Development

Installation

Requirements

• Python 2.7 or 3.5/3.6
• Git

Pip

1. Fork the cytominer-database repository
2. Install the project and its dependencies:

   git clone [email protected]:USERNAME/cytominer-database.git
   cd cytominer-database
   pip install --upgrade -r requirements.txt
   

Tests

Pip

1. Run the tests:

   pytest -Wd
   

   or an individual test:

   pytest -Wd tests/TEST_FILENAME.py
   

Documentation

Pip

1. Build the HTML documentation (Linux/OS X):

   cd doc
   make html
   

   Build the HTML documentation (Windows):

   cd doc
   .\make.bat html