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DESCRIPTION
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DESCRIPTION
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Package: BingleSeq
Type: Package
Title: BingleSeq
RNA-Seq Data Analysis
Version: 0.3.6
Author: Daniel Dimitrov
Maintainer: Daniel Dimitrov <[email protected]>
Description: A user-friendly R package for Bulk and Single-cell
License: MIT
Encoding: UTF-8
LazyData: true
biocViews:
Imports: tidyverse, shiny, shinyjs, shinyFiles, shinyWidgets, waiter (>= 0.2.0),
DT, grDevices, ggplot2, VennDiagram, factoextra, fastcluster,
gridExtra, ggrepel, DESeq2, edgeR, limma, MAST (>= 1.14.0),
monocle, Seurat, scran, SC3, GenomeInfoDbData, geneLenDataBase,
GO.db, goseq, sva, Harman, pheatmap, dorothea, viper, progeny, plotly
Suggests: org.Mm.eg.db, org.Hs.eg.db, org.Dm.eg.db, org.Dr.eg.db, org.EcK12.eg.db
RoxygenNote: 7.1.1
Collate:
'bulk_compDataTab.R'
'bulk_deDataTab.R'
'bulk_filterDataTab.R'
'bulk_footprintTab.R'
'bulk_goDataTab.R'
'bulk_loadDataTab.R'
'bulk_plotDataTab.R'
'sc_clustTab.R'
'sc_compTab.R'
'sc_deTab.R'
'sc_footprintTab.R'
'sc_goTab.R'
'sc_loadDataTab.R'
'sc_normTab.R'
'sc_qcTab.R'
'server.R'
'ui.R'
'startApp.R'
NeedsCompilation: no
Packaged: 10/10/2020 08:54:51 UTC; Daniel