NAMESPACE

# Generated by roxygen2: do not edit by hand

export(coverage_norm)
export(coverage_process)
export(coverage_score)
export(junction_annot)
export(junction_filter)
export(junction_load)
export(junction_norm)
export(junction_process)
export(junction_score)
export(outlier_aggregate)
export(outlier_detect)
export(outlier_process)
export(plot_sashimi)
export(ref_load)
import(S4Vectors)
importFrom(GenomicRanges,"end<-")
importFrom(GenomicRanges,"start<-")
importFrom(GenomicRanges,"strand<-")
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,end)
importFrom(GenomicRanges,findOverlaps)
importFrom(GenomicRanges,seqnames)
importFrom(GenomicRanges,start)
importFrom(GenomicRanges,strand)
importFrom(GenomicRanges,width)
importFrom(IRanges,CharacterList)
importFrom(SummarizedExperiment,"assays<-")
importFrom(SummarizedExperiment,assays)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowRanges)
importFrom(basilisk,BasiliskEnvironment)
importFrom(basilisk,basiliskRun)
importFrom(basilisk,basiliskStart)
importFrom(basilisk,basiliskStop)
importFrom(data.table,":=")
importFrom(data.table,.SD)
importFrom(dplyr,count)
importFrom(magrittr,"%>%")
importFrom(methods,is)
importFrom(reticulate,import)