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Add SQLite mixed-type compatibility for _get_table_columns_and_types #82

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merged 4 commits into from
Aug 2, 2023

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@d33bs d33bs commented Aug 1, 2023

Description

This PR adds changes which seek to further address #38. This extends the work found in #50 for greater compatibility with mixed-types in _get_table_columns_and_types.

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  • Bug fix (fixes an issue).
  • Enhancement (adds functionality).
  • Breaking change (fix or feature that would cause existing functionality to not work as expected).
  • This change requires a documentation update.

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@d33bs d33bs requested review from falquaddoomi and gwaybio August 1, 2023 02:11
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LGTM! One comment

cytotable/convert.py Show resolved Hide resolved
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d33bs commented Aug 2, 2023

Thank you @gwaybio for the review! Will merge pending no unexpected tests failing.

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d33bs commented Aug 2, 2023

Note: test failure is related to issues which we seek to address in #83 (missing database file for second SQLite S3 data source parsed from temporary cache location).

@d33bs d33bs merged commit 03f3428 into cytomining:main Aug 2, 2023
@d33bs d33bs deleted the mixed-type-column-prep-reads branch August 2, 2023 14:44
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2 participants