-
Notifications
You must be signed in to change notification settings - Fork 9
/
NAMESPACE
103 lines (102 loc) · 2.05 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
# Generated by roxygen2: do not edit by hand
export(barTable)
export(batchComBat)
export(batchHarman)
export(bulk_compData)
export(bulk_compDataUI)
export(bulk_deData)
export(bulk_deDataUI)
export(bulk_faDataUI)
export(bulk_filterData)
export(bulk_filterDataUI)
export(bulk_goDataUI)
export(bulk_loadData)
export(bulk_loadDataUI)
export(bulk_plotData)
export(bulk_plotDataUI)
export(clusterMonocle)
export(convert_gene_type)
export(deEdgeR)
export(deLimma)
export(dePipelineCaller)
export(deSequence)
export(fetch_regulons)
export(fetch_tf_activities)
export(fetch_tfs_per_sample)
export(filterFunction)
export(genePlot)
export(generateIntersect)
export(generateSummary)
export(getAllDE)
export(getClusterHeatmap)
export(getIntersect)
export(get_pathway_activity)
export(get_pathway_activity_per_sample)
export(get_progeny_scatter)
export(load10xData)
export(normalizeSeurat)
export(plotAllVenn)
export(plotBarChart)
export(plotHeatmapTop)
export(plotMA)
export(plotPCA)
export(plotScree)
export(plotVP)
export(plot_tfa_per_sample)
export(plot_top_tfs)
export(qcHist)
export(rankConsesus)
export(sc3Cluster)
export(sc_clust)
export(sc_clustUI)
export(sc_comp)
export(sc_compUI)
export(sc_de)
export(sc_deUI)
export(sc_faUI)
export(sc_getAllDE)
export(sc_goUI)
export(sc_loadData)
export(sc_loadDataUI)
export(sc_norm)
export(sc_normUI)
export(sc_qc)
export(sc_qcUI)
export(server)
export(seuratElbow)
export(seuratQC)
export(startBingleSeq)
export(sueratClust)
export(ui)
import(DESeq2)
import(DT)
import(GO.db)
import(GenomeInfoDbData)
import(Harman)
import(MAST)
import(SC3)
import(Seurat)
import(VennDiagram)
import(dorothea)
import(edgeR)
import(factoextra)
import(fastcluster)
import(geneLenDataBase)
import(ggplot2)
import(ggrepel)
import(goseq)
import(grDevices)
import(gridExtra)
import(limma)
import(monocle)
import(pheatmap)
import(plotly)
import(progeny)
import(scran)
import(shiny)
import(shinyFiles)
import(shinyWidgets)
import(shinyjs)
import(sva)
import(tidyverse)
import(waiter)