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visualize.sh
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# datapath="../Datasets/ISIC2019bea_mel_nevus_limpo"
# data="ISIC2019-Clean"
# ckpt="Finetuned_Models/EViT_SMAL_0.7_Default-Bacc_91/best_checkpoint.pth"
# logdir="visualization/$data/"
# echo "----------------- Output dir: $logdir --------------------"
# drop_loc="(3, 6, 9)"
# keep_rate=0.7
# python main.py \
# --visualize_complete \
# --model deit_small_patch16_shrink_base \
# --wandb \
# --finetune_dataset_name $data \
# --project_name "Thesis" \
# --run_name "$logdir" \
# --hardware "MyPC" \
# --num_workers 8 \
# --batch-size 8 \
# --input-size 224 \
# --base_keep_rate $keep_rate \
# --vis_num 5 \
# --lr_scheduler \
# --loss_scaler \
# --data-path $datapath \
# --resume $ckpt \
# --output_dir $logdir \
# echo "output dir for the last exp: $logdir/MIL-$inst-$pool"\
# datapath="../Datasets/derm7pt_like_ISIC2019"
# data="Derm7pt"
# ckpt="Finetuned_Models/EViT_SMAL_0.7_Default-Bacc_91/best_checkpoint.pth"
# logdir="visualization/$data/"
# echo "----------------- Output dir: $logdir --------------------"
# drop_loc="(3, 6, 9)"
# keep_rate=0.7
# python main.py \
# --visualize_complete \
# --model deit_small_patch16_shrink_base \
# --wandb \
# --finetune_dataset_name $data \
# --project_name "Thesis" \
# --run_name "$logdir" \
# --hardware "MyPC" \
# --num_workers 8 \
# --batch-size 8 \
# --input-size 224 \
# --base_keep_rate $keep_rate \
# --vis_num 5 \
# --lr_scheduler \
# --loss_scaler \
# --data-path $datapath \
# --resume $ckpt \
# --output_dir $logdir \
# echo "output dir for the last exp: $logdir/MIL-$inst-$pool"\
datapath="../Datasets/PH2_test"
data="PH2"
ckpt="../Models/EViT-KeepRate_0.7-best_checkpoint.pth"
logdir="visualization/$data/kr=07/No_Pos_Encoding/"
echo "----------------- Output dir: $logdir --------------------"
drop_loc="(3, 6, 9)"
keep_rate=0.7
python main.py \
--visualize_complete \
--model deit_small_patch16_shrink_base \
--pos_encoding_flag \
--wandb \
--finetune_dataset_name $data \
--project_name "Thesis" \
--run_name "$logdir" \
--hardware "MyPC" \
--num_workers 8 \
--batch-size 8 \
--input-size 224 \
--base_keep_rate $keep_rate \
--vis_num 5 \
--lr_scheduler \
--loss_scaler \
--data-path $datapath \
--resume $ckpt \
--output_dir $logdir \
echo "output dir for the last exp: $logdir/MIL-$inst-$pool"\