/src/db/connection.ts (100%) rename packages/{datahub-data => database}/src/db/schema.ts (100%) rename packages/{datahub-data => database}/src/index.ts (100%) rename packages/{datahub-data => database}/src/object-list.ts (100%) rename packages/{datahub-data => database}/tsconfig.json (100%) diff --git a/apps/researcher/package.json b/apps/researcher/package.json index a921eb1ef..f312c0ea1 100644 --- a/apps/researcher/package.json +++ b/apps/researcher/package.json @@ -35,7 +35,7 @@ "fetch-sparql-endpoint": "3.3.3", "next": "13.4.7", "next-intl": "3.0.0-beta.7", - "@colonial-collections/datahub-data": "*", + "@colonial-collections/database": "*", "openseadragon": "4.1.0", "rdf-object": "1.14.0", "react": "18.2.0", diff --git a/package-lock.json b/package-lock.json index 775cfa65d..35b3f6390 100644 --- a/package-lock.json +++ b/package-lock.json @@ -69,8 +69,7 @@ }, "apps/dataset-browser/node_modules/zod": { "version": "3.22.2", - "resolved": "https://registry.npmjs.org/zod/-/zod-3.22.2.tgz", - "integrity": "sha512-wvWkphh5WQsJbVk1tbx1l1Ly4yg+XecD+Mq280uBGt9wa5BKSWf4Mhp6GmrkPixhMxmabYY7RbzlwVP32pbGCg==", + "license": "MIT", "funding": { "url": "https://github.com/sponsors/colinhacks" } @@ -82,7 +81,7 @@ "@clerk/nextjs": "4.23.2", "@clerk/types": "3.51.0", "@colonial-collections/content": "*", - "@colonial-collections/datahub-data": "*", + "@colonial-collections/database": "*", "@colonial-collections/iris": "*", "@colonial-collections/label-fetcher": "*", "@colonial-collections/list-store": "*", @@ -135,25 +134,22 @@ }, "apps/researcher/node_modules/zod": { "version": "3.22.2", - "resolved": "https://registry.npmjs.org/zod/-/zod-3.22.2.tgz", - "integrity": "sha512-wvWkphh5WQsJbVk1tbx1l1Ly4yg+XecD+Mq280uBGt9wa5BKSWf4Mhp6GmrkPixhMxmabYY7RbzlwVP32pbGCg==", + "license": "MIT", "funding": { "url": "https://github.com/sponsors/colinhacks" } }, "node_modules/@aashutoshrathi/word-wrap": { "version": "1.2.6", - "resolved": "https://registry.npmjs.org/@aashutoshrathi/word-wrap/-/word-wrap-1.2.6.tgz", - "integrity": "sha512-1Yjs2SvM8TflER/OD3cOjhWWOZb58A2t7wpE2S9XfBYTiIl+XFhQG2bjy4Pu1I+EAlCNUzRDYDdFwFYUKvXcIA==", "dev": true, + "license": "MIT", "engines": { "node": ">=0.10.0" } }, "node_modules/@alloc/quick-lru": { "version": "5.2.0", - 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"https://registry.npmjs.org/wordwrap/-/wordwrap-1.0.0.tgz", - "integrity": "sha512-gvVzJFlPycKc5dZN4yPkP8w7Dc37BtP1yczEneOb4uq34pXZcvrtRTmWV8W+Ume+XCxKgbjM+nevkyFPMybd4Q==" + "license": "MIT" }, "node_modules/wrap-ansi": { "version": "7.0.0", - "resolved": "https://registry.npmjs.org/wrap-ansi/-/wrap-ansi-7.0.0.tgz", - "integrity": "sha512-YVGIj2kamLSTxw6NsZjoBxfSwsn0ycdesmc4p+Q21c5zPuZ1pl+NfxVdxPtdHvmNVOQ6XSYG4AUtyt/Fi7D16Q==", "dev": true, + "license": "MIT", "dependencies": { "ansi-styles": "^4.0.0", "string-width": "^4.1.0", @@ -16597,14 +14764,12 @@ }, "node_modules/wrappy": { "version": "1.0.2", - "resolved": "https://registry.npmjs.org/wrappy/-/wrappy-1.0.2.tgz", - "integrity": "sha512-l4Sp/DRseor9wL6EvV2+TuQn63dMkPjZ/sp9XkghTEbV9KlPS1xUsZ3u7/IQO4wxtcFB4bgpQPRcR3QCvezPcQ==" + "license": "ISC" }, "node_modules/write-file-atomic": { "version": "4.0.2", - "resolved": "https://registry.npmjs.org/write-file-atomic/-/write-file-atomic-4.0.2.tgz", - "integrity": "sha512-7KxauUdBmSdWnmpaGFg+ppNjKF8uNLry8LyzjauQDOVONfFLNKrKvQOxZ/VuTIcS/gge/YNahf5RIIQWTSarlg==", "dev": true, + "license": "ISC", "dependencies": { "imurmurhash": "^0.1.4", "signal-exit": "^3.0.7" @@ -16615,8 +14780,7 @@ }, "node_modules/ws": { "version": "8.13.0", - "resolved": "https://registry.npmjs.org/ws/-/ws-8.13.0.tgz", - "integrity": "sha512-x9vcZYTrFPC7aSIbj7sRCYo7L/Xb8Iy+pW0ng0wt2vCJv7M9HOMy0UoN3rr+IFC7hb7vXoqS+P9ktyLLLhO+LA==", + "license": "MIT", "engines": { "node": ">=10.0.0" }, @@ -16635,45 +14799,39 @@ }, "node_modules/xml-name-validator": { "version": "4.0.0", - "resolved": "https://registry.npmjs.org/xml-name-validator/-/xml-name-validator-4.0.0.tgz", - "integrity": "sha512-ICP2e+jsHvAj2E2lIHxa5tjXRlKDJo4IdvPvCXbXQGdzSfmSpNVyIKMvoZHjDY9DP0zV17iI85o90vRFXNccRw==", + "license": "Apache-2.0", "engines": { "node": ">=12" } }, "node_modules/xmlchars": { "version": "2.2.0", - "resolved": "https://registry.npmjs.org/xmlchars/-/xmlchars-2.2.0.tgz", - "integrity": "sha512-JZnDKK8B0RCDw84FNdDAIpZK+JuJw+s7Lz8nksI7SIuU3UXJJslUthsi+uWBUYOwPFwW7W7PRLRfUKpxjtjFCw==" + "license": "MIT" }, "node_modules/y18n": { "version": "5.0.8", - "resolved": "https://registry.npmjs.org/y18n/-/y18n-5.0.8.tgz", - "integrity": "sha512-0pfFzegeDWJHJIAmTLRP2DwHjdF5s7jo9tuztdQxAhINCdvS+3nGINqPd00AphqJR/0LhANUS6/+7SCb98YOfA==", "dev": true, + "license": "ISC", "engines": { "node": ">=10" } }, "node_modules/yallist": { "version": "4.0.0", - "resolved": "https://registry.npmjs.org/yallist/-/yallist-4.0.0.tgz", - "integrity": "sha512-3wdGidZyq5PB084XLES5TpOSRA3wjXAlIWMhum2kRcv/41Sn2emQ0dycQW4uZXLejwKvg6EsvbdlVL+FYEct7A==", - "dev": true + "dev": true, + "license": "ISC" }, "node_modules/yaml": { "version": "2.2.2", - "resolved": "https://registry.npmjs.org/yaml/-/yaml-2.2.2.tgz", - "integrity": "sha512-CBKFWExMn46Foo4cldiChEzn7S7SRV+wqiluAb6xmueD/fGyRHIhX8m14vVGgeFWjN540nKCNVj6P21eQjgTuA==", + "license": "ISC", "engines": { "node": ">= 14" } }, "node_modules/yargs": { "version": "17.7.2", - "resolved": "https://registry.npmjs.org/yargs/-/yargs-17.7.2.tgz", - "integrity": "sha512-7dSzzRQ++CKnNI/krKnYRV7JKKPUXMEh61soaHKg9mrWEhzFWhFnxPxGl+69cD1Ou63C13NUPCnmIcrvqCuM6w==", "dev": true, + "license": "MIT", "dependencies": { "cliui": "^8.0.1", "escalade": "^3.1.1", @@ -16689,27 +14847,24 @@ }, "node_modules/yargs-parser": { "version": "20.2.9", - "resolved": "https://registry.npmjs.org/yargs-parser/-/yargs-parser-20.2.9.tgz", - "integrity": "sha512-y11nGElTIV+CT3Zv9t7VKl+Q3hTQoT9a1Qzezhhl6Rp21gJ/IVTW7Z3y9EWXhuUBC2Shnf+DX0antecpAwSP8w==", "dev": true, + "license": "ISC", "engines": { "node": ">=10" } }, "node_modules/yargs/node_modules/yargs-parser": { "version": "21.1.1", - "resolved": "https://registry.npmjs.org/yargs-parser/-/yargs-parser-21.1.1.tgz", - "integrity": "sha512-tVpsJW7DdjecAiFpbIB1e3qxIQsE6NoPc5/eTdrbbIC4h0LVsWhnoa3g+m2HclBIujHzsxZ4VJVA+GUuc2/LBw==", "dev": true, + "license": "ISC", "engines": { "node": ">=12" } }, "node_modules/yauzl": { "version": "2.10.0", - "resolved": "https://registry.npmjs.org/yauzl/-/yauzl-2.10.0.tgz", - "integrity": "sha512-p4a9I6X6nu6IhoGmBqAcbJy1mlC4j27vEPZX9F4L4/vZT3Lyq1VkFHw/V/PUcB9Buo+DG3iHkT0x3Qya58zc3g==", "dev": true, + "license": "MIT", "dependencies": { "buffer-crc32": "~0.2.3", "fd-slicer": "~1.1.0" @@ -16717,9 +14872,8 @@ }, "node_modules/yocto-queue": { "version": "0.1.0", - "resolved": "https://registry.npmjs.org/yocto-queue/-/yocto-queue-0.1.0.tgz", - "integrity": "sha512-rVksvsnNCdJ/ohGc6xgPwyN8eheCxsiLM8mxuE/t/mOVqJewPuO1miLpTHQiRgTKCLexL4MeAFVagts7HmNZ2Q==", "dev": true, + "license": "MIT", "engines": { "node": ">=10" }, @@ -16729,16 +14883,14 @@ }, "node_modules/zod": { "version": "3.21.4", - "resolved": "https://registry.npmjs.org/zod/-/zod-3.21.4.tgz", - "integrity": "sha512-m46AKbrzKVzOzs/DZgVnG5H55N1sv1M8qZU3A8RIKbs3mrACDNeIOeilDymVb2HdmP8uwshOCF4uJ8uM9rCqJw==", + "license": "MIT", "funding": { "url": "https://github.com/sponsors/colinhacks" } }, "node_modules/zustand": { "version": "4.3.9", - "resolved": "https://registry.npmjs.org/zustand/-/zustand-4.3.9.tgz", - "integrity": "sha512-Tat5r8jOMG1Vcsj8uldMyqYKC5IZvQif8zetmLHs9WoZlntTHmIoNM8TpLRY31ExncuUvUOXehd0kvahkuHjDw==", + "license": "MIT", "dependencies": { "use-sync-external-store": "1.2.0" }, @@ -16767,7 +14919,7 @@ } }, "packages/datahub-data": { - "name": "@colonial-collections/datahub-data", + "name": "@colonial-collections/database", "version": "0.0.0", "dependencies": { "drizzle-kit": "0.19.13", @@ -16815,8 +14967,7 @@ }, "packages/iris/node_modules/zod": { "version": "3.22.2", - "resolved": "https://registry.npmjs.org/zod/-/zod-3.22.2.tgz", - "integrity": "sha512-wvWkphh5WQsJbVk1tbx1l1Ly4yg+XecD+Mq280uBGt9wa5BKSWf4Mhp6GmrkPixhMxmabYY7RbzlwVP32pbGCg==", + "license": "MIT", "funding": { "url": "https://github.com/sponsors/colinhacks" } @@ -16848,8 +14999,7 @@ }, "packages/label-fetcher/node_modules/zod": { "version": "3.22.2", - "resolved": "https://registry.npmjs.org/zod/-/zod-3.22.2.tgz", - "integrity": "sha512-wvWkphh5WQsJbVk1tbx1l1Ly4yg+XecD+Mq280uBGt9wa5BKSWf4Mhp6GmrkPixhMxmabYY7RbzlwVP32pbGCg==", + "license": "MIT", "funding": { "url": "https://github.com/sponsors/colinhacks" } @@ -16877,26 +15027,13 @@ }, "packages/list-store/node_modules/zod": { "version": "3.22.2", - "resolved": "https://registry.npmjs.org/zod/-/zod-3.22.2.tgz", - "integrity": "sha512-wvWkphh5WQsJbVk1tbx1l1Ly4yg+XecD+Mq280uBGt9wa5BKSWf4Mhp6GmrkPixhMxmabYY7RbzlwVP32pbGCg==", + "license": "MIT", "funding": { "url": "https://github.com/sponsors/colinhacks" } }, "packages/object-lists": { - "name": "@colonial-collections/datahub-data", - "version": "0.0.0", - "extraneous": true, - "dependencies": { - "dotenv": "16.3.1", - "drizzle-kit": "0.19.13", - "drizzle-orm": "0.28.5", - "mysql2": "3.6.0" - }, - "devDependencies": { - "eslint-config-custom": "*", - "tsconfig": "*" - } + "extraneous": true }, "packages/tailwind-config": { "version": "0.0.0", diff --git a/packages/datahub-data/.eslintrc.js b/packages/database/.eslintrc.js similarity index 100% rename from packages/datahub-data/.eslintrc.js rename to packages/database/.eslintrc.js diff --git a/packages/datahub-data/README.md b/packages/database/README.md similarity index 100% rename from packages/datahub-data/README.md rename to packages/database/README.md diff --git a/packages/datahub-data/drizzle.config.ts b/packages/database/drizzle.config.ts similarity index 81% rename from packages/datahub-data/drizzle.config.ts rename to packages/database/drizzle.config.ts index bf145a382..cabbde392 100644 --- a/packages/datahub-data/drizzle.config.ts +++ b/packages/database/drizzle.config.ts @@ -6,6 +6,6 @@ export default { out: './migrations', driver: 'mysql2', dbCredentials: { - connectionString: env['DATABASE_URL'] || '', + connectionString: env.DATABASE_URL || '', }, } satisfies Config; diff --git a/packages/datahub-data/migrations/0000_create object_list.sql b/packages/database/migrations/0000_create object_list.sql similarity index 100% rename from packages/datahub-data/migrations/0000_create object_list.sql rename to packages/database/migrations/0000_create object_list.sql diff --git a/packages/datahub-data/migrations/0001_create_object_item.sql b/packages/database/migrations/0001_create_object_item.sql similarity index 100% rename from packages/datahub-data/migrations/0001_create_object_item.sql rename to packages/database/migrations/0001_create_object_item.sql diff --git a/packages/datahub-data/migrations/meta/0000_snapshot.json b/packages/database/migrations/meta/0000_snapshot.json similarity index 100% rename from packages/datahub-data/migrations/meta/0000_snapshot.json rename to packages/database/migrations/meta/0000_snapshot.json diff --git a/packages/datahub-data/migrations/meta/0001_snapshot.json b/packages/database/migrations/meta/0001_snapshot.json similarity index 100% rename from packages/datahub-data/migrations/meta/0001_snapshot.json rename to packages/database/migrations/meta/0001_snapshot.json diff --git a/packages/datahub-data/migrations/meta/_journal.json b/packages/database/migrations/meta/_journal.json similarity index 100% rename from packages/datahub-data/migrations/meta/_journal.json rename to packages/database/migrations/meta/_journal.json diff --git a/packages/datahub-data/package.json b/packages/database/package.json similarity index 92% rename from packages/datahub-data/package.json rename to packages/database/package.json index ecb316f3b..ebeb76c47 100644 --- a/packages/datahub-data/package.json +++ b/packages/database/package.json @@ -1,5 +1,5 @@ { - "name": "@colonial-collections/datahub-data", + "name": "@colonial-collections/database", "version": "0.0.0", "private": true, "main": "./src/index.ts", diff --git a/packages/datahub-data/src/db/connection.ts b/packages/database/src/db/connection.ts similarity index 100% rename from packages/datahub-data/src/db/connection.ts rename to packages/database/src/db/connection.ts diff --git a/packages/datahub-data/src/db/schema.ts b/packages/database/src/db/schema.ts similarity index 100% rename from packages/datahub-data/src/db/schema.ts rename to packages/database/src/db/schema.ts diff --git a/packages/datahub-data/src/index.ts b/packages/database/src/index.ts similarity index 100% rename from packages/datahub-data/src/index.ts rename to packages/database/src/index.ts diff --git a/packages/datahub-data/src/object-list.ts b/packages/database/src/object-list.ts similarity index 100% rename from packages/datahub-data/src/object-list.ts rename to packages/database/src/object-list.ts diff --git a/packages/datahub-data/tsconfig.json b/packages/database/tsconfig.json similarity index 100% rename from packages/datahub-data/tsconfig.json rename to packages/database/tsconfig.json From caace04b8a946e7464f81216874ac357b00d163e Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Tue, 19 Sep 2023 10:48:18 +0200 Subject: [PATCH 14/26] Update database schema and migrations --- ...ate object_list.sql => 0000_create_object_list.sql} | 2 +- .../database/migrations/0001_create_object_item.sql | 4 ++-- packages/database/migrations/meta/0000_snapshot.json | 4 ++-- packages/database/migrations/meta/0001_snapshot.json | 10 +++++----- packages/database/migrations/meta/_journal.json | 8 ++++---- packages/database/src/db/schema.ts | 10 +++++++--- 6 files changed, 21 insertions(+), 17 deletions(-) rename packages/database/migrations/{0000_create object_list.sql => 0000_create_object_list.sql} (93%) diff --git a/packages/database/migrations/0000_create object_list.sql b/packages/database/migrations/0000_create_object_list.sql similarity index 93% rename from packages/database/migrations/0000_create object_list.sql rename to packages/database/migrations/0000_create_object_list.sql index 2578106e9..fd205c3e5 100644 --- a/packages/database/migrations/0000_create object_list.sql +++ b/packages/database/migrations/0000_create_object_list.sql @@ -2,7 +2,7 @@ CREATE TABLE `object_list` ( `id` serial AUTO_INCREMENT NOT NULL, `name` varchar(256), `description` text, - `community_id` varchar(256), + `community_id` varchar(50), `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, `created_by` varchar(256) NOT NULL, `updated_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP ON UPDATE CURRENT_TIMESTAMP, diff --git a/packages/database/migrations/0001_create_object_item.sql b/packages/database/migrations/0001_create_object_item.sql index 23096ef14..2b2f7d9dc 100644 --- a/packages/database/migrations/0001_create_object_item.sql +++ b/packages/database/migrations/0001_create_object_item.sql @@ -1,9 +1,9 @@ CREATE TABLE `object_item` ( `id` serial AUTO_INCREMENT NOT NULL, - `object_id` varchar(256) NOT NULL, + `object_id` text NOT NULL, `object_list_id` int, `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, - `created_by` varchar(256) NOT NULL, + `created_by` varchar(50) NOT NULL, CONSTRAINT `object_item_id` PRIMARY KEY(`id`), CONSTRAINT `object_item_object_id_object_list_id_unique` UNIQUE(`object_id`,`object_list_id`) ); diff --git a/packages/database/migrations/meta/0000_snapshot.json b/packages/database/migrations/meta/0000_snapshot.json index c052f433d..a8d7351b1 100644 --- a/packages/database/migrations/meta/0000_snapshot.json +++ b/packages/database/migrations/meta/0000_snapshot.json @@ -1,7 +1,7 @@ { "version": "5", "dialect": "mysql", - "id": "d51c4663-28f7-4309-a2a4-1cdd3472153b", + "id": "4ce42ab4-fdff-449e-9757-1afe2d24c8ff", "prevId": "00000000-0000-0000-0000-000000000000", "tables": { "object_list": { @@ -30,7 +30,7 @@ }, "community_id": { "name": "community_id", - "type": "varchar(256)", + "type": "varchar(50)", "primaryKey": false, "notNull": false, "autoincrement": false diff --git a/packages/database/migrations/meta/0001_snapshot.json b/packages/database/migrations/meta/0001_snapshot.json index 2979af802..0e4c42da9 100644 --- a/packages/database/migrations/meta/0001_snapshot.json +++ b/packages/database/migrations/meta/0001_snapshot.json @@ -1,8 +1,8 @@ { "version": "5", "dialect": "mysql", - "id": "bbfe81d2-df8d-49e9-b994-167116622d9d", - "prevId": "d51c4663-28f7-4309-a2a4-1cdd3472153b", + "id": "bb5484fc-0270-4cab-be00-c4879c8e2539", + "prevId": "4ce42ab4-fdff-449e-9757-1afe2d24c8ff", "tables": { "object_item": { "name": "object_item", @@ -16,7 +16,7 @@ }, "object_id": { "name": "object_id", - "type": "varchar(256)", + "type": "text", "primaryKey": false, "notNull": true, "autoincrement": false @@ -38,7 +38,7 @@ }, "created_by": { "name": "created_by", - "type": "varchar(256)", + "type": "varchar(50)", "primaryKey": false, "notNull": true, "autoincrement": false @@ -105,7 +105,7 @@ }, "community_id": { "name": "community_id", - "type": "varchar(256)", + "type": "varchar(50)", "primaryKey": false, "notNull": false, "autoincrement": false diff --git a/packages/database/migrations/meta/_journal.json b/packages/database/migrations/meta/_journal.json index 47204add5..bca389800 100644 --- a/packages/database/migrations/meta/_journal.json +++ b/packages/database/migrations/meta/_journal.json @@ -5,15 +5,15 @@ { "idx": 0, "version": "5", - "when": 1694789225065, - "tag": "0000_soft_vengeance", + "when": 1695113713084, + "tag": "0000_create_object_list", "breakpoints": true }, { "idx": 1, "version": "5", - "when": 1694789237912, - "tag": "0001_chunky_killer_shrike", + "when": 1695113728187, + "tag": "0001_create_object_item", "breakpoints": true } ] diff --git a/packages/database/src/db/schema.ts b/packages/database/src/db/schema.ts index 8c782012b..2e8d2643b 100644 --- a/packages/database/src/db/schema.ts +++ b/packages/database/src/db/schema.ts @@ -17,7 +17,7 @@ export const objectLists = mysqlTable( id: serial('id').primaryKey(), name: varchar('name', {length: 256}), description: text('description'), - communityId: varchar('community_id', {length: 256}), + communityId: varchar('community_id', {length: 50}), createdAt: timestamp('created_at') .default(sql`CURRENT_TIMESTAMP`) .notNull(), @@ -40,12 +40,16 @@ export const objectItems = mysqlTable( 'object_item', { id: serial('id').primaryKey(), - objectId: varchar('object_id', {length: 256}).notNull(), + // The objectId is a uri, so it can be long. + objectId: text('object_id').notNull(), objectListId: int('object_list_id'), createdAt: timestamp('created_at') .default(sql`CURRENT_TIMESTAMP`) .notNull(), - createdBy: varchar('created_by', {length: 256}).notNull(), + // James from Clerk about the length of the user ID: You should store it to 50, but currently, + // they are 32 and shouldn’t need to grow in length as they are a UUID based, + // but you should increase it slightly just to be cautious. + createdBy: varchar('created_by', {length: 50}).notNull(), }, item => ({ objectId: index('object_id').on(item.objectId), From 56ff8373b2e93d4f92f5591e7a739aec75165e3a Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Tue, 19 Sep 2023 11:01:48 +0200 Subject: [PATCH 15/26] rename functions --- packages/database/src/object-list.ts | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/packages/database/src/object-list.ts b/packages/database/src/object-list.ts index 93e450ad6..a76c6dc42 100644 --- a/packages/database/src/object-list.ts +++ b/packages/database/src/object-list.ts @@ -3,13 +3,13 @@ import {objectLists, insertObjectItemSchema, objectItems} from './db/schema'; import db from './db/connection'; -async function getCommunityLists(communityId: string) { +async function getListsByCommunityId(communityId: string) { return db.query.objectLists.findMany({ where: (objectLists, {eq}) => eq(objectLists.communityId, communityId), }); } -async function getAllCommunityListsWithObjects(communityId: string) { +async function getCommunityListsWithObjects(communityId: string) { return db.query.objectLists.findMany({ where: (objectLists, {eq}) => eq(objectLists.communityId, communityId), with: { @@ -60,8 +60,8 @@ async function addObjectToList({ } export const objectList = { - getCommunityLists, - getAllCommunityListsWithObjects, + getListsByCommunityId, + getCommunityListsWithObjects, createListForCommunity, addObjectToList, }; From 412a8d05c616f423b6d303658ebd7efe54c4079f Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Tue, 19 Sep 2023 11:54:04 +0200 Subject: [PATCH 16/26] Add a db:create script --- packages/database/package.json | 3 ++- packages/database/scripts/create-database.sh | 16 ++++++++++++++++ 2 files changed, 18 insertions(+), 1 deletion(-) create mode 100644 packages/database/scripts/create-database.sh diff --git a/packages/database/package.json b/packages/database/package.json index ebeb76c47..405fde731 100644 --- a/packages/database/package.json +++ b/packages/database/package.json @@ -8,7 +8,8 @@ "db:generate": "dotenv -c -- drizzle-kit generate:mysql", "db:push": "dotenv -c -- drizzle-kit push:mysql", "db:drop": "dotenv -c -- drizzle-kit drop", - "db:studio": "dotenv -c -- drizzle-kit studio" + "db:studio": "dotenv -c -- drizzle-kit studio", + "db:create": "bash ./scripts/create-database.sh" }, "devDependencies": { "dotenv-cli": "7.3.0", diff --git a/packages/database/scripts/create-database.sh b/packages/database/scripts/create-database.sh new file mode 100644 index 000000000..3f9822451 --- /dev/null +++ b/packages/database/scripts/create-database.sh @@ -0,0 +1,16 @@ +#!/bin/bash + +read -p "What is the mysql docker container name? [mysql]: " container_name +container_name=${container_name:-mysql} + +read -p "What is the new database name? [datahub_development]: " database_name +database_name=${database_name:-datahub_development} + +read -p "What is the mysql username? [root]: " user_name +user_name=${user_name:-root} + +read -p "What is the mysql password?: " password + +docker exec ${container_name} mysql -u ${user_name} -p${password} -e "CREATE DATABASE ${database_name};" && +echo "Database created successfully" && +echo "DATABASE_URL='mysql://${user_name}:${password}@localhost:3306/${database_name}'" \ No newline at end of file From 34372e6ced597fa79398f69f251015f415f8c7a7 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Tue, 19 Sep 2023 11:54:13 +0200 Subject: [PATCH 17/26] Update readme --- README.md | 1 - packages/database/README.md | 15 +++++---------- 2 files changed, 5 insertions(+), 11 deletions(-) diff --git a/README.md b/README.md index 4f5eb2211..0b9cff0d2 100644 --- a/README.md +++ b/README.md @@ -72,7 +72,6 @@ Then run: Add `DATABASE_URL` environment variable to the file `apps/researcher/.env.local`. More information about connecting to the database is in the [datahub-data readme](packages/datahub-data/README.md). - ### Install packages docker run --rm -it -v "$PWD":/app -w /app node:18 npm install --no-progress diff --git a/packages/database/README.md b/packages/database/README.md index 2b14575ad..b2f0ff42c 100644 --- a/packages/database/README.md +++ b/packages/database/README.md @@ -1,14 +1,10 @@ -# Datahub data +# Datahub database This package is the database connector needed to read and write Datahub data. To connect to the database via the researcher app, ensure the environment variable DATABASE_URL is set in `apps/researcher/.env.local`. If you want to connect to the database outside the app to run scripts, add the DATABASE_URL to `packages/datahub-data/.env.local`. -# Option 1: Connecting with PlanetScale +# Connecting to the local MySQL database with docker. -Connecting to the PlanetScale development database is the easiest option. You can find the needed DATABASE_URL in Vercel. - -# Option 2: Connecting with a local MySQL database (docker). - -You can also create a MySQL database with docker if you prefer using a local database. Use the following command to start your MySQL container. It will create a new Docker volume called MySQL. +You can create a MySQL database with docker. Use the following command to start your MySQL container. It will create a new Docker volume called MySQL. docker run --name mysql -d \ -p 3306:3306 \ @@ -20,8 +16,7 @@ More commands can be found in the helpful blog [How to Use Docker for Your MySQL Create a new database with: - docker exec -it mysql mysql -p - mysql> CREATE DATABASE local_database_name + npm run db:create -w @colonial-collections/database Set the DATABASE_URL to: @@ -29,7 +24,7 @@ Set the DATABASE_URL to: # Schema migrations -Whenever you make changes to the db schema in `src/db/schema`, you need to run `npm run db:generate`, which will generate a SQL migration file for you. +Whenever you make changes to the database schema in `src/db/schema`, you need to run `npm run db:generate`, which will generate a SQL migration file for you. To push the changes to your local database, run `npm run db:push`. From 777dfa312dcd2bf506f500c52ba187b135685542 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Tue, 19 Sep 2023 12:04:44 +0200 Subject: [PATCH 18/26] Update package-lock.json --- package-lock.json | 17 ++++++++++++++++- 1 file changed, 16 insertions(+), 1 deletion(-) diff --git a/package-lock.json b/package-lock.json index 35b3f6390..64caf998e 100644 --- a/package-lock.json +++ b/package-lock.json @@ -993,7 +993,7 @@ "link": true }, "node_modules/@colonial-collections/database": { - "resolved": "packages/datahub-data", + "resolved": "packages/database", "link": true }, "node_modules/@colonial-collections/iris": { @@ -14918,9 +14918,24 @@ "node": "18.x" } }, + "packages/database": { + "version": "0.0.0", + "dependencies": { + "drizzle-kit": "0.19.13", + "drizzle-orm": "0.28.5", + "drizzle-zod": "0.5.1", + "mysql2": "3.6.0" + }, + "devDependencies": { + "dotenv-cli": "7.3.0", + "eslint-config-custom": "*", + "tsconfig": "*" + } + }, "packages/datahub-data": { "name": "@colonial-collections/database", "version": "0.0.0", + "extraneous": true, "dependencies": { "drizzle-kit": "0.19.13", "drizzle-orm": "0.28.5", From 97a827b319c4d53d4f00a46c780767d3c6df4c03 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Tue, 19 Sep 2023 12:17:26 +0200 Subject: [PATCH 19/26] Rename 'datahub-data' to 'database' everywhere --- .../database-merge-and-deploy-schema-changes.yml | 2 +- .github/workflows/database-migrate.yml | 2 +- README.md | 2 +- package-lock.json | 15 --------------- packages/database/README.md | 6 +++--- 5 files changed, 6 insertions(+), 21 deletions(-) diff --git a/.github/workflows/database-merge-and-deploy-schema-changes.yml b/.github/workflows/database-merge-and-deploy-schema-changes.yml index a46912390..325113bea 100644 --- a/.github/workflows/database-merge-and-deploy-schema-changes.yml +++ b/.github/workflows/database-merge-and-deploy-schema-changes.yml @@ -3,7 +3,7 @@ on: pull_request: branches: ["main"] types: [closed] - paths: ["packages/datahub-data/migrations/**"] + paths: ["packages/database/migrations/**"] jobs: merge_changes: diff --git a/.github/workflows/database-migrate.yml b/.github/workflows/database-migrate.yml index 035277699..b83545561 100644 --- a/.github/workflows/database-migrate.yml +++ b/.github/workflows/database-migrate.yml @@ -3,7 +3,7 @@ name: Migrate database on: pull_request: branches: ["main"] - paths: ["packages/datahub-data/migrations/**"] + paths: ["packages/database/migrations/**"] jobs: migrate: diff --git a/README.md b/README.md index 0b9cff0d2..cb7537a6c 100644 --- a/README.md +++ b/README.md @@ -70,7 +70,7 @@ Then run: ### Connecting to the MySQL server -Add `DATABASE_URL` environment variable to the file `apps/researcher/.env.local`. More information about connecting to the database is in the [datahub-data readme](packages/datahub-data/README.md). +Add `DATABASE_URL` environment variable to the file `apps/researcher/.env.local`. More information about connecting to the database is in the [database readme](packages/database/README.md). ### Install packages diff --git a/package-lock.json b/package-lock.json index 64caf998e..526e4dc89 100644 --- a/package-lock.json +++ b/package-lock.json @@ -14919,23 +14919,8 @@ } }, "packages/database": { - "version": "0.0.0", - "dependencies": { - "drizzle-kit": "0.19.13", - "drizzle-orm": "0.28.5", - "drizzle-zod": "0.5.1", - "mysql2": "3.6.0" - }, - "devDependencies": { - "dotenv-cli": "7.3.0", - "eslint-config-custom": "*", - "tsconfig": "*" - } - }, - "packages/datahub-data": { "name": "@colonial-collections/database", "version": "0.0.0", - "extraneous": true, "dependencies": { "drizzle-kit": "0.19.13", "drizzle-orm": "0.28.5", diff --git a/packages/database/README.md b/packages/database/README.md index b2f0ff42c..61a967ddd 100644 --- a/packages/database/README.md +++ b/packages/database/README.md @@ -1,6 +1,6 @@ # Datahub database -This package is the database connector needed to read and write Datahub data. To connect to the database via the researcher app, ensure the environment variable DATABASE_URL is set in `apps/researcher/.env.local`. If you want to connect to the database outside the app to run scripts, add the DATABASE_URL to `packages/datahub-data/.env.local`. +This package is the database connector needed to read and write Datahub data. To connect to the database via the researcher app, ensure the environment variable DATABASE_URL is set in `apps/researcher/.env.local`. If you want to connect to the database outside the app to run scripts, add the DATABASE_URL to `packages/database/.env.local`. # Connecting to the local MySQL database with docker. @@ -20,7 +20,7 @@ Create a new database with: Set the DATABASE_URL to: - DATABASE_URL='mysql://root:{password}@localhost:3306/{database_name}' + DATABASE_URL='mysql://root:{password}@localhost:3306/{database_name}' # Schema migrations @@ -30,4 +30,4 @@ To push the changes to your local database, run `npm run db:push`. # Drizzle Studio -With Drizzle Studio, you can explore the SQL database. Depending on the DATABASE_URL, you can explore both local and PlanetScale databases. Open Drizzle Studio with `npm run db:studio -w datahub-data`. +With Drizzle Studio, you can explore the SQL database. Depending on the DATABASE_URL, you can explore both local and PlanetScale databases. Open Drizzle Studio with `npm run db:studio -w @colonial-collections/database`. From bdb6b183dc148249424acaa17f22ffed38fb890f Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Wed, 20 Sep 2023 10:15:31 +0200 Subject: [PATCH 20/26] Move database migration to separate script --- .github/workflows/database-migrate.yml | 2 +- package-lock.json | 130 ++++++++++++++++++++++++- package.json | 2 +- packages/database/README.md | 2 +- packages/database/package.json | 3 +- packages/database/scripts/migrate.ts | 17 ++++ turbo.json | 2 +- 7 files changed, 151 insertions(+), 7 deletions(-) create mode 100644 packages/database/scripts/migrate.ts diff --git a/.github/workflows/database-migrate.yml b/.github/workflows/database-migrate.yml index b83545561..4e8c13598 100644 --- a/.github/workflows/database-migrate.yml +++ b/.github/workflows/database-migrate.yml @@ -16,7 +16,7 @@ jobs: with: node-version: "18" - run: npm ci - - run: npm run db:push + - run: npm run db:migrate - name: Add comment uses: mshick/add-pr-comment@v2 with: diff --git a/package-lock.json b/package-lock.json index 526e4dc89..248ecd41f 100644 --- a/package-lock.json +++ b/package-lock.json @@ -3229,6 +3229,28 @@ "sparqlalgebrajs": "^4.2.0" } }, + "node_modules/@cspotcode/source-map-support": { + "version": "0.8.1", + "resolved": "https://registry.npmjs.org/@cspotcode/source-map-support/-/source-map-support-0.8.1.tgz", + "integrity": "sha512-IchNf6dN4tHoMFIn/7OE8LWZ19Y6q/67Bmf6vnGREv8RSbBVb9LPJxEcnwrcwX6ixSvaiGoomAUvu4YSxXrVgw==", + "devOptional": true, + "dependencies": { + "@jridgewell/trace-mapping": "0.3.9" + }, + "engines": { + "node": ">=12" + } + }, + "node_modules/@cspotcode/source-map-support/node_modules/@jridgewell/trace-mapping": { + "version": "0.3.9", + "resolved": "https://registry.npmjs.org/@jridgewell/trace-mapping/-/trace-mapping-0.3.9.tgz", + "integrity": "sha512-3Belt6tdc8bPgAtbcmdtNJlirVoTmEb5e2gC94PnkwEW9jI6CAHUeoG85tjWP5WquqfavoMtMwiG4P926ZKKuQ==", + "devOptional": true, + "dependencies": { + "@jridgewell/resolve-uri": "^3.0.3", + "@jridgewell/sourcemap-codec": "^1.4.10" + } + }, "node_modules/@cypress/request": { "version": "2.88.11", "dev": true, @@ -4265,6 +4287,30 @@ "node": ">= 10" } }, + "node_modules/@tsconfig/node10": { + "version": "1.0.9", + "resolved": "https://registry.npmjs.org/@tsconfig/node10/-/node10-1.0.9.tgz", + "integrity": "sha512-jNsYVVxU8v5g43Erja32laIDHXeoNvFEpX33OK4d6hljo3jDhCBDhx5dhCCTMWUojscpAagGiRkBKxpdl9fxqA==", + "devOptional": true + }, + "node_modules/@tsconfig/node12": { + "version": "1.0.11", + "resolved": "https://registry.npmjs.org/@tsconfig/node12/-/node12-1.0.11.tgz", + "integrity": "sha512-cqefuRsh12pWyGsIoBKJA9luFu3mRxCA+ORZvA4ktLSzIuCUtWVxGIuXigEwO5/ywWFMZ2QEGKWvkZG1zDMTag==", + "devOptional": true + }, + "node_modules/@tsconfig/node14": { + "version": "1.0.3", + "resolved": "https://registry.npmjs.org/@tsconfig/node14/-/node14-1.0.3.tgz", + "integrity": "sha512-ysT8mhdixWK6Hw3i1V2AeRqZ5WfXg1G43mqoYlM2nc6388Fq5jcXyr5mRsqViLx/GJYdoL0bfXD8nmF+Zn/Iow==", + "devOptional": true + }, + "node_modules/@tsconfig/node16": { + "version": "1.0.4", + "resolved": "https://registry.npmjs.org/@tsconfig/node16/-/node16-1.0.4.tgz", + "integrity": "sha512-vxhUy4J8lyeyinH7Azl1pdd43GJhZH/tP2weN8TntQblOY+A0XbT8DJk1/oCPuOOyg/Ja757rG0CgHcWC8OfMA==", + "devOptional": true + }, "node_modules/@types/aria-query": { "version": "5.0.1", "license": "MIT" @@ -5999,6 +6045,12 @@ "dev": true, "license": "MIT" }, + "node_modules/create-require": { + "version": "1.1.1", + "resolved": "https://registry.npmjs.org/create-require/-/create-require-1.1.1.tgz", + "integrity": "sha512-dcKFX3jn0MpIaXjisoRvexIJVEKzaq7z2rZKxf+MSr9TkdmHmsU4m2lcLojrj/FHl8mk5VxMmYA+ftRkP/3oKQ==", + "devOptional": true + }, "node_modules/cross-fetch": { "version": "3.1.5", "license": "MIT", @@ -6505,6 +6557,15 @@ "version": "1.2.2", "license": "Apache-2.0" }, + "node_modules/diff": { + "version": "4.0.2", + "resolved": "https://registry.npmjs.org/diff/-/diff-4.0.2.tgz", + "integrity": "sha512-58lmxKSA4BNyLz+HHMUzlOEpg09FV+ev6ZMe3vJihgdxzgcwZ8VoEEPmALCZG9LmqfVoNMMKpttIYTVG6uDY7A==", + "devOptional": true, + "engines": { + "node": ">=0.3.1" + } + }, "node_modules/diff-sequences": { "version": "29.6.3", "dev": true, @@ -11212,7 +11273,7 @@ }, "node_modules/make-error": { "version": "1.3.6", - "dev": true, + "devOptional": true, "license": "ISC" }, "node_modules/makeerror": { @@ -14135,6 +14196,55 @@ "node": ">=12" } }, + "node_modules/ts-node": { + "version": "10.9.1", + "resolved": "https://registry.npmjs.org/ts-node/-/ts-node-10.9.1.tgz", + "integrity": "sha512-NtVysVPkxxrwFGUUxGYhfux8k78pQB3JqYBXlLRZgdGUqTO5wU/UyHop5p70iEbGhB7q5KmiZiU0Y3KlJrScEw==", + "devOptional": true, + "dependencies": { + "@cspotcode/source-map-support": "^0.8.0", + "@tsconfig/node10": "^1.0.7", + "@tsconfig/node12": "^1.0.7", + "@tsconfig/node14": "^1.0.0", + "@tsconfig/node16": "^1.0.2", + "acorn": "^8.4.1", + "acorn-walk": "^8.1.1", + "arg": "^4.1.0", + "create-require": "^1.1.0", + "diff": "^4.0.1", + "make-error": "^1.1.1", + "v8-compile-cache-lib": "^3.0.1", + "yn": "3.1.1" + }, + "bin": { + "ts-node": "dist/bin.js", + "ts-node-cwd": "dist/bin-cwd.js", + "ts-node-esm": "dist/bin-esm.js", + "ts-node-script": "dist/bin-script.js", + "ts-node-transpile-only": "dist/bin-transpile.js", + "ts-script": "dist/bin-script-deprecated.js" + }, + "peerDependencies": { + "@swc/core": ">=1.2.50", + "@swc/wasm": ">=1.2.50", + "@types/node": "*", + "typescript": ">=2.7" + }, + "peerDependenciesMeta": { + "@swc/core": { + "optional": true + }, + "@swc/wasm": { + "optional": true + } + } + }, + "node_modules/ts-node/node_modules/arg": { + "version": "4.1.3", + "resolved": "https://registry.npmjs.org/arg/-/arg-4.1.3.tgz", + "integrity": "sha512-58S9QDqG0Xx27YwPSt9fJxivjYl432YCwfDMfZ+71RAqUrZef7LrKQZ3LHLOwCS4FLNBplP533Zx895SeOCHvA==", + "devOptional": true + }, "node_modules/tsconfig": { "resolved": "packages/tsconfig", "link": true @@ -14328,7 +14438,7 @@ }, "node_modules/typescript": { "version": "5.1.6", - "dev": true, + "devOptional": true, "license": "Apache-2.0", "bin": { "tsc": "bin/tsc", @@ -14454,6 +14564,12 @@ "uuid": "dist/bin/uuid" } }, + "node_modules/v8-compile-cache-lib": { + "version": "3.0.1", + "resolved": "https://registry.npmjs.org/v8-compile-cache-lib/-/v8-compile-cache-lib-3.0.1.tgz", + "integrity": "sha512-wa7YjyUGfNZngI/vtK0UHAN+lgDCxBPCylVXGp0zu59Fz5aiGtNXaq3DhIov063MorB+VfufLh3JlF2KdTK3xg==", + "devOptional": true + }, "node_modules/v8-to-istanbul": { "version": "9.1.0", "dev": true, @@ -14870,6 +14986,15 @@ "fd-slicer": "~1.1.0" } }, + "node_modules/yn": { + "version": "3.1.1", + "resolved": "https://registry.npmjs.org/yn/-/yn-3.1.1.tgz", + "integrity": "sha512-Ux4ygGWsu2c7isFWe8Yu1YluJmqVhxqK2cLXNQA5AcC3QfbGNpM7fu0Y8b/z16pXLnFxZYvWhd3fhBY9DLmC6Q==", + "devOptional": true, + "engines": { + "node": ">=6" + } + }, "node_modules/yocto-queue": { "version": "0.1.0", "dev": true, @@ -14930,6 +15055,7 @@ "devDependencies": { "dotenv-cli": "7.3.0", "eslint-config-custom": "*", + "ts-node": "10.9.1", "tsconfig": "*" } }, diff --git a/package.json b/package.json index b06af6c37..51219d7f0 100644 --- a/package.json +++ b/package.json @@ -20,7 +20,7 @@ "test:integration:watch": "turbo run test:integration:watch", "test:e2e": "turbo run test:e2e", "db:generate": "turbo run db:generate", - "db:push": "turbo run db:push" + "db:migrate": "turbo run db:migrate" }, "devDependencies": { "eslint-config-custom": "*", diff --git a/packages/database/README.md b/packages/database/README.md index 61a967ddd..a4d052acb 100644 --- a/packages/database/README.md +++ b/packages/database/README.md @@ -26,7 +26,7 @@ Set the DATABASE_URL to: Whenever you make changes to the database schema in `src/db/schema`, you need to run `npm run db:generate`, which will generate a SQL migration file for you. -To push the changes to your local database, run `npm run db:push`. +To push the changes to your local database, run `npm run db:migrate`. # Drizzle Studio diff --git a/packages/database/package.json b/packages/database/package.json index 405fde731..5b55d5258 100644 --- a/packages/database/package.json +++ b/packages/database/package.json @@ -6,7 +6,7 @@ "types": "./src/index.ts", "scripts": { "db:generate": "dotenv -c -- drizzle-kit generate:mysql", - "db:push": "dotenv -c -- drizzle-kit push:mysql", + "db:migrate": "dotenv -c -- ts-node ./scripts/migrate.ts", "db:drop": "dotenv -c -- drizzle-kit drop", "db:studio": "dotenv -c -- drizzle-kit studio", "db:create": "bash ./scripts/create-database.sh" @@ -14,6 +14,7 @@ "devDependencies": { "dotenv-cli": "7.3.0", "eslint-config-custom": "*", + "ts-node": "10.9.1", "tsconfig": "*" }, "dependencies": { diff --git a/packages/database/scripts/migrate.ts b/packages/database/scripts/migrate.ts new file mode 100644 index 000000000..aefffbecc --- /dev/null +++ b/packages/database/scripts/migrate.ts @@ -0,0 +1,17 @@ +import {migrate} from 'drizzle-orm/mysql2/migrator'; +import db from '../src/db/connection'; +import {exit} from 'node:process'; + +async function runMigrations() { + try { + await migrate(db, { + migrationsFolder: './../database/migrations', + }); + exit(); + } catch (e) { + console.error(e); + exit(1); + } +} + +runMigrations(); diff --git a/turbo.json b/turbo.json index d234beba5..5b9781405 100644 --- a/turbo.json +++ b/turbo.json @@ -23,7 +23,7 @@ "db:generate": { "cache": false }, - "db:push": { + "db:migrate": { "cache": false } } From adc0058a696d4768e5c6267703c1210f2d3b869d Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Thu, 21 Sep 2023 11:05:08 +0200 Subject: [PATCH 21/26] Add object hash (md5) to schema --- .../migrations/0001_create_object_item.sql | 8 ++--- .../migrations/meta/0000_snapshot.json | 2 +- .../migrations/meta/0001_snapshot.json | 30 +++++++++---------- .../database/migrations/meta/_journal.json | 4 +-- packages/database/package.json | 12 +++++++- packages/database/src/db/schema.ts | 7 ++--- packages/database/src/iriToHash.test.ts | 15 ++++++++++ packages/database/src/iriToHash.ts | 7 +++++ packages/database/src/object-list.ts | 2 ++ 9 files changed, 60 insertions(+), 27 deletions(-) create mode 100644 packages/database/src/iriToHash.test.ts create mode 100644 packages/database/src/iriToHash.ts diff --git a/packages/database/migrations/0001_create_object_item.sql b/packages/database/migrations/0001_create_object_item.sql index 2b2f7d9dc..00ab653f2 100644 --- a/packages/database/migrations/0001_create_object_item.sql +++ b/packages/database/migrations/0001_create_object_item.sql @@ -1,12 +1,12 @@ CREATE TABLE `object_item` ( - `id` serial AUTO_INCREMENT NOT NULL, + `object_hash` varchar(32) NOT NULL, `object_id` text NOT NULL, `object_list_id` int, `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, `created_by` varchar(50) NOT NULL, - CONSTRAINT `object_item_id` PRIMARY KEY(`id`), - CONSTRAINT `object_item_object_id_object_list_id_unique` UNIQUE(`object_id`,`object_list_id`) + CONSTRAINT `object_item_object_hash` PRIMARY KEY(`object_hash`), + CONSTRAINT `object_item_object_hash_object_list_id_unique` UNIQUE(`object_hash`,`object_list_id`) ); --> statement-breakpoint -CREATE INDEX `object_id` ON `object_item` (`object_id`);--> statement-breakpoint +CREATE INDEX `object_hash` ON `object_item` (`object_hash`);--> statement-breakpoint CREATE INDEX `object_list_id` ON `object_item` (`object_list_id`); \ No newline at end of file diff --git a/packages/database/migrations/meta/0000_snapshot.json b/packages/database/migrations/meta/0000_snapshot.json index a8d7351b1..96fe4ca91 100644 --- a/packages/database/migrations/meta/0000_snapshot.json +++ b/packages/database/migrations/meta/0000_snapshot.json @@ -1,7 +1,7 @@ { "version": "5", "dialect": "mysql", - "id": "4ce42ab4-fdff-449e-9757-1afe2d24c8ff", + "id": "fa9b049d-c092-42f8-a57e-8cae800db6dd", "prevId": "00000000-0000-0000-0000-000000000000", "tables": { "object_list": { diff --git a/packages/database/migrations/meta/0001_snapshot.json b/packages/database/migrations/meta/0001_snapshot.json index 0e4c42da9..5b360c1ba 100644 --- a/packages/database/migrations/meta/0001_snapshot.json +++ b/packages/database/migrations/meta/0001_snapshot.json @@ -1,18 +1,18 @@ { "version": "5", "dialect": "mysql", - "id": "bb5484fc-0270-4cab-be00-c4879c8e2539", - "prevId": "4ce42ab4-fdff-449e-9757-1afe2d24c8ff", + "id": "cf9627d1-a3e1-4768-8539-90a87f3e0a97", + "prevId": "fa9b049d-c092-42f8-a57e-8cae800db6dd", "tables": { "object_item": { "name": "object_item", "columns": { - "id": { - "name": "id", - "type": "serial", + "object_hash": { + "name": "object_hash", + "type": "varchar(32)", "primaryKey": false, "notNull": true, - "autoincrement": true + "autoincrement": false }, "object_id": { "name": "object_id", @@ -45,10 +45,10 @@ } }, "indexes": { - "object_id": { - "name": "object_id", + "object_hash": { + "name": "object_hash", "columns": [ - "object_id" + "object_hash" ], "isUnique": false }, @@ -62,18 +62,18 @@ }, "foreignKeys": {}, "compositePrimaryKeys": { - "object_item_id": { - "name": "object_item_id", + "object_item_object_hash": { + "name": "object_item_object_hash", "columns": [ - "id" + "object_hash" ] } }, "uniqueConstraints": { - "object_item_object_id_object_list_id_unique": { - "name": "object_item_object_id_object_list_id_unique", + "object_item_object_hash_object_list_id_unique": { + "name": "object_item_object_hash_object_list_id_unique", "columns": [ - "object_id", + "object_hash", "object_list_id" ] } diff --git a/packages/database/migrations/meta/_journal.json b/packages/database/migrations/meta/_journal.json index bca389800..f983b0fa7 100644 --- a/packages/database/migrations/meta/_journal.json +++ b/packages/database/migrations/meta/_journal.json @@ -5,14 +5,14 @@ { "idx": 0, "version": "5", - "when": 1695113713084, + "when": 1695286867071, "tag": "0000_create_object_list", "breakpoints": true }, { "idx": 1, "version": "5", - "when": 1695113728187, + "when": 1695286872562, "tag": "0001_create_object_item", "breakpoints": true } diff --git a/packages/database/package.json b/packages/database/package.json index 5b55d5258..6a0c018be 100644 --- a/packages/database/package.json +++ b/packages/database/package.json @@ -9,7 +9,10 @@ "db:migrate": "dotenv -c -- ts-node ./scripts/migrate.ts", "db:drop": "dotenv -c -- drizzle-kit drop", "db:studio": "dotenv -c -- drizzle-kit studio", - "db:create": "bash ./scripts/create-database.sh" + "db:create": "bash ./scripts/create-database.sh", + "test": "jest", + "test:ci": "npm test -- --ci", + "test:watch": "npm test -- --watchAll" }, "devDependencies": { "dotenv-cli": "7.3.0", @@ -22,5 +25,12 @@ "drizzle-orm": "0.28.5", "drizzle-zod": "0.5.1", "mysql2": "3.6.0" + }, + "jest": { + "preset": "ts-jest", + "testTimeout": 60000, + "testMatch": ["/src/**/*.test.ts"], + "collectCoverage": true, + "collectCoverageFrom": ["/src/**/*.ts"] } } diff --git a/packages/database/src/db/schema.ts b/packages/database/src/db/schema.ts index 2e8d2643b..3ce37e7ff 100644 --- a/packages/database/src/db/schema.ts +++ b/packages/database/src/db/schema.ts @@ -39,8 +39,7 @@ export const objectListsRelations = relations(objectLists, ({many}) => ({ export const objectItems = mysqlTable( 'object_item', { - id: serial('id').primaryKey(), - // The objectId is a uri, so it can be long. + objectHash: varchar('object_hash', {length: 32}).primaryKey(), objectId: text('object_id').notNull(), objectListId: int('object_list_id'), createdAt: timestamp('created_at') @@ -52,9 +51,9 @@ export const objectItems = mysqlTable( createdBy: varchar('created_by', {length: 50}).notNull(), }, item => ({ - objectId: index('object_id').on(item.objectId), + objectHash: index('object_hash').on(item.objectHash), objectListId: index('object_list_id').on(item.objectListId), - unique: unique().on(item.objectId, item.objectListId), + unique: unique().on(item.objectHash, item.objectListId), }) ); diff --git a/packages/database/src/iriToHash.test.ts b/packages/database/src/iriToHash.test.ts new file mode 100644 index 000000000..189eb01a6 --- /dev/null +++ b/packages/database/src/iriToHash.test.ts @@ -0,0 +1,15 @@ +import {iriToHash} from './iriToHash'; + +describe('iriToHash', () => { + it('returns a hash', () => { + const hash = iriToHash('https://example.com'); + expect(hash).toBe('c984d06aafbecf6bc55569f964148ea3'); + }); + + it('returns a hash of the same length', () => { + const hash = iriToHash( + 'https://example.com/1234567890123456789012345678901234567890' + ); + expect(hash.length).toBe(32); + }); +}); diff --git a/packages/database/src/iriToHash.ts b/packages/database/src/iriToHash.ts new file mode 100644 index 000000000..ad33f228a --- /dev/null +++ b/packages/database/src/iriToHash.ts @@ -0,0 +1,7 @@ +import crypto from 'crypto'; + +export function iriToHash(iri: string) { + const hash = crypto.createHash('md5'); + hash.update(iri); + return hash.digest('hex'); +} diff --git a/packages/database/src/object-list.ts b/packages/database/src/object-list.ts index a76c6dc42..7d995b438 100644 --- a/packages/database/src/object-list.ts +++ b/packages/database/src/object-list.ts @@ -2,6 +2,7 @@ import {objectLists, insertObjectItemSchema, objectItems} from './db/schema'; import db from './db/connection'; +import {iriToHash} from './iriToHash'; async function getListsByCommunityId(communityId: string) { return db.query.objectLists.findMany({ @@ -54,6 +55,7 @@ async function addObjectToList({ listId, objectId, createdBy: userId, + objectHash: iriToHash(objectId), }); return db.insert(objectItems).values(objectItem); From 0d659cf590dcae53c30d565f719adb2dc46a60a7 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Thu, 21 Sep 2023 12:39:42 +0200 Subject: [PATCH 22/26] Chaged `objectHash` to `id` --- .../migrations/0001_create_object_item.sql | 8 +++---- .../migrations/meta/0001_snapshot.json | 22 +++++++++---------- packages/database/src/db/schema.ts | 6 ++--- packages/database/src/object-list.ts | 2 +- 4 files changed, 19 insertions(+), 19 deletions(-) diff --git a/packages/database/migrations/0001_create_object_item.sql b/packages/database/migrations/0001_create_object_item.sql index 00ab653f2..4df28d199 100644 --- a/packages/database/migrations/0001_create_object_item.sql +++ b/packages/database/migrations/0001_create_object_item.sql @@ -1,12 +1,12 @@ CREATE TABLE `object_item` ( - `object_hash` varchar(32) NOT NULL, + `id` varchar(32) NOT NULL, `object_id` text NOT NULL, `object_list_id` int, `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, `created_by` varchar(50) NOT NULL, - CONSTRAINT `object_item_object_hash` PRIMARY KEY(`object_hash`), - CONSTRAINT `object_item_object_hash_object_list_id_unique` UNIQUE(`object_hash`,`object_list_id`) + CONSTRAINT `object_item_id` PRIMARY KEY(`id`), + CONSTRAINT `object_item_id_object_list_id_unique` UNIQUE(`id`,`object_list_id`) ); --> statement-breakpoint -CREATE INDEX `object_hash` ON `object_item` (`object_hash`);--> statement-breakpoint +CREATE INDEX `id` ON `object_item` (`id`);--> statement-breakpoint CREATE INDEX `object_list_id` ON `object_item` (`object_list_id`); \ No newline at end of file diff --git a/packages/database/migrations/meta/0001_snapshot.json b/packages/database/migrations/meta/0001_snapshot.json index 5b360c1ba..435797a71 100644 --- a/packages/database/migrations/meta/0001_snapshot.json +++ b/packages/database/migrations/meta/0001_snapshot.json @@ -7,8 +7,8 @@ "object_item": { "name": "object_item", "columns": { - "object_hash": { - "name": "object_hash", + "id": { + "name": "id", "type": "varchar(32)", "primaryKey": false, "notNull": true, @@ -45,10 +45,10 @@ } }, "indexes": { - "object_hash": { - "name": "object_hash", + "id": { + "name": "id", "columns": [ - "object_hash" + "id" ], "isUnique": false }, @@ -62,18 +62,18 @@ }, "foreignKeys": {}, "compositePrimaryKeys": { - "object_item_object_hash": { - "name": "object_item_object_hash", + "object_item_id": { + "name": "object_item_id", "columns": [ - "object_hash" + "id" ] } }, "uniqueConstraints": { - "object_item_object_hash_object_list_id_unique": { - "name": "object_item_object_hash_object_list_id_unique", + "object_item_id_object_list_id_unique": { + "name": "object_item_id_object_list_id_unique", "columns": [ - "object_hash", + "id", "object_list_id" ] } diff --git a/packages/database/src/db/schema.ts b/packages/database/src/db/schema.ts index 3ce37e7ff..3bad8c1ea 100644 --- a/packages/database/src/db/schema.ts +++ b/packages/database/src/db/schema.ts @@ -39,7 +39,7 @@ export const objectListsRelations = relations(objectLists, ({many}) => ({ export const objectItems = mysqlTable( 'object_item', { - objectHash: varchar('object_hash', {length: 32}).primaryKey(), + id: varchar('id', {length: 32}).primaryKey(), objectId: text('object_id').notNull(), objectListId: int('object_list_id'), createdAt: timestamp('created_at') @@ -51,9 +51,9 @@ export const objectItems = mysqlTable( createdBy: varchar('created_by', {length: 50}).notNull(), }, item => ({ - objectHash: index('object_hash').on(item.objectHash), + id: index('id').on(item.id), objectListId: index('object_list_id').on(item.objectListId), - unique: unique().on(item.objectHash, item.objectListId), + unique: unique().on(item.id, item.objectListId), }) ); diff --git a/packages/database/src/object-list.ts b/packages/database/src/object-list.ts index 7d995b438..f2a20c880 100644 --- a/packages/database/src/object-list.ts +++ b/packages/database/src/object-list.ts @@ -55,7 +55,7 @@ async function addObjectToList({ listId, objectId, createdBy: userId, - objectHash: iriToHash(objectId), + id: iriToHash(objectId), }); return db.insert(objectItems).values(objectItem); From 862102f646ce1bc9ddad91ba0a3b48b31a4df91d Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Thu, 21 Sep 2023 12:46:25 +0200 Subject: [PATCH 23/26] Minor code review remarks --- packages/database/README.md | 10 +++++----- packages/database/drizzle.config.ts | 4 ++++ packages/database/package.json | 2 +- packages/database/scripts/create-database.sh | 10 +++++++--- packages/database/scripts/migrate.ts | 6 +++--- packages/database/src/db/connection.ts | 2 +- packages/database/src/index.ts | 2 +- .../src/{iriToHash.test.ts => iri-to-hash.test.ts} | 8 +------- packages/database/src/{iriToHash.ts => iri-to-hash.ts} | 2 +- packages/database/src/object-list.ts | 4 ++-- 10 files changed, 26 insertions(+), 24 deletions(-) mode change 100644 => 100755 packages/database/scripts/create-database.sh rename packages/database/src/{iriToHash.test.ts => iri-to-hash.test.ts} (51%) rename packages/database/src/{iriToHash.ts => iri-to-hash.ts} (79%) diff --git a/packages/database/README.md b/packages/database/README.md index a4d052acb..3b94dac57 100644 --- a/packages/database/README.md +++ b/packages/database/README.md @@ -1,10 +1,10 @@ # Datahub database -This package is the database connector needed to read and write Datahub data. To connect to the database via the researcher app, ensure the environment variable DATABASE_URL is set in `apps/researcher/.env.local`. If you want to connect to the database outside the app to run scripts, add the DATABASE_URL to `packages/database/.env.local`. +This package is the database connector needed to read and write Datahub data. To connect to the database via the Research App, ensure the environment variable `DATABASE_URL` is set in `apps/researcher/.env.local`. If you want to connect to the database outside the app to run scripts, add the `DATABASE_URL` to `packages/database/.env.local`. -# Connecting to the local MySQL database with docker. +# Connecting to the local MySQL database with Docker. -You can create a MySQL database with docker. Use the following command to start your MySQL container. It will create a new Docker volume called MySQL. +You can create a MySQL database with docker. Use the following command to start your MySQL container. It will create a new Docker volume called 'mysql'. docker run --name mysql -d \ -p 3306:3306 \ @@ -18,13 +18,13 @@ Create a new database with: npm run db:create -w @colonial-collections/database -Set the DATABASE_URL to: +Set the `DATABASE_URL` to: DATABASE_URL='mysql://root:{password}@localhost:3306/{database_name}' # Schema migrations -Whenever you make changes to the database schema in `src/db/schema`, you need to run `npm run db:generate`, which will generate a SQL migration file for you. +Whenever you make changes to the database schema in `src/db/schema.ts`, you need to run `npm run db:generate`, which will generate a SQL migration file for you. To push the changes to your local database, run `npm run db:migrate`. diff --git a/packages/database/drizzle.config.ts b/packages/database/drizzle.config.ts index cabbde392..0178f1ece 100644 --- a/packages/database/drizzle.config.ts +++ b/packages/database/drizzle.config.ts @@ -1,6 +1,10 @@ import type {Config} from 'drizzle-kit'; import {env} from 'node:process'; +if (!env.DATABASE_URL) { + throw new Error('`DATABASE_URL` environment variable is not set'); +} + export default { schema: './src/db/schema.ts', out: './migrations', diff --git a/packages/database/package.json b/packages/database/package.json index 6a0c018be..d9314f434 100644 --- a/packages/database/package.json +++ b/packages/database/package.json @@ -9,7 +9,7 @@ "db:migrate": "dotenv -c -- ts-node ./scripts/migrate.ts", "db:drop": "dotenv -c -- drizzle-kit drop", "db:studio": "dotenv -c -- drizzle-kit studio", - "db:create": "bash ./scripts/create-database.sh", + "db:create": "./scripts/create-database.sh", "test": "jest", "test:ci": "npm test -- --ci", "test:watch": "npm test -- --watchAll" diff --git a/packages/database/scripts/create-database.sh b/packages/database/scripts/create-database.sh old mode 100644 new mode 100755 index 3f9822451..ab9768043 --- a/packages/database/scripts/create-database.sh +++ b/packages/database/scripts/create-database.sh @@ -1,6 +1,9 @@ #!/bin/bash -read -p "What is the mysql docker container name? [mysql]: " container_name +# This script creates a new database in the mysql container. +# This is only needed for local development. + +read -p "What is the MySQL Docker container name? [mysql]: " container_name container_name=${container_name:-mysql} read -p "What is the new database name? [datahub_development]: " database_name @@ -11,6 +14,7 @@ user_name=${user_name:-root} read -p "What is the mysql password?: " password -docker exec ${container_name} mysql -u ${user_name} -p${password} -e "CREATE DATABASE ${database_name};" && +docker exec ${container_name} mysql --user=${user_name} --password=${password} -e "CREATE DATABASE ${database_name};" && echo "Database created successfully" && -echo "DATABASE_URL='mysql://${user_name}:${password}@localhost:3306/${database_name}'" \ No newline at end of file +echo "Add the credentials to the DATABASE_URL in the env file using the following format:" && +echo "mysql://{user_name}:{password}@localhost:3306/{database_name}" \ No newline at end of file diff --git a/packages/database/scripts/migrate.ts b/packages/database/scripts/migrate.ts index aefffbecc..a2267fc09 100644 --- a/packages/database/scripts/migrate.ts +++ b/packages/database/scripts/migrate.ts @@ -1,5 +1,5 @@ import {migrate} from 'drizzle-orm/mysql2/migrator'; -import db from '../src/db/connection'; +import {db} from '../src/db/connection'; import {exit} from 'node:process'; async function runMigrations() { @@ -8,8 +8,8 @@ async function runMigrations() { migrationsFolder: './../database/migrations', }); exit(); - } catch (e) { - console.error(e); + } catch (err) { + console.error(err); exit(1); } } diff --git a/packages/database/src/db/connection.ts b/packages/database/src/db/connection.ts index 14d7ea986..9c7f78aa3 100644 --- a/packages/database/src/db/connection.ts +++ b/packages/database/src/db/connection.ts @@ -8,7 +8,7 @@ const poolConnection = mysql.createPool({ uri: env['DATABASE_URL'], }); -export default drizzle(poolConnection, { +export const db = drizzle(poolConnection, { schema, mode: (env['DATABASE_MODE'] || 'default') as Mode, }); diff --git a/packages/database/src/index.ts b/packages/database/src/index.ts index f070de769..beec8dd62 100644 --- a/packages/database/src/index.ts +++ b/packages/database/src/index.ts @@ -1 +1 @@ -export {objectList} from './object-list'; +export * from './object-list'; diff --git a/packages/database/src/iriToHash.test.ts b/packages/database/src/iri-to-hash.test.ts similarity index 51% rename from packages/database/src/iriToHash.test.ts rename to packages/database/src/iri-to-hash.test.ts index 189eb01a6..17a8ac5e8 100644 --- a/packages/database/src/iriToHash.test.ts +++ b/packages/database/src/iri-to-hash.test.ts @@ -1,15 +1,9 @@ -import {iriToHash} from './iriToHash'; +import {iriToHash} from './iri-to-hash'; describe('iriToHash', () => { it('returns a hash', () => { const hash = iriToHash('https://example.com'); expect(hash).toBe('c984d06aafbecf6bc55569f964148ea3'); - }); - - it('returns a hash of the same length', () => { - const hash = iriToHash( - 'https://example.com/1234567890123456789012345678901234567890' - ); expect(hash.length).toBe(32); }); }); diff --git a/packages/database/src/iriToHash.ts b/packages/database/src/iri-to-hash.ts similarity index 79% rename from packages/database/src/iriToHash.ts rename to packages/database/src/iri-to-hash.ts index ad33f228a..7484cda25 100644 --- a/packages/database/src/iriToHash.ts +++ b/packages/database/src/iri-to-hash.ts @@ -1,4 +1,4 @@ -import crypto from 'crypto'; +import crypto from 'node:crypto'; export function iriToHash(iri: string) { const hash = crypto.createHash('md5'); diff --git a/packages/database/src/object-list.ts b/packages/database/src/object-list.ts index f2a20c880..9a647313b 100644 --- a/packages/database/src/object-list.ts +++ b/packages/database/src/object-list.ts @@ -1,8 +1,8 @@ 'use server'; import {objectLists, insertObjectItemSchema, objectItems} from './db/schema'; -import db from './db/connection'; -import {iriToHash} from './iriToHash'; +import {db} from './db/connection'; +import {iriToHash} from './iri-to-hash'; async function getListsByCommunityId(communityId: string) { return db.query.objectLists.findMany({ From b999ada68d47782f7d3979baef23f1a4b2b2aa26 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Thu, 21 Sep 2023 14:13:57 +0200 Subject: [PATCH 24/26] minor code review changes --- packages/database/README.md | 2 +- packages/database/drizzle.config.ts | 2 +- packages/database/scripts/create-database.sh | 14 +++++++------- 3 files changed, 9 insertions(+), 9 deletions(-) diff --git a/packages/database/README.md b/packages/database/README.md index 3b94dac57..93b7d40d7 100644 --- a/packages/database/README.md +++ b/packages/database/README.md @@ -4,7 +4,7 @@ This package is the database connector needed to read and write Datahub data. To # Connecting to the local MySQL database with Docker. -You can create a MySQL database with docker. Use the following command to start your MySQL container. It will create a new Docker volume called 'mysql'. +You can create a MySQL database with Docker. Use the following command to start your MySQL container. It will create a new Docker volume called 'mysql'. docker run --name mysql -d \ -p 3306:3306 \ diff --git a/packages/database/drizzle.config.ts b/packages/database/drizzle.config.ts index 0178f1ece..6fb4bc44d 100644 --- a/packages/database/drizzle.config.ts +++ b/packages/database/drizzle.config.ts @@ -10,6 +10,6 @@ export default { out: './migrations', driver: 'mysql2', dbCredentials: { - connectionString: env.DATABASE_URL || '', + connectionString: env.DATABASE_URL, }, } satisfies Config; diff --git a/packages/database/scripts/create-database.sh b/packages/database/scripts/create-database.sh index ab9768043..cfd3bb0da 100755 --- a/packages/database/scripts/create-database.sh +++ b/packages/database/scripts/create-database.sh @@ -1,6 +1,6 @@ #!/bin/bash -# This script creates a new database in the mysql container. +# This script creates a new database in the MySQL container. # This is only needed for local development. read -p "What is the MySQL Docker container name? [mysql]: " container_name @@ -9,12 +9,12 @@ container_name=${container_name:-mysql} read -p "What is the new database name? [datahub_development]: " database_name database_name=${database_name:-datahub_development} -read -p "What is the mysql username? [root]: " user_name +read -p "What is the MySQL username? [root]: " user_name user_name=${user_name:-root} -read -p "What is the mysql password?: " password +read -p "What is the MySQL password?: " password -docker exec ${container_name} mysql --user=${user_name} --password=${password} -e "CREATE DATABASE ${database_name};" && -echo "Database created successfully" && -echo "Add the credentials to the DATABASE_URL in the env file using the following format:" && -echo "mysql://{user_name}:{password}@localhost:3306/{database_name}" \ No newline at end of file +docker exec ${container_name} mysql --user="${user_name}" --password="${password}" -e "CREATE DATABASE ${database_name};" && + echo "Database created successfully" && + echo "Add the credentials to the DATABASE_URL in the env file using the following format:" && + echo "mysql://{user_name}:{password}@localhost:3306/{database_name}" \ No newline at end of file From 017d6821b163c9e051ca1106ec88b7255e42cf88 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Thu, 21 Sep 2023 14:29:07 +0200 Subject: [PATCH 25/26] Update database schema --- packages/database/drizzle.config.ts | 2 +- .../migrations/0001_create_object_item.sql | 10 ++++----- .../migrations/meta/0001_snapshot.json | 22 +++++++++---------- packages/database/src/db/schema.ts | 8 +++---- packages/database/src/object-list.ts | 8 +++---- 5 files changed, 25 insertions(+), 25 deletions(-) diff --git a/packages/database/drizzle.config.ts b/packages/database/drizzle.config.ts index 6fb4bc44d..9e5c2d6fc 100644 --- a/packages/database/drizzle.config.ts +++ b/packages/database/drizzle.config.ts @@ -10,6 +10,6 @@ export default { out: './migrations', driver: 'mysql2', dbCredentials: { - connectionString: env.DATABASE_URL, + connectionString: env.DATABASE_URL as string, }, } satisfies Config; diff --git a/packages/database/migrations/0001_create_object_item.sql b/packages/database/migrations/0001_create_object_item.sql index 4df28d199..ad4b68359 100644 --- a/packages/database/migrations/0001_create_object_item.sql +++ b/packages/database/migrations/0001_create_object_item.sql @@ -1,12 +1,12 @@ CREATE TABLE `object_item` ( - `id` varchar(32) NOT NULL, - `object_id` text NOT NULL, + `object_id` varchar(32) NOT NULL, + `object_iri` text NOT NULL, `object_list_id` int, `created_at` timestamp NOT NULL DEFAULT CURRENT_TIMESTAMP, `created_by` varchar(50) NOT NULL, - CONSTRAINT `object_item_id` PRIMARY KEY(`id`), - CONSTRAINT `object_item_id_object_list_id_unique` UNIQUE(`id`,`object_list_id`) + CONSTRAINT `object_item_object_id` PRIMARY KEY(`object_id`), + CONSTRAINT `object_item_object_id_object_list_id_unique` UNIQUE(`object_id`,`object_list_id`) ); --> statement-breakpoint -CREATE INDEX `id` ON `object_item` (`id`);--> statement-breakpoint +CREATE INDEX `id` ON `object_item` (`object_id`);--> statement-breakpoint CREATE INDEX `object_list_id` ON `object_item` (`object_list_id`); \ No newline at end of file diff --git a/packages/database/migrations/meta/0001_snapshot.json b/packages/database/migrations/meta/0001_snapshot.json index 435797a71..910aa4538 100644 --- a/packages/database/migrations/meta/0001_snapshot.json +++ b/packages/database/migrations/meta/0001_snapshot.json @@ -7,15 +7,15 @@ "object_item": { "name": "object_item", "columns": { - "id": { - "name": "id", + "object_id": { + "name": "object_id", "type": "varchar(32)", "primaryKey": false, "notNull": true, "autoincrement": false }, - "object_id": { - "name": "object_id", + "object_iri": { + "name": "object_iri", "type": "text", "primaryKey": false, "notNull": true, @@ -48,7 +48,7 @@ "id": { "name": "id", "columns": [ - "id" + "object_id" ], "isUnique": false }, @@ -62,18 +62,18 @@ }, "foreignKeys": {}, "compositePrimaryKeys": { - "object_item_id": { - "name": "object_item_id", + "object_item_object_id": { + "name": "object_item_object_id", "columns": [ - "id" + "object_id" ] } }, "uniqueConstraints": { - "object_item_id_object_list_id_unique": { - "name": "object_item_id_object_list_id_unique", + "object_item_object_id_object_list_id_unique": { + "name": "object_item_object_id_object_list_id_unique", "columns": [ - "id", + "object_id", "object_list_id" ] } diff --git a/packages/database/src/db/schema.ts b/packages/database/src/db/schema.ts index 3bad8c1ea..9c6f849a1 100644 --- a/packages/database/src/db/schema.ts +++ b/packages/database/src/db/schema.ts @@ -39,8 +39,8 @@ export const objectListsRelations = relations(objectLists, ({many}) => ({ export const objectItems = mysqlTable( 'object_item', { - id: varchar('id', {length: 32}).primaryKey(), - objectId: text('object_id').notNull(), + objectId: varchar('object_id', {length: 32}).primaryKey(), + objectIri: text('object_iri').notNull(), objectListId: int('object_list_id'), createdAt: timestamp('created_at') .default(sql`CURRENT_TIMESTAMP`) @@ -51,9 +51,9 @@ export const objectItems = mysqlTable( createdBy: varchar('created_by', {length: 50}).notNull(), }, item => ({ - id: index('id').on(item.id), + id: index('id').on(item.objectId), objectListId: index('object_list_id').on(item.objectListId), - unique: unique().on(item.id, item.objectListId), + unique: unique().on(item.objectId, item.objectListId), }) ); diff --git a/packages/database/src/object-list.ts b/packages/database/src/object-list.ts index 9a647313b..37b1ffb34 100644 --- a/packages/database/src/object-list.ts +++ b/packages/database/src/object-list.ts @@ -42,20 +42,20 @@ async function createListForCommunity({ interface AddObjectToListProps { listId: number; - objectId: string; + objectIri: string; userId: string; } async function addObjectToList({ listId, - objectId, + objectIri, userId, }: AddObjectToListProps) { const objectItem = insertObjectItemSchema.parse({ listId, - objectId, + objectIri, createdBy: userId, - id: iriToHash(objectId), + objectId: iriToHash(objectIri), }); return db.insert(objectItems).values(objectItem); From 960b3185efaaa4f0f88e37a087b3e2d4182cbff1 Mon Sep 17 00:00:00 2001 From: Barbara Honhoff Date: Thu, 21 Sep 2023 14:53:05 +0200 Subject: [PATCH 26/26] Add comment about bug in drizzle migrations --- packages/database/scripts/migrate.ts | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/packages/database/scripts/migrate.ts b/packages/database/scripts/migrate.ts index a2267fc09..24a98b159 100644 --- a/packages/database/scripts/migrate.ts +++ b/packages/database/scripts/migrate.ts @@ -7,7 +7,10 @@ async function runMigrations() { await migrate(db, { migrationsFolder: './../database/migrations', }); - exit(); + // [BUG]: `await migrate(..)` will keep process open. + // Temporary fix: exit process manually. + // https://github.com/drizzle-team/drizzle-orm/issues/1222 + exit(0); } catch (err) { console.error(err); exit(1);