From 017ef66a19422c6ff171b8e0a0802a0d58a21505 Mon Sep 17 00:00:00 2001
From: Daniel Weindl <daniel.weindl@helmholtz-munich.de>
Date: Wed, 26 Jun 2024 14:50:02 +0200
Subject: [PATCH] run

---
 tests/benchmark-models/test_benchmark_collection.sh | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)

diff --git a/tests/benchmark-models/test_benchmark_collection.sh b/tests/benchmark-models/test_benchmark_collection.sh
index ec8432b723..f8ccd0c1cd 100755
--- a/tests/benchmark-models/test_benchmark_collection.sh
+++ b/tests/benchmark-models/test_benchmark_collection.sh
@@ -116,10 +116,15 @@ cd "$script_path" && python evaluate_benchmark.py
 model="Zheng_PNAS2012"
 problem_dir="${model_dir}/${model}"
 amici_model_dir=test_bmc/"${model}-deprecated"
-mkdir -p "$amici_model_dir"
 cmd_import="amici_import_petab -s "${problem_dir}/model_${model}.xml" \
   -m "${problem_dir}/measurementData_${model}.tsv" \
   -c "${problem_dir}/experimentalCondition_${model}.tsv" \
   -p "${problem_dir}/parameters_${model}.tsv" \
   -b "${problem_dir}/observables_${model}.tsv" \
   -o ${amici_model_dir} -n ${model} --no-compile"
+
+if [[ -z "$dry_run" ]]; then
+  $cmd_import
+else
+  echo "$cmd_import"
+fi