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This is happening because we are taking the configuration at compile time here. I believe this is the expected behaviour for Ecto 2.1. Once I can finally update things for Ecto 2.2+, you should not have this problem anymore.
ENV vars are not making a full connection through the Mongo.Ecto Adapter.
Distillery build with ENV Vars:
Returning Empty results -- Acts like Mongo is connected?
Test case built here:
https://github.com/mthomps4/MongoEcto-Envtest
Details outlined in README.md
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