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EMUNE builds upon the following tools:
- BayesFlow: bayesflow.readthedocs.io
Simulation-based Bayesian inference via invertible neural networks. - Morpheus: morpheus.gitlab.io
Simulation of multi-scale multi-cellular systems. - pyABC: pyabc.readthedocs.io
Simulation-based distributed approximate Bayesian computation.
Code for all method development and application projects under the EMUNE umbrella can be found in our GitHub organization.