diff --git a/ERF__ComputeTurbulentViscosity_8cpp.html b/ERF__ComputeTurbulentViscosity_8cpp.html index 423347d543..da84f1e9ae 100644 --- a/ERF__ComputeTurbulentViscosity_8cpp.html +++ b/ERF__ComputeTurbulentViscosity_8cpp.html @@ -390,10 +390,10 @@

ComputeTurbulentViscosityLES
void ComputeTurbulentViscosityLES(const MultiFab &Tau11, const MultiFab &Tau22, const MultiFab &Tau33, const MultiFab &Tau12, const MultiFab &Tau13, const MultiFab &Tau23, const MultiFab &cons_in, MultiFab &eddyViscosity, MultiFab &Hfx1, MultiFab &Hfx2, MultiFab &Hfx3, MultiFab &Diss, const Geometry &geom, const MultiFab &mapfac_u, const MultiFab &mapfac_v, const std::unique_ptr< MultiFab > &z_phys_nd, const TurbChoice &turbChoice, const Real const_grav, std::unique_ptr< ABLMost > &most, const bool &exp_most)
Definition: ERF_ComputeTurbulentViscosity.cpp:32
Vars::xvel
@ xvel
Definition: ERF_IndexDefines.H:130
Vars::yvel
@ yvel
Definition: ERF_IndexDefines.H:131
-
SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:639
-
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:570
-
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:633
-
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:534
+
SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:640
+
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:571
+
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:634
+
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:535
TurbChoice
Definition: ERF_TurbStruct.H:29
TurbChoice::pbl_type
PBLType pbl_type
Definition: ERF_TurbStruct.H:192
TurbChoice::les_type
LESType les_type
Definition: ERF_TurbStruct.H:169
diff --git a/ERF__DataStruct_8H_source.html b/ERF__DataStruct_8H_source.html index 1638903836..4a4e67c3bb 100644 --- a/ERF__DataStruct_8H_source.html +++ b/ERF__DataStruct_8H_source.html @@ -214,529 +214,530 @@
126  if (moisture_type == MoistureType::Kessler_NoRain ||
127  moisture_type == MoistureType::SAM ||
128  moisture_type == MoistureType::SAM_NoIce ||
-
129  moisture_type == MoistureType::SAM_NoPrecip_NoIce) {
-
130  buoyancy_type = 1; // asserted in make buoyancy
-
131  } else {
-
132  buoyancy_type = 2; // uses Tprime
-
133  }
-
134  }
-
135 
-
136  // Which expression (1,2 or 3) to use for buoyancy
-
137  pp.query("buoyancy_type", buoyancy_type);
-
138 
-
139  // What type of land surface model to use
-
140  lsm_type = LandSurfaceType::None; // Default
-
141  pp.query_enum_case_insensitive("land_surface_model",lsm_type);
-
142 
-
143  // Is the terrain none, static or moving?
-
144  pp.query_enum_case_insensitive("terrain_type",terrain_type);
-
145 
-
146  // Use lagged_delta_rt in the fast integrator?
-
147  pp.query("use_lagged_delta_rt", use_lagged_delta_rt);
-
148 
-
149  // These default to true but are used for unit testing
-
150  pp.query("use_gravity", use_gravity);
-
151  gravity = use_gravity? CONST_GRAV: 0.0;
-
152 
-
153  pp.query("c_p", c_p);
-
154  rdOcp = R_d / c_p;
-
155 
-
156  read_int_string(max_level, "anelastic", anelastic, 0);
-
157 
-
158  // *******************************************************************************
-
159  // Read substepping_type and allow for different values at each level
-
160  // *******************************************************************************
-
161  substepping_type.resize(max_level+1);
-
162 
-
163  for (int i = 0; i <= max_level; i++) {
-
164  substepping_type[i] = SubsteppingType::Implicit;
-
165  }
-
166 
-
167  int nvals = pp.countval("substepping_type");
-
168  AMREX_ALWAYS_ASSERT(nvals == 0 || nvals == 1 || nvals >= max_level+1);
-
169 
-
170  if (nvals == 1) {
-
171  pp.query_enum_case_insensitive("substepping_type",substepping_type[0]);
-
172  for (int i = 1; i <= max_level; i++) {
-
173  substepping_type[i] = substepping_type[0];
-
174  }
-
175  } else if (nvals > 1) { // in this case we have asserted nvals >= max_level+1
-
176  for (int i = 0; i <= max_level; i++) {
-
177  pp.query_enum_case_insensitive("substepping_type",substepping_type[i],i);
-
178  }
-
179  }
-
180 
-
181  // *******************************************************************************
-
182  // Error check on deprecated input
-
183  // *******************************************************************************
-
184  int nvals_old = pp.countval("no_substepping");
-
185  if (nvals_old > 0) {
-
186  amrex::Abort("The no_substepping flag is deprecated -- set substepping_type instead");
-
187  }
-
188  // *******************************************************************************
-
189 
-
190  bool any_anelastic = false;
-
191  for (int i = 0; i <= max_level; ++i) {
-
192  if (anelastic[i] == 1) any_anelastic = true;
-
193  }
-
194 
-
195  // If anelastic at all, we do not advect rho -- it is always == rho0
-
196  if (any_anelastic == 1) {
-
197  constant_density = true;
-
198  project_initial_velocity = true;
-
199  buoyancy_type = 2; // uses Tprime
-
200  } else {
-
201  pp.query("project_initial_velocity", project_initial_velocity);
-
202 
-
203  constant_density = false; // We default to false but allow the user to set it
-
204  pp.query("constant_density", constant_density);
-
205  }
-
206 
-
207  // *******************************************************************************
-
208 
-
209  pp.query("ncorr", ncorr);
-
210  pp.query("poisson_abstol", poisson_abstol);
-
211  pp.query("poisson_reltol", poisson_reltol);
-
212 
-
213  for (int lev = 0; lev <= max_level; lev++) {
-
214  if (anelastic[lev] != 0)
-
215  {
-
216  substepping_type[lev] = SubsteppingType::None;
-
217  }
-
218  }
-
219 
-
220  pp.query("force_stage1_single_substep", force_stage1_single_substep);
-
221 
-
222  // Include Coriolis forcing?
-
223  pp.query("use_coriolis", use_coriolis);
-
224 
-
225  // Include Rayleigh damping (separate flags for each variable)
-
226  pp.query("rayleigh_damp_U", rayleigh_damp_U);
-
227  pp.query("rayleigh_damp_V", rayleigh_damp_V);
-
228  pp.query("rayleigh_damp_W", rayleigh_damp_W);
-
229  pp.query("rayleigh_damp_T", rayleigh_damp_T);
-
230  pp.query("rayleigh_dampcoef", rayleigh_dampcoef);
-
231  pp.query("rayleigh_zdamp", rayleigh_zdamp);
-
232 
-
233  // Flag to do explicit MOST formulation
-
234  pp.query("use_explicit_most",use_explicit_most);
-
235 
-
236  // Flag to do MOST rotations with terrain
-
237  pp.query("use_rotate_most",use_rotate_most);
-
238  if (use_rotate_most) {
-
239  AMREX_ASSERT_WITH_MESSAGE(terrain_type != TerrainType::None,"MOST stress rotations are only valid with terrain!");
-
240  AMREX_ASSERT_WITH_MESSAGE(use_explicit_most, "MOST Stress rotations are only valid with explicit MOST!");
-
241  }
-
242 
-
243  // Which external forcings?
-
244  abl_driver_type = ABLDriverType::None; // Default: no ABL driver for simulating classical fluid dynamics problems
-
245  pp.query_enum_case_insensitive("abl_driver_type",abl_driver_type);
-
246 
-
247  // Which type of inflow turbulent generation
-
248  pert_type = PerturbationType::None; // Default
-
249  pp.query_enum_case_insensitive("perturbation_type",pert_type);
-
250 
-
251  amrex::Vector<amrex::Real> abl_pressure_grad_in = {0.0, 0.0, 0.0};
-
252  pp.queryarr("abl_pressure_grad",abl_pressure_grad_in);
-
253  for(int i = 0; i < AMREX_SPACEDIM; ++i) abl_pressure_grad[i] = abl_pressure_grad_in[i];
-
254 
-
255  amrex::Vector<amrex::Real> abl_geo_forcing_in = {0.0, 0.0, 0.0};
-
256  if(pp.queryarr("abl_geo_forcing",abl_geo_forcing_in)) {
-
257  amrex::Print() << "Specified abl_geo_forcing: (";
-
258  for (int i = 0; i < AMREX_SPACEDIM; ++i) {
-
259  abl_geo_forcing[i] = abl_geo_forcing_in[i];
-
260  amrex::Print() << abl_geo_forcing[i] << " ";
-
261  }
-
262  amrex::Print() << ")" << std::endl;
-
263  }
-
264 
-
265  if (use_coriolis)
-
266  {
-
267  build_coriolis_forcings();
-
268  }
-
269 
-
270  pp.query("add_custom_rhotheta_forcing", custom_rhotheta_forcing);
-
271  pp.query("add_custom_moisture_forcing", custom_moisture_forcing);
-
272  pp.query("add_custom_w_subsidence", custom_w_subsidence);
-
273  pp.query("add_custom_geostrophic_profile", custom_geostrophic_profile);
-
274  pp.query("custom_forcing_uses_primitive_vars", custom_forcing_prim_vars);
-
275 
-
276  pp.query("nudging_from_input_sounding", nudging_from_input_sounding);
-
277 
-
278  have_geo_wind_profile = (!abl_geo_wind_table.empty() || custom_geostrophic_profile);
-
279  AMREX_ALWAYS_ASSERT_WITH_MESSAGE(!(!abl_geo_wind_table.empty() && custom_geostrophic_profile),
-
280  "Should not have both abl_geo_wind_table and custom_geostrophic_profile set.");
-
281 
-
282  pp.query("Ave_Plane", ave_plane);
-
283 
-
284  pp.query("mp_clouds", do_cloud);
-
285  pp.query("mp_precip", do_precip);
-
286  pp.query("use_moist_background", use_moist_background);
-
287 
-
288  // Use numerical diffusion?
-
289  pp.query("use_NumDiff",use_NumDiff);
-
290  if(use_NumDiff) {
-
291  pp.query("NumDiffCoeff",NumDiffCoeff);
-
292  AMREX_ASSERT_WITH_MESSAGE(( (NumDiffCoeff >= 0.) && (NumDiffCoeff <= 1.) ),
-
293  "Numerical diffusion coefficient must be between 0 & 1.");
-
294  NumDiffCoeff *= std::pow(2.0,-6);
-
295  }
-
296 
-
297  // Use monotonic advection?
-
298  pp.query("use_mono_adv",use_mono_adv);
-
299 
-
300  advChoice.init_params();
-
301  diffChoice.init_params();
-
302  spongeChoice.init_params();
-
303 
-
304  turbChoice.resize(max_level+1);
-
305  for (int lev = 0; lev <= max_level; lev++) {
-
306  turbChoice[lev].init_params(lev,max_level);
-
307  }
-
308 
-
309  // YSU PBL: use consistent coriolis frequency
-
310  for (int lev = 0; lev <= max_level; lev++) {
-
311  if (turbChoice[lev].pbl_ysu_use_consistent_coriolis) {
-
312  if (use_coriolis) {
-
313  turbChoice[lev].pbl_ysu_coriolis_freq = coriolis_factor * sinphi;
-
314  if (lev == 0) {
-
315  amrex::Print() << "YSU PBL using ERF coriolis frequency: " << turbChoice[lev].pbl_ysu_coriolis_freq << std::endl;
-
316  }
-
317  } else {
-
318  amrex::Abort("YSU cannot use ERF coriolis frequency if not using coriolis");
-
319  }
-
320  }
-
321  }
-
322 
+
129  moisture_type == MoistureType::SAM_NoPrecip_NoIce)
+
130  {
+
131  buoyancy_type = 1; // uses Rhoprime
+
132  } else {
+
133  buoyancy_type = 2; // uses Tprime
+
134  }
+
135  }
+
136 
+
137  // Which expression (1,2/3 or 4) to use for buoyancy
+
138  pp.query("buoyancy_type", buoyancy_type);
+
139 
+
140  // What type of land surface model to use
+
141  lsm_type = LandSurfaceType::None; // Default
+
142  pp.query_enum_case_insensitive("land_surface_model",lsm_type);
+
143 
+
144  // Is the terrain none, static or moving?
+
145  pp.query_enum_case_insensitive("terrain_type",terrain_type);
+
146 
+
147  // Use lagged_delta_rt in the fast integrator?
+
148  pp.query("use_lagged_delta_rt", use_lagged_delta_rt);
+
149 
+
150  // These default to true but are used for unit testing
+
151  pp.query("use_gravity", use_gravity);
+
152  gravity = use_gravity? CONST_GRAV: 0.0;
+
153 
+
154  pp.query("c_p", c_p);
+
155  rdOcp = R_d / c_p;
+
156 
+
157  read_int_string(max_level, "anelastic", anelastic, 0);
+
158 
+
159  // *******************************************************************************
+
160  // Read substepping_type and allow for different values at each level
+
161  // *******************************************************************************
+
162  substepping_type.resize(max_level+1);
+
163 
+
164  for (int i = 0; i <= max_level; i++) {
+
165  substepping_type[i] = SubsteppingType::Implicit;
+
166  }
+
167 
+
168  int nvals = pp.countval("substepping_type");
+
169  AMREX_ALWAYS_ASSERT(nvals == 0 || nvals == 1 || nvals >= max_level+1);
+
170 
+
171  if (nvals == 1) {
+
172  pp.query_enum_case_insensitive("substepping_type",substepping_type[0]);
+
173  for (int i = 1; i <= max_level; i++) {
+
174  substepping_type[i] = substepping_type[0];
+
175  }
+
176  } else if (nvals > 1) { // in this case we have asserted nvals >= max_level+1
+
177  for (int i = 0; i <= max_level; i++) {
+
178  pp.query_enum_case_insensitive("substepping_type",substepping_type[i],i);
+
179  }
+
180  }
+
181 
+
182  // *******************************************************************************
+
183  // Error check on deprecated input
+
184  // *******************************************************************************
+
185  int nvals_old = pp.countval("no_substepping");
+
186  if (nvals_old > 0) {
+
187  amrex::Abort("The no_substepping flag is deprecated -- set substepping_type instead");
+
188  }
+
189  // *******************************************************************************
+
190 
+
191  bool any_anelastic = false;
+
192  for (int i = 0; i <= max_level; ++i) {
+
193  if (anelastic[i] == 1) any_anelastic = true;
+
194  }
+
195 
+
196  // If anelastic at all, we do not advect rho -- it is always == rho0
+
197  if (any_anelastic == 1) {
+
198  constant_density = true;
+
199  project_initial_velocity = true;
+
200  buoyancy_type = 3; // (This isn't actually used when anelastic is set)
+
201  } else {
+
202  pp.query("project_initial_velocity", project_initial_velocity);
+
203 
+
204  constant_density = false; // We default to false but allow the user to set it
+
205  pp.query("constant_density", constant_density);
+
206  }
+
207 
+
208  // *******************************************************************************
+
209 
+
210  pp.query("ncorr", ncorr);
+
211  pp.query("poisson_abstol", poisson_abstol);
+
212  pp.query("poisson_reltol", poisson_reltol);
+
213 
+
214  for (int lev = 0; lev <= max_level; lev++) {
+
215  if (anelastic[lev] != 0)
+
216  {
+
217  substepping_type[lev] = SubsteppingType::None;
+
218  }
+
219  }
+
220 
+
221  pp.query("force_stage1_single_substep", force_stage1_single_substep);
+
222 
+
223  // Include Coriolis forcing?
+
224  pp.query("use_coriolis", use_coriolis);
+
225 
+
226  // Include Rayleigh damping (separate flags for each variable)
+
227  pp.query("rayleigh_damp_U", rayleigh_damp_U);
+
228  pp.query("rayleigh_damp_V", rayleigh_damp_V);
+
229  pp.query("rayleigh_damp_W", rayleigh_damp_W);
+
230  pp.query("rayleigh_damp_T", rayleigh_damp_T);
+
231  pp.query("rayleigh_dampcoef", rayleigh_dampcoef);
+
232  pp.query("rayleigh_zdamp", rayleigh_zdamp);
+
233 
+
234  // Flag to do explicit MOST formulation
+
235  pp.query("use_explicit_most",use_explicit_most);
+
236 
+
237  // Flag to do MOST rotations with terrain
+
238  pp.query("use_rotate_most",use_rotate_most);
+
239  if (use_rotate_most) {
+
240  AMREX_ASSERT_WITH_MESSAGE(terrain_type != TerrainType::None,"MOST stress rotations are only valid with terrain!");
+
241  AMREX_ASSERT_WITH_MESSAGE(use_explicit_most, "MOST Stress rotations are only valid with explicit MOST!");
+
242  }
+
243 
+
244  // Which external forcings?
+
245  abl_driver_type = ABLDriverType::None; // Default: no ABL driver for simulating classical fluid dynamics problems
+
246  pp.query_enum_case_insensitive("abl_driver_type",abl_driver_type);
+
247 
+
248  // Which type of inflow turbulent generation
+
249  pert_type = PerturbationType::None; // Default
+
250  pp.query_enum_case_insensitive("perturbation_type",pert_type);
+
251 
+
252  amrex::Vector<amrex::Real> abl_pressure_grad_in = {0.0, 0.0, 0.0};
+
253  pp.queryarr("abl_pressure_grad",abl_pressure_grad_in);
+
254  for(int i = 0; i < AMREX_SPACEDIM; ++i) abl_pressure_grad[i] = abl_pressure_grad_in[i];
+
255 
+
256  amrex::Vector<amrex::Real> abl_geo_forcing_in = {0.0, 0.0, 0.0};
+
257  if(pp.queryarr("abl_geo_forcing",abl_geo_forcing_in)) {
+
258  amrex::Print() << "Specified abl_geo_forcing: (";
+
259  for (int i = 0; i < AMREX_SPACEDIM; ++i) {
+
260  abl_geo_forcing[i] = abl_geo_forcing_in[i];
+
261  amrex::Print() << abl_geo_forcing[i] << " ";
+
262  }
+
263  amrex::Print() << ")" << std::endl;
+
264  }
+
265 
+
266  if (use_coriolis)
+
267  {
+
268  build_coriolis_forcings();
+
269  }
+
270 
+
271  pp.query("add_custom_rhotheta_forcing", custom_rhotheta_forcing);
+
272  pp.query("add_custom_moisture_forcing", custom_moisture_forcing);
+
273  pp.query("add_custom_w_subsidence", custom_w_subsidence);
+
274  pp.query("add_custom_geostrophic_profile", custom_geostrophic_profile);
+
275  pp.query("custom_forcing_uses_primitive_vars", custom_forcing_prim_vars);
+
276 
+
277  pp.query("nudging_from_input_sounding", nudging_from_input_sounding);
+
278 
+
279  have_geo_wind_profile = (!abl_geo_wind_table.empty() || custom_geostrophic_profile);
+
280  AMREX_ALWAYS_ASSERT_WITH_MESSAGE(!(!abl_geo_wind_table.empty() && custom_geostrophic_profile),
+
281  "Should not have both abl_geo_wind_table and custom_geostrophic_profile set.");
+
282 
+
283  pp.query("Ave_Plane", ave_plane);
+
284 
+
285  pp.query("mp_clouds", do_cloud);
+
286  pp.query("mp_precip", do_precip);
+
287  pp.query("use_moist_background", use_moist_background);
+
288 
+
289  // Use numerical diffusion?
+
290  pp.query("use_NumDiff",use_NumDiff);
+
291  if(use_NumDiff) {
+
292  pp.query("NumDiffCoeff",NumDiffCoeff);
+
293  AMREX_ASSERT_WITH_MESSAGE(( (NumDiffCoeff >= 0.) && (NumDiffCoeff <= 1.) ),
+
294  "Numerical diffusion coefficient must be between 0 & 1.");
+
295  NumDiffCoeff *= std::pow(2.0,-6);
+
296  }
+
297 
+
298  // Use monotonic advection?
+
299  pp.query("use_mono_adv",use_mono_adv);
+
300 
+
301  advChoice.init_params();
+
302  diffChoice.init_params();
+
303  spongeChoice.init_params();
+
304 
+
305  turbChoice.resize(max_level+1);
+
306  for (int lev = 0; lev <= max_level; lev++) {
+
307  turbChoice[lev].init_params(lev,max_level);
+
308  }
+
309 
+
310  // YSU PBL: use consistent coriolis frequency
+
311  for (int lev = 0; lev <= max_level; lev++) {
+
312  if (turbChoice[lev].pbl_ysu_use_consistent_coriolis) {
+
313  if (use_coriolis) {
+
314  turbChoice[lev].pbl_ysu_coriolis_freq = coriolis_factor * sinphi;
+
315  if (lev == 0) {
+
316  amrex::Print() << "YSU PBL using ERF coriolis frequency: " << turbChoice[lev].pbl_ysu_coriolis_freq << std::endl;
+
317  }
+
318  } else {
+
319  amrex::Abort("YSU cannot use ERF coriolis frequency if not using coriolis");
+
320  }
+
321  }
+
322  }
323 
-
324  // Which type of multilevel coupling
-
325  coupling_type = CouplingType::TwoWay; // Default
-
326  pp.query_enum_case_insensitive("coupling_type",coupling_type);
-
327 
-
328  // Which type of windfarm model
-
329  windfarm_type = WindFarmType::None; // Default
-
330  pp.query_enum_case_insensitive("windfarm_type",windfarm_type);
-
331 
-
332  static std::string windfarm_loc_type_string = "None";
-
333  windfarm_loc_type = WindFarmLocType::None;
-
334  pp.query_enum_case_insensitive("windfarm_loc_type",windfarm_loc_type);
-
335 
-
336  pp.query("windfarm_loc_table", windfarm_loc_table);
-
337  pp.query("windfarm_spec_table", windfarm_spec_table);
-
338  pp.query("windfarm_blade_table", windfarm_blade_table);
-
339  pp.query("windfarm_airfoil_tables", windfarm_airfoil_tables);
-
340  pp.query("windfarm_spec_table_extra", windfarm_spec_table_extra);
-
341 
-
342  // Sampling distance upstream of the turbine to find the
-
343  // incoming free stream velocity as a factor of the diameter of the
-
344  // turbine. ie. the sampling distance will be this number multiplied
-
345  // by the diameter of the turbine
-
346  pp.query("sampling_distance_by_D", sampling_distance_by_D);
-
347  pp.query("turb_disk_angle_from_x", turb_disk_angle);
-
348 
-
349  pp.query("windfarm_x_shift",windfarm_x_shift);
-
350  pp.query("windfarm_y_shift",windfarm_y_shift);
-
351  // Test if time averaged data is to be output
-
352  pp.query("time_avg_vel",time_avg_vel);
-
353 
-
354  check_params(max_level);
-
355  }
-
356 
-
357  void check_params(int max_level)
-
358  {
-
359  // Warn for PBL models and moisture - these may not yet be compatible
-
360  for (int lev = 0; lev <= max_level; lev++) {
-
361  if ((moisture_type != MoistureType::None) && (turbChoice[lev].pbl_type != PBLType::None)) {
-
362  amrex::Warning("\n*** WARNING: Moisture may not yet be compatible with PBL models, \n proceed with caution ***");
-
363  }
-
364  }
-
365  //
-
366  // Buoyancy type check
-
367  //
-
368  if (buoyancy_type != 1 && buoyancy_type != 2 && buoyancy_type != 3 && buoyancy_type != 4) {
-
369  amrex::Abort("buoyancy_type must be 1, 2, 3 or 4");
-
370  }
-
371 
-
372  if (!use_lagged_delta_rt && !(terrain_type == TerrainType::Moving)) {
-
373  amrex::Error("Can't turn off lagged_delta_rt when terrain not moving");
-
374  }
-
375 
-
376  //
-
377  // Wind farm checks
-
378  //
-
379  if (windfarm_type==WindFarmType::SimpleAD and sampling_distance_by_D < 0.0) {
-
380  amrex::Abort("To use simplified actuator disks, you need to provide a variable"
-
381  " erf.sampling_distance_by_D in the inputs which specifies the upstream"
-
382  " distance as a factor of the turbine diameter at which the incoming free stream"
-
383  " velocity will be computed at.");
-
384  }
-
385  if ( (windfarm_type==WindFarmType::SimpleAD ||
-
386  windfarm_type==WindFarmType::GeneralAD ) && turb_disk_angle < 0.0) {
-
387  amrex::Abort("To use simplified actuator disks, you need to provide a variable"
-
388  " erf.turb_disk_angle_from_x in the inputs which is the angle of the face of the"
-
389  " turbine disk from the x-axis. A turbine facing an oncoming flow in the x-direction"
-
390  " will have turb_disk_angle value of 90 deg.");
-
391  }
-
392  if (windfarm_loc_type == WindFarmLocType::lat_lon and (windfarm_x_shift < 0.0 or windfarm_y_shift < 0.0)) {
-
393  amrex::Abort("You are using windfarms with latitude-logitude option to position the turbines."
-
394  " For this you should provide the inputs erf.windfarm_x_shift and"
-
395  " erf.windfarm_y_shift which are the values by which the bounding box of the"
-
396  " windfarm is shifted from the x and the y axes.");
-
397  }
-
398  }
-
399 
-
400  void display(int max_level)
-
401  {
-
402  amrex::Print() << "SOLVER CHOICE: " << std::endl;
-
403  amrex::Print() << "force_stage1_single_substep : " << force_stage1_single_substep << std::endl;
-
404  for (int lev = 0; lev <= max_level; lev++) {
-
405  amrex::Print() << "anelastic at level : " << lev << " is " << anelastic[lev] << std::endl;
-
406  if (substepping_type[lev] == SubsteppingType::None) {
-
407  amrex::Print() << "No substepping at level " << lev << std::endl;
-
408  } else if (substepping_type[lev] == SubsteppingType::Explicit) {
-
409  amrex::Print() << "Explicit substepping at level " << lev << std::endl;
-
410  } else if (substepping_type[lev] == SubsteppingType::Implicit) {
-
411  amrex::Print() << "Implicit substepping at level " << lev << std::endl;
-
412  }
-
413  }
-
414  amrex::Print() << "use_coriolis : " << use_coriolis << std::endl;
-
415  amrex::Print() << "use_gravity : " << use_gravity << std::endl;
-
416 
-
417  amrex::Print() << "Terrain Type: " << std::endl;
-
418  if (terrain_type == TerrainType::Static) {
-
419  amrex::Print() << " Static" << std::endl;
-
420  } else if (terrain_type == TerrainType::Moving) {
-
421  amrex::Print() << " Moving" << std::endl;
-
422  } else {
-
423  amrex::Print() << " None" << std::endl;
-
424  }
-
425 
-
426  amrex::Print() << "ABL Driver Type: " << std::endl;
-
427  if (abl_driver_type == ABLDriverType::None) {
-
428  amrex::Print() << " None" << std::endl;
-
429  } else if (abl_driver_type == ABLDriverType::PressureGradient) {
-
430  amrex::Print() << " Pressure Gradient "
-
431  << amrex::RealVect(abl_pressure_grad[0],abl_pressure_grad[1],abl_pressure_grad[2])
-
432  << std::endl;
-
433  } else if (abl_driver_type == ABLDriverType::GeostrophicWind) {
-
434  amrex::Print() << " Geostrophic Wind "
-
435  << amrex::RealVect(abl_geo_forcing[0],abl_geo_forcing[1],abl_geo_forcing[2])
-
436  << std::endl;
-
437  }
-
438 
-
439  if (max_level > 0) {
-
440  amrex::Print() << "Coupling Type: " << std::endl;
-
441  if (coupling_type == CouplingType::TwoWay) {
-
442  amrex::Print() << " Two-way" << std::endl;
-
443  } else if (coupling_type == CouplingType::OneWay) {
-
444  amrex::Print() << " One-way" << std::endl;
-
445  }
-
446  }
-
447 
-
448  amrex::Print() << "Buoyancy_type : " << buoyancy_type << std::endl;
-
449 
-
450  advChoice.display();
-
451  diffChoice.display();
-
452  spongeChoice.display();
-
453 
-
454  for (int lev = 0; lev <= max_level; lev++) {
-
455  turbChoice[lev].display(lev);
-
456  }
-
457  }
-
458 
-
459  void build_coriolis_forcings()
-
460  {
-
461  amrex::ParmParse pp(pp_prefix);
-
462 
-
463  // Read the rotational time period (in seconds)
-
464  amrex::Real rot_time_period = 86400.0;
-
465  pp.query("rotational_time_period", rot_time_period);
-
466 
-
467  coriolis_factor = 2.0 * 2.0 * PI / rot_time_period;
-
468  amrex::Print() << "Coriolis factor = " << coriolis_factor << std::endl;
-
469 
-
470  amrex::Real latitude = 90.0;
-
471  pp.query("latitude", latitude);
-
472 
-
473  pp.query("coriolis_3d", coriolis_3d);
-
474 
-
475  // Convert to radians
-
476  latitude *= (PI/180.);
-
477  sinphi = std::sin(latitude);
-
478  if (coriolis_3d) {
-
479  cosphi = std::cos(latitude);
-
480  }
-
481 
-
482  amrex::Print() << "Coriolis frequency, f = " << coriolis_factor * sinphi << " 1/s" << std::endl;
-
483 
-
484  if (abl_driver_type == ABLDriverType::GeostrophicWind) {
-
485  // Read in the geostrophic wind -- we only use this to construct
-
486  // the forcing term so no need to keep it
-
487  amrex::Vector<amrex::Real> abl_geo_wind(3);
-
488  pp.queryarr("abl_geo_wind",abl_geo_wind);
-
489 
-
490  if(!pp.query("abl_geo_wind_table",abl_geo_wind_table)) {
-
491  abl_geo_forcing = {
-
492  -coriolis_factor * (abl_geo_wind[1]*sinphi - abl_geo_wind[2]*cosphi),
-
493  coriolis_factor * abl_geo_wind[0]*sinphi,
-
494  -coriolis_factor * abl_geo_wind[0]*cosphi
-
495  };
-
496  } else {
-
497  amrex::Print() << "NOTE: abl_geo_wind_table provided, ignoring input abl_geo_wind" << std::endl;
-
498  }
-
499  }
-
500  }
-
501 
-
502  void read_int_string (int max_level, const char* string_to_read,
-
503  amrex::Vector<int>& vec_to_fill, int default_int)
-
504  {
-
505  amrex::ParmParse pp("erf");
-
506  int nvals = pp.countval(string_to_read);
-
507  AMREX_ALWAYS_ASSERT(nvals == 0 || nvals == 1 || nvals >= max_level+1);
-
508  amrex::Vector<int> temp; temp.resize(nvals);
-
509  pp.queryarr(string_to_read,temp);
-
510  if (nvals == 0) {
-
511  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(default_int);
-
512  } else if (nvals == 1) {
-
513  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(temp[0]);
-
514  } else {
-
515  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(temp[i]);
-
516  }
-
517  }
-
518 
-
519  inline static
-
520  bool terrain_is_flat = false;
-
521 
-
522  inline static
-
523  TerrainType terrain_type = TerrainType::None;
-
524 
-
525  static
-
526  void set_flat_terrain_flag ()
-
527  {
-
528  terrain_is_flat = true;
-
529  }
-
530 
-
531  AdvChoice advChoice;
-
532  DiffChoice diffChoice;
-
533  SpongeChoice spongeChoice;
-
534  amrex::Vector<TurbChoice> turbChoice;
-
535 
-
536  // Default prefix
-
537  std::string pp_prefix {"erf"};
-
538 
-
539  int force_stage1_single_substep = 1;
-
540 
-
541  amrex::Vector<SubsteppingType> substepping_type;
-
542  amrex::Vector<int> anelastic;
-
543 
-
544  int constant_density = 0;
-
545  int ncorr = 1;
-
546  amrex::Real poisson_abstol = 1e-10;
-
547  amrex::Real poisson_reltol = 1e-10;
-
548 
-
549  bool test_mapfactor = false;
-
550 
-
551  int buoyancy_type = 1; // uses rhoprime directly
-
552 
-
553  // Specify what additional physics/forcing modules we use
-
554  bool use_gravity = false;
-
555  bool use_coriolis = false;
-
556  bool coriolis_3d = true;
-
557 
-
558  bool rayleigh_damp_U = false;
-
559  bool rayleigh_damp_V = false;
-
560  bool rayleigh_damp_W = false;
-
561  bool rayleigh_damp_T = false;
-
562  amrex::Real rayleigh_dampcoef = 0.2; // inverse time scale [1/s]
-
563  amrex::Real rayleigh_zdamp = 500.0; // damping layer depth [m]
-
564  amrex::Real rayleigh_ztop;
-
565 
-
566  // This defaults to true but can be set to false for moving terrain cases only
-
567  bool use_lagged_delta_rt = true;
-
568 
-
569  // Constants
-
570  amrex::Real gravity;
-
571  amrex::Real c_p = Cp_d; // specific heat at constant pressure for dry air [J/(kg-K)]
-
572  amrex::Real rdOcp;
-
573 
-
574  // Staggered z levels for vertical grid stretching
-
575  amrex::Real grid_stretching_ratio = 0;
-
576  amrex::Real zsurf = 0.0;
-
577  amrex::Real dz0;
-
578 
-
579  bool project_initial_velocity = false;
-
580 
-
581  // Coriolis forcing
-
582  amrex::Real coriolis_factor = 0.0;
-
583  amrex::Real cosphi = 0.0;
-
584  amrex::Real sinphi = 0.0;
-
585 
-
586  // User-specified forcings in problem definition
-
587  bool custom_rhotheta_forcing = false;
-
588  bool custom_moisture_forcing = false;
-
589  bool custom_w_subsidence = false;
-
590  bool custom_geostrophic_profile = false;
-
591  bool custom_forcing_prim_vars = false;
-
592 
-
593  // Do we use source terms to nudge the solution towards
-
594  // the time-varying data provided in input sounding files?
-
595  bool nudging_from_input_sounding = false;
-
596 
-
597  // User specified MOST BC type
-
598  bool use_explicit_most = false;
-
599 
-
600  // MOST stress rotations
-
601  bool use_rotate_most = false;
-
602 
-
603  // User wishes to output time averaged velocity fields
-
604  bool time_avg_vel = false;
-
605 
-
606  // Type of perturbation
-
607  PerturbationType pert_type;
-
608 
-
609  // Numerical diffusion
-
610  bool use_NumDiff{false};
-
611  amrex::Real NumDiffCoeff{0.};
-
612 
-
613  // Monotonic advection limiter
-
614  bool use_mono_adv{false};
-
615 
-
616  CouplingType coupling_type;
-
617  MoistureType moisture_type;
-
618  WindFarmType windfarm_type;
-
619  WindFarmLocType windfarm_loc_type;
-
620  LandSurfaceType lsm_type;
-
621 
-
622  ABLDriverType abl_driver_type;
-
623  amrex::GpuArray<amrex::Real, AMREX_SPACEDIM> abl_pressure_grad;
-
624  amrex::GpuArray<amrex::Real, AMREX_SPACEDIM> abl_geo_forcing;
-
625  std::string abl_geo_wind_table;
-
626  bool have_geo_wind_profile {false};
-
627 
-
628  int ave_plane {2};
-
629  // Microphysics params
-
630  bool do_cloud {true};
-
631  bool do_precip {true};
-
632  bool use_moist_background {false};
-
633  int RhoQv_comp {-1};
-
634 
-
635  // This component will be model-dependent:
-
636  // if a model with no rain, this will stay -1
-
637  // if Kessler, then it will be set to RhoQ3
-
638  // if SAM, then it will be set to RhoQ4
-
639  int RhoQr_comp {-1};
-
640 
-
641  std::string windfarm_loc_table, windfarm_spec_table, windfarm_spec_table_extra;
-
642  std::string windfarm_blade_table, windfarm_airfoil_tables;
-
643  amrex::Real sampling_distance_by_D = -1.0;
-
644  amrex::Real turb_disk_angle = -1.0;
-
645  amrex::Real windfarm_x_shift = -1.0;
-
646  amrex::Real windfarm_y_shift = -1.0;
-
647 
-
648  // Flag for valid canopy model
-
649  bool do_forest {false};
-
650 };
-
651 #endif
+
324 
+
325  // Which type of multilevel coupling
+
326  coupling_type = CouplingType::TwoWay; // Default
+
327  pp.query_enum_case_insensitive("coupling_type",coupling_type);
+
328 
+
329  // Which type of windfarm model
+
330  windfarm_type = WindFarmType::None; // Default
+
331  pp.query_enum_case_insensitive("windfarm_type",windfarm_type);
+
332 
+
333  static std::string windfarm_loc_type_string = "None";
+
334  windfarm_loc_type = WindFarmLocType::None;
+
335  pp.query_enum_case_insensitive("windfarm_loc_type",windfarm_loc_type);
+
336 
+
337  pp.query("windfarm_loc_table", windfarm_loc_table);
+
338  pp.query("windfarm_spec_table", windfarm_spec_table);
+
339  pp.query("windfarm_blade_table", windfarm_blade_table);
+
340  pp.query("windfarm_airfoil_tables", windfarm_airfoil_tables);
+
341  pp.query("windfarm_spec_table_extra", windfarm_spec_table_extra);
+
342 
+
343  // Sampling distance upstream of the turbine to find the
+
344  // incoming free stream velocity as a factor of the diameter of the
+
345  // turbine. ie. the sampling distance will be this number multiplied
+
346  // by the diameter of the turbine
+
347  pp.query("sampling_distance_by_D", sampling_distance_by_D);
+
348  pp.query("turb_disk_angle_from_x", turb_disk_angle);
+
349 
+
350  pp.query("windfarm_x_shift",windfarm_x_shift);
+
351  pp.query("windfarm_y_shift",windfarm_y_shift);
+
352  // Test if time averaged data is to be output
+
353  pp.query("time_avg_vel",time_avg_vel);
+
354 
+
355  check_params(max_level);
+
356  }
+
357 
+
358  void check_params(int max_level)
+
359  {
+
360  // Warn for PBL models and moisture - these may not yet be compatible
+
361  for (int lev = 0; lev <= max_level; lev++) {
+
362  if ((moisture_type != MoistureType::None) && (turbChoice[lev].pbl_type != PBLType::None)) {
+
363  amrex::Warning("\n*** WARNING: Moisture may not yet be compatible with PBL models, \n proceed with caution ***");
+
364  }
+
365  }
+
366  //
+
367  // Buoyancy type check
+
368  //
+
369  if (buoyancy_type != 1 && buoyancy_type != 2 && buoyancy_type != 3 && buoyancy_type != 4) {
+
370  amrex::Abort("buoyancy_type must be 1, 2, 3 or 4");
+
371  }
+
372 
+
373  if (!use_lagged_delta_rt && !(terrain_type == TerrainType::Moving)) {
+
374  amrex::Error("Can't turn off lagged_delta_rt when terrain not moving");
+
375  }
+
376 
+
377  //
+
378  // Wind farm checks
+
379  //
+
380  if (windfarm_type==WindFarmType::SimpleAD and sampling_distance_by_D < 0.0) {
+
381  amrex::Abort("To use simplified actuator disks, you need to provide a variable"
+
382  " erf.sampling_distance_by_D in the inputs which specifies the upstream"
+
383  " distance as a factor of the turbine diameter at which the incoming free stream"
+
384  " velocity will be computed at.");
+
385  }
+
386  if ( (windfarm_type==WindFarmType::SimpleAD ||
+
387  windfarm_type==WindFarmType::GeneralAD ) && turb_disk_angle < 0.0) {
+
388  amrex::Abort("To use simplified actuator disks, you need to provide a variable"
+
389  " erf.turb_disk_angle_from_x in the inputs which is the angle of the face of the"
+
390  " turbine disk from the x-axis. A turbine facing an oncoming flow in the x-direction"
+
391  " will have turb_disk_angle value of 90 deg.");
+
392  }
+
393  if (windfarm_loc_type == WindFarmLocType::lat_lon and (windfarm_x_shift < 0.0 or windfarm_y_shift < 0.0)) {
+
394  amrex::Abort("You are using windfarms with latitude-logitude option to position the turbines."
+
395  " For this you should provide the inputs erf.windfarm_x_shift and"
+
396  " erf.windfarm_y_shift which are the values by which the bounding box of the"
+
397  " windfarm is shifted from the x and the y axes.");
+
398  }
+
399  }
+
400 
+
401  void display(int max_level)
+
402  {
+
403  amrex::Print() << "SOLVER CHOICE: " << std::endl;
+
404  amrex::Print() << "force_stage1_single_substep : " << force_stage1_single_substep << std::endl;
+
405  for (int lev = 0; lev <= max_level; lev++) {
+
406  amrex::Print() << "anelastic at level : " << lev << " is " << anelastic[lev] << std::endl;
+
407  if (substepping_type[lev] == SubsteppingType::None) {
+
408  amrex::Print() << "No substepping at level " << lev << std::endl;
+
409  } else if (substepping_type[lev] == SubsteppingType::Explicit) {
+
410  amrex::Print() << "Explicit substepping at level " << lev << std::endl;
+
411  } else if (substepping_type[lev] == SubsteppingType::Implicit) {
+
412  amrex::Print() << "Implicit substepping at level " << lev << std::endl;
+
413  }
+
414  }
+
415  amrex::Print() << "use_coriolis : " << use_coriolis << std::endl;
+
416  amrex::Print() << "use_gravity : " << use_gravity << std::endl;
+
417 
+
418  amrex::Print() << "Terrain Type: " << std::endl;
+
419  if (terrain_type == TerrainType::Static) {
+
420  amrex::Print() << " Static" << std::endl;
+
421  } else if (terrain_type == TerrainType::Moving) {
+
422  amrex::Print() << " Moving" << std::endl;
+
423  } else {
+
424  amrex::Print() << " None" << std::endl;
+
425  }
+
426 
+
427  amrex::Print() << "ABL Driver Type: " << std::endl;
+
428  if (abl_driver_type == ABLDriverType::None) {
+
429  amrex::Print() << " None" << std::endl;
+
430  } else if (abl_driver_type == ABLDriverType::PressureGradient) {
+
431  amrex::Print() << " Pressure Gradient "
+
432  << amrex::RealVect(abl_pressure_grad[0],abl_pressure_grad[1],abl_pressure_grad[2])
+
433  << std::endl;
+
434  } else if (abl_driver_type == ABLDriverType::GeostrophicWind) {
+
435  amrex::Print() << " Geostrophic Wind "
+
436  << amrex::RealVect(abl_geo_forcing[0],abl_geo_forcing[1],abl_geo_forcing[2])
+
437  << std::endl;
+
438  }
+
439 
+
440  if (max_level > 0) {
+
441  amrex::Print() << "Coupling Type: " << std::endl;
+
442  if (coupling_type == CouplingType::TwoWay) {
+
443  amrex::Print() << " Two-way" << std::endl;
+
444  } else if (coupling_type == CouplingType::OneWay) {
+
445  amrex::Print() << " One-way" << std::endl;
+
446  }
+
447  }
+
448 
+
449  amrex::Print() << "Buoyancy_type : " << buoyancy_type << std::endl;
+
450 
+
451  advChoice.display();
+
452  diffChoice.display();
+
453  spongeChoice.display();
+
454 
+
455  for (int lev = 0; lev <= max_level; lev++) {
+
456  turbChoice[lev].display(lev);
+
457  }
+
458  }
+
459 
+
460  void build_coriolis_forcings()
+
461  {
+
462  amrex::ParmParse pp(pp_prefix);
+
463 
+
464  // Read the rotational time period (in seconds)
+
465  amrex::Real rot_time_period = 86400.0;
+
466  pp.query("rotational_time_period", rot_time_period);
+
467 
+
468  coriolis_factor = 2.0 * 2.0 * PI / rot_time_period;
+
469  amrex::Print() << "Coriolis factor = " << coriolis_factor << std::endl;
+
470 
+
471  amrex::Real latitude = 90.0;
+
472  pp.query("latitude", latitude);
+
473 
+
474  pp.query("coriolis_3d", coriolis_3d);
+
475 
+
476  // Convert to radians
+
477  latitude *= (PI/180.);
+
478  sinphi = std::sin(latitude);
+
479  if (coriolis_3d) {
+
480  cosphi = std::cos(latitude);
+
481  }
+
482 
+
483  amrex::Print() << "Coriolis frequency, f = " << coriolis_factor * sinphi << " 1/s" << std::endl;
+
484 
+
485  if (abl_driver_type == ABLDriverType::GeostrophicWind) {
+
486  // Read in the geostrophic wind -- we only use this to construct
+
487  // the forcing term so no need to keep it
+
488  amrex::Vector<amrex::Real> abl_geo_wind(3);
+
489  pp.queryarr("abl_geo_wind",abl_geo_wind);
+
490 
+
491  if(!pp.query("abl_geo_wind_table",abl_geo_wind_table)) {
+
492  abl_geo_forcing = {
+
493  -coriolis_factor * (abl_geo_wind[1]*sinphi - abl_geo_wind[2]*cosphi),
+
494  coriolis_factor * abl_geo_wind[0]*sinphi,
+
495  -coriolis_factor * abl_geo_wind[0]*cosphi
+
496  };
+
497  } else {
+
498  amrex::Print() << "NOTE: abl_geo_wind_table provided, ignoring input abl_geo_wind" << std::endl;
+
499  }
+
500  }
+
501  }
+
502 
+
503  void read_int_string (int max_level, const char* string_to_read,
+
504  amrex::Vector<int>& vec_to_fill, int default_int)
+
505  {
+
506  amrex::ParmParse pp("erf");
+
507  int nvals = pp.countval(string_to_read);
+
508  AMREX_ALWAYS_ASSERT(nvals == 0 || nvals == 1 || nvals >= max_level+1);
+
509  amrex::Vector<int> temp; temp.resize(nvals);
+
510  pp.queryarr(string_to_read,temp);
+
511  if (nvals == 0) {
+
512  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(default_int);
+
513  } else if (nvals == 1) {
+
514  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(temp[0]);
+
515  } else {
+
516  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(temp[i]);
+
517  }
+
518  }
+
519 
+
520  inline static
+
521  bool terrain_is_flat = false;
+
522 
+
523  inline static
+
524  TerrainType terrain_type = TerrainType::None;
+
525 
+
526  static
+
527  void set_flat_terrain_flag ()
+
528  {
+
529  terrain_is_flat = true;
+
530  }
+
531 
+
532  AdvChoice advChoice;
+
533  DiffChoice diffChoice;
+
534  SpongeChoice spongeChoice;
+
535  amrex::Vector<TurbChoice> turbChoice;
+
536 
+
537  // Default prefix
+
538  std::string pp_prefix {"erf"};
+
539 
+
540  int force_stage1_single_substep = 1;
+
541 
+
542  amrex::Vector<SubsteppingType> substepping_type;
+
543  amrex::Vector<int> anelastic;
+
544 
+
545  int constant_density = 0;
+
546  int ncorr = 1;
+
547  amrex::Real poisson_abstol = 1e-10;
+
548  amrex::Real poisson_reltol = 1e-10;
+
549 
+
550  bool test_mapfactor = false;
+
551 
+
552  int buoyancy_type = 1; // uses rhoprime directly
+
553 
+
554  // Specify what additional physics/forcing modules we use
+
555  bool use_gravity = false;
+
556  bool use_coriolis = false;
+
557  bool coriolis_3d = true;
+
558 
+
559  bool rayleigh_damp_U = false;
+
560  bool rayleigh_damp_V = false;
+
561  bool rayleigh_damp_W = false;
+
562  bool rayleigh_damp_T = false;
+
563  amrex::Real rayleigh_dampcoef = 0.2; // inverse time scale [1/s]
+
564  amrex::Real rayleigh_zdamp = 500.0; // damping layer depth [m]
+
565  amrex::Real rayleigh_ztop;
+
566 
+
567  // This defaults to true but can be set to false for moving terrain cases only
+
568  bool use_lagged_delta_rt = true;
+
569 
+
570  // Constants
+
571  amrex::Real gravity;
+
572  amrex::Real c_p = Cp_d; // specific heat at constant pressure for dry air [J/(kg-K)]
+
573  amrex::Real rdOcp;
+
574 
+
575  // Staggered z levels for vertical grid stretching
+
576  amrex::Real grid_stretching_ratio = 0;
+
577  amrex::Real zsurf = 0.0;
+
578  amrex::Real dz0;
+
579 
+
580  bool project_initial_velocity = false;
+
581 
+
582  // Coriolis forcing
+
583  amrex::Real coriolis_factor = 0.0;
+
584  amrex::Real cosphi = 0.0;
+
585  amrex::Real sinphi = 0.0;
+
586 
+
587  // User-specified forcings in problem definition
+
588  bool custom_rhotheta_forcing = false;
+
589  bool custom_moisture_forcing = false;
+
590  bool custom_w_subsidence = false;
+
591  bool custom_geostrophic_profile = false;
+
592  bool custom_forcing_prim_vars = false;
+
593 
+
594  // Do we use source terms to nudge the solution towards
+
595  // the time-varying data provided in input sounding files?
+
596  bool nudging_from_input_sounding = false;
+
597 
+
598  // User specified MOST BC type
+
599  bool use_explicit_most = false;
+
600 
+
601  // MOST stress rotations
+
602  bool use_rotate_most = false;
+
603 
+
604  // User wishes to output time averaged velocity fields
+
605  bool time_avg_vel = false;
+
606 
+
607  // Type of perturbation
+
608  PerturbationType pert_type;
+
609 
+
610  // Numerical diffusion
+
611  bool use_NumDiff{false};
+
612  amrex::Real NumDiffCoeff{0.};
+
613 
+
614  // Monotonic advection limiter
+
615  bool use_mono_adv{false};
+
616 
+
617  CouplingType coupling_type;
+
618  MoistureType moisture_type;
+
619  WindFarmType windfarm_type;
+
620  WindFarmLocType windfarm_loc_type;
+
621  LandSurfaceType lsm_type;
+
622 
+
623  ABLDriverType abl_driver_type;
+
624  amrex::GpuArray<amrex::Real, AMREX_SPACEDIM> abl_pressure_grad;
+
625  amrex::GpuArray<amrex::Real, AMREX_SPACEDIM> abl_geo_forcing;
+
626  std::string abl_geo_wind_table;
+
627  bool have_geo_wind_profile {false};
+
628 
+
629  int ave_plane {2};
+
630  // Microphysics params
+
631  bool do_cloud {true};
+
632  bool do_precip {true};
+
633  bool use_moist_background {false};
+
634  int RhoQv_comp {-1};
+
635 
+
636  // This component will be model-dependent:
+
637  // if a model with no rain, this will stay -1
+
638  // if Kessler, then it will be set to RhoQ3
+
639  // if SAM, then it will be set to RhoQ4
+
640  int RhoQr_comp {-1};
+
641 
+
642  std::string windfarm_loc_table, windfarm_spec_table, windfarm_spec_table_extra;
+
643  std::string windfarm_blade_table, windfarm_airfoil_tables;
+
644  amrex::Real sampling_distance_by_D = -1.0;
+
645  amrex::Real turb_disk_angle = -1.0;
+
646  amrex::Real windfarm_x_shift = -1.0;
+
647  amrex::Real windfarm_y_shift = -1.0;
+
648 
+
649  // Flag for valid canopy model
+
650  bool do_forest {false};
+
651 };
+
652 #endif
ERF_AdvStruct.H
ERF_Constants.H
Cp_d
constexpr amrex::Real Cp_d
Definition: ERF_Constants.H:12
@@ -783,88 +784,88 @@
DiffChoice::init_params
void init_params()
Definition: ERF_DiffStruct.H:21
DiffChoice::display
void display()
Definition: ERF_DiffStruct.H:56
SolverChoice
Definition: ERF_DataStruct.H:78
-
SolverChoice::rayleigh_damp_T
bool rayleigh_damp_T
Definition: ERF_DataStruct.H:561
-
SolverChoice::dz0
amrex::Real dz0
Definition: ERF_DataStruct.H:577
-
SolverChoice::use_lagged_delta_rt
bool use_lagged_delta_rt
Definition: ERF_DataStruct.H:567
-
SolverChoice::coriolis_factor
amrex::Real coriolis_factor
Definition: ERF_DataStruct.H:582
-
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:598
-
SolverChoice::windfarm_x_shift
amrex::Real windfarm_x_shift
Definition: ERF_DataStruct.H:645
-
SolverChoice::rayleigh_damp_V
bool rayleigh_damp_V
Definition: ERF_DataStruct.H:559
-
SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:639
-
SolverChoice::poisson_reltol
amrex::Real poisson_reltol
Definition: ERF_DataStruct.H:547
-
SolverChoice::rayleigh_zdamp
amrex::Real rayleigh_zdamp
Definition: ERF_DataStruct.H:563
-
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:572
-
SolverChoice::read_int_string
void read_int_string(int max_level, const char *string_to_read, amrex::Vector< int > &vec_to_fill, int default_int)
Definition: ERF_DataStruct.H:502
-
SolverChoice::windfarm_spec_table
std::string windfarm_spec_table
Definition: ERF_DataStruct.H:641
-
SolverChoice::use_mono_adv
bool use_mono_adv
Definition: ERF_DataStruct.H:614
-
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:532
-
SolverChoice::set_flat_terrain_flag
static void set_flat_terrain_flag()
Definition: ERF_DataStruct.H:526
-
SolverChoice::use_gravity
bool use_gravity
Definition: ERF_DataStruct.H:554
-
SolverChoice::build_coriolis_forcings
void build_coriolis_forcings()
Definition: ERF_DataStruct.H:459
-
SolverChoice::ncorr
int ncorr
Definition: ERF_DataStruct.H:545
-
SolverChoice::force_stage1_single_substep
int force_stage1_single_substep
Definition: ERF_DataStruct.H:539
-
SolverChoice::windfarm_spec_table_extra
std::string windfarm_spec_table_extra
Definition: ERF_DataStruct.H:641
-
SolverChoice::cosphi
amrex::Real cosphi
Definition: ERF_DataStruct.H:583
-
SolverChoice::lsm_type
LandSurfaceType lsm_type
Definition: ERF_DataStruct.H:620
-
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:571
-
SolverChoice::windfarm_loc_table
std::string windfarm_loc_table
Definition: ERF_DataStruct.H:641
-
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:570
-
SolverChoice::pp_prefix
std::string pp_prefix
Definition: ERF_DataStruct.H:537
-
SolverChoice::check_params
void check_params(int max_level)
Definition: ERF_DataStruct.H:357
-
SolverChoice::custom_rhotheta_forcing
bool custom_rhotheta_forcing
Definition: ERF_DataStruct.H:587
-
SolverChoice::abl_geo_forcing
amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_geo_forcing
Definition: ERF_DataStruct.H:624
-
SolverChoice::windfarm_loc_type
WindFarmLocType windfarm_loc_type
Definition: ERF_DataStruct.H:619
-
SolverChoice::custom_w_subsidence
bool custom_w_subsidence
Definition: ERF_DataStruct.H:589
-
SolverChoice::nudging_from_input_sounding
bool nudging_from_input_sounding
Definition: ERF_DataStruct.H:595
-
SolverChoice::rayleigh_damp_U
bool rayleigh_damp_U
Definition: ERF_DataStruct.H:558
-
SolverChoice::custom_geostrophic_profile
bool custom_geostrophic_profile
Definition: ERF_DataStruct.H:590
-
SolverChoice::rayleigh_ztop
amrex::Real rayleigh_ztop
Definition: ERF_DataStruct.H:564
-
SolverChoice::grid_stretching_ratio
amrex::Real grid_stretching_ratio
Definition: ERF_DataStruct.H:575
-
SolverChoice::sinphi
amrex::Real sinphi
Definition: ERF_DataStruct.H:584
-
SolverChoice::have_geo_wind_profile
bool have_geo_wind_profile
Definition: ERF_DataStruct.H:626
-
SolverChoice::do_forest
bool do_forest
Definition: ERF_DataStruct.H:649
-
SolverChoice::abl_pressure_grad
amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_pressure_grad
Definition: ERF_DataStruct.H:623
-
SolverChoice::NumDiffCoeff
amrex::Real NumDiffCoeff
Definition: ERF_DataStruct.H:611
-
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:631
-
SolverChoice::substepping_type
amrex::Vector< SubsteppingType > substepping_type
Definition: ERF_DataStruct.H:541
-
SolverChoice::coriolis_3d
bool coriolis_3d
Definition: ERF_DataStruct.H:556
+
SolverChoice::rayleigh_damp_T
bool rayleigh_damp_T
Definition: ERF_DataStruct.H:562
+
SolverChoice::dz0
amrex::Real dz0
Definition: ERF_DataStruct.H:578
+
SolverChoice::use_lagged_delta_rt
bool use_lagged_delta_rt
Definition: ERF_DataStruct.H:568
+
SolverChoice::coriolis_factor
amrex::Real coriolis_factor
Definition: ERF_DataStruct.H:583
+
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:599
+
SolverChoice::windfarm_x_shift
amrex::Real windfarm_x_shift
Definition: ERF_DataStruct.H:646
+
SolverChoice::rayleigh_damp_V
bool rayleigh_damp_V
Definition: ERF_DataStruct.H:560
+
SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:640
+
SolverChoice::poisson_reltol
amrex::Real poisson_reltol
Definition: ERF_DataStruct.H:548
+
SolverChoice::rayleigh_zdamp
amrex::Real rayleigh_zdamp
Definition: ERF_DataStruct.H:564
+
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:573
+
SolverChoice::read_int_string
void read_int_string(int max_level, const char *string_to_read, amrex::Vector< int > &vec_to_fill, int default_int)
Definition: ERF_DataStruct.H:503
+
SolverChoice::windfarm_spec_table
std::string windfarm_spec_table
Definition: ERF_DataStruct.H:642
+
SolverChoice::use_mono_adv
bool use_mono_adv
Definition: ERF_DataStruct.H:615
+
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:533
+
SolverChoice::set_flat_terrain_flag
static void set_flat_terrain_flag()
Definition: ERF_DataStruct.H:527
+
SolverChoice::use_gravity
bool use_gravity
Definition: ERF_DataStruct.H:555
+
SolverChoice::build_coriolis_forcings
void build_coriolis_forcings()
Definition: ERF_DataStruct.H:460
+
SolverChoice::ncorr
int ncorr
Definition: ERF_DataStruct.H:546
+
SolverChoice::force_stage1_single_substep
int force_stage1_single_substep
Definition: ERF_DataStruct.H:540
+
SolverChoice::windfarm_spec_table_extra
std::string windfarm_spec_table_extra
Definition: ERF_DataStruct.H:642
+
SolverChoice::cosphi
amrex::Real cosphi
Definition: ERF_DataStruct.H:584
+
SolverChoice::lsm_type
LandSurfaceType lsm_type
Definition: ERF_DataStruct.H:621
+
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:572
+
SolverChoice::windfarm_loc_table
std::string windfarm_loc_table
Definition: ERF_DataStruct.H:642
+
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:571
+
SolverChoice::pp_prefix
std::string pp_prefix
Definition: ERF_DataStruct.H:538
+
SolverChoice::check_params
void check_params(int max_level)
Definition: ERF_DataStruct.H:358
+
SolverChoice::custom_rhotheta_forcing
bool custom_rhotheta_forcing
Definition: ERF_DataStruct.H:588
+
SolverChoice::abl_geo_forcing
amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_geo_forcing
Definition: ERF_DataStruct.H:625
+
SolverChoice::windfarm_loc_type
WindFarmLocType windfarm_loc_type
Definition: ERF_DataStruct.H:620
+
SolverChoice::custom_w_subsidence
bool custom_w_subsidence
Definition: ERF_DataStruct.H:590
+
SolverChoice::nudging_from_input_sounding
bool nudging_from_input_sounding
Definition: ERF_DataStruct.H:596
+
SolverChoice::rayleigh_damp_U
bool rayleigh_damp_U
Definition: ERF_DataStruct.H:559
+
SolverChoice::custom_geostrophic_profile
bool custom_geostrophic_profile
Definition: ERF_DataStruct.H:591
+
SolverChoice::rayleigh_ztop
amrex::Real rayleigh_ztop
Definition: ERF_DataStruct.H:565
+
SolverChoice::grid_stretching_ratio
amrex::Real grid_stretching_ratio
Definition: ERF_DataStruct.H:576
+
SolverChoice::sinphi
amrex::Real sinphi
Definition: ERF_DataStruct.H:585
+
SolverChoice::have_geo_wind_profile
bool have_geo_wind_profile
Definition: ERF_DataStruct.H:627
+
SolverChoice::do_forest
bool do_forest
Definition: ERF_DataStruct.H:650
+
SolverChoice::abl_pressure_grad
amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_pressure_grad
Definition: ERF_DataStruct.H:624
+
SolverChoice::NumDiffCoeff
amrex::Real NumDiffCoeff
Definition: ERF_DataStruct.H:612
+
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:632
+
SolverChoice::substepping_type
amrex::Vector< SubsteppingType > substepping_type
Definition: ERF_DataStruct.H:542
+
SolverChoice::coriolis_3d
bool coriolis_3d
Definition: ERF_DataStruct.H:557
SolverChoice::init_params
void init_params(int max_level)
Definition: ERF_DataStruct.H:80
-
SolverChoice::sampling_distance_by_D
amrex::Real sampling_distance_by_D
Definition: ERF_DataStruct.H:643
-
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:633
-
SolverChoice::test_mapfactor
bool test_mapfactor
Definition: ERF_DataStruct.H:549
-
SolverChoice::display
void display(int max_level)
Definition: ERF_DataStruct.H:400
-
SolverChoice::use_coriolis
bool use_coriolis
Definition: ERF_DataStruct.H:555
-
SolverChoice::use_NumDiff
bool use_NumDiff
Definition: ERF_DataStruct.H:610
-
SolverChoice::custom_moisture_forcing
bool custom_moisture_forcing
Definition: ERF_DataStruct.H:588
-
SolverChoice::windfarm_blade_table
std::string windfarm_blade_table
Definition: ERF_DataStruct.H:642
-
SolverChoice::zsurf
amrex::Real zsurf
Definition: ERF_DataStruct.H:576
-
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:534
-
SolverChoice::project_initial_velocity
bool project_initial_velocity
Definition: ERF_DataStruct.H:579
-
SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:542
-
SolverChoice::constant_density
int constant_density
Definition: ERF_DataStruct.H:544
-
SolverChoice::advChoice
AdvChoice advChoice
Definition: ERF_DataStruct.H:531
-
SolverChoice::use_moist_background
bool use_moist_background
Definition: ERF_DataStruct.H:632
-
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
-
SolverChoice::custom_forcing_prim_vars
bool custom_forcing_prim_vars
Definition: ERF_DataStruct.H:591
-
SolverChoice::abl_geo_wind_table
std::string abl_geo_wind_table
Definition: ERF_DataStruct.H:625
-
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:523
-
SolverChoice::abl_driver_type
ABLDriverType abl_driver_type
Definition: ERF_DataStruct.H:622
-
SolverChoice::rayleigh_damp_W
bool rayleigh_damp_W
Definition: ERF_DataStruct.H:560
-
SolverChoice::pert_type
PerturbationType pert_type
Definition: ERF_DataStruct.H:607
-
SolverChoice::spongeChoice
SpongeChoice spongeChoice
Definition: ERF_DataStruct.H:533
-
SolverChoice::windfarm_type
WindFarmType windfarm_type
Definition: ERF_DataStruct.H:618
-
SolverChoice::buoyancy_type
int buoyancy_type
Definition: ERF_DataStruct.H:551
-
SolverChoice::poisson_abstol
amrex::Real poisson_abstol
Definition: ERF_DataStruct.H:546
-
SolverChoice::turb_disk_angle
amrex::Real turb_disk_angle
Definition: ERF_DataStruct.H:644
-
SolverChoice::windfarm_y_shift
amrex::Real windfarm_y_shift
Definition: ERF_DataStruct.H:646
-
SolverChoice::terrain_is_flat
static bool terrain_is_flat
Definition: ERF_DataStruct.H:520
-
SolverChoice::time_avg_vel
bool time_avg_vel
Definition: ERF_DataStruct.H:604
-
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:630
-
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:601
-
SolverChoice::rayleigh_dampcoef
amrex::Real rayleigh_dampcoef
Definition: ERF_DataStruct.H:562
-
SolverChoice::coupling_type
CouplingType coupling_type
Definition: ERF_DataStruct.H:616
-
SolverChoice::windfarm_airfoil_tables
std::string windfarm_airfoil_tables
Definition: ERF_DataStruct.H:642
-
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:628
+
SolverChoice::sampling_distance_by_D
amrex::Real sampling_distance_by_D
Definition: ERF_DataStruct.H:644
+
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:634
+
SolverChoice::test_mapfactor
bool test_mapfactor
Definition: ERF_DataStruct.H:550
+
SolverChoice::display
void display(int max_level)
Definition: ERF_DataStruct.H:401
+
SolverChoice::use_coriolis
bool use_coriolis
Definition: ERF_DataStruct.H:556
+
SolverChoice::use_NumDiff
bool use_NumDiff
Definition: ERF_DataStruct.H:611
+
SolverChoice::custom_moisture_forcing
bool custom_moisture_forcing
Definition: ERF_DataStruct.H:589
+
SolverChoice::windfarm_blade_table
std::string windfarm_blade_table
Definition: ERF_DataStruct.H:643
+
SolverChoice::zsurf
amrex::Real zsurf
Definition: ERF_DataStruct.H:577
+
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:535
+
SolverChoice::project_initial_velocity
bool project_initial_velocity
Definition: ERF_DataStruct.H:580
+
SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:543
+
SolverChoice::constant_density
int constant_density
Definition: ERF_DataStruct.H:545
+
SolverChoice::advChoice
AdvChoice advChoice
Definition: ERF_DataStruct.H:532
+
SolverChoice::use_moist_background
bool use_moist_background
Definition: ERF_DataStruct.H:633
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618
+
SolverChoice::custom_forcing_prim_vars
bool custom_forcing_prim_vars
Definition: ERF_DataStruct.H:592
+
SolverChoice::abl_geo_wind_table
std::string abl_geo_wind_table
Definition: ERF_DataStruct.H:626
+
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:524
+
SolverChoice::abl_driver_type
ABLDriverType abl_driver_type
Definition: ERF_DataStruct.H:623
+
SolverChoice::rayleigh_damp_W
bool rayleigh_damp_W
Definition: ERF_DataStruct.H:561
+
SolverChoice::pert_type
PerturbationType pert_type
Definition: ERF_DataStruct.H:608
+
SolverChoice::spongeChoice
SpongeChoice spongeChoice
Definition: ERF_DataStruct.H:534
+
SolverChoice::windfarm_type
WindFarmType windfarm_type
Definition: ERF_DataStruct.H:619
+
SolverChoice::buoyancy_type
int buoyancy_type
Definition: ERF_DataStruct.H:552
+
SolverChoice::poisson_abstol
amrex::Real poisson_abstol
Definition: ERF_DataStruct.H:547
+
SolverChoice::turb_disk_angle
amrex::Real turb_disk_angle
Definition: ERF_DataStruct.H:645
+
SolverChoice::windfarm_y_shift
amrex::Real windfarm_y_shift
Definition: ERF_DataStruct.H:647
+
SolverChoice::terrain_is_flat
static bool terrain_is_flat
Definition: ERF_DataStruct.H:521
+
SolverChoice::time_avg_vel
bool time_avg_vel
Definition: ERF_DataStruct.H:605
+
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:631
+
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:602
+
SolverChoice::rayleigh_dampcoef
amrex::Real rayleigh_dampcoef
Definition: ERF_DataStruct.H:563
+
SolverChoice::coupling_type
CouplingType coupling_type
Definition: ERF_DataStruct.H:617
+
SolverChoice::windfarm_airfoil_tables
std::string windfarm_airfoil_tables
Definition: ERF_DataStruct.H:643
+
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:629
SpongeChoice
Definition: ERF_SpongeStruct.H:15
SpongeChoice::display
void display()
Definition: ERF_SpongeStruct.H:45
SpongeChoice::init_params
void init_params()
Definition: ERF_SpongeStruct.H:17
diff --git a/ERF__DiffusionSrcForState__N_8cpp.html b/ERF__DiffusionSrcForState__N_8cpp.html index 2b1bf47eb8..f2e59c8b62 100644 --- a/ERF__DiffusionSrcForState__N_8cpp.html +++ b/ERF__DiffusionSrcForState__N_8cpp.html @@ -1078,10 +1078,10 @@

DiffChoice::alpha_C
amrex::Real alpha_C
Definition: ERF_DiffStruct.H:80
DiffChoice::molec_diff_type
MolecDiffType molec_diff_type
Definition: ERF_DiffStruct.H:76
MYNNLevel25::B1
amrex::Real B1
Definition: ERF_MYNNStruct.H:43
-
SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:639
-
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:532
-
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:633
-
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:534
+
SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:640
+
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:533
+
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:634
+
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:535
TurbChoice
Definition: ERF_TurbStruct.H:29
TurbChoice::pbl_mynn
MYNNLevel25 pbl_mynn
Definition: ERF_TurbStruct.H:194
TurbChoice::pbl_type
PBLType pbl_type
Definition: ERF_TurbStruct.H:192
diff --git a/ERF__DiffusionSrcForState__T_8cpp.html b/ERF__DiffusionSrcForState__T_8cpp.html index a40727d9ad..d0dac52b3b 100644 --- a/ERF__DiffusionSrcForState__T_8cpp.html +++ b/ERF__DiffusionSrcForState__T_8cpp.html @@ -1246,10 +1246,10 @@

DiffChoice::alpha_C
amrex::Real alpha_C
Definition: ERF_DiffStruct.H:80
DiffChoice::molec_diff_type
MolecDiffType molec_diff_type
Definition: ERF_DiffStruct.H:76
MYNNLevel25::B1
amrex::Real B1
Definition: ERF_MYNNStruct.H:43
-
SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:639
-
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:532
-
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:633
-
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:534
+
SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:640
+
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:533
+
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:634
+
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:535
TurbChoice
Definition: ERF_TurbStruct.H:29
TurbChoice::pbl_mynn
MYNNLevel25 pbl_mynn
Definition: ERF_TurbStruct.H:194
TurbChoice::pbl_type
PBLType pbl_type
Definition: ERF_TurbStruct.H:192
diff --git a/ERF__EOS_8H.html b/ERF__EOS_8H.html index 388530b911..1770a3e66f 100644 --- a/ERF__EOS_8H.html +++ b/ERF__EOS_8H.html @@ -637,7 +637,7 @@

34  return th / std::pow(p_0/P, rdOcp);
35 }
-

Referenced by buoyancy_dry_anelastic_T(), buoyancy_dry_default(), and buoyancy_dry_Tpert().

+

Referenced by buoyancy_dry_anelastic_T(), buoyancy_dry_Tpert(), and buoyancy_moist_Tpert().

Here is the caller graph for this function:
@@ -645,10 +645,10 @@

- - - - + + + +

@@ -697,29 +697,27 @@

54  return p_loc / (R_d * rho * (1.0 + R_v/R_d*qv) );
55 }
-

Referenced by buoyancy_dry_default(), buoyancy_dry_Tpert(), buoyancy_type2(), buoyancy_type3(), SAM::Compute_Coefficients(), Kessler::Copy_State_to_Micro(), SAM::Copy_State_to_Micro(), derived::erf_dermoisttemp(), derived::erf_dertemp(), Radiation::initialize(), and ERF::WritePlotFile().

+

Referenced by buoyancy_dry_Tpert(), buoyancy_moist_Tpert(), SAM::Compute_Coefficients(), Kessler::Copy_State_to_Micro(), SAM::Copy_State_to_Micro(), derived::erf_dermoisttemp(), derived::erf_dertemp(), Radiation::initialize(), and ERF::WritePlotFile().

Here is the caller graph for this function:
- - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + +
diff --git a/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.map b/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.map index 7e436be8af..a1df84044e 100644 --- a/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.map +++ b/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.map @@ -1,19 +1,17 @@ - - - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + diff --git a/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.md5 b/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.md5 index 41edf10daa..d44905dee1 100644 --- a/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.md5 +++ b/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.md5 @@ -1 +1 @@ -de5b3d3f49721d49a959b58eed3df374 \ No newline at end of file +ffdb3b252f63e15f5bb4359375d58642 \ No newline at end of file diff --git a/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.png b/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.png index 4576440999..d8691aa19a 100644 Binary files a/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.png and b/ERF__EOS_8H_a65cf1718b7a1fcc56cb16685642543da_icgraph.png differ diff --git a/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.map b/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.map index 29cdf71eaf..6c7f53fa0a 100644 --- a/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.map +++ b/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.map @@ -1,8 +1,8 @@ - - - - + + + + diff --git a/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.md5 b/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.md5 index 144aaf418e..9145ded408 100644 --- a/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.md5 +++ b/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.md5 @@ -1 +1 @@ -3851852540e807b88ba22351d6ceb14d \ No newline at end of file +24cbc27a00b9c0a864acd7e4ac5cfe67 \ No newline at end of file diff --git a/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.png b/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.png index 535f498442..5ae598e466 100644 Binary files a/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.png and b/ERF__EOS_8H_ae76d3ce3486d0e450849c56159f2dbd4_icgraph.png differ diff --git a/ERF__Kessler_8H_source.html b/ERF__Kessler_8H_source.html index 0708e7051d..124e43a5c4 100644 --- a/ERF__Kessler_8H_source.html +++ b/ERF__Kessler_8H_source.html @@ -327,11 +327,11 @@
MicVar_Kess::NumVars
@ NumVars
Definition: ERF_Kessler.H:42
MicVar_Kess::qv
@ qv
Definition: ERF_Kessler.H:36
SolverChoice
Definition: ERF_DataStruct.H:78
-
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:571
-
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:631
-
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
-
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:630
-
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:628
+
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:572
+
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:632
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618
+
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:631
+
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:629
diff --git a/ERF__SAM_8H_source.html b/ERF__SAM_8H_source.html index 8c6cb22540..0869fe3bcd 100644 --- a/ERF__SAM_8H_source.html +++ b/ERF__SAM_8H_source.html @@ -536,12 +536,12 @@
MicVar::qps
@ qps
Definition: ERF_SAM.H:43
MicVar::qp
@ qp
Definition: ERF_SAM.H:41
SolverChoice
Definition: ERF_DataStruct.H:78
-
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:572
-
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:571
-
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:631
-
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
-
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:630
-
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:628
+
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:573
+
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:572
+
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:632
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618
+
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:631
+
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:629
diff --git a/ERF__TI__slow__rhs__fun_8H_source.html b/ERF__TI__slow__rhs__fun_8H_source.html index cf374cdb16..b4593afacd 100644 --- a/ERF__TI__slow__rhs__fun_8H_source.html +++ b/ERF__TI__slow__rhs__fun_8H_source.html @@ -103,478 +103,480 @@
15  //
16  // Define primitive variables for all later RK stages
17  // (We have already done this for the first RK step)
-
18  //
-
19  if (nrk > 0) {
-
20  int ng_cons = S_data[IntVars::cons].nGrow();
-
21  cons_to_prim(S_data[IntVars::cons], ng_cons);
-
22  }
-
23 
-
24  BL_PROFILE("slow_rhs_fun_pre");
-
25  if (verbose) Print() << "Making slow rhs at time " << old_stage_time << " for fast variables advancing from " <<
-
26  old_step_time << " to " << new_stage_time << std::endl;
-
27 
-
28  Real slow_dt = new_stage_time - old_step_time;
+
18  // Note that it is essential this happen before the call to make_mom_sources
+
19  // because some of the buoyancy routines use the primitive variables
+
20  //
+
21  if (nrk > 0) {
+
22  int ng_cons = S_data[IntVars::cons].nGrow();
+
23  cons_to_prim(S_data[IntVars::cons], ng_cons);
+
24  }
+
25 
+
26  BL_PROFILE("slow_rhs_fun_pre");
+
27  if (verbose) Print() << "Making slow rhs at time " << old_stage_time << " for fast variables advancing from " <<
+
28  old_step_time << " to " << new_stage_time << std::endl;
29 
-
30  int n_qstate = micro->Get_Qstate_Size();
+
30  Real slow_dt = new_stage_time - old_step_time;
31 
-
32  // *************************************************************************
-
33  // Set up flux registers if using two_way coupling
+
32  int n_qstate = micro->Get_Qstate_Size();
+
33 
34  // *************************************************************************
-
35  YAFluxRegister* fr_as_crse = nullptr;
-
36  YAFluxRegister* fr_as_fine = nullptr;
-
37  if (solverChoice.coupling_type == CouplingType::TwoWay) {
-
38  if (level < finest_level) {
-
39  fr_as_crse = getAdvFluxReg(level+1);
-
40  fr_as_crse->reset();
-
41  }
-
42  if (level > 0) {
-
43  fr_as_fine = getAdvFluxReg(level);
-
44  }
-
45  }
-
46 
-
47  Real* dptr_u_geos = solverChoice.have_geo_wind_profile ? d_u_geos[level].data(): nullptr;
-
48  Real* dptr_v_geos = solverChoice.have_geo_wind_profile ? d_v_geos[level].data(): nullptr;
-
49 
-
50  // Construct the source terms for the cell-centered (conserved) variables
-
51  make_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim, cc_src, z_phys_cc[level],
-
52 #if defined(ERF_USE_RRTMGP)
-
53  qheating_rates[level].get(),
-
54 #endif
-
55  fine_geom, solverChoice,
-
56  mapfac_u[level], mapfac_v[level], mapfac_m[level],
-
57  dptr_rhotheta_src, dptr_rhoqt_src,
-
58  dptr_wbar_sub, d_rayleigh_ptrs_at_lev,
-
59  input_sounding_data, turbPert);
-
60 
-
61  // Canopy data for mom sources
-
62  MultiFab* forest_drag = nullptr;
-
63  if (solverChoice.do_forest) { forest_drag = m_forest[level]->get_drag_field(); }
-
64 
-
65  // Moving terrain
-
66  if ( solverChoice.terrain_type == TerrainType::Moving )
-
67  {
-
68  // Note that the "old" and "new" metric terms correspond to
-
69  // t^n and the RK stage (either t^*, t^** or t^{n+1} that this source
-
70  // will be used to advance to
-
71 
-
72  // The "src" metric terms correspond to the time at which we are evaluating the source here,
-
73  // aka old_stage_time
-
74 
-
75  if (verbose) Print() << "Re-making old geometry at old time : " << old_step_time << std::endl;
-
76  prob->init_custom_terrain(fine_geom,*z_phys_nd[level],old_step_time);
-
77  init_terrain_grid (level,fine_geom,*z_phys_nd[level], zlevels_stag[level], phys_bc_type);
-
78  make_J (fine_geom,*z_phys_nd[level], *detJ_cc[level]);
-
79  make_areas (fine_geom,*z_phys_nd[level], *ax[level], *ay[level], *az[level]);
-
80 
-
81  if (verbose) Print() << "Making src geometry at old_stage_time: " << old_stage_time << std::endl;
-
82  prob->init_custom_terrain(fine_geom,*z_phys_nd_src[level],old_stage_time);
-
83  init_terrain_grid (level,fine_geom,*z_phys_nd_src[level], zlevels_stag[level], phys_bc_type);
-
84  make_J (fine_geom,*z_phys_nd_src[level], *detJ_cc_src[level]);
-
85  make_areas (fine_geom,*z_phys_nd_src[level], *ax_src[level], *ay_src[level], *az_src[level]);
-
86 
-
87  if (verbose) Print() << "Making new geometry at new_stage_time: " << new_stage_time << std::endl;
-
88  prob->init_custom_terrain(fine_geom,*z_phys_nd_new[level],new_stage_time);
-
89  init_terrain_grid (level,fine_geom,*z_phys_nd_new[level], zlevels_stag[level], phys_bc_type);
-
90  make_J (fine_geom,*z_phys_nd_new[level], *detJ_cc_new[level]);
-
91  make_areas (fine_geom,*z_phys_nd_new[level], *ax_new[level], *ay_new[level], *az_new[level]);
-
92 
-
93  Real inv_dt = 1./slow_dt;
+
35  // Set up flux registers if using two_way coupling
+
36  // *************************************************************************
+
37  YAFluxRegister* fr_as_crse = nullptr;
+
38  YAFluxRegister* fr_as_fine = nullptr;
+
39  if (solverChoice.coupling_type == CouplingType::TwoWay) {
+
40  if (level < finest_level) {
+
41  fr_as_crse = getAdvFluxReg(level+1);
+
42  fr_as_crse->reset();
+
43  }
+
44  if (level > 0) {
+
45  fr_as_fine = getAdvFluxReg(level);
+
46  }
+
47  }
+
48 
+
49  Real* dptr_u_geos = solverChoice.have_geo_wind_profile ? d_u_geos[level].data(): nullptr;
+
50  Real* dptr_v_geos = solverChoice.have_geo_wind_profile ? d_v_geos[level].data(): nullptr;
+
51 
+
52  // Construct the source terms for the cell-centered (conserved) variables
+
53  make_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim, cc_src, z_phys_cc[level],
+
54 #if defined(ERF_USE_RRTMGP)
+
55  qheating_rates[level].get(),
+
56 #endif
+
57  fine_geom, solverChoice,
+
58  mapfac_u[level], mapfac_v[level], mapfac_m[level],
+
59  dptr_rhotheta_src, dptr_rhoqt_src,
+
60  dptr_wbar_sub, d_rayleigh_ptrs_at_lev,
+
61  input_sounding_data, turbPert);
+
62 
+
63  // Canopy data for mom sources
+
64  MultiFab* forest_drag = nullptr;
+
65  if (solverChoice.do_forest) { forest_drag = m_forest[level]->get_drag_field(); }
+
66 
+
67  // Moving terrain
+
68  if ( solverChoice.terrain_type == TerrainType::Moving )
+
69  {
+
70  // Note that the "old" and "new" metric terms correspond to
+
71  // t^n and the RK stage (either t^*, t^** or t^{n+1} that this source
+
72  // will be used to advance to
+
73 
+
74  // The "src" metric terms correspond to the time at which we are evaluating the source here,
+
75  // aka old_stage_time
+
76 
+
77  if (verbose) Print() << "Re-making old geometry at old time : " << old_step_time << std::endl;
+
78  prob->init_custom_terrain(fine_geom,*z_phys_nd[level],old_step_time);
+
79  init_terrain_grid (level,fine_geom,*z_phys_nd[level], zlevels_stag[level], phys_bc_type);
+
80  make_J (fine_geom,*z_phys_nd[level], *detJ_cc[level]);
+
81  make_areas (fine_geom,*z_phys_nd[level], *ax[level], *ay[level], *az[level]);
+
82 
+
83  if (verbose) Print() << "Making src geometry at old_stage_time: " << old_stage_time << std::endl;
+
84  prob->init_custom_terrain(fine_geom,*z_phys_nd_src[level],old_stage_time);
+
85  init_terrain_grid (level,fine_geom,*z_phys_nd_src[level], zlevels_stag[level], phys_bc_type);
+
86  make_J (fine_geom,*z_phys_nd_src[level], *detJ_cc_src[level]);
+
87  make_areas (fine_geom,*z_phys_nd_src[level], *ax_src[level], *ay_src[level], *az_src[level]);
+
88 
+
89  if (verbose) Print() << "Making new geometry at new_stage_time: " << new_stage_time << std::endl;
+
90  prob->init_custom_terrain(fine_geom,*z_phys_nd_new[level],new_stage_time);
+
91  init_terrain_grid (level,fine_geom,*z_phys_nd_new[level], zlevels_stag[level], phys_bc_type);
+
92  make_J (fine_geom,*z_phys_nd_new[level], *detJ_cc_new[level]);
+
93  make_areas (fine_geom,*z_phys_nd_new[level], *ax_new[level], *ay_new[level], *az_new[level]);
94 
-
95 #ifdef _OPENMP
-
96 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
-
97 #endif
-
98  for (MFIter mfi(*z_t_rk[level],TilingIfNotGPU()); mfi.isValid(); ++mfi)
-
99  {
-
100  Box gbx = mfi.growntilebox(IntVect(1,1,0));
-
101 
-
102  const Array4<Real >& z_t_arr = z_t_rk[level]->array(mfi);
-
103  const Array4<Real const>& z_nd_new_arr = z_phys_nd_new[level]->const_array(mfi);
-
104  const Array4<Real const>& z_nd_old_arr = z_phys_nd[level]->const_array(mfi);
-
105 
-
106  // Loop over horizontal plane
-
107  amrex::ParallelFor(gbx, [=] AMREX_GPU_DEVICE (int i, int j, int k) noexcept
-
108  {
-
109  // Evaluate between RK stages assuming the geometry is linear between old and new time
-
110  z_t_arr(i,j,k) = 0.25 * inv_dt * (z_nd_new_arr(i+1,j+1,k) - z_nd_old_arr(i+1,j+1,k)
-
111  +z_nd_new_arr(i ,j+1,k) - z_nd_old_arr( i,j+1,k)
-
112  +z_nd_new_arr(i+1,j ,k) - z_nd_old_arr(i+1,j ,k)
-
113  +z_nd_new_arr(i ,j ,k) - z_nd_old_arr(i ,j ,k));
-
114  });
-
115 
-
116  } // mfi
+
95  Real inv_dt = 1./slow_dt;
+
96 
+
97 #ifdef _OPENMP
+
98 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
+
99 #endif
+
100  for (MFIter mfi(*z_t_rk[level],TilingIfNotGPU()); mfi.isValid(); ++mfi)
+
101  {
+
102  Box gbx = mfi.growntilebox(IntVect(1,1,0));
+
103 
+
104  const Array4<Real >& z_t_arr = z_t_rk[level]->array(mfi);
+
105  const Array4<Real const>& z_nd_new_arr = z_phys_nd_new[level]->const_array(mfi);
+
106  const Array4<Real const>& z_nd_old_arr = z_phys_nd[level]->const_array(mfi);
+
107 
+
108  // Loop over horizontal plane
+
109  amrex::ParallelFor(gbx, [=] AMREX_GPU_DEVICE (int i, int j, int k) noexcept
+
110  {
+
111  // Evaluate between RK stages assuming the geometry is linear between old and new time
+
112  z_t_arr(i,j,k) = 0.25 * inv_dt * (z_nd_new_arr(i+1,j+1,k) - z_nd_old_arr(i+1,j+1,k)
+
113  +z_nd_new_arr(i ,j+1,k) - z_nd_old_arr( i,j+1,k)
+
114  +z_nd_new_arr(i+1,j ,k) - z_nd_old_arr(i+1,j ,k)
+
115  +z_nd_new_arr(i ,j ,k) - z_nd_old_arr(i ,j ,k));
+
116  });
117 
-
118  MultiFab r_hse_new (base_state_new[level], make_alias, BaseState::r0_comp, 1);
-
119  MultiFab p_hse_new (base_state_new[level], make_alias, BaseState::p0_comp, 1);
-
120  MultiFab pi_hse_new (base_state_new[level], make_alias, BaseState::pi0_comp, 1);
-
121  MultiFab th_hse_new (base_state_new[level], make_alias, BaseState::th0_comp, 1);
-
122 
-
123  MultiFab* r0_new = &r_hse_new;
-
124  MultiFab* p0_new = &p_hse_new;
-
125  MultiFab* pi0_new = &pi_hse_new;
-
126  MultiFab* th0_new = &th_hse_new;
-
127 
-
128  make_mom_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim,
-
129  z_phys_nd[level], z_phys_cc[level],
-
130  xvel_new, yvel_new, zvel_new,
-
131  xmom_src, ymom_src, zmom_src,
-
132  base_state_new[level], forest_drag, fine_geom, solverChoice,
-
133  mapfac_m[level], mapfac_u[level], mapfac_v[level],
-
134  dptr_u_geos, dptr_v_geos, dptr_wbar_sub,
-
135  d_rayleigh_ptrs_at_lev, d_sponge_ptrs_at_lev,
-
136  input_sounding_data, n_qstate);
-
137 
-
138  erf_slow_rhs_pre(level, finest_level, nrk, slow_dt, S_rhs, S_old, S_data, S_prim, S_scratch,
-
139  xvel_new, yvel_new, zvel_new,
-
140  z_t_rk[level], cc_src, xmom_src, ymom_src, zmom_src,
-
141  (level > 0) ? &zmom_crse_rhs[level] : nullptr,
-
142  Tau11_lev[level].get(), Tau22_lev[level].get(), Tau33_lev[level].get(), Tau12_lev[level].get(),
-
143  Tau13_lev[level].get(), Tau21_lev[level].get(), Tau23_lev[level].get(), Tau31_lev[level].get(),
-
144  Tau32_lev[level].get(), SmnSmn, eddyDiffs, Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3, Q2fx3, Diss,
-
145  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
-
146  z_phys_nd_src[level], ax_src[level], ay_src[level], az_src[level], detJ_cc_src[level], p0_new,
-
147  pp_inc[level],
-
148  mapfac_m[level], mapfac_u[level], mapfac_v[level],
-
149 #ifdef ERF_USE_EB
-
150  EBFactory(level),
-
151 #endif
-
152  fr_as_crse, fr_as_fine);
-
153 
-
154  add_thin_body_sources(xmom_src, ymom_src, zmom_src,
-
155  xflux_imask[level], yflux_imask[level], zflux_imask[level],
-
156  thin_xforce[level], thin_yforce[level], thin_zforce[level]);
-
157 
-
158  // We define and evolve (rho theta)_0 in order to re-create p_0 in a way that is consistent
-
159  // with our update of (rho theta) but does NOT maintain dp_0 / dz = -rho_0 g. This is why
-
160  // we no longer discretize the vertical pressure gradient in perturbational form.
-
161  MultiFab rt0(p0->boxArray(),p0->DistributionMap(),1,1);
-
162  MultiFab rt0_new(p0->boxArray(),p0->DistributionMap(),1,1);
-
163  MultiFab r0_temp(p0->boxArray(),p0->DistributionMap(),1,1);
-
164 
-
165  // Remember this does NOT maintain dp_0 / dz = -rho_0 g, so we can no longer
-
166  // discretize the vertical pressure gradient in perturbational form.
-
167  AMREX_ALWAYS_ASSERT(solverChoice.advChoice.dycore_horiz_adv_type == AdvType::Centered_2nd);
-
168  AMREX_ALWAYS_ASSERT(solverChoice.advChoice.dycore_vert_adv_type == AdvType::Centered_2nd);
-
169 
-
170  Real dt_base = (new_stage_time - old_step_time);
+
118  } // mfi
+
119 
+
120  MultiFab r_hse_new (base_state_new[level], make_alias, BaseState::r0_comp, 1);
+
121  MultiFab p_hse_new (base_state_new[level], make_alias, BaseState::p0_comp, 1);
+
122  MultiFab pi_hse_new (base_state_new[level], make_alias, BaseState::pi0_comp, 1);
+
123  MultiFab th_hse_new (base_state_new[level], make_alias, BaseState::th0_comp, 1);
+
124 
+
125  MultiFab* r0_new = &r_hse_new;
+
126  MultiFab* p0_new = &p_hse_new;
+
127  MultiFab* pi0_new = &pi_hse_new;
+
128  MultiFab* th0_new = &th_hse_new;
+
129 
+
130  make_mom_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim,
+
131  z_phys_nd[level], z_phys_cc[level],
+
132  xvel_new, yvel_new, zvel_new,
+
133  xmom_src, ymom_src, zmom_src,
+
134  base_state_new[level], forest_drag, fine_geom, solverChoice,
+
135  mapfac_m[level], mapfac_u[level], mapfac_v[level],
+
136  dptr_u_geos, dptr_v_geos, dptr_wbar_sub,
+
137  d_rayleigh_ptrs_at_lev, d_sponge_ptrs_at_lev,
+
138  input_sounding_data, n_qstate);
+
139 
+
140  erf_slow_rhs_pre(level, finest_level, nrk, slow_dt, S_rhs, S_old, S_data, S_prim, S_scratch,
+
141  xvel_new, yvel_new, zvel_new,
+
142  z_t_rk[level], cc_src, xmom_src, ymom_src, zmom_src,
+
143  (level > 0) ? &zmom_crse_rhs[level] : nullptr,
+
144  Tau11_lev[level].get(), Tau22_lev[level].get(), Tau33_lev[level].get(), Tau12_lev[level].get(),
+
145  Tau13_lev[level].get(), Tau21_lev[level].get(), Tau23_lev[level].get(), Tau31_lev[level].get(),
+
146  Tau32_lev[level].get(), SmnSmn, eddyDiffs, Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3, Q2fx3, Diss,
+
147  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
+
148  z_phys_nd_src[level], ax_src[level], ay_src[level], az_src[level], detJ_cc_src[level], p0_new,
+
149  pp_inc[level],
+
150  mapfac_m[level], mapfac_u[level], mapfac_v[level],
+
151 #ifdef ERF_USE_EB
+
152  EBFactory(level),
+
153 #endif
+
154  fr_as_crse, fr_as_fine);
+
155 
+
156  add_thin_body_sources(xmom_src, ymom_src, zmom_src,
+
157  xflux_imask[level], yflux_imask[level], zflux_imask[level],
+
158  thin_xforce[level], thin_yforce[level], thin_zforce[level]);
+
159 
+
160  // We define and evolve (rho theta)_0 in order to re-create p_0 in a way that is consistent
+
161  // with our update of (rho theta) but does NOT maintain dp_0 / dz = -rho_0 g. This is why
+
162  // we no longer discretize the vertical pressure gradient in perturbational form.
+
163  MultiFab rt0(p0->boxArray(),p0->DistributionMap(),1,1);
+
164  MultiFab rt0_new(p0->boxArray(),p0->DistributionMap(),1,1);
+
165  MultiFab r0_temp(p0->boxArray(),p0->DistributionMap(),1,1);
+
166 
+
167  // Remember this does NOT maintain dp_0 / dz = -rho_0 g, so we can no longer
+
168  // discretize the vertical pressure gradient in perturbational form.
+
169  AMREX_ALWAYS_ASSERT(solverChoice.advChoice.dycore_horiz_adv_type == AdvType::Centered_2nd);
+
170  AMREX_ALWAYS_ASSERT(solverChoice.advChoice.dycore_vert_adv_type == AdvType::Centered_2nd);
171 
-
172  const GpuArray<Real, AMREX_SPACEDIM> dxInv = fine_geom.InvCellSizeArray();
+
172  Real dt_base = (new_stage_time - old_step_time);
173 
-
174  const Real l_rdOcp = solverChoice.rdOcp;
+
174  const GpuArray<Real, AMREX_SPACEDIM> dxInv = fine_geom.InvCellSizeArray();
175 
-
176 #ifdef _OPENMP
-
177 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
-
178 #endif
-
179  for ( MFIter mfi(*p0,TilingIfNotGPU()); mfi.isValid(); ++mfi)
-
180  {
-
181  const Array4<Real > rt0_arr = rt0.array(mfi);
-
182  const Array4<Real > rt0_tmp_arr = rt0_new.array(mfi);
-
183 
-
184  const Array4<Real const> r0_arr = r0->const_array(mfi);
-
185  const Array4<Real > r0_new_arr = r0_new->array(mfi);
-
186  const Array4<Real > r0_tmp_arr = r0_temp.array(mfi);
-
187 
-
188  const Array4<Real const> p0_arr = p0->const_array(mfi);
-
189  const Array4<Real > p0_new_arr = p0_new->array(mfi);
-
190  const Array4<Real > pi0_new_arr = pi0_new->array(mfi);
-
191  const Array4<Real > th0_new_arr = th0_new->array(mfi);
-
192 
-
193  const Array4<Real >& z_t_arr = z_t_rk[level]->array(mfi);
+
176  const Real l_rdOcp = solverChoice.rdOcp;
+
177 
+
178 #ifdef _OPENMP
+
179 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
+
180 #endif
+
181  for ( MFIter mfi(*p0,TilingIfNotGPU()); mfi.isValid(); ++mfi)
+
182  {
+
183  const Array4<Real > rt0_arr = rt0.array(mfi);
+
184  const Array4<Real > rt0_tmp_arr = rt0_new.array(mfi);
+
185 
+
186  const Array4<Real const> r0_arr = r0->const_array(mfi);
+
187  const Array4<Real > r0_new_arr = r0_new->array(mfi);
+
188  const Array4<Real > r0_tmp_arr = r0_temp.array(mfi);
+
189 
+
190  const Array4<Real const> p0_arr = p0->const_array(mfi);
+
191  const Array4<Real > p0_new_arr = p0_new->array(mfi);
+
192  const Array4<Real > pi0_new_arr = pi0_new->array(mfi);
+
193  const Array4<Real > th0_new_arr = th0_new->array(mfi);
194 
-
195  const Array4<Real const>& dJ_old_arr = detJ_cc[level]->const_array(mfi);
-
196  const Array4<Real const>& dJ_new_arr = detJ_cc_new[level]->const_array(mfi);
-
197  const Array4<Real const>& dJ_src_arr = detJ_cc_src[level]->const_array(mfi);
-
198 
-
199  Box gbx = mfi.growntilebox({1,1,1});
-
200  amrex::ParallelFor(gbx, [=] AMREX_GPU_DEVICE (int i, int j, int k) noexcept
-
201  {
-
202  rt0_arr(i,j,k) = getRhoThetagivenP(p0_arr(i,j,k));
-
203  rt0_tmp_arr(i,j,k) = getRhoThetagivenP(p0_new_arr(i,j,k));
-
204  r0_tmp_arr(i,j,k) = r0_new_arr(i,j,k);
-
205  });
-
206 
-
207  Box gbx2 = mfi.growntilebox({1,1,0});
-
208  amrex::ParallelFor(gbx2, [=] AMREX_GPU_DEVICE (int i, int j, int k) noexcept
-
209  {
-
210  Real zflux_r_lo = -z_t_arr(i,j,k ) * 0.5 * (r0_tmp_arr(i,j,k) + r0_tmp_arr(i,j,k-1));
-
211  Real zflux_r_hi = -z_t_arr(i,j,k+1) * 0.5 * (r0_tmp_arr(i,j,k) + r0_tmp_arr(i,j,k+1));
-
212 
-
213  Real zflux_rt_lo = zflux_r_lo * 0.5 * (rt0_tmp_arr(i,j,k)/r0_tmp_arr(i,j,k) + rt0_tmp_arr(i,j,k-1)/r0_tmp_arr(i,j,k-1));
-
214  Real zflux_rt_hi = zflux_r_hi * 0.5 * (rt0_tmp_arr(i,j,k)/r0_tmp_arr(i,j,k) + rt0_tmp_arr(i,j,k+1)/r0_tmp_arr(i,j,k+1));
-
215 
-
216  Real invdetJ = 1.0 / dJ_src_arr(i,j,k);
+
195  const Array4<Real >& z_t_arr = z_t_rk[level]->array(mfi);
+
196 
+
197  const Array4<Real const>& dJ_old_arr = detJ_cc[level]->const_array(mfi);
+
198  const Array4<Real const>& dJ_new_arr = detJ_cc_new[level]->const_array(mfi);
+
199  const Array4<Real const>& dJ_src_arr = detJ_cc_src[level]->const_array(mfi);
+
200 
+
201  Box gbx = mfi.growntilebox({1,1,1});
+
202  amrex::ParallelFor(gbx, [=] AMREX_GPU_DEVICE (int i, int j, int k) noexcept
+
203  {
+
204  rt0_arr(i,j,k) = getRhoThetagivenP(p0_arr(i,j,k));
+
205  rt0_tmp_arr(i,j,k) = getRhoThetagivenP(p0_new_arr(i,j,k));
+
206  r0_tmp_arr(i,j,k) = r0_new_arr(i,j,k);
+
207  });
+
208 
+
209  Box gbx2 = mfi.growntilebox({1,1,0});
+
210  amrex::ParallelFor(gbx2, [=] AMREX_GPU_DEVICE (int i, int j, int k) noexcept
+
211  {
+
212  Real zflux_r_lo = -z_t_arr(i,j,k ) * 0.5 * (r0_tmp_arr(i,j,k) + r0_tmp_arr(i,j,k-1));
+
213  Real zflux_r_hi = -z_t_arr(i,j,k+1) * 0.5 * (r0_tmp_arr(i,j,k) + r0_tmp_arr(i,j,k+1));
+
214 
+
215  Real zflux_rt_lo = zflux_r_lo * 0.5 * (rt0_tmp_arr(i,j,k)/r0_tmp_arr(i,j,k) + rt0_tmp_arr(i,j,k-1)/r0_tmp_arr(i,j,k-1));
+
216  Real zflux_rt_hi = zflux_r_hi * 0.5 * (rt0_tmp_arr(i,j,k)/r0_tmp_arr(i,j,k) + rt0_tmp_arr(i,j,k+1)/r0_tmp_arr(i,j,k+1));
217 
-
218  Real src_r = - invdetJ * ( zflux_r_hi - zflux_r_lo ) * dxInv[2];
-
219  Real src_rt = - invdetJ * ( zflux_rt_hi - zflux_rt_lo ) * dxInv[2];
-
220 
-
221  Real rho0_new = dJ_old_arr(i,j,k) * r0_arr(i,j,k) + dt_base * dJ_src_arr(i,j,k) * src_r;
-
222  Real rt0_tmp_new = dJ_old_arr(i,j,k) * rt0_arr(i,j,k) + dt_base * dJ_src_arr(i,j,k) * src_rt;
-
223 
-
224  r0_new_arr(i,j,k) = rho0_new / dJ_new_arr(i,j,k);
-
225  rt0_tmp_new /= dJ_new_arr(i,j,k);
-
226 
-
227  p0_new_arr(i,j,k) = getPgivenRTh(rt0_tmp_new);
-
228  pi0_new_arr(i,j,k) = getExnergivenRTh(rt0_tmp_new, l_rdOcp);
-
229  th0_new_arr(i,j,k) = rt0_tmp_new / r0_new_arr(i,j,k);
-
230  });
-
231  } // MFIter
-
232  r0_new->FillBoundary(fine_geom.periodicity());
-
233  p0_new->FillBoundary(fine_geom.periodicity());
-
234 
-
235  } else { // If not moving_terrain
+
218  Real invdetJ = 1.0 / dJ_src_arr(i,j,k);
+
219 
+
220  Real src_r = - invdetJ * ( zflux_r_hi - zflux_r_lo ) * dxInv[2];
+
221  Real src_rt = - invdetJ * ( zflux_rt_hi - zflux_rt_lo ) * dxInv[2];
+
222 
+
223  Real rho0_new = dJ_old_arr(i,j,k) * r0_arr(i,j,k) + dt_base * dJ_src_arr(i,j,k) * src_r;
+
224  Real rt0_tmp_new = dJ_old_arr(i,j,k) * rt0_arr(i,j,k) + dt_base * dJ_src_arr(i,j,k) * src_rt;
+
225 
+
226  r0_new_arr(i,j,k) = rho0_new / dJ_new_arr(i,j,k);
+
227  rt0_tmp_new /= dJ_new_arr(i,j,k);
+
228 
+
229  p0_new_arr(i,j,k) = getPgivenRTh(rt0_tmp_new);
+
230  pi0_new_arr(i,j,k) = getExnergivenRTh(rt0_tmp_new, l_rdOcp);
+
231  th0_new_arr(i,j,k) = rt0_tmp_new / r0_new_arr(i,j,k);
+
232  });
+
233  } // MFIter
+
234  r0_new->FillBoundary(fine_geom.periodicity());
+
235  p0_new->FillBoundary(fine_geom.periodicity());
236 
-
237  make_mom_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim,
-
238  z_phys_nd[level], z_phys_cc[level],
-
239  xvel_new, yvel_new, zvel_new,
-
240  xmom_src, ymom_src, zmom_src,
-
241  base_state[level], forest_drag, fine_geom, solverChoice,
-
242  mapfac_m[level], mapfac_u[level], mapfac_v[level],
-
243  dptr_u_geos, dptr_v_geos, dptr_wbar_sub,
-
244  d_rayleigh_ptrs_at_lev, d_sponge_ptrs_at_lev,
-
245  input_sounding_data, n_qstate);
-
246 
-
247  erf_slow_rhs_pre(level, finest_level, nrk, slow_dt, S_rhs, S_old, S_data, S_prim, S_scratch,
-
248  xvel_new, yvel_new, zvel_new,
-
249  z_t_rk[level], cc_src, xmom_src, ymom_src, zmom_src,
-
250  (level > 0) ? &zmom_crse_rhs[level] : nullptr,
-
251  Tau11_lev[level].get(), Tau22_lev[level].get(), Tau33_lev[level].get(), Tau12_lev[level].get(),
-
252  Tau13_lev[level].get(), Tau21_lev[level].get(), Tau23_lev[level].get(), Tau31_lev[level].get(),
-
253  Tau32_lev[level].get(), SmnSmn, eddyDiffs, Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3,Q2fx3, Diss,
-
254  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
-
255  z_phys_nd[level], ax[level], ay[level], az[level], detJ_cc[level], p0,
-
256  pp_inc[level],
-
257  mapfac_m[level], mapfac_u[level], mapfac_v[level],
-
258 #ifdef ERF_USE_EB
-
259  EBFactory(level),
-
260 #endif
-
261  fr_as_crse, fr_as_fine);
-
262 
-
263  add_thin_body_sources(xmom_src, ymom_src, zmom_src,
-
264  xflux_imask[level], yflux_imask[level], zflux_imask[level],
-
265  thin_xforce[level], thin_yforce[level], thin_zforce[level]);
-
266  }
-
267 
-
268 #ifdef ERF_USE_NETCDF
-
269  // Populate RHS for relaxation zones if using real bcs
-
270  if (use_real_bcs && (level == 0)) {
-
271  if (real_width>0) {
-
272  realbdy_compute_interior_ghost_rhs(bdy_time_interval, start_bdy_time, new_stage_time, slow_dt,
-
273  real_width, real_set_width, fine_geom,
-
274  S_rhs, S_old, S_data,
-
275  bdy_data_xlo, bdy_data_xhi,
-
276  bdy_data_ylo, bdy_data_yhi);
-
277  }
-
278  }
-
279 #endif
-
280 
-
281 #if 0
-
282  // HACK -- NO RELAXATION INSIDE FINE GRIDS
-
283  // Compute RHS for fine interior ghost
-
284  if (level > 0 && cf_width > 0) {
-
285  fine_compute_interior_ghost_rhs(new_stage_time, slow_dt,
-
286  cf_width, cf_set_width, fine_geom,
-
287  &FPr_c[level-1], &FPr_u[level-1], &FPr_v[level-1], &FPr_w[level-1],
-
288  domain_bcs_type, S_rhs, S_data);
-
289  }
-
290 #endif
-
291  }; // end slow_rhs_fun_pre
-
292 
-
293  // *************************************************************
-
294  // The "slow" integrator for MRI and the only integrator for SRI
+
237  } else { // If not moving_terrain
+
238 
+
239  make_mom_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim,
+
240  z_phys_nd[level], z_phys_cc[level],
+
241  xvel_new, yvel_new, zvel_new,
+
242  xmom_src, ymom_src, zmom_src,
+
243  base_state[level], forest_drag, fine_geom, solverChoice,
+
244  mapfac_m[level], mapfac_u[level], mapfac_v[level],
+
245  dptr_u_geos, dptr_v_geos, dptr_wbar_sub,
+
246  d_rayleigh_ptrs_at_lev, d_sponge_ptrs_at_lev,
+
247  input_sounding_data, n_qstate);
+
248 
+
249  erf_slow_rhs_pre(level, finest_level, nrk, slow_dt, S_rhs, S_old, S_data, S_prim, S_scratch,
+
250  xvel_new, yvel_new, zvel_new,
+
251  z_t_rk[level], cc_src, xmom_src, ymom_src, zmom_src,
+
252  (level > 0) ? &zmom_crse_rhs[level] : nullptr,
+
253  Tau11_lev[level].get(), Tau22_lev[level].get(), Tau33_lev[level].get(), Tau12_lev[level].get(),
+
254  Tau13_lev[level].get(), Tau21_lev[level].get(), Tau23_lev[level].get(), Tau31_lev[level].get(),
+
255  Tau32_lev[level].get(), SmnSmn, eddyDiffs, Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3,Q2fx3, Diss,
+
256  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
+
257  z_phys_nd[level], ax[level], ay[level], az[level], detJ_cc[level], p0,
+
258  pp_inc[level],
+
259  mapfac_m[level], mapfac_u[level], mapfac_v[level],
+
260 #ifdef ERF_USE_EB
+
261  EBFactory(level),
+
262 #endif
+
263  fr_as_crse, fr_as_fine);
+
264 
+
265  add_thin_body_sources(xmom_src, ymom_src, zmom_src,
+
266  xflux_imask[level], yflux_imask[level], zflux_imask[level],
+
267  thin_xforce[level], thin_yforce[level], thin_zforce[level]);
+
268  }
+
269 
+
270 #ifdef ERF_USE_NETCDF
+
271  // Populate RHS for relaxation zones if using real bcs
+
272  if (use_real_bcs && (level == 0)) {
+
273  if (real_width>0) {
+
274  realbdy_compute_interior_ghost_rhs(bdy_time_interval, start_bdy_time, new_stage_time, slow_dt,
+
275  real_width, real_set_width, fine_geom,
+
276  S_rhs, S_old, S_data,
+
277  bdy_data_xlo, bdy_data_xhi,
+
278  bdy_data_ylo, bdy_data_yhi);
+
279  }
+
280  }
+
281 #endif
+
282 
+
283 #if 0
+
284  // HACK -- NO RELAXATION INSIDE FINE GRIDS
+
285  // Compute RHS for fine interior ghost
+
286  if (level > 0 && cf_width > 0) {
+
287  fine_compute_interior_ghost_rhs(new_stage_time, slow_dt,
+
288  cf_width, cf_set_width, fine_geom,
+
289  &FPr_c[level-1], &FPr_u[level-1], &FPr_v[level-1], &FPr_w[level-1],
+
290  domain_bcs_type, S_rhs, S_data);
+
291  }
+
292 #endif
+
293  }; // end slow_rhs_fun_pre
+
294 
295  // *************************************************************
-
296  auto slow_rhs_fun_post = [&](Vector<MultiFab>& S_rhs,
-
297  Vector<MultiFab>& S_old,
-
298  Vector<MultiFab>& S_new,
-
299  Vector<MultiFab>& S_data,
-
300  Vector<MultiFab>& S_scratch,
-
301  const Real old_step_time,
-
302  const Real old_stage_time,
-
303  const Real new_stage_time,
-
304  const int nrk)
-
305  {
-
306  amrex::ignore_unused(nrk);
-
307 
-
308  // Note that the "old" and "new" metric terms correspond to
-
309  // t^n and the RK stage (either t^*, t^** or t^{n+1} that this source
-
310  // will be used to advance to
-
311  Real slow_dt = new_stage_time - old_step_time;
-
312 
-
313  if (verbose) amrex::Print() << "Time integration of scalars at level " << level
-
314  << " from " << old_step_time << " to " << new_stage_time
-
315  << " with dt = " << slow_dt
-
316  << " using RHS created at " << old_stage_time << std::endl;
-
317 
-
318  int n_qstate = micro->Get_Qstate_Size();
+
296  // The "slow" integrator for MRI and the only integrator for SRI
+
297  // *************************************************************
+
298  auto slow_rhs_fun_post = [&](Vector<MultiFab>& S_rhs,
+
299  Vector<MultiFab>& S_old,
+
300  Vector<MultiFab>& S_new,
+
301  Vector<MultiFab>& S_data,
+
302  Vector<MultiFab>& S_scratch,
+
303  const Real old_step_time,
+
304  const Real old_stage_time,
+
305  const Real new_stage_time,
+
306  const int nrk)
+
307  {
+
308  amrex::ignore_unused(nrk);
+
309 
+
310  // Note that the "old" and "new" metric terms correspond to
+
311  // t^n and the RK stage (either t^*, t^** or t^{n+1} that this source
+
312  // will be used to advance to
+
313  Real slow_dt = new_stage_time - old_step_time;
+
314 
+
315  if (verbose) amrex::Print() << "Time integration of scalars at level " << level
+
316  << " from " << old_step_time << " to " << new_stage_time
+
317  << " with dt = " << slow_dt
+
318  << " using RHS created at " << old_stage_time << std::endl;
319 
-
320 #if defined(ERF_USE_NETCDF)
-
321  bool moist_set_rhs = false;
-
322  if ( use_real_bcs &&
-
323  (level==0) &&
-
324  (real_set_width > 0) &&
-
325  (solverChoice.moisture_type != MoistureType::None) )
-
326  {
-
327  moist_set_rhs = true;
-
328  }
-
329 #endif
-
330 
-
331  // *************************************************************************
-
332  // Set up flux registers if using two_way coupling
+
320  int n_qstate = micro->Get_Qstate_Size();
+
321 
+
322 #if defined(ERF_USE_NETCDF)
+
323  bool moist_set_rhs = false;
+
324  if ( use_real_bcs &&
+
325  (level==0) &&
+
326  (real_set_width > 0) &&
+
327  (solverChoice.moisture_type != MoistureType::None) )
+
328  {
+
329  moist_set_rhs = true;
+
330  }
+
331 #endif
+
332 
333  // *************************************************************************
-
334  YAFluxRegister* fr_as_crse = nullptr;
-
335  YAFluxRegister* fr_as_fine = nullptr;
-
336  if (solverChoice.coupling_type == CouplingType::TwoWay)
-
337  {
-
338  if (level < finest_level) {
-
339  fr_as_crse = getAdvFluxReg(level+1);
-
340  }
-
341  if (level > 0) {
-
342  fr_as_fine = getAdvFluxReg(level);
-
343  }
-
344  }
-
345 
-
346  // Moving terrain
-
347  if ( solverChoice.terrain_type == TerrainType::Moving ) {
-
348  erf_slow_rhs_post(level, finest_level, nrk, slow_dt, n_qstate,
-
349  S_rhs, S_old, S_new, S_data, S_prim, S_scratch,
-
350  xvel_new, yvel_new, zvel_new, cc_src, SmnSmn, eddyDiffs,
-
351  Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3, Q2fx3, Diss,
-
352  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
-
353  z_phys_nd[level], ax[level], ay[level], az[level], detJ_cc[level], detJ_cc_new[level],
-
354  mapfac_m[level], mapfac_u[level], mapfac_v[level],
-
355 #ifdef ERF_USE_EB
-
356  EBFactory(level),
-
357 #endif
-
358 #if defined(ERF_USE_NETCDF)
-
359  moist_set_rhs, bdy_time_interval, start_bdy_time, new_stage_time,
-
360  real_width, real_set_width,
-
361  bdy_data_xlo, bdy_data_xhi, bdy_data_ylo, bdy_data_yhi,
-
362 #endif
-
363  fr_as_crse, fr_as_fine);
-
364  } else {
-
365  erf_slow_rhs_post(level, finest_level, nrk, slow_dt, n_qstate,
-
366  S_rhs, S_old, S_new, S_data, S_prim, S_scratch,
-
367  xvel_new, yvel_new, zvel_new, cc_src, SmnSmn, eddyDiffs,
-
368  Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3, Q2fx3, Diss,
-
369  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
-
370  z_phys_nd[level], ax[level], ay[level], az[level], detJ_cc[level], detJ_cc[level],
-
371  mapfac_m[level], mapfac_u[level], mapfac_v[level],
-
372 #ifdef ERF_USE_EB
-
373  EBFactory(level),
-
374 #endif
-
375 #if defined(ERF_USE_NETCDF)
-
376  moist_set_rhs, bdy_time_interval, start_bdy_time, new_stage_time,
-
377  real_width, real_set_width,
-
378  bdy_data_xlo, bdy_data_xhi, bdy_data_ylo, bdy_data_yhi,
-
379 #endif
-
380  fr_as_crse, fr_as_fine);
-
381  }
-
382 
-
383  // Apply boundary conditions on all the state variables that have been updated
-
384  // in both the fast and slow integrators
-
385  apply_bcs(S_new, new_stage_time, S_new[IntVars::cons].nGrow(), S_new[IntVars::xmom].nGrow(),
-
386  fast_only=false, vel_and_mom_synced=false);
-
387 
-
388  }; // end slow_rhs_fun_post
+
334  // Set up flux registers if using two_way coupling
+
335  // *************************************************************************
+
336  YAFluxRegister* fr_as_crse = nullptr;
+
337  YAFluxRegister* fr_as_fine = nullptr;
+
338  if (solverChoice.coupling_type == CouplingType::TwoWay)
+
339  {
+
340  if (level < finest_level) {
+
341  fr_as_crse = getAdvFluxReg(level+1);
+
342  }
+
343  if (level > 0) {
+
344  fr_as_fine = getAdvFluxReg(level);
+
345  }
+
346  }
+
347 
+
348  // Moving terrain
+
349  if ( solverChoice.terrain_type == TerrainType::Moving ) {
+
350  erf_slow_rhs_post(level, finest_level, nrk, slow_dt, n_qstate,
+
351  S_rhs, S_old, S_new, S_data, S_prim, S_scratch,
+
352  xvel_new, yvel_new, zvel_new, cc_src, SmnSmn, eddyDiffs,
+
353  Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3, Q2fx3, Diss,
+
354  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
+
355  z_phys_nd[level], ax[level], ay[level], az[level], detJ_cc[level], detJ_cc_new[level],
+
356  mapfac_m[level], mapfac_u[level], mapfac_v[level],
+
357 #ifdef ERF_USE_EB
+
358  EBFactory(level),
+
359 #endif
+
360 #if defined(ERF_USE_NETCDF)
+
361  moist_set_rhs, bdy_time_interval, start_bdy_time, new_stage_time,
+
362  real_width, real_set_width,
+
363  bdy_data_xlo, bdy_data_xhi, bdy_data_ylo, bdy_data_yhi,
+
364 #endif
+
365  fr_as_crse, fr_as_fine);
+
366  } else {
+
367  erf_slow_rhs_post(level, finest_level, nrk, slow_dt, n_qstate,
+
368  S_rhs, S_old, S_new, S_data, S_prim, S_scratch,
+
369  xvel_new, yvel_new, zvel_new, cc_src, SmnSmn, eddyDiffs,
+
370  Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3, Q2fx3, Diss,
+
371  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
+
372  z_phys_nd[level], ax[level], ay[level], az[level], detJ_cc[level], detJ_cc[level],
+
373  mapfac_m[level], mapfac_u[level], mapfac_v[level],
+
374 #ifdef ERF_USE_EB
+
375  EBFactory(level),
+
376 #endif
+
377 #if defined(ERF_USE_NETCDF)
+
378  moist_set_rhs, bdy_time_interval, start_bdy_time, new_stage_time,
+
379  real_width, real_set_width,
+
380  bdy_data_xlo, bdy_data_xhi, bdy_data_ylo, bdy_data_yhi,
+
381 #endif
+
382  fr_as_crse, fr_as_fine);
+
383  }
+
384 
+
385  // Apply boundary conditions on all the state variables that have been updated
+
386  // in both the fast and slow integrators
+
387  apply_bcs(S_new, new_stage_time, S_new[IntVars::cons].nGrow(), S_new[IntVars::xmom].nGrow(),
+
388  fast_only=false, vel_and_mom_synced=false);
389 
-
390  auto slow_rhs_fun_inc = [&](Vector<MultiFab>& S_rhs,
-
391  Vector<MultiFab>& S_old,
-
392  Vector<MultiFab>& S_data,
-
393  Vector<MultiFab>& S_scratch,
-
394  const Real old_step_time,
-
395  const Real old_stage_time,
-
396  const Real new_stage_time,
-
397  const int nrk)
-
398  {
-
399  BL_PROFILE("slow_rhs_fun_inc");
-
400  if (verbose) Print() << "Making slow rhs at time " << old_stage_time << " for fast variables advancing from " <<
-
401  old_step_time << " to " << new_stage_time << std::endl;
-
402  //
-
403  // Define primitive variables for all later RK stages
-
404  // (We have already done this for the first RK step)
-
405  //
-
406  if (nrk > 0) {
-
407  int ng_cons = S_data[IntVars::cons].nGrow();
-
408  cons_to_prim(S_data[IntVars::cons], ng_cons);
-
409  }
-
410 
-
411  Real slow_dt = new_stage_time - old_step_time;
+
390  }; // end slow_rhs_fun_post
+
391 
+
392  auto slow_rhs_fun_inc = [&](Vector<MultiFab>& S_rhs,
+
393  Vector<MultiFab>& S_old,
+
394  Vector<MultiFab>& S_data,
+
395  Vector<MultiFab>& S_scratch,
+
396  const Real old_step_time,
+
397  const Real old_stage_time,
+
398  const Real new_stage_time,
+
399  const int nrk)
+
400  {
+
401  BL_PROFILE("slow_rhs_fun_inc");
+
402  if (verbose) Print() << "Making slow rhs at time " << old_stage_time << " for fast variables advancing from " <<
+
403  old_step_time << " to " << new_stage_time << std::endl;
+
404  //
+
405  // Define primitive variables for all later RK stages
+
406  // (We have already done this for the first RK step)
+
407  //
+
408  if (nrk > 0) {
+
409  int ng_cons = S_data[IntVars::cons].nGrow();
+
410  cons_to_prim(S_data[IntVars::cons], ng_cons);
+
411  }
412 
-
413  // *************************************************************************
-
414  // Set up flux registers if using two_way coupling
+
413  Real slow_dt = new_stage_time - old_step_time;
+
414 
415  // *************************************************************************
-
416  YAFluxRegister* fr_as_crse = nullptr;
-
417  YAFluxRegister* fr_as_fine = nullptr;
-
418  if (solverChoice.coupling_type == CouplingType::TwoWay) {
-
419  if (level < finest_level) {
-
420  fr_as_crse = getAdvFluxReg(level+1);
-
421  fr_as_crse->reset();
-
422  }
-
423  if (level > 0) {
-
424  fr_as_fine = getAdvFluxReg(level);
-
425  }
-
426  }
-
427 
-
428  Real* dptr_u_geos = solverChoice.have_geo_wind_profile ? d_u_geos[level].data(): nullptr;
-
429  Real* dptr_v_geos = solverChoice.have_geo_wind_profile ? d_v_geos[level].data(): nullptr;
-
430 
-
431  // Canopy data for mom sources
-
432  MultiFab* forest_drag = nullptr;
-
433  if (solverChoice.do_forest) { forest_drag = m_forest[level]->get_drag_field(); }
-
434 
-
435  make_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim, cc_src, z_phys_cc[level],
-
436 #if defined(ERF_USE_RRTMGP)
-
437  qheating_rates[level],
-
438 #endif
-
439  fine_geom, solverChoice,
-
440  mapfac_u[level], mapfac_v[level], mapfac_m[level],
-
441  dptr_rhotheta_src, dptr_rhoqt_src,
-
442  dptr_wbar_sub, d_rayleigh_ptrs_at_lev,
-
443  input_sounding_data, turbPert);
-
444 
-
445  int n_qstate = micro->Get_Qstate_Size();
-
446  make_mom_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim,
-
447  z_phys_nd[level], z_phys_cc[level],
-
448  xvel_new, yvel_new, zvel_new,
-
449  xmom_src, ymom_src, zmom_src,
-
450  base_state[level], forest_drag, fine_geom, solverChoice,
-
451  mapfac_m[level], mapfac_u[level], mapfac_v[level],
-
452  dptr_u_geos, dptr_v_geos, dptr_wbar_sub,
-
453  d_rayleigh_ptrs_at_lev, d_sponge_ptrs_at_lev,
-
454  input_sounding_data, n_qstate);
-
455 
-
456  erf_slow_rhs_pre(level, finest_level, nrk, slow_dt,
-
457  S_rhs, S_old, S_data, S_prim, S_scratch,
-
458  xvel_new, yvel_new, zvel_new,
-
459  z_t_rk[level], cc_src, xmom_src, ymom_src, zmom_src,
-
460  (level > 0) ? &zmom_crse_rhs[level] : nullptr,
-
461  Tau11_lev[level].get(), Tau22_lev[level].get(), Tau33_lev[level].get(), Tau12_lev[level].get(),
-
462  Tau13_lev[level].get(), Tau21_lev[level].get(), Tau23_lev[level].get(), Tau31_lev[level].get(),
-
463  Tau32_lev[level].get(), SmnSmn, eddyDiffs, Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3, Q2fx3, Diss,
-
464  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
-
465  z_phys_nd[level], ax[level], ay[level], az[level], detJ_cc[level], p0,
-
466  pp_inc[level],
-
467  mapfac_m[level], mapfac_u[level], mapfac_v[level],
-
468 #ifdef ERF_USE_EB
-
469  EBFactory(level),
-
470 #endif
-
471  fr_as_crse, fr_as_fine);
-
472 
-
473  add_thin_body_sources(xmom_src, ymom_src, zmom_src,
-
474  xflux_imask[level], yflux_imask[level], zflux_imask[level],
-
475  thin_xforce[level], thin_yforce[level], thin_zforce[level]);
-
476 
-
477 #ifdef ERF_USE_NETCDF
-
478  // Populate RHS for relaxation zones if using real bcs
-
479  if (use_real_bcs && (level == 0)) {
-
480  if (real_width>0) {
-
481  realbdy_compute_interior_ghost_rhs(bdy_time_interval, start_bdy_time, new_stage_time, slow_dt,
-
482  real_width, real_set_width, fine_geom,
-
483  S_rhs, S_old, S_data,
-
484  bdy_data_xlo, bdy_data_xhi,
-
485  bdy_data_ylo, bdy_data_yhi);
-
486  }
-
487  }
-
488 #endif
-
489  }; // end slow_rhs_fun_inc
+
416  // Set up flux registers if using two_way coupling
+
417  // *************************************************************************
+
418  YAFluxRegister* fr_as_crse = nullptr;
+
419  YAFluxRegister* fr_as_fine = nullptr;
+
420  if (solverChoice.coupling_type == CouplingType::TwoWay) {
+
421  if (level < finest_level) {
+
422  fr_as_crse = getAdvFluxReg(level+1);
+
423  fr_as_crse->reset();
+
424  }
+
425  if (level > 0) {
+
426  fr_as_fine = getAdvFluxReg(level);
+
427  }
+
428  }
+
429 
+
430  Real* dptr_u_geos = solverChoice.have_geo_wind_profile ? d_u_geos[level].data(): nullptr;
+
431  Real* dptr_v_geos = solverChoice.have_geo_wind_profile ? d_v_geos[level].data(): nullptr;
+
432 
+
433  // Canopy data for mom sources
+
434  MultiFab* forest_drag = nullptr;
+
435  if (solverChoice.do_forest) { forest_drag = m_forest[level]->get_drag_field(); }
+
436 
+
437  make_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim, cc_src, z_phys_cc[level],
+
438 #if defined(ERF_USE_RRTMGP)
+
439  qheating_rates[level],
+
440 #endif
+
441  fine_geom, solverChoice,
+
442  mapfac_u[level], mapfac_v[level], mapfac_m[level],
+
443  dptr_rhotheta_src, dptr_rhoqt_src,
+
444  dptr_wbar_sub, d_rayleigh_ptrs_at_lev,
+
445  input_sounding_data, turbPert);
+
446 
+
447  int n_qstate = micro->Get_Qstate_Size();
+
448  make_mom_sources(level, nrk, slow_dt, old_stage_time, S_data, S_prim,
+
449  z_phys_nd[level], z_phys_cc[level],
+
450  xvel_new, yvel_new, zvel_new,
+
451  xmom_src, ymom_src, zmom_src,
+
452  base_state[level], forest_drag, fine_geom, solverChoice,
+
453  mapfac_m[level], mapfac_u[level], mapfac_v[level],
+
454  dptr_u_geos, dptr_v_geos, dptr_wbar_sub,
+
455  d_rayleigh_ptrs_at_lev, d_sponge_ptrs_at_lev,
+
456  input_sounding_data, n_qstate);
+
457 
+
458  erf_slow_rhs_pre(level, finest_level, nrk, slow_dt,
+
459  S_rhs, S_old, S_data, S_prim, S_scratch,
+
460  xvel_new, yvel_new, zvel_new,
+
461  z_t_rk[level], cc_src, xmom_src, ymom_src, zmom_src,
+
462  (level > 0) ? &zmom_crse_rhs[level] : nullptr,
+
463  Tau11_lev[level].get(), Tau22_lev[level].get(), Tau33_lev[level].get(), Tau12_lev[level].get(),
+
464  Tau13_lev[level].get(), Tau21_lev[level].get(), Tau23_lev[level].get(), Tau31_lev[level].get(),
+
465  Tau32_lev[level].get(), SmnSmn, eddyDiffs, Hfx1, Hfx2, Hfx3, Q1fx1, Q1fx2, Q1fx3, Q2fx3, Diss,
+
466  fine_geom, solverChoice, m_most, domain_bcs_type_d, domain_bcs_type,
+
467  z_phys_nd[level], ax[level], ay[level], az[level], detJ_cc[level], p0,
+
468  pp_inc[level],
+
469  mapfac_m[level], mapfac_u[level], mapfac_v[level],
+
470 #ifdef ERF_USE_EB
+
471  EBFactory(level),
+
472 #endif
+
473  fr_as_crse, fr_as_fine);
+
474 
+
475  add_thin_body_sources(xmom_src, ymom_src, zmom_src,
+
476  xflux_imask[level], yflux_imask[level], zflux_imask[level],
+
477  thin_xforce[level], thin_yforce[level], thin_zforce[level]);
+
478 
+
479 #ifdef ERF_USE_NETCDF
+
480  // Populate RHS for relaxation zones if using real bcs
+
481  if (use_real_bcs && (level == 0)) {
+
482  if (real_width>0) {
+
483  realbdy_compute_interior_ghost_rhs(bdy_time_interval, start_bdy_time, new_stage_time, slow_dt,
+
484  real_width, real_set_width, fine_geom,
+
485  S_rhs, S_old, S_data,
+
486  bdy_data_xlo, bdy_data_xhi,
+
487  bdy_data_ylo, bdy_data_yhi);
+
488  }
+
489  }
+
490 #endif
+
491  }; // end slow_rhs_fun_inc
getPgivenRTh
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getPgivenRTh(const amrex::Real rhotheta, const amrex::Real qv=0.)
Definition: ERF_EOS.H:84
getExnergivenRTh
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getExnergivenRTh(const amrex::Real rhotheta, const amrex::Real rdOcp, const amrex::Real qv=0.0)
Definition: ERF_EOS.H:159
getRhoThetagivenP
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getRhoThetagivenP(const amrex::Real p, const amrex::Real qv=0.0)
Definition: ERF_EOS.H:175
@@ -582,9 +584,9 @@
realbdy_compute_interior_ghost_rhs
void realbdy_compute_interior_ghost_rhs(const Real &bdy_time_interval, const Real &start_bdy_time, const Real &time, const Real &delta_t, int width, int set_width, const Geometry &geom, Vector< MultiFab > &S_rhs, Vector< MultiFab > &S_old_data, Vector< MultiFab > &S_cur_data, Vector< Vector< FArrayBox >> &bdy_data_xlo, Vector< Vector< FArrayBox >> &bdy_data_xhi, Vector< Vector< FArrayBox >> &bdy_data_ylo, Vector< Vector< FArrayBox >> &bdy_data_yhi)
Definition: ERF_InteriorGhostCells.cpp:107
fine_compute_interior_ghost_rhs
void fine_compute_interior_ghost_rhs(const Real &time, const Real &delta_t, const int &width, const int &set_width, const Geometry &geom, ERFFillPatcher *FPr_c, ERFFillPatcher *FPr_u, ERFFillPatcher *FPr_v, ERFFillPatcher *FPr_w, Vector< BCRec > &domain_bcs_type, Vector< MultiFab > &S_rhs_f, Vector< MultiFab > &S_data_f)
Definition: ERF_InteriorGhostCells.cpp:520
ERF_Src_headers.H
-
slow_rhs_fun_inc
auto slow_rhs_fun_inc
Definition: ERF_TI_slow_rhs_fun.H:390
+
slow_rhs_fun_inc
auto slow_rhs_fun_inc
Definition: ERF_TI_slow_rhs_fun.H:392
slow_rhs_fun_pre
auto slow_rhs_fun_pre
Definition: ERF_TI_slow_rhs_fun.H:6
-
slow_rhs_fun_post
auto slow_rhs_fun_post
Definition: ERF_TI_slow_rhs_fun.H:296
+
slow_rhs_fun_post
auto slow_rhs_fun_post
Definition: ERF_TI_slow_rhs_fun.H:298
apply_bcs
auto apply_bcs
Definition: ERF_TI_utils.H:50
cons_to_prim
auto cons_to_prim
Definition: ERF_TI_utils.H:4
init_terrain_grid
void init_terrain_grid(int lev, const Geometry &geom, MultiFab &z_phys_nd, Vector< Real > const &z_levels_h, GpuArray< ERF_BC, AMREX_SPACEDIM *2 > &phys_bc_type)
Definition: ERF_TerrainMetrics.cpp:118
diff --git a/ERF__TI__substep__fun_8H_source.html b/ERF__TI__substep__fun_8H_source.html index f0a18b740b..34f2cd48cc 100644 --- a/ERF__TI__substep__fun_8H_source.html +++ b/ERF__TI__substep__fun_8H_source.html @@ -290,7 +290,7 @@
IntVars::cons
@ cons
Definition: ERF_IndexDefines.H:139
IntVars::zmom
@ zmom
Definition: ERF_IndexDefines.H:142
IntVars::xmom
@ xmom
Definition: ERF_IndexDefines.H:140
-
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:523
+
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:524
diff --git a/ERF__buoyancy__utils_8H.html b/ERF__buoyancy__utils_8H.html index 662147e0ec..d6853aac79 100644 --- a/ERF__buoyancy__utils_8H.html +++ b/ERF__buoyancy__utils_8H.html @@ -123,18 +123,16 @@   AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_anelastic (int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rv_over_rd, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)   -AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_default (int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data) -  AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_rhopert (int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &cell_data)   -AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type2 (int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real *rho_d_ptr, amrex::Real *theta_d_ptr, amrex::Real *qv_d_ptr, amrex::Real *qc_d_ptr, amrex::Real *qp_d_ptr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data) -  -AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type3 (int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real *rho_d_ptr, amrex::Real *theta_d_ptr, amrex::Real *qv_d_ptr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data) -  -AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type4 (int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real *rho_d_ptr, amrex::Real *theta_d_ptr, amrex::Real *qv_d_ptr, amrex::Real *qc_d_ptr, amrex::Real *qp_d_ptr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data) -  AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_Tpert (int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)   +AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_Thpert (int &i, int &j, int &k, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_prim) +  +AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_Tpert (int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data) +  +AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_Thpert (int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_prim) +  AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_anelastic_T (int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &cell_data)   @@ -199,17 +197,12 @@

17  amrex::Real theta_d_lo = cell_data(i,j,k-1,RhoTheta_comp)/cell_data(i,j,k-1,Rho_comp);
18  amrex::Real theta_d_hi = cell_data(i,j,k ,RhoTheta_comp)/cell_data(i,j,k ,Rho_comp);
19 
-
20  amrex::Real theta_d_wface = amrex::Real(0.5) * (theta_d_lo + theta_d_hi);
-
21 
-
22  amrex::Real theta_d_0_lo = th0_arr(i,j,k-1);
-
23  amrex::Real theta_d_0_hi = th0_arr(i,j,k );
-
24 
-
25  amrex::Real theta_d_0_wface = amrex::Real(0.5) * (theta_d_0_lo + theta_d_0_hi);
-
26 
-
27  amrex::Real rho0_wface = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
-
28 
-
29  return (-rho0_wface * grav_gpu * (theta_d_wface - theta_d_0_wface) / theta_d_0_wface);
-
30 }
+
20  amrex::Real theta_d_wface = amrex::Real(0.5) * (theta_d_lo + theta_d_hi);
+
21  amrex::Real theta_d0_wface = amrex::Real(0.5) * (th0_arr(i,j,k) + th0_arr(i,j,k-1));
+
22  amrex::Real rho0_wface = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
23 
+
24  return (-rho0_wface * grav_gpu * (theta_d_wface - theta_d0_wface) / theta_d0_wface);
+
25 }
Rho_comp
#define Rho_comp
Definition: ERF_IndexDefines.H:36
RhoTheta_comp
#define RhoTheta_comp
Definition: ERF_IndexDefines.H:37
@@ -288,20 +281,20 @@

-
275 {
-
276  amrex::Real rt0_hi = getRhoThetagivenP(p0_arr(i,j,k));
-
277  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), rt0_hi/r0_arr(i,j,k), rd_over_cp);
-
278  amrex::Real t_hi = getTgivenPandTh(p0_arr(i,j,k), cell_data(i,j,k,RhoTheta_comp)/r0_arr(i,j,k), rd_over_cp);
-
279  amrex::Real qplus = (t_hi-t0_hi)/t0_hi;
-
280 
-
281  amrex::Real rt0_lo = getRhoThetagivenP(p0_arr(i,j,k-1));
-
282  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), rt0_lo/r0_arr(i,j,k-1), rd_over_cp);
-
283  amrex::Real t_lo = getTgivenPandTh(p0_arr(i,j,k-1), cell_data(i,j,k-1,RhoTheta_comp)/r0_arr(i,j,k-1), rd_over_cp);
-
284  amrex::Real qminus = (t_lo-t0_lo)/t0_lo;
-
285 
-
286  amrex::Real r0_q_avg = amrex::Real(0.5) * (r0_arr(i,j,k) * qplus + r0_arr(i,j,k-1) * qminus);
-
287  return (-r0_q_avg * grav_gpu);
-
288 }
+
215 {
+
216  amrex::Real rt0_hi = getRhoThetagivenP(p0_arr(i,j,k));
+
217  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), rt0_hi/r0_arr(i,j,k), rd_over_cp);
+
218  amrex::Real t_hi = getTgivenPandTh(p0_arr(i,j,k), cell_data(i,j,k,RhoTheta_comp)/r0_arr(i,j,k), rd_over_cp);
+
219  amrex::Real q_hi = (t_hi-t0_hi)/t0_hi;
+
220 
+
221  amrex::Real rt0_lo = getRhoThetagivenP(p0_arr(i,j,k-1));
+
222  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), rt0_lo/r0_arr(i,j,k-1), rd_over_cp);
+
223  amrex::Real t_lo = getTgivenPandTh(p0_arr(i,j,k-1), cell_data(i,j,k-1,RhoTheta_comp)/r0_arr(i,j,k-1), rd_over_cp);
+
224  amrex::Real q_lo = (t_lo-t0_lo)/t0_lo;
+
225 
+
226  amrex::Real r0_q_avg = amrex::Real(0.5) * (r0_arr(i,j,k) * q_hi + r0_arr(i,j,k-1) * q_lo);
+
227  return (-r0_q_avg * grav_gpu);
+
228 }
getRhoThetagivenP
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getRhoThetagivenP(const amrex::Real p, const amrex::Real qv=0.0)
Definition: ERF_EOS.H:175
getTgivenPandTh
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getTgivenPandTh(const amrex::Real P, const amrex::Real th, const amrex::Real rdOcp)
Definition: ERF_EOS.H:32
@@ -317,14 +310,14 @@

-

◆ buoyancy_dry_default()

+ +

◆ buoyancy_dry_Thpert()

- + @@ -347,24 +340,12 @@

amrex::Real const & 

- - - - - - - - - - - - @@ -375,7 +356,7 @@

- + @@ -384,37 +365,28 @@

-
76 {
-
77  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
-
78  amrex::Real t_hi = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp), cell_data(i,j,k ,RhoTheta_comp));
-
79  amrex::Real qplus = (t_hi-t0_hi)/t0_hi;
-
80 
-
81  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), th0_arr(i,j,k-1), rd_over_cp);
-
82  amrex::Real t_lo = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp), cell_data(i,j,k-1,RhoTheta_comp));
-
83  amrex::Real qminus = (t_lo-t0_lo)/t0_lo;
-
84 
-
85  amrex::Real r0_q_avg = amrex::Real(0.5) * (r0_arr(i,j,k) * qplus + r0_arr(i,j,k-1) * qminus);
-
86  return (-r0_q_avg * grav_gpu);
-
87 }
-
getTgivenRandRTh
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getTgivenRandRTh(const amrex::Real rho, const amrex::Real rhotheta, const amrex::Real qv=0.0)
Definition: ERF_EOS.H:46
+
108 {
+
109  //
+
110  // TODO: we are currently using Theta_prime/Theta_0 to replace T_prime/T_0 - P_prime/P_0
+
111  // but I don't think that is quite right.
+
112  //
+
113  amrex::Real thetaprime_hi = (cell_prim(i,j,k ,PrimTheta_comp) - th0_arr(i,j,k )) / th0_arr(i,j,k );
+
114  amrex::Real thetaprime_lo = (cell_prim(i,j,k-1,PrimTheta_comp) - th0_arr(i,j,k-1)) / th0_arr(i,j,k-1);
+
115 
+
116  amrex::Real thp_avg = amrex::Real(0.5) * (thetaprime_hi + thetaprime_lo);
+
117  amrex::Real r0_avg = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
118 
+
119  return ( -r0_avg * grav_gpu * thp_avg);
+
120 }
+
PrimTheta_comp
#define PrimTheta_comp
Definition: ERF_IndexDefines.H:50

Referenced by make_buoyancy().

-Here is the call graph for this function:
-
-
- - - - - -
-
Here is the caller graph for this function:
-
- - +
+ + @@ -489,19 +461,25 @@

-
253 {
-
254  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
-
255  amrex::Real t_hi = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp), cell_data(i,j,k ,RhoTheta_comp));
-
256  amrex::Real qplus = (t_hi-t0_hi)/t0_hi;
-
257 
-
258  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), th0_arr(i,j,k-1), rd_over_cp);
-
259  amrex::Real t_lo = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp), cell_data(i,j,k-1,RhoTheta_comp));
-
260  amrex::Real qminus = (t_lo-t0_lo)/t0_lo;
-
261 
-
262  amrex::Real r0_q_avg = amrex::Real(0.5) * (r0_arr(i,j,k) * qplus + r0_arr(i,j,k-1) * qminus);
-
263  return (-r0_q_avg * grav_gpu);
-
264 }
-
+
84 {
+
85  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
+
86  amrex::Real t_hi = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp), cell_data(i,j,k ,RhoTheta_comp));
+
87 
+
88  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), th0_arr(i,j,k-1), rd_over_cp);
+
89  amrex::Real t_lo = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp), cell_data(i,j,k-1,RhoTheta_comp));
+
90 
+
91  amrex::Real tprime_hi = (t_hi-t0_hi)/t0_hi;
+
92  amrex::Real tprime_lo = (t_lo-t0_lo)/t0_lo;
+
93 
+
94  amrex::Real tp_avg = amrex::Real(0.5) * (tprime_hi + tprime_lo);
+
95  amrex::Real r0_avg = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
96 
+
97  return ( -r0_avg * grav_gpu * tp_avg);
+
98 }
+
getTgivenRandRTh
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getTgivenRandRTh(const amrex::Real rho, const amrex::Real rhotheta, const amrex::Real qv=0.0)
Definition: ERF_EOS.H:46
+
+

Referenced by make_buoyancy().

+
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+
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+
+
+ + + + + +

@@ -575,30 +563,25 @@

-
41 {
-
42  amrex::Real theta_d_lo = cell_data(i,j,k-1,RhoTheta_comp)/r0_arr(i,j,k-1);
-
43  amrex::Real qv_lo = cell_data(i,j,k-1,RhoQ1_comp) /r0_arr(i,j,k-1);
-
44  amrex::Real qc_lo = cell_data(i,j,k-1,RhoQ2_comp) /r0_arr(i,j,k-1);
-
45  amrex::Real qt_lo = qv_lo + qc_lo;
-
46  amrex::Real theta_v_lo = theta_d_lo * (1.0 - (1.0 - rv_over_rd)*qt_lo - rv_over_rd*qc_lo);
-
47 
-
48  amrex::Real theta_d_hi = cell_data(i,j,k,RhoTheta_comp)/r0_arr(i,j,k);
-
49  amrex::Real qv_hi = cell_data(i,j,k,RhoQ1_comp) /r0_arr(i,j,k);
-
50  amrex::Real qc_hi = cell_data(i,j,k,RhoQ2_comp) /r0_arr(i,j,k);
-
51  amrex::Real qt_hi = qv_hi + qc_hi;
-
52  amrex::Real theta_v_hi = theta_d_hi * (1.0 - (1.0 - rv_over_rd)*qt_hi - rv_over_rd*qc_hi);
-
53 
-
54  amrex::Real theta_v_wface = amrex::Real(0.5) * (theta_v_lo + theta_v_hi);
-
55 
-
56  amrex::Real theta_v_0_lo = th0_arr(i,j,k-1) * (1.0 - (1.0 - rv_over_rd)*qt_lo - rv_over_rd*qc_lo);
-
57  amrex::Real theta_v_0_hi = th0_arr(i,j,k ) * (1.0 - (1.0 - rv_over_rd)*qt_hi - rv_over_rd*qc_hi);
-
58 
-
59  amrex::Real theta_v_0_wface = amrex::Real(0.5) * (theta_v_0_lo + theta_v_0_hi);
-
60 
-
61  amrex::Real rho0_wface = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
-
62 
-
63  return (-rho0_wface * grav_gpu * (theta_v_wface - theta_v_0_wface) / theta_v_0_wface);
-
64 }
+
36 {
+
37  amrex::Real theta_d_lo = cell_data(i,j,k-1,RhoTheta_comp)/r0_arr(i,j,k-1);
+
38  amrex::Real qv_lo = cell_data(i,j,k-1,RhoQ1_comp) /r0_arr(i,j,k-1);
+
39  amrex::Real qc_lo = cell_data(i,j,k-1,RhoQ2_comp) /r0_arr(i,j,k-1);
+
40  amrex::Real qt_lo = qv_lo + qc_lo;
+
41  amrex::Real theta_v_lo = theta_d_lo * (1.0 - (1.0 - rv_over_rd)*qt_lo - rv_over_rd*qc_lo);
+
42 
+
43  amrex::Real theta_d_hi = cell_data(i,j,k,RhoTheta_comp)/r0_arr(i,j,k);
+
44  amrex::Real qv_hi = cell_data(i,j,k,RhoQ1_comp) /r0_arr(i,j,k);
+
45  amrex::Real qc_hi = cell_data(i,j,k,RhoQ2_comp) /r0_arr(i,j,k);
+
46  amrex::Real qt_hi = qv_hi + qc_hi;
+
47  amrex::Real theta_v_hi = theta_d_hi * (1.0 - (1.0 - rv_over_rd)*qt_hi - rv_over_rd*qc_hi);
+
48 
+
49  amrex::Real theta_v_wface = amrex::Real(0.5) * (theta_v_lo + theta_v_hi);
+
50  amrex::Real theta_v0_wface = amrex::Real(0.5) * (th0_arr(i,j,k) + th0_arr(i,j,k-1));
+
51  amrex::Real rho0_wface = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
52 
+
53  return (-rho0_wface * grav_gpu * (theta_v_wface - theta_v0_wface) / theta_v0_wface);
+
54 }
RhoQ2_comp
#define RhoQ2_comp
Definition: ERF_IndexDefines.H:43
RhoQ1_comp
#define RhoQ1_comp
Definition: ERF_IndexDefines.H:42
@@ -616,14 +599,14 @@

-

◆ buoyancy_rhopert()

+ +

◆ buoyancy_moist_Thpert()

AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_default AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_Thpert ( int &  i, grav_gpu,
amrex::Real const & rd_over_cp,
const amrex::Array4< const amrex::Real > &  r0_arr,
const amrex::Array4< const amrex::Real > & p0_arr,
const amrex::Array4< const amrex::Real > & cell_data cell_prim 
- + @@ -662,116 +645,13 @@

- - - - - - - -
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_rhopert AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_Thpert ( int &  i, const amrex::Array4< const amrex::Real > & cell_data 
)
-
-
97 {
-
98  amrex::Real rhop_hi = cell_data(i,j,k ,Rho_comp) - r0_arr(i,j,k );
-
99  amrex::Real rhop_lo = cell_data(i,j,k-1,Rho_comp) - r0_arr(i,j,k-1);
-
100  for (int q_offset(0); q_offset<n_qstate; ++q_offset) {
-
101  rhop_hi += cell_data(i,j,k ,RhoQ1_comp+q_offset);
-
102  rhop_lo += cell_data(i,j,k-1,RhoQ1_comp+q_offset);
-
103  }
-
104  return( grav_gpu * amrex::Real(0.5) * ( rhop_hi + rhop_lo ) );
-
105 }
-
-

Referenced by make_buoyancy().

-
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- - - - - -
- -
-
- -

◆ buoyancy_type2()

- -
-
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + - + @@ -780,61 +660,46 @@

-
121 {
-
122  amrex::Real tempp1d = getTgivenRandRTh(rho_d_ptr[k ], rho_d_ptr[k ]*theta_d_ptr[k ], qv_d_ptr[k ]);
-
123  amrex::Real tempm1d = getTgivenRandRTh(rho_d_ptr[k-1], rho_d_ptr[k-1]*theta_d_ptr[k-1], qv_d_ptr[k-1]);
-
124 
-
125  amrex::Real tempp3d = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp),
-
126  cell_data(i,j,k ,RhoTheta_comp),
-
127  cell_data(i,j,k ,RhoQ1_comp)/cell_data(i,j,k ,Rho_comp));
-
128  amrex::Real tempm3d = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp),
-
129  cell_data(i,j,k-1,RhoTheta_comp),
-
130  cell_data(i,j,k-1,RhoQ1_comp)/cell_data(i,j,k-1,Rho_comp));
-
131 
-
132  amrex::Real qv_plus = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
-
133  amrex::Real qv_minus = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
-
134 
-
135  amrex::Real qc_plus = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
-
136  amrex::Real qc_minus = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
-
137 
-
138  amrex::Real qp_plus = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
-
139  amrex::Real qp_minus = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
-
140 
-
141  amrex::Real qplus = 0.61 * ( qv_plus - qv_d_ptr[k] ) -
-
142  ( qc_plus - qc_d_ptr[k] +
-
143  qp_plus - qp_d_ptr[k] )
-
144  + (tempp3d-tempp1d)/tempp1d*(amrex::Real(1.0) + amrex::Real(0.61)*qv_d_ptr[k]-qc_d_ptr[k]-qp_d_ptr[k]);
-
145 
-
146  amrex::Real qminus = 0.61 * ( qv_minus - qv_d_ptr[k-1] ) -
-
147  ( qc_minus - qc_d_ptr[k-1] +
-
148  qp_minus - qp_d_ptr[k-1] )
-
149  + (tempm3d-tempm1d)/tempm1d*(amrex::Real(1.0) + amrex::Real(0.61)*qv_d_ptr[k-1]-qc_d_ptr[k-1]-qp_d_ptr[k-1]);
-
150 
-
151  amrex::Real qavg = amrex::Real(0.5) * (qplus + qminus);
-
152  amrex::Real r0avg = amrex::Real(0.5) * (rho_d_ptr[k] + rho_d_ptr[k-1]);
-
153 
-
154  return (-qavg * r0avg * grav_gpu);
-
155 }
+
172 {
+
173  //
+
174  // Note: this currently assumes the base state qv0 is identically zero
+
175  // TODO: generalize this to allow for moist base state
+
176  //
+
177  amrex::Real qv_hi = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
+
178  amrex::Real qv_lo = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
+
179 
+
180  amrex::Real qc_hi = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
+
181  amrex::Real qc_lo = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
+
182 
+
183  amrex::Real qp_hi = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
+
184  amrex::Real qp_lo = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
+
185 
+
186  //
+
187  // TODO: we are currently using Theta_prime/Theta_0 to replace T_prime/T_0 - P_prime/P_0
+
188  // but I don't think that is quite right.
+
189  //
+
190  amrex::Real q_hi = amrex::Real(0.61) * qv_hi - (qc_hi + qp_hi)
+
191  + (cell_prim(i,j,k ,PrimTheta_comp) - th0_arr(i,j,k )) / th0_arr(i,j,k );
+
192 
+
193  amrex::Real q_lo = amrex::Real(0.61) * qv_lo - (qc_lo + qp_lo)
+
194  + (cell_prim(i,j,k-1,PrimTheta_comp) - th0_arr(i,j,k-1)) / th0_arr(i,j,k-1);
+
195 
+
196  amrex::Real qavg = amrex::Real(0.5) * (q_hi + q_lo);
+
197  amrex::Real r0avg = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
198 
+
199  return ( -r0avg * grav_gpu * qavg);
+
200 }
PrimQ1_comp
#define PrimQ1_comp
Definition: ERF_IndexDefines.H:53
PrimQ2_comp
#define PrimQ2_comp
Definition: ERF_IndexDefines.H:54
PrimQ3_comp
#define PrimQ3_comp
Definition: ERF_IndexDefines.H:55

Referenced by make_buoyancy().

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- - +
+ + @@ -842,14 +707,14 @@

-

◆ buoyancy_type3()

+ +

◆ buoyancy_moist_Tpert()

AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type2 (int & i,
int & j,
int & k,
const int & n_qstate,
amrex::Real const & grav_gpu,
amrex::Real * rho_d_ptr,
amrex::Real * theta_d_ptr,
amrex::Real * qv_d_ptr,
amrex::Real * qc_d_ptr,
amrex::Real * qp_d_ptr,
const amrex::Array4< const amrex::Real > & cell_prim, th0_arr,
const amrex::Array4< const amrex::Real > & cell_data cell_prim 
- + @@ -881,20 +746,26 @@

- - + + - - + + - - + + + + + + + + @@ -915,52 +786,52 @@

-
169 {
-
170  amrex::Real tempp1d = getTgivenRandRTh(rho_d_ptr[k ], rho_d_ptr[k ]*theta_d_ptr[k ], qv_d_ptr[k ]);
-
171  amrex::Real tempm1d = getTgivenRandRTh(rho_d_ptr[k-1], rho_d_ptr[k-1]*theta_d_ptr[k-1], qv_d_ptr[k-1]);
-
172 
-
173  amrex::Real tempp3d = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp),
-
174  cell_data(i,j,k ,RhoTheta_comp),
-
175  cell_data(i,j,k ,RhoQ1_comp)/cell_data(i,j,k ,Rho_comp));
-
176  amrex::Real tempm3d = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp),
-
177  cell_data(i,j,k-1,RhoTheta_comp),
-
178  cell_data(i,j,k-1,RhoQ1_comp)/cell_data(i,j,k-1,Rho_comp));
-
179 
-
180  amrex::Real qv_plus = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
-
181  amrex::Real qv_minus = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
-
182 
-
183  amrex::Real qc_plus = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
-
184  amrex::Real qc_minus = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
-
185 
-
186  amrex::Real qp_plus = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
-
187  amrex::Real qp_minus = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
-
188 
-
189  amrex::Real qplus = 0.61 * qv_plus - (qc_plus + qp_plus) + (tempp3d-tempp1d)/tempp1d;
-
190 
-
191  amrex::Real qminus = 0.61 * qv_minus - (qc_minus + qp_minus) + (tempm3d-tempm1d)/tempm1d;
-
192 
-
193  amrex::Real qavg = amrex::Real(0.5) * (qplus + qminus);
-
194  amrex::Real r0avg = amrex::Real(0.5) * (rho_d_ptr[k] + rho_d_ptr[k-1]);
-
195 
-
196  return ( -qavg * r0avg * grav_gpu );
-
197 }
+
134 {
+
135  //
+
136  // Note: this currently assumes the base state qv0 is identically zero
+
137  // TODO: generalize this to allow for moist base state
+
138  //
+
139  amrex::Real qv_hi = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
+
140  amrex::Real qv_lo = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
+
141 
+
142  amrex::Real qc_hi = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
+
143  amrex::Real qc_lo = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
+
144 
+
145  amrex::Real qp_hi = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
+
146  amrex::Real qp_lo = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
+
147 
+
148  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
+
149  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
+
150 
+
151  amrex::Real t_hi = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp), cell_data(i,j,k ,RhoTheta_comp), qv_hi);
+
152  amrex::Real t_lo = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp), cell_data(i,j,k-1,RhoTheta_comp), qv_lo);
+
153 
+
154  amrex::Real q_hi = 0.61 * qv_hi - (qc_hi + qp_hi) + (t_hi-t0_hi)/t0_hi;
+
155  amrex::Real q_lo = 0.61 * qv_lo - (qc_lo + qp_lo) + (t_lo-t0_lo)/t0_lo;
+
156 
+
157  amrex::Real qavg = amrex::Real(0.5) * (q_hi + q_lo);
+
158  amrex::Real r0avg = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
159 
+
160  return ( -r0avg * grav_gpu * qavg);
+
161 }

Referenced by make_buoyancy().

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-
- - +
+ + @@ -968,14 +839,14 @@

-

◆ buoyancy_type4()

+ +

◆ buoyancy_rhopert()

AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type3 AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_Tpert ( int &  i, amrex::Real * rho_d_ptr, amrex::Real const & rd_over_cp,
amrex::Real * theta_d_ptr, const amrex::Array4< const amrex::Real > & r0_arr,
amrex::Real * qv_d_ptr, const amrex::Array4< const amrex::Real > & th0_arr,
const amrex::Array4< const amrex::Real > & p0_arr,
- + @@ -1004,41 +875,11 @@

amrex::Real const & 

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + @@ -1053,39 +894,23 @@

-
213 {
-
214  amrex::Real qv_plus = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
-
215  amrex::Real qv_minus = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
-
216 
-
217  amrex::Real qc_plus = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
-
218  amrex::Real qc_minus = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
-
219 
-
220  amrex::Real qp_plus = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
-
221  amrex::Real qp_minus = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
-
222 
-
223  amrex::Real qplus = amrex::Real(0.61) * ( qv_plus - qv_d_ptr[k] ) -
-
224  ( qc_plus - qc_d_ptr[k] +
-
225  qp_plus - qp_d_ptr[k] )
-
226  + (cell_data(i,j,k ,RhoTheta_comp)/cell_data(i,j,k ,Rho_comp) - theta_d_ptr[k ])/theta_d_ptr[k ];
-
227 
-
228  amrex::Real qminus = amrex::Real(0.61) * ( qv_minus - qv_d_ptr[k-1] ) -
-
229  ( qc_minus - qc_d_ptr[k-1] +
-
230  qp_minus - qp_d_ptr[k-1] )
-
231  + (cell_data(i,j,k-1,RhoTheta_comp)/cell_data(i,j,k-1,Rho_comp) - theta_d_ptr[k-1])/theta_d_ptr[k-1];
-
232 
-
233  amrex::Real qavg = amrex::Real(0.5) * (qplus + qminus);
-
234  amrex::Real r0avg = amrex::Real(0.5) * (rho_d_ptr[k] + rho_d_ptr[k-1]);
-
235 
-
236  return (-qavg * r0avg * grav_gpu);
-
237 }
+
64 {
+
65  amrex::Real rhop_hi = cell_data(i,j,k ,Rho_comp) - r0_arr(i,j,k );
+
66  amrex::Real rhop_lo = cell_data(i,j,k-1,Rho_comp) - r0_arr(i,j,k-1);
+
67  for (int q_offset(0); q_offset<n_qstate; ++q_offset) {
+
68  rhop_hi += cell_data(i,j,k ,RhoQ1_comp+q_offset);
+
69  rhop_lo += cell_data(i,j,k-1,RhoQ1_comp+q_offset);
+
70  }
+
71  return( grav_gpu * amrex::Real(0.5) * ( rhop_hi + rhop_lo ) );
+
72 }

Referenced by make_buoyancy().

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-
- - +
+ + diff --git a/ERF__buoyancy__utils_8H.js b/ERF__buoyancy__utils_8H.js index d976c63b25..9efb4efe15 100644 --- a/ERF__buoyancy__utils_8H.js +++ b/ERF__buoyancy__utils_8H.js @@ -2,11 +2,10 @@ var ERF__buoyancy__utils_8H = [ [ "buoyancy_dry_anelastic", "ERF__buoyancy__utils_8H.html#a5011865b681ba8438cde409a3d072ab7", null ], [ "buoyancy_dry_anelastic_T", "ERF__buoyancy__utils_8H.html#abb7188746139971e303834720b94464a", null ], - [ "buoyancy_dry_default", "ERF__buoyancy__utils_8H.html#adbe6d4b0c74e319d4ddd78f8499cb2e4", null ], + [ "buoyancy_dry_Thpert", "ERF__buoyancy__utils_8H.html#a5d830f8d1f69f421243bb525f1cb3451", null ], [ "buoyancy_dry_Tpert", "ERF__buoyancy__utils_8H.html#a7619875c059558175b6df4771ccc8515", null ], [ "buoyancy_moist_anelastic", "ERF__buoyancy__utils_8H.html#a7ed47bf58371d45d6ae8060a81f60dfc", null ], - [ "buoyancy_rhopert", "ERF__buoyancy__utils_8H.html#a43ed1d4e549a33792364f14118214fac", null ], - [ "buoyancy_type2", "ERF__buoyancy__utils_8H.html#a26fc88640f045b68ee840d0e3ca9c5b4", null ], - [ "buoyancy_type3", "ERF__buoyancy__utils_8H.html#a4a13d42f2955b06536439c62694e8c80", null ], - [ "buoyancy_type4", "ERF__buoyancy__utils_8H.html#a63617f7315553972dd394a9628b4dba1", null ] + [ "buoyancy_moist_Thpert", "ERF__buoyancy__utils_8H.html#aa012a8c78677190d8b51abe67b6526eb", null ], + [ "buoyancy_moist_Tpert", "ERF__buoyancy__utils_8H.html#aa3a740bcf18b82738afde22ade07fff9", null ], + [ "buoyancy_rhopert", "ERF__buoyancy__utils_8H.html#a43ed1d4e549a33792364f14118214fac", null ] ]; \ No newline at end of file diff --git a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_cgraph.map b/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_cgraph.map deleted file mode 100644 index 330f4f9394..0000000000 --- a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_cgraph.map +++ /dev/null @@ -1,4 +0,0 @@ - - - - diff --git a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_cgraph.md5 b/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_cgraph.md5 deleted file mode 100644 index b7cc71acf2..0000000000 --- a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_cgraph.md5 +++ /dev/null @@ -1 +0,0 @@ -cbcc8dff024794bd3163f307ffdaf69c \ No newline at end of file diff --git a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_cgraph.png b/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_cgraph.png deleted file mode 100644 index 828bea6052..0000000000 Binary files a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_cgraph.png and /dev/null differ diff --git a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_icgraph.md5 b/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_icgraph.md5 deleted file mode 100644 index b098ef3342..0000000000 --- a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_icgraph.md5 +++ /dev/null @@ -1 +0,0 @@ -6dad60905f28e3bd3bf0b58d16e3135d \ No newline at end of file diff --git a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_icgraph.png b/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_icgraph.png deleted file mode 100644 index 209bb41e05..0000000000 Binary files a/ERF__buoyancy__utils_8H_a26fc88640f045b68ee840d0e3ca9c5b4_icgraph.png and /dev/null differ diff --git a/ERF__buoyancy__utils_8H_a4a13d42f2955b06536439c62694e8c80_cgraph.map b/ERF__buoyancy__utils_8H_a4a13d42f2955b06536439c62694e8c80_cgraph.map deleted file mode 100644 index 71f2f5cc8d..0000000000 --- a/ERF__buoyancy__utils_8H_a4a13d42f2955b06536439c62694e8c80_cgraph.map +++ /dev/null @@ -1,4 +0,0 @@ - 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17  amrex::Real theta_d_lo = cell_data(i,j,k-1,RhoTheta_comp)/cell_data(i,j,k-1,Rho_comp);
18  amrex::Real theta_d_hi = cell_data(i,j,k ,RhoTheta_comp)/cell_data(i,j,k ,Rho_comp);
19 
-
20  amrex::Real theta_d_wface = amrex::Real(0.5) * (theta_d_lo + theta_d_hi);
-
21 
-
22  amrex::Real theta_d_0_lo = th0_arr(i,j,k-1);
-
23  amrex::Real theta_d_0_hi = th0_arr(i,j,k );
-
24 
-
25  amrex::Real theta_d_0_wface = amrex::Real(0.5) * (theta_d_0_lo + theta_d_0_hi);
+
20  amrex::Real theta_d_wface = amrex::Real(0.5) * (theta_d_lo + theta_d_hi);
+
21  amrex::Real theta_d0_wface = amrex::Real(0.5) * (th0_arr(i,j,k) + th0_arr(i,j,k-1));
+
22  amrex::Real rho0_wface = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
23 
+
24  return (-rho0_wface * grav_gpu * (theta_d_wface - theta_d0_wface) / theta_d0_wface);
+
25 }
26 
-
27  amrex::Real rho0_wface = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
-
28 
-
29  return (-rho0_wface * grav_gpu * (theta_d_wface - theta_d_0_wface) / theta_d_0_wface);
-
30 }
-
31 
-
32 AMREX_GPU_DEVICE
-
33 AMREX_FORCE_INLINE
-
34 amrex::Real
-
35 buoyancy_moist_anelastic (int& i, int& j, int& k,
-
36  amrex::Real const& grav_gpu,
-
37  amrex::Real const& rv_over_rd,
-
38  const amrex::Array4<const amrex::Real>& r0_arr,
-
39  const amrex::Array4<const amrex::Real>& th0_arr,
-
40  const amrex::Array4<const amrex::Real>& cell_data)
-
41 {
-
42  amrex::Real theta_d_lo = cell_data(i,j,k-1,RhoTheta_comp)/r0_arr(i,j,k-1);
-
43  amrex::Real qv_lo = cell_data(i,j,k-1,RhoQ1_comp) /r0_arr(i,j,k-1);
-
44  amrex::Real qc_lo = cell_data(i,j,k-1,RhoQ2_comp) /r0_arr(i,j,k-1);
-
45  amrex::Real qt_lo = qv_lo + qc_lo;
-
46  amrex::Real theta_v_lo = theta_d_lo * (1.0 - (1.0 - rv_over_rd)*qt_lo - rv_over_rd*qc_lo);
-
47 
-
48  amrex::Real theta_d_hi = cell_data(i,j,k,RhoTheta_comp)/r0_arr(i,j,k);
-
49  amrex::Real qv_hi = cell_data(i,j,k,RhoQ1_comp) /r0_arr(i,j,k);
-
50  amrex::Real qc_hi = cell_data(i,j,k,RhoQ2_comp) /r0_arr(i,j,k);
-
51  amrex::Real qt_hi = qv_hi + qc_hi;
-
52  amrex::Real theta_v_hi = theta_d_hi * (1.0 - (1.0 - rv_over_rd)*qt_hi - rv_over_rd*qc_hi);
-
53 
-
54  amrex::Real theta_v_wface = amrex::Real(0.5) * (theta_v_lo + theta_v_hi);
+
27 AMREX_GPU_DEVICE
+
28 AMREX_FORCE_INLINE
+
29 amrex::Real
+
30 buoyancy_moist_anelastic (int& i, int& j, int& k,
+
31  amrex::Real const& grav_gpu,
+
32  amrex::Real const& rv_over_rd,
+
33  const amrex::Array4<const amrex::Real>& r0_arr,
+
34  const amrex::Array4<const amrex::Real>& th0_arr,
+
35  const amrex::Array4<const amrex::Real>& cell_data)
+
36 {
+
37  amrex::Real theta_d_lo = cell_data(i,j,k-1,RhoTheta_comp)/r0_arr(i,j,k-1);
+
38  amrex::Real qv_lo = cell_data(i,j,k-1,RhoQ1_comp) /r0_arr(i,j,k-1);
+
39  amrex::Real qc_lo = cell_data(i,j,k-1,RhoQ2_comp) /r0_arr(i,j,k-1);
+
40  amrex::Real qt_lo = qv_lo + qc_lo;
+
41  amrex::Real theta_v_lo = theta_d_lo * (1.0 - (1.0 - rv_over_rd)*qt_lo - rv_over_rd*qc_lo);
+
42 
+
43  amrex::Real theta_d_hi = cell_data(i,j,k,RhoTheta_comp)/r0_arr(i,j,k);
+
44  amrex::Real qv_hi = cell_data(i,j,k,RhoQ1_comp) /r0_arr(i,j,k);
+
45  amrex::Real qc_hi = cell_data(i,j,k,RhoQ2_comp) /r0_arr(i,j,k);
+
46  amrex::Real qt_hi = qv_hi + qc_hi;
+
47  amrex::Real theta_v_hi = theta_d_hi * (1.0 - (1.0 - rv_over_rd)*qt_hi - rv_over_rd*qc_hi);
+
48 
+
49  amrex::Real theta_v_wface = amrex::Real(0.5) * (theta_v_lo + theta_v_hi);
+
50  amrex::Real theta_v0_wface = amrex::Real(0.5) * (th0_arr(i,j,k) + th0_arr(i,j,k-1));
+
51  amrex::Real rho0_wface = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
52 
+
53  return (-rho0_wface * grav_gpu * (theta_v_wface - theta_v0_wface) / theta_v0_wface);
+
54 }
55 
-
56  amrex::Real theta_v_0_lo = th0_arr(i,j,k-1) * (1.0 - (1.0 - rv_over_rd)*qt_lo - rv_over_rd*qc_lo);
-
57  amrex::Real theta_v_0_hi = th0_arr(i,j,k ) * (1.0 - (1.0 - rv_over_rd)*qt_hi - rv_over_rd*qc_hi);
-
58 
-
59  amrex::Real theta_v_0_wface = amrex::Real(0.5) * (theta_v_0_lo + theta_v_0_hi);
-
60 
-
61  amrex::Real rho0_wface = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
-
62 
-
63  return (-rho0_wface * grav_gpu * (theta_v_wface - theta_v_0_wface) / theta_v_0_wface);
-
64 }
-
65 
-
66 AMREX_GPU_DEVICE
-
67 AMREX_FORCE_INLINE
-
68 amrex::Real
-
69 buoyancy_dry_default (int& i, int& j, int& k,
-
70  amrex::Real const& grav_gpu,
-
71  amrex::Real const& rd_over_cp,
-
72  const amrex::Array4<const amrex::Real>& r0_arr,
-
73  const amrex::Array4<const amrex::Real>& p0_arr,
-
74  const amrex::Array4<const amrex::Real>& th0_arr,
-
75  const amrex::Array4<const amrex::Real>& cell_data)
-
76 {
-
77  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
-
78  amrex::Real t_hi = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp), cell_data(i,j,k ,RhoTheta_comp));
-
79  amrex::Real qplus = (t_hi-t0_hi)/t0_hi;
-
80 
-
81  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), th0_arr(i,j,k-1), rd_over_cp);
-
82  amrex::Real t_lo = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp), cell_data(i,j,k-1,RhoTheta_comp));
-
83  amrex::Real qminus = (t_lo-t0_lo)/t0_lo;
-
84 
-
85  amrex::Real r0_q_avg = amrex::Real(0.5) * (r0_arr(i,j,k) * qplus + r0_arr(i,j,k-1) * qminus);
-
86  return (-r0_q_avg * grav_gpu);
-
87 }
-
88 
-
89 AMREX_GPU_DEVICE
-
90 AMREX_FORCE_INLINE
-
91 amrex::Real
-
92 buoyancy_rhopert (int& i, int& j, int& k,
-
93  const int& n_qstate,
-
94  amrex::Real const& grav_gpu,
-
95  const amrex::Array4<const amrex::Real>& r0_arr,
-
96  const amrex::Array4<const amrex::Real>& cell_data)
-
97 {
-
98  amrex::Real rhop_hi = cell_data(i,j,k ,Rho_comp) - r0_arr(i,j,k );
-
99  amrex::Real rhop_lo = cell_data(i,j,k-1,Rho_comp) - r0_arr(i,j,k-1);
-
100  for (int q_offset(0); q_offset<n_qstate; ++q_offset) {
-
101  rhop_hi += cell_data(i,j,k ,RhoQ1_comp+q_offset);
-
102  rhop_lo += cell_data(i,j,k-1,RhoQ1_comp+q_offset);
-
103  }
-
104  return( grav_gpu * amrex::Real(0.5) * ( rhop_hi + rhop_lo ) );
-
105 }
-
106 
-
107 
-
108 AMREX_GPU_DEVICE
-
109 AMREX_FORCE_INLINE
-
110 amrex::Real
-
111 buoyancy_type2 (int& i, int& j, int& k,
-
112  const int& n_qstate,
-
113  amrex::Real const& grav_gpu,
-
114  amrex::Real* rho_d_ptr,
-
115  amrex::Real* theta_d_ptr,
-
116  amrex::Real* qv_d_ptr,
-
117  amrex::Real* qc_d_ptr,
-
118  amrex::Real* qp_d_ptr,
-
119  const amrex::Array4<const amrex::Real>& cell_prim,
-
120  const amrex::Array4<const amrex::Real>& cell_data)
-
121 {
-
122  amrex::Real tempp1d = getTgivenRandRTh(rho_d_ptr[k ], rho_d_ptr[k ]*theta_d_ptr[k ], qv_d_ptr[k ]);
-
123  amrex::Real tempm1d = getTgivenRandRTh(rho_d_ptr[k-1], rho_d_ptr[k-1]*theta_d_ptr[k-1], qv_d_ptr[k-1]);
-
124 
-
125  amrex::Real tempp3d = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp),
-
126  cell_data(i,j,k ,RhoTheta_comp),
-
127  cell_data(i,j,k ,RhoQ1_comp)/cell_data(i,j,k ,Rho_comp));
-
128  amrex::Real tempm3d = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp),
-
129  cell_data(i,j,k-1,RhoTheta_comp),
-
130  cell_data(i,j,k-1,RhoQ1_comp)/cell_data(i,j,k-1,Rho_comp));
-
131 
-
132  amrex::Real qv_plus = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
-
133  amrex::Real qv_minus = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
-
134 
-
135  amrex::Real qc_plus = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
-
136  amrex::Real qc_minus = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
-
137 
-
138  amrex::Real qp_plus = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
-
139  amrex::Real qp_minus = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
-
140 
-
141  amrex::Real qplus = 0.61 * ( qv_plus - qv_d_ptr[k] ) -
-
142  ( qc_plus - qc_d_ptr[k] +
-
143  qp_plus - qp_d_ptr[k] )
-
144  + (tempp3d-tempp1d)/tempp1d*(amrex::Real(1.0) + amrex::Real(0.61)*qv_d_ptr[k]-qc_d_ptr[k]-qp_d_ptr[k]);
-
145 
-
146  amrex::Real qminus = 0.61 * ( qv_minus - qv_d_ptr[k-1] ) -
-
147  ( qc_minus - qc_d_ptr[k-1] +
-
148  qp_minus - qp_d_ptr[k-1] )
-
149  + (tempm3d-tempm1d)/tempm1d*(amrex::Real(1.0) + amrex::Real(0.61)*qv_d_ptr[k-1]-qc_d_ptr[k-1]-qp_d_ptr[k-1]);
+
56 AMREX_GPU_DEVICE
+
57 AMREX_FORCE_INLINE
+
58 amrex::Real
+
59 buoyancy_rhopert (int& i, int& j, int& k,
+
60  const int& n_qstate,
+
61  amrex::Real const& grav_gpu,
+
62  const amrex::Array4<const amrex::Real>& r0_arr,
+
63  const amrex::Array4<const amrex::Real>& cell_data)
+
64 {
+
65  amrex::Real rhop_hi = cell_data(i,j,k ,Rho_comp) - r0_arr(i,j,k );
+
66  amrex::Real rhop_lo = cell_data(i,j,k-1,Rho_comp) - r0_arr(i,j,k-1);
+
67  for (int q_offset(0); q_offset<n_qstate; ++q_offset) {
+
68  rhop_hi += cell_data(i,j,k ,RhoQ1_comp+q_offset);
+
69  rhop_lo += cell_data(i,j,k-1,RhoQ1_comp+q_offset);
+
70  }
+
71  return( grav_gpu * amrex::Real(0.5) * ( rhop_hi + rhop_lo ) );
+
72 }
+
73 
+
74 AMREX_GPU_DEVICE
+
75 AMREX_FORCE_INLINE
+
76 amrex::Real
+
77 buoyancy_dry_Tpert (int& i, int& j, int& k,
+
78  amrex::Real const& grav_gpu,
+
79  amrex::Real const& rd_over_cp,
+
80  const amrex::Array4<const amrex::Real>& r0_arr,
+
81  const amrex::Array4<const amrex::Real>& p0_arr,
+
82  const amrex::Array4<const amrex::Real>& th0_arr,
+
83  const amrex::Array4<const amrex::Real>& cell_data)
+
84 {
+
85  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
+
86  amrex::Real t_hi = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp), cell_data(i,j,k ,RhoTheta_comp));
+
87 
+
88  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), th0_arr(i,j,k-1), rd_over_cp);
+
89  amrex::Real t_lo = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp), cell_data(i,j,k-1,RhoTheta_comp));
+
90 
+
91  amrex::Real tprime_hi = (t_hi-t0_hi)/t0_hi;
+
92  amrex::Real tprime_lo = (t_lo-t0_lo)/t0_lo;
+
93 
+
94  amrex::Real tp_avg = amrex::Real(0.5) * (tprime_hi + tprime_lo);
+
95  amrex::Real r0_avg = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
96 
+
97  return ( -r0_avg * grav_gpu * tp_avg);
+
98 }
+
99 
+
100 AMREX_GPU_DEVICE
+
101 AMREX_FORCE_INLINE
+
102 amrex::Real
+
103 buoyancy_dry_Thpert (int& i, int& j, int& k,
+
104  amrex::Real const& grav_gpu,
+
105  const amrex::Array4<const amrex::Real>& r0_arr,
+
106  const amrex::Array4<const amrex::Real>& th0_arr,
+
107  const amrex::Array4<const amrex::Real>& cell_prim)
+
108 {
+
109  //
+
110  // TODO: we are currently using Theta_prime/Theta_0 to replace T_prime/T_0 - P_prime/P_0
+
111  // but I don't think that is quite right.
+
112  //
+
113  amrex::Real thetaprime_hi = (cell_prim(i,j,k ,PrimTheta_comp) - th0_arr(i,j,k )) / th0_arr(i,j,k );
+
114  amrex::Real thetaprime_lo = (cell_prim(i,j,k-1,PrimTheta_comp) - th0_arr(i,j,k-1)) / th0_arr(i,j,k-1);
+
115 
+
116  amrex::Real thp_avg = amrex::Real(0.5) * (thetaprime_hi + thetaprime_lo);
+
117  amrex::Real r0_avg = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
118 
+
119  return ( -r0_avg * grav_gpu * thp_avg);
+
120 }
+
121 
+
122 AMREX_GPU_DEVICE
+
123 AMREX_FORCE_INLINE
+
124 amrex::Real
+
125 buoyancy_moist_Tpert (int& i, int& j, int& k,
+
126  const int& n_qstate,
+
127  amrex::Real const& grav_gpu,
+
128  amrex::Real const& rd_over_cp,
+
129  const amrex::Array4<const amrex::Real>& r0_arr,
+
130  const amrex::Array4<const amrex::Real>& th0_arr,
+
131  const amrex::Array4<const amrex::Real>& p0_arr,
+
132  const amrex::Array4<const amrex::Real>& cell_prim,
+
133  const amrex::Array4<const amrex::Real>& cell_data)
+
134 {
+
135  //
+
136  // Note: this currently assumes the base state qv0 is identically zero
+
137  // TODO: generalize this to allow for moist base state
+
138  //
+
139  amrex::Real qv_hi = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
+
140  amrex::Real qv_lo = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
+
141 
+
142  amrex::Real qc_hi = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
+
143  amrex::Real qc_lo = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
+
144 
+
145  amrex::Real qp_hi = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
+
146  amrex::Real qp_lo = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
+
147 
+
148  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
+
149  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
150 
-
151  amrex::Real qavg = amrex::Real(0.5) * (qplus + qminus);
-
152  amrex::Real r0avg = amrex::Real(0.5) * (rho_d_ptr[k] + rho_d_ptr[k-1]);
+
151  amrex::Real t_hi = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp), cell_data(i,j,k ,RhoTheta_comp), qv_hi);
+
152  amrex::Real t_lo = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp), cell_data(i,j,k-1,RhoTheta_comp), qv_lo);
153 
-
154  return (-qavg * r0avg * grav_gpu);
-
155 }
+
154  amrex::Real q_hi = 0.61 * qv_hi - (qc_hi + qp_hi) + (t_hi-t0_hi)/t0_hi;
+
155  amrex::Real q_lo = 0.61 * qv_lo - (qc_lo + qp_lo) + (t_lo-t0_lo)/t0_lo;
156 
-
157 
-
158 AMREX_GPU_DEVICE
-
159 AMREX_FORCE_INLINE
-
160 amrex::Real
-
161 buoyancy_type3 (int& i, int& j, int& k,
-
162  const int& n_qstate,
-
163  amrex::Real const& grav_gpu,
-
164  amrex::Real* rho_d_ptr,
-
165  amrex::Real* theta_d_ptr,
-
166  amrex::Real* qv_d_ptr,
-
167  const amrex::Array4<const amrex::Real>& cell_prim,
-
168  const amrex::Array4<const amrex::Real>& cell_data)
-
169 {
-
170  amrex::Real tempp1d = getTgivenRandRTh(rho_d_ptr[k ], rho_d_ptr[k ]*theta_d_ptr[k ], qv_d_ptr[k ]);
-
171  amrex::Real tempm1d = getTgivenRandRTh(rho_d_ptr[k-1], rho_d_ptr[k-1]*theta_d_ptr[k-1], qv_d_ptr[k-1]);
-
172 
-
173  amrex::Real tempp3d = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp),
-
174  cell_data(i,j,k ,RhoTheta_comp),
-
175  cell_data(i,j,k ,RhoQ1_comp)/cell_data(i,j,k ,Rho_comp));
-
176  amrex::Real tempm3d = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp),
-
177  cell_data(i,j,k-1,RhoTheta_comp),
-
178  cell_data(i,j,k-1,RhoQ1_comp)/cell_data(i,j,k-1,Rho_comp));
+
157  amrex::Real qavg = amrex::Real(0.5) * (q_hi + q_lo);
+
158  amrex::Real r0avg = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
+
159 
+
160  return ( -r0avg * grav_gpu * qavg);
+
161 }
+
162 
+
163 AMREX_GPU_DEVICE
+
164 AMREX_FORCE_INLINE
+
165 amrex::Real
+
166 buoyancy_moist_Thpert (int& i, int& j, int& k,
+
167  const int& n_qstate,
+
168  amrex::Real const& grav_gpu,
+
169  const amrex::Array4<const amrex::Real>& r0_arr,
+
170  const amrex::Array4<const amrex::Real>& th0_arr,
+
171  const amrex::Array4<const amrex::Real>& cell_prim)
+
172 {
+
173  //
+
174  // Note: this currently assumes the base state qv0 is identically zero
+
175  // TODO: generalize this to allow for moist base state
+
176  //
+
177  amrex::Real qv_hi = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
+
178  amrex::Real qv_lo = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
179 
-
180  amrex::Real qv_plus = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
-
181  amrex::Real qv_minus = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
+
180  amrex::Real qc_hi = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
+
181  amrex::Real qc_lo = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
182 
-
183  amrex::Real qc_plus = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
-
184  amrex::Real qc_minus = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
+
183  amrex::Real qp_hi = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
+
184  amrex::Real qp_lo = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
185 
-
186  amrex::Real qp_plus = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
-
187  amrex::Real qp_minus = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
-
188 
-
189  amrex::Real qplus = 0.61 * qv_plus - (qc_plus + qp_plus) + (tempp3d-tempp1d)/tempp1d;
-
190 
-
191  amrex::Real qminus = 0.61 * qv_minus - (qc_minus + qp_minus) + (tempm3d-tempm1d)/tempm1d;
+
186  //
+
187  // TODO: we are currently using Theta_prime/Theta_0 to replace T_prime/T_0 - P_prime/P_0
+
188  // but I don't think that is quite right.
+
189  //
+
190  amrex::Real q_hi = amrex::Real(0.61) * qv_hi - (qc_hi + qp_hi)
+
191  + (cell_prim(i,j,k ,PrimTheta_comp) - th0_arr(i,j,k )) / th0_arr(i,j,k );
192 
-
193  amrex::Real qavg = amrex::Real(0.5) * (qplus + qminus);
-
194  amrex::Real r0avg = amrex::Real(0.5) * (rho_d_ptr[k] + rho_d_ptr[k-1]);
+
193  amrex::Real q_lo = amrex::Real(0.61) * qv_lo - (qc_lo + qp_lo)
+
194  + (cell_prim(i,j,k-1,PrimTheta_comp) - th0_arr(i,j,k-1)) / th0_arr(i,j,k-1);
195 
-
196  return ( -qavg * r0avg * grav_gpu );
-
197 }
+
196  amrex::Real qavg = amrex::Real(0.5) * (q_hi + q_lo);
+
197  amrex::Real r0avg = amrex::Real(0.5) * (r0_arr(i,j,k) + r0_arr(i,j,k-1));
198 
-
199 
-
200 AMREX_GPU_DEVICE
-
201 AMREX_FORCE_INLINE
-
202 amrex::Real
-
203 buoyancy_type4 (int& i, int& j, int& k,
-
204  const int& n_qstate,
-
205  amrex::Real const& grav_gpu,
-
206  amrex::Real* rho_d_ptr,
-
207  amrex::Real* theta_d_ptr,
-
208  amrex::Real* qv_d_ptr,
-
209  amrex::Real* qc_d_ptr,
-
210  amrex::Real* qp_d_ptr,
-
211  const amrex::Array4<const amrex::Real>& cell_prim,
-
212  const amrex::Array4<const amrex::Real>& cell_data)
-
213 {
-
214  amrex::Real qv_plus = (n_qstate >= 1) ? cell_prim(i,j,k ,PrimQ1_comp) : 0.0;
-
215  amrex::Real qv_minus = (n_qstate >= 1) ? cell_prim(i,j,k-1,PrimQ1_comp) : 0.0;
-
216 
-
217  amrex::Real qc_plus = (n_qstate >= 2) ? cell_prim(i,j,k ,PrimQ2_comp) : 0.0;
-
218  amrex::Real qc_minus = (n_qstate >= 2) ? cell_prim(i,j,k-1,PrimQ2_comp) : 0.0;
-
219 
-
220  amrex::Real qp_plus = (n_qstate >= 3) ? cell_prim(i,j,k ,PrimQ3_comp) : 0.0;
-
221  amrex::Real qp_minus = (n_qstate >= 3) ? cell_prim(i,j,k-1,PrimQ3_comp) : 0.0;
-
222 
-
223  amrex::Real qplus = amrex::Real(0.61) * ( qv_plus - qv_d_ptr[k] ) -
-
224  ( qc_plus - qc_d_ptr[k] +
-
225  qp_plus - qp_d_ptr[k] )
-
226  + (cell_data(i,j,k ,RhoTheta_comp)/cell_data(i,j,k ,Rho_comp) - theta_d_ptr[k ])/theta_d_ptr[k ];
-
227 
-
228  amrex::Real qminus = amrex::Real(0.61) * ( qv_minus - qv_d_ptr[k-1] ) -
-
229  ( qc_minus - qc_d_ptr[k-1] +
-
230  qp_minus - qp_d_ptr[k-1] )
-
231  + (cell_data(i,j,k-1,RhoTheta_comp)/cell_data(i,j,k-1,Rho_comp) - theta_d_ptr[k-1])/theta_d_ptr[k-1];
-
232 
-
233  amrex::Real qavg = amrex::Real(0.5) * (qplus + qminus);
-
234  amrex::Real r0avg = amrex::Real(0.5) * (rho_d_ptr[k] + rho_d_ptr[k-1]);
-
235 
-
236  return (-qavg * r0avg * grav_gpu);
-
237 }
-
238 
-
239 // **************************************************************************************
-
240 // Routines below this line are not currently used
-
241 // **************************************************************************************
-
242 
-
243 AMREX_GPU_DEVICE
-
244 AMREX_FORCE_INLINE
-
245 amrex::Real
-
246 buoyancy_dry_Tpert (int& i, int& j, int& k,
-
247  amrex::Real const& grav_gpu,
-
248  amrex::Real const& rd_over_cp,
-
249  const amrex::Array4<const amrex::Real>& r0_arr,
-
250  const amrex::Array4<const amrex::Real>& p0_arr,
-
251  const amrex::Array4<const amrex::Real>& th0_arr,
-
252  const amrex::Array4<const amrex::Real>& cell_data)
-
253 {
-
254  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), th0_arr(i,j,k), rd_over_cp);
-
255  amrex::Real t_hi = getTgivenRandRTh(cell_data(i,j,k ,Rho_comp), cell_data(i,j,k ,RhoTheta_comp));
-
256  amrex::Real qplus = (t_hi-t0_hi)/t0_hi;
-
257 
-
258  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), th0_arr(i,j,k-1), rd_over_cp);
-
259  amrex::Real t_lo = getTgivenRandRTh(cell_data(i,j,k-1,Rho_comp), cell_data(i,j,k-1,RhoTheta_comp));
-
260  amrex::Real qminus = (t_lo-t0_lo)/t0_lo;
-
261 
-
262  amrex::Real r0_q_avg = amrex::Real(0.5) * (r0_arr(i,j,k) * qplus + r0_arr(i,j,k-1) * qminus);
-
263  return (-r0_q_avg * grav_gpu);
-
264 }
-
265 
-
266 AMREX_GPU_DEVICE
-
267 AMREX_FORCE_INLINE
-
268 amrex::Real
-
269 buoyancy_dry_anelastic_T (int& i, int& j, int& k,
-
270  amrex::Real const& grav_gpu,
-
271  amrex::Real const& rd_over_cp,
-
272  const amrex::Array4<const amrex::Real>& r0_arr,
-
273  const amrex::Array4<const amrex::Real>& p0_arr,
-
274  const amrex::Array4<const amrex::Real>& cell_data)
-
275 {
-
276  amrex::Real rt0_hi = getRhoThetagivenP(p0_arr(i,j,k));
-
277  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), rt0_hi/r0_arr(i,j,k), rd_over_cp);
-
278  amrex::Real t_hi = getTgivenPandTh(p0_arr(i,j,k), cell_data(i,j,k,RhoTheta_comp)/r0_arr(i,j,k), rd_over_cp);
-
279  amrex::Real qplus = (t_hi-t0_hi)/t0_hi;
-
280 
-
281  amrex::Real rt0_lo = getRhoThetagivenP(p0_arr(i,j,k-1));
-
282  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), rt0_lo/r0_arr(i,j,k-1), rd_over_cp);
-
283  amrex::Real t_lo = getTgivenPandTh(p0_arr(i,j,k-1), cell_data(i,j,k-1,RhoTheta_comp)/r0_arr(i,j,k-1), rd_over_cp);
-
284  amrex::Real qminus = (t_lo-t0_lo)/t0_lo;
-
285 
-
286  amrex::Real r0_q_avg = amrex::Real(0.5) * (r0_arr(i,j,k) * qplus + r0_arr(i,j,k-1) * qminus);
-
287  return (-r0_q_avg * grav_gpu);
-
288 }
-
289 
-
290 #endif
+
199  return ( -r0avg * grav_gpu * qavg);
+
200 }
+
201 
+
202 // **************************************************************************************
+
203 // Routines below this line are not currently used
+
204 // **************************************************************************************
+
205 
+
206 AMREX_GPU_DEVICE
+
207 AMREX_FORCE_INLINE
+
208 amrex::Real
+
209 buoyancy_dry_anelastic_T (int& i, int& j, int& k,
+
210  amrex::Real const& grav_gpu,
+
211  amrex::Real const& rd_over_cp,
+
212  const amrex::Array4<const amrex::Real>& r0_arr,
+
213  const amrex::Array4<const amrex::Real>& p0_arr,
+
214  const amrex::Array4<const amrex::Real>& cell_data)
+
215 {
+
216  amrex::Real rt0_hi = getRhoThetagivenP(p0_arr(i,j,k));
+
217  amrex::Real t0_hi = getTgivenPandTh(p0_arr(i,j,k), rt0_hi/r0_arr(i,j,k), rd_over_cp);
+
218  amrex::Real t_hi = getTgivenPandTh(p0_arr(i,j,k), cell_data(i,j,k,RhoTheta_comp)/r0_arr(i,j,k), rd_over_cp);
+
219  amrex::Real q_hi = (t_hi-t0_hi)/t0_hi;
+
220 
+
221  amrex::Real rt0_lo = getRhoThetagivenP(p0_arr(i,j,k-1));
+
222  amrex::Real t0_lo = getTgivenPandTh(p0_arr(i,j,k-1), rt0_lo/r0_arr(i,j,k-1), rd_over_cp);
+
223  amrex::Real t_lo = getTgivenPandTh(p0_arr(i,j,k-1), cell_data(i,j,k-1,RhoTheta_comp)/r0_arr(i,j,k-1), rd_over_cp);
+
224  amrex::Real q_lo = (t_lo-t0_lo)/t0_lo;
+
225 
+
226  amrex::Real r0_q_avg = amrex::Real(0.5) * (r0_arr(i,j,k) * q_hi + r0_arr(i,j,k-1) * q_lo);
+
227  return (-r0_q_avg * grav_gpu);
+
228 }
+
229 
+
230 #endif
ERF_Constants.H
ERF_EOS.H
getRhoThetagivenP
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getRhoThetagivenP(const amrex::Real p, const amrex::Real qv=0.0)
Definition: ERF_EOS.H:175
@@ -386,17 +326,17 @@
Rho_comp
#define Rho_comp
Definition: ERF_IndexDefines.H:36
RhoTheta_comp
#define RhoTheta_comp
Definition: ERF_IndexDefines.H:37
RhoQ2_comp
#define RhoQ2_comp
Definition: ERF_IndexDefines.H:43
+
PrimTheta_comp
#define PrimTheta_comp
Definition: ERF_IndexDefines.H:50
RhoQ1_comp
#define RhoQ1_comp
Definition: ERF_IndexDefines.H:42
PrimQ3_comp
#define PrimQ3_comp
Definition: ERF_IndexDefines.H:55
-
buoyancy_type2
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type2(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real *rho_d_ptr, amrex::Real *theta_d_ptr, amrex::Real *qv_d_ptr, amrex::Real *qc_d_ptr, amrex::Real *qp_d_ptr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:111
-
buoyancy_rhopert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_rhopert(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:92
-
buoyancy_type3
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type3(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real *rho_d_ptr, amrex::Real *theta_d_ptr, amrex::Real *qv_d_ptr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:161
+
buoyancy_rhopert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_rhopert(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:59
buoyancy_dry_anelastic
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_anelastic(int &i, int &j, int &k, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:10
-
buoyancy_type4
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type4(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real *rho_d_ptr, amrex::Real *theta_d_ptr, amrex::Real *qv_d_ptr, amrex::Real *qc_d_ptr, amrex::Real *qp_d_ptr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:203
-
buoyancy_dry_Tpert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_Tpert(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:246
-
buoyancy_moist_anelastic
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_anelastic(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rv_over_rd, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:35
-
buoyancy_dry_anelastic_T
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_anelastic_T(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:269
-
buoyancy_dry_default
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_default(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:69
+
buoyancy_dry_Thpert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_Thpert(int &i, int &j, int &k, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_prim)
Definition: ERF_buoyancy_utils.H:103
+
buoyancy_dry_Tpert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_Tpert(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:77
+
buoyancy_moist_anelastic
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_anelastic(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rv_over_rd, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:30
+
buoyancy_moist_Thpert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_Thpert(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_prim)
Definition: ERF_buoyancy_utils.H:166
+
buoyancy_moist_Tpert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_Tpert(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:125
+
buoyancy_dry_anelastic_T
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_anelastic_T(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:209
diff --git a/ERF__make__buoyancy_8cpp.html b/ERF__make__buoyancy_8cpp.html index ac893d3d5f..50b43bd68f 100644 --- a/ERF__make__buoyancy_8cpp.html +++ b/ERF__make__buoyancy_8cpp.html @@ -243,295 +243,153 @@

53  MultiFab p0 (base_state, make_alias, BaseState::p0_comp , 1);
54  MultiFab th0(base_state, make_alias, BaseState::th0_comp, 1);
55 
-
56  if (anelastic == 1) {
-
57 #ifdef _OPENMP
-
58 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
-
59 #endif
-
60  for ( MFIter mfi(buoyancy,TilingIfNotGPU()); mfi.isValid(); ++mfi)
-
61  {
-
62  Box tbz = mfi.tilebox();
-
63 
-
64  // We don't compute a source term for z-momentum on the bottom or top boundary
-
65  if (tbz.smallEnd(2) == klo) tbz.growLo(2,-1);
-
66  if (tbz.bigEnd(2) == khi) tbz.growHi(2,-1);
-
67 
-
68  const Array4<const Real> & cell_data = S_data[IntVars::cons].array(mfi);
-
69  const Array4< Real> & buoyancy_fab = buoyancy.array(mfi);
+
56 #ifdef _OPENMP
+
57 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
+
58 #endif
+
59  for ( MFIter mfi(buoyancy,TilingIfNotGPU()); mfi.isValid(); ++mfi)
+
60  {
+
61  Box tbz = mfi.tilebox();
+
62 
+
63  // We don't compute a source term for z-momentum on the bottom or top boundary
+
64  if (tbz.smallEnd(2) == klo) tbz.growLo(2,-1);
+
65  if (tbz.bigEnd(2) == khi) tbz.growHi(2,-1);
+
66 
+
67  const Array4<const Real> & cell_data = S_data[IntVars::cons].array(mfi);
+
68  const Array4<const Real> & cell_prim = S_prim.array(mfi);
+
69  const Array4< Real> & buoyancy_fab = buoyancy.array(mfi);
70 
-
71  // Base state density and pressure
-
72  const Array4<const Real>& r0_arr = r0.const_array(mfi);
-
73  const Array4<const Real>& th0_arr = th0.const_array(mfi);
-
74 
-
75  if (solverChoice.moisture_type == MoistureType::None) {
-
76  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
-
77  {
-
78  //
-
79  // Return -rho0 g (thetaprime / theta0)
-
80  //
-
81  buoyancy_fab(i, j, k) = buoyancy_dry_anelastic(i,j,k,
-
82  grav_gpu[2],
-
83  r0_arr,th0_arr,cell_data);
-
84  });
-
85  } else {
-
86  // NOTE: For decomposition in the vertical direction, klo may not
-
87  // reside in the valid box and this call will yield an out
-
88  // of bounds error since it depends upon the surface theta_l
-
89  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
-
90  {
-
91  //
-
92  // Return -rho0 g (thetaprime / theta0)
-
93  //
-
94  buoyancy_fab(i, j, k) = buoyancy_moist_anelastic(i,j,k,
-
95  grav_gpu[2],rv_over_rd,
-
96  r0_arr,th0_arr,cell_data);
-
97  });
-
98  }
-
99  } // mfi
-
100  }
-
101  else
-
102  {
-
103  // ******************************************************************************************
-
104  // Dry versions of buoyancy expressions (type 1 and type 2/3 -- types 2 and 3 are equivalent)
-
105  // ******************************************************************************************
-
106  if (solverChoice.moisture_type == MoistureType::None)
-
107  {
-
108  int n_q_dry = 0;
-
109  if (solverChoice.buoyancy_type == 1) {
-
110 #ifdef _OPENMP
-
111 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
-
112 #endif
-
113  for ( MFIter mfi(buoyancy,TilingIfNotGPU()); mfi.isValid(); ++mfi)
-
114  {
-
115  Box tbz = mfi.tilebox();
-
116 
-
117  // We don't compute a source term for z-momentum on the bottom or top domain boundary
-
118  if (tbz.smallEnd(2) == klo) tbz.growLo(2,-1);
-
119  if (tbz.bigEnd(2) == khi) tbz.growHi(2,-1);
-
120 
-
121  const Array4<const Real> & cell_data = S_data[IntVars::cons].array(mfi);
-
122  const Array4< Real> & buoyancy_fab = buoyancy.array(mfi);
-
123 
-
124  // Base state density
-
125  const Array4<const Real>& r0_arr = r0.const_array(mfi);
-
126 
-
127  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
-
128  {
-
129  buoyancy_fab(i, j, k) = buoyancy_rhopert(i,j,k,n_q_dry,grav_gpu[2],r0_arr,cell_data);
-
130  });
-
131  } // mfi
-
132 
-
133  }
-
134  else // (buoyancy_type != 1)
-
135  {
-
136  // We now use the base state rather than planar average because
-
137  // 1) we don't want to average over the limited region of the fine level if doing multilevel.
-
138  // 2) it's cheaper to use the base state than to compute the horizontal averages
-
139  // 3) when running in a smallish domain, the horizontal average may evolve over time,
-
140  // which is not necessarily the intended behavior
-
141  //
-
142 #ifdef _OPENMP
-
143 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
-
144 #endif
-
145  for ( MFIter mfi(buoyancy,TilingIfNotGPU()); mfi.isValid(); ++mfi)
-
146  {
-
147  Box tbz = mfi.tilebox();
-
148 
-
149  // We don't compute a source term for z-momentum on the bottom or top boundary
-
150  if (tbz.smallEnd(2) == klo) tbz.growLo(2,-1);
-
151  if (tbz.bigEnd(2) == khi) tbz.growHi(2,-1);
-
152 
-
153  // Base state density and pressure
-
154  const Array4<const Real>& r0_arr = r0.const_array(mfi);
-
155  const Array4<const Real>& p0_arr = p0.const_array(mfi);
-
156  const Array4<const Real>& th0_arr = th0.const_array(mfi);
-
157 
-
158  const Array4<const Real> & cell_data = S_data[IntVars::cons].array(mfi);
-
159  const Array4< Real> & buoyancy_fab = buoyancy.array(mfi);
-
160 
-
161  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
-
162  {
-
163  buoyancy_fab(i, j, k) = buoyancy_dry_default(i,j,k,
-
164  grav_gpu[2],rd_over_cp,
-
165  r0_arr,p0_arr,th0_arr,cell_data);
-
166  });
-
167  } // mfi
-
168  } // buoyancy_type
-
169  } // moisture type
-
170  else
-
171  {
-
172  // ******************************************************************************************
-
173  // Moist versions of buoyancy expressions
-
174  // ******************************************************************************************
-
175 
-
176  if ( (solverChoice.moisture_type == MoistureType::Kessler_NoRain) ||
-
177  (solverChoice.moisture_type == MoistureType::SAM) ||
-
178  (solverChoice.moisture_type == MoistureType::SAM_NoPrecip_NoIce) )
-
179  {
-
180  AMREX_ALWAYS_ASSERT(solverChoice.buoyancy_type == 1);
-
181  }
-
182 
-
183  if (solverChoice.buoyancy_type == 1) {
-
184 
-
185 #ifdef _OPENMP
-
186 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
-
187 #endif
-
188  for ( MFIter mfi(buoyancy,TilingIfNotGPU()); mfi.isValid(); ++mfi)
-
189  {
-
190  Box tbz = mfi.tilebox();
-
191 
-
192  // We don't compute a source term for z-momentum on the bottom or top domain boundary
-
193  if (tbz.smallEnd(2) == klo) tbz.growLo(2,-1);
-
194  if (tbz.bigEnd(2) == khi) tbz.growHi(2,-1);
-
195 
-
196  const Array4<const Real> & cell_data = S_data[IntVars::cons].array(mfi);
-
197  const Array4< Real> & buoyancy_fab = buoyancy.array(mfi);
-
198 
-
199  // Base state density
-
200  const Array4<const Real>& r0_arr = r0.const_array(mfi);
-
201 
-
202  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
-
203  {
-
204  buoyancy_fab(i, j, k) = buoyancy_rhopert(i,j,k,n_qstate,
-
205  grav_gpu[2],r0_arr,cell_data);
-
206  });
-
207  } // mfi
-
208 
-
209  } else {
-
210 
-
211  PlaneAverage state_ave(&(S_data[IntVars::cons]), geom, solverChoice.ave_plane);
-
212  PlaneAverage prim_ave(&S_prim , geom, solverChoice.ave_plane);
-
213 
-
214  // Compute horizontal averages of all components of each field
-
215  state_ave.compute_averages(ZDir(), state_ave.field());
-
216  prim_ave.compute_averages(ZDir(), prim_ave.field());
-
217 
-
218  int ncell = state_ave.ncell_line();
-
219 
-
220  Gpu::HostVector <Real> rho_h(ncell), theta_h(ncell);
-
221  Gpu::DeviceVector<Real> rho_d(ncell), theta_d(ncell);
-
222 
-
223  state_ave.line_average(Rho_comp, rho_h);
-
224  Gpu::copyAsync(Gpu::hostToDevice, rho_h.begin(), rho_h.end(), rho_d.begin());
-
225 
-
226  prim_ave.line_average(PrimTheta_comp, theta_h);
-
227  Gpu::copyAsync(Gpu::hostToDevice, theta_h.begin(), theta_h.end(), theta_d.begin());
-
228 
-
229  Real* rho_d_ptr = rho_d.data();
-
230  Real* theta_d_ptr = theta_d.data();
-
231 
-
232  // Average valid moisture vars
-
233  Gpu::HostVector <Real> qv_h(ncell) , qc_h(ncell) , qp_h(ncell);
-
234  Gpu::DeviceVector<Real> qv_d(ncell,0.0), qc_d(ncell,0.0), qp_d(ncell,0.0);
-
235  if (n_qstate >=1) {
-
236  prim_ave.line_average(PrimQ1_comp, qv_h);
-
237  Gpu::copyAsync(Gpu::hostToDevice, qv_h.begin(), qv_h.end(), qv_d.begin());
-
238  }
-
239  if (n_qstate >=2) {
-
240  prim_ave.line_average(PrimQ2_comp, qc_h);
-
241  Gpu::copyAsync(Gpu::hostToDevice, qc_h.begin(), qc_h.end(), qc_d.begin());
-
242  }
-
243  if (n_qstate >=3) {
-
244  prim_ave.line_average(PrimQ3_comp, qp_h);
-
245  Gpu::copyAsync(Gpu::hostToDevice, qp_h.begin(), qp_h.end(), qp_d.begin());
-
246  }
-
247  Real* qv_d_ptr = qv_d.data();
-
248  Real* qc_d_ptr = qc_d.data();
-
249  Real* qp_d_ptr = qp_d.data();
-
250 
-
251  if (solverChoice.buoyancy_type == 2 || solverChoice.buoyancy_type == 4 ) {
-
252 
-
253 #ifdef _OPENMP
-
254 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
-
255 #endif
-
256  for ( MFIter mfi(buoyancy,TilingIfNotGPU()); mfi.isValid(); ++mfi)
-
257  {
-
258  Box tbz = mfi.tilebox();
-
259 
-
260  // We don't compute a source term for z-momentum on the bottom or top domain boundary
-
261  if (tbz.smallEnd(2) == klo) tbz.growLo(2,-1);
-
262  if (tbz.bigEnd(2) == khi) tbz.growHi(2,-1);
-
263 
-
264  const Array4< Real> & buoyancy_fab = buoyancy.array(mfi);
-
265 
-
266  const Array4<const Real> & cell_data = S_data[IntVars::cons].array(mfi);
-
267  const Array4<const Real> & cell_prim = S_prim.array(mfi);
-
268 
-
269  // TODO: ice has not been dealt with (q1=qv, q2=qv, q3=qp)
-
270  if (solverChoice.buoyancy_type == 2) {
-
271  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
-
272  {
-
273  buoyancy_fab(i, j, k) = buoyancy_type2(i,j,k,n_qstate,grav_gpu[2],
-
274  rho_d_ptr,theta_d_ptr,
-
275  qv_d_ptr,qc_d_ptr,qp_d_ptr,
-
276  cell_prim,cell_data);
-
277  });
-
278  } else {
-
279  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
-
280  {
-
281  buoyancy_fab(i, j, k) = buoyancy_type4(i,j,k,n_qstate,grav_gpu[2],
-
282  rho_d_ptr,theta_d_ptr,
-
283  qv_d_ptr,qc_d_ptr,qp_d_ptr,
-
284  cell_prim,cell_data);
-
285  });
-
286  }
-
287  } // mfi
-
288 
-
289  } else if (solverChoice.buoyancy_type == 3) {
-
290 #ifdef _OPENMP
-
291 #pragma omp parallel if (amrex::Gpu::notInLaunchRegion())
-
292 #endif
-
293  for ( MFIter mfi(buoyancy,TilingIfNotGPU()); mfi.isValid(); ++mfi)
-
294  {
-
295  Box tbz = mfi.tilebox();
-
296 
-
297  // We don't compute a source term for z-momentum on the bottom or top domain boundary
-
298  if (tbz.smallEnd(2) == klo) tbz.growLo(2,-1);
-
299  if (tbz.bigEnd(2) == khi) tbz.growHi(2,-1);
-
300 
-
301  const Array4< Real> & buoyancy_fab = buoyancy.array(mfi);
-
302 
-
303  const Array4<const Real> & cell_data = S_data[IntVars::cons].array(mfi);
-
304  const Array4<const Real> & cell_prim = S_prim.array(mfi);
-
305 
-
306  // TODO: ice has not been dealt with (q1=qv, q2=qv, q3=qp)
-
307 
-
308  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
-
309  {
-
310  buoyancy_fab(i, j, k) = buoyancy_type3(i,j,k,n_qstate,grav_gpu[2],
-
311  rho_d_ptr,theta_d_ptr,qv_d_ptr,
-
312  cell_prim,cell_data);
-
313  });
-
314  } // mfi
-
315  } // buoyancy_type
-
316  } // not buoyancy_type == 1
-
317  } // has moisture
-
318  } // anelastic?
-
319 }
+
71  // Base state density and pressure
+
72  const Array4<const Real>& r0_arr = r0.const_array(mfi);
+
73  const Array4<const Real>& p0_arr = p0.const_array(mfi);
+
74  const Array4<const Real>& th0_arr = th0.const_array(mfi);
+
75 
+
76  if ( anelastic && (solverChoice.moisture_type == MoistureType::None) )
+
77  {
+
78  // ******************************************************************************************
+
79  // Dry anelastic
+
80  // ******************************************************************************************
+
81  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
+
82  {
+
83  //
+
84  // Return -rho0 g (thetaprime / theta0)
+
85  //
+
86  buoyancy_fab(i, j, k) = buoyancy_dry_anelastic(i,j,k,grav_gpu[2],
+
87  r0_arr,th0_arr,cell_data);
+
88  });
+
89  }
+
90  else if ( anelastic && (solverChoice.moisture_type != MoistureType::None) )
+
91  {
+
92  // ******************************************************************************************
+
93  // Moist anelastic
+
94  // ******************************************************************************************
+
95  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
+
96  {
+
97  //
+
98  // Return -rho0 g (thetaprime / theta0)
+
99  //
+
100  buoyancy_fab(i, j, k) = buoyancy_moist_anelastic(i,j,k,grav_gpu[2],rv_over_rd,
+
101  r0_arr,th0_arr,cell_data);
+
102  });
+
103  }
+
104  else if ( !anelastic && (solverChoice.moisture_type == MoistureType::None) )
+
105  {
+
106  // ******************************************************************************************
+
107  // Dry compressible
+
108  // ******************************************************************************************
+
109  int n_q_dry = 0;
+
110  if (solverChoice.buoyancy_type == 1) {
+
111 
+
112  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
+
113  {
+
114  //
+
115  // Return -rho0 g (thetaprime / theta0)
+
116  //
+
117  buoyancy_fab(i, j, k) = buoyancy_rhopert(i,j,k,n_q_dry,grav_gpu[2],
+
118  r0_arr,cell_data);
+
119  });
+
120  }
+
121  else if (solverChoice.buoyancy_type == 2 || solverChoice.buoyancy_type == 3)
+
122  {
+
123  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
+
124  {
+
125  //
+
126  // Return -rho0 g (Tprime / T0)
+
127  //
+
128  buoyancy_fab(i, j, k) = buoyancy_dry_Tpert(i,j,k,grav_gpu[2],rd_over_cp,
+
129  r0_arr,p0_arr,th0_arr,cell_data);
+
130  });
+
131  }
+
132  else if (solverChoice.buoyancy_type == 4)
+
133  {
+
134  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
+
135  {
+
136  //
+
137  // Return -rho0 g (Theta_prime / Theta_0)
+
138  //
+
139  buoyancy_fab(i, j, k) = buoyancy_dry_Thpert(i,j,k,grav_gpu[2],
+
140  r0_arr,th0_arr,cell_data);
+
141  });
+
142  } // buoyancy_type for dry compressible
+
143  }
+
144  else // if ( !anelastic && (solverChoice.moisture_type != MoistureType::None) )
+
145  {
+
146  // ******************************************************************************************
+
147  // Moist compressible
+
148  // ******************************************************************************************
+
149 
+
150  if ( (solverChoice.moisture_type == MoistureType::Kessler_NoRain) ||
+
151  (solverChoice.moisture_type == MoistureType::SAM) ||
+
152  (solverChoice.moisture_type == MoistureType::SAM_NoPrecip_NoIce) )
+
153  {
+
154  AMREX_ALWAYS_ASSERT(solverChoice.buoyancy_type == 1);
+
155  }
+
156 
+
157  if (solverChoice.buoyancy_type == 1)
+
158  {
+
159  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
+
160  {
+
161  buoyancy_fab(i, j, k) = buoyancy_rhopert(i,j,k,n_qstate,grav_gpu[2],
+
162  r0_arr,cell_data);
+
163  });
+
164  }
+
165  else if (solverChoice.buoyancy_type == 2 || solverChoice.buoyancy_type == 3)
+
166  {
+
167 
+
168  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
+
169  {
+
170  buoyancy_fab(i, j, k) = buoyancy_moist_Tpert(i,j,k,n_qstate,grav_gpu[2],rd_over_cp,
+
171  r0_arr,th0_arr,p0_arr,
+
172  cell_prim,cell_data);
+
173  });
+
174  }
+
175  else if (solverChoice.buoyancy_type == 4)
+
176  {
+
177  ParallelFor(tbz, [=] AMREX_GPU_DEVICE (int i, int j, int k)
+
178  {
+
179  buoyancy_fab(i, j, k) = buoyancy_moist_Thpert(i,j,k,n_qstate,grav_gpu[2],
+
180  r0_arr,th0_arr,cell_prim);
+
181  });
+
182  }
+
183  } // moist compressible
+
184  } // mfi
+
185 }
R_v
constexpr amrex::Real R_v
Definition: ERF_Constants.H:11
R_d
constexpr amrex::Real R_d
Definition: ERF_Constants.H:10
-
ZDir
DirectionSelector< 2 > ZDir
Definition: ERF_DirectionSelector.H:38
-
PrimQ1_comp
#define PrimQ1_comp
Definition: ERF_IndexDefines.H:53
-
PrimQ2_comp
#define PrimQ2_comp
Definition: ERF_IndexDefines.H:54
-
Rho_comp
#define Rho_comp
Definition: ERF_IndexDefines.H:36
-
PrimTheta_comp
#define PrimTheta_comp
Definition: ERF_IndexDefines.H:50
-
PrimQ3_comp
#define PrimQ3_comp
Definition: ERF_IndexDefines.H:55
-
buoyancy_type2
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type2(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real *rho_d_ptr, amrex::Real *theta_d_ptr, amrex::Real *qv_d_ptr, amrex::Real *qc_d_ptr, amrex::Real *qp_d_ptr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:111
-
buoyancy_rhopert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_rhopert(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:92
-
buoyancy_type3
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type3(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real *rho_d_ptr, amrex::Real *theta_d_ptr, amrex::Real *qv_d_ptr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:161
+
buoyancy_rhopert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_rhopert(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:59
buoyancy_dry_anelastic
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_anelastic(int &i, int &j, int &k, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:10
-
buoyancy_type4
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type4(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real *rho_d_ptr, amrex::Real *theta_d_ptr, amrex::Real *qv_d_ptr, amrex::Real *qc_d_ptr, amrex::Real *qp_d_ptr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:203
-
buoyancy_moist_anelastic
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_anelastic(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rv_over_rd, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:35
-
buoyancy_dry_default
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_default(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:69
-
PlaneAverage
Definition: ERF_PlaneAverage.H:14
+
buoyancy_dry_Thpert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_Thpert(int &i, int &j, int &k, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_prim)
Definition: ERF_buoyancy_utils.H:103
+
buoyancy_dry_Tpert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_dry_Tpert(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:77
+
buoyancy_moist_anelastic
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_anelastic(int &i, int &j, int &k, amrex::Real const &grav_gpu, amrex::Real const &rv_over_rd, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:30
+
buoyancy_moist_Thpert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_Thpert(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &cell_prim)
Definition: ERF_buoyancy_utils.H:166
+
buoyancy_moist_Tpert
AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_moist_Tpert(int &i, int &j, int &k, const int &n_qstate, amrex::Real const &grav_gpu, amrex::Real const &rd_over_cp, const amrex::Array4< const amrex::Real > &r0_arr, const amrex::Array4< const amrex::Real > &th0_arr, const amrex::Array4< const amrex::Real > &p0_arr, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< const amrex::Real > &cell_data)
Definition: ERF_buoyancy_utils.H:125
BaseState::p0_comp
@ p0_comp
Definition: ERF_IndexDefines.H:64
BaseState::th0_comp
@ th0_comp
Definition: ERF_IndexDefines.H:66
BaseState::r0_comp
@ r0_comp
Definition: ERF_IndexDefines.H:63
IntVars::cons
@ cons
Definition: ERF_IndexDefines.H:139
-
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:572
-
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:570
-
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
-
SolverChoice::buoyancy_type
int buoyancy_type
Definition: ERF_DataStruct.H:551
-
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:628
+
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:573
+
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:571
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618
+
SolverChoice::buoyancy_type
int buoyancy_type
Definition: ERF_DataStruct.H:552

Referenced by make_mom_sources().

@@ -539,20 +397,16 @@

- + - - - - - - - - - - - - + + + + + + + +

diff --git a/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.map b/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.map index 2edd37a605..89c61c33e2 100644 --- a/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.map +++ b/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.map @@ -1,16 +1,12 @@ - + - - - - - - - - - - - - + + + + + + + + diff --git a/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.md5 b/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.md5 index 065e389e5f..d5867c630b 100644 --- a/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.md5 +++ b/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.md5 @@ -1 +1 @@ -78a911cd975faa1431639743d7d0bf5b \ No newline at end of file +8a24c5fc07fdfa20ceba866bf1103b82 \ No newline at end of file diff --git a/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.png b/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.png index b429e057e4..aaec019f12 100644 Binary files a/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.png and b/ERF__make__buoyancy_8cpp_a8088738885b030abe3022ba02503db7c_cgraph.png differ diff --git a/ERF__make__mom__sources_8cpp.html b/ERF__make__mom__sources_8cpp.html index 3ecb8447b4..f0e4d3d6b6 100644 --- a/ERF__make__mom__sources_8cpp.html +++ b/ERF__make__mom__sources_8cpp.html @@ -853,51 +853,51 @@

InputSoundingData::input_sounding_time
amrex::Vector< amrex::Real > input_sounding_time
Definition: ERF_InputSoundingData.H:315

InputSoundingData::tau_nudging
amrex::Real tau_nudging
Definition: ERF_InputSoundingData.H:312
InputSoundingData::U_inp_sound_d
amrex::Vector< amrex::Gpu::DeviceVector< amrex::Real > > U_inp_sound_d
Definition: ERF_InputSoundingData.H:326
-
SolverChoice::coriolis_factor
amrex::Real coriolis_factor
Definition: ERF_DataStruct.H:582
-
SolverChoice::rayleigh_damp_V
bool rayleigh_damp_V
Definition: ERF_DataStruct.H:559
-
SolverChoice::rayleigh_zdamp
amrex::Real rayleigh_zdamp
Definition: ERF_DataStruct.H:563
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SolverChoice::cosphi
amrex::Real cosphi
Definition: ERF_DataStruct.H:583
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SolverChoice::abl_geo_forcing
amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_geo_forcing
Definition: ERF_DataStruct.H:624
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SolverChoice::custom_w_subsidence
bool custom_w_subsidence
Definition: ERF_DataStruct.H:589
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SolverChoice::nudging_from_input_sounding
bool nudging_from_input_sounding
Definition: ERF_DataStruct.H:595
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SolverChoice::rayleigh_damp_U
bool rayleigh_damp_U
Definition: ERF_DataStruct.H:558
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SolverChoice::rayleigh_ztop
amrex::Real rayleigh_ztop
Definition: ERF_DataStruct.H:564
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SolverChoice::sinphi
amrex::Real sinphi
Definition: ERF_DataStruct.H:584
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SolverChoice::have_geo_wind_profile
bool have_geo_wind_profile
Definition: ERF_DataStruct.H:626
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SolverChoice::do_forest
bool do_forest
Definition: ERF_DataStruct.H:649
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SolverChoice::use_coriolis
bool use_coriolis
Definition: ERF_DataStruct.H:555
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SolverChoice::use_NumDiff
bool use_NumDiff
Definition: ERF_DataStruct.H:610
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SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:542
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SolverChoice::custom_forcing_prim_vars
bool custom_forcing_prim_vars
Definition: ERF_DataStruct.H:591
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SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:523
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SolverChoice::rayleigh_damp_W
bool rayleigh_damp_W
Definition: ERF_DataStruct.H:560
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SolverChoice::spongeChoice
SpongeChoice spongeChoice
Definition: ERF_DataStruct.H:533
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SolverChoice::rayleigh_dampcoef
amrex::Real rayleigh_dampcoef
Definition: ERF_DataStruct.H:562
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SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:628
+
SolverChoice::coriolis_factor
amrex::Real coriolis_factor
Definition: ERF_DataStruct.H:583
+
SolverChoice::rayleigh_damp_V
bool rayleigh_damp_V
Definition: ERF_DataStruct.H:560
+
SolverChoice::rayleigh_zdamp
amrex::Real rayleigh_zdamp
Definition: ERF_DataStruct.H:564
+
SolverChoice::cosphi
amrex::Real cosphi
Definition: ERF_DataStruct.H:584
+
SolverChoice::abl_geo_forcing
amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_geo_forcing
Definition: ERF_DataStruct.H:625
+
SolverChoice::custom_w_subsidence
bool custom_w_subsidence
Definition: ERF_DataStruct.H:590
+
SolverChoice::nudging_from_input_sounding
bool nudging_from_input_sounding
Definition: ERF_DataStruct.H:596
+
SolverChoice::rayleigh_damp_U
bool rayleigh_damp_U
Definition: ERF_DataStruct.H:559
+
SolverChoice::rayleigh_ztop
amrex::Real rayleigh_ztop
Definition: ERF_DataStruct.H:565
+
SolverChoice::sinphi
amrex::Real sinphi
Definition: ERF_DataStruct.H:585
+
SolverChoice::have_geo_wind_profile
bool have_geo_wind_profile
Definition: ERF_DataStruct.H:627
+
SolverChoice::do_forest
bool do_forest
Definition: ERF_DataStruct.H:650
+
SolverChoice::use_coriolis
bool use_coriolis
Definition: ERF_DataStruct.H:556
+
SolverChoice::use_NumDiff
bool use_NumDiff
Definition: ERF_DataStruct.H:611
+
SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:543
+
SolverChoice::custom_forcing_prim_vars
bool custom_forcing_prim_vars
Definition: ERF_DataStruct.H:592
+
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:524
+
SolverChoice::rayleigh_damp_W
bool rayleigh_damp_W
Definition: ERF_DataStruct.H:561
+
SolverChoice::spongeChoice
SpongeChoice spongeChoice
Definition: ERF_DataStruct.H:534
+
SolverChoice::rayleigh_dampcoef
amrex::Real rayleigh_dampcoef
Definition: ERF_DataStruct.H:563
+
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:629
SpongeChoice::sponge_type
std::string sponge_type
Definition: ERF_SpongeStruct.H:61
Here is the call graph for this function:
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diff --git a/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.map b/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.map index 638cb62633..835fa42262 100644 --- a/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.map +++ b/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.map @@ -1,20 +1,20 @@ - + - - - - - - - - - - - - - - - + + + + + + + + + + + + + + + diff --git a/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.md5 b/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.md5 index 5a683c6b95..acc2701033 100644 --- a/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.md5 +++ b/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.md5 @@ -1 +1 @@ -975988cb904202c87f135cb8f4fd8142 \ No newline at end of file +0aeffac8ce41a904446b7a9b4fa50b51 \ No newline at end of file diff --git a/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.png b/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.png index be3ba361d7..bf33e24060 100644 Binary files a/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.png and b/ERF__make__mom__sources_8cpp_aa780c98d6544f91efc38dfbf3c2f7211_cgraph.png differ diff --git a/ERF__make__sources_8cpp.html b/ERF__make__sources_8cpp.html index ec04ae0f34..7326723bb9 100644 --- a/ERF__make__sources_8cpp.html +++ b/ERF__make__sources_8cpp.html @@ -689,23 +689,23 @@

InputSoundingData::theta_inp_sound_d
amrex::Vector< amrex::Gpu::DeviceVector< amrex::Real > > theta_inp_sound_d
Definition: ERF_InputSoundingData.H:326
InputSoundingData::input_sounding_time
amrex::Vector< amrex::Real > input_sounding_time
Definition: ERF_InputSoundingData.H:315
InputSoundingData::tau_nudging
amrex::Real tau_nudging
Definition: ERF_InputSoundingData.H:312
-
SolverChoice::rayleigh_damp_T
bool rayleigh_damp_T
Definition: ERF_DataStruct.H:561
-
SolverChoice::rayleigh_zdamp
amrex::Real rayleigh_zdamp
Definition: ERF_DataStruct.H:563
-
SolverChoice::custom_rhotheta_forcing
bool custom_rhotheta_forcing
Definition: ERF_DataStruct.H:587
-
SolverChoice::custom_w_subsidence
bool custom_w_subsidence
Definition: ERF_DataStruct.H:589
-
SolverChoice::nudging_from_input_sounding
bool nudging_from_input_sounding
Definition: ERF_DataStruct.H:595
-
SolverChoice::rayleigh_ztop
amrex::Real rayleigh_ztop
Definition: ERF_DataStruct.H:564
-
SolverChoice::NumDiffCoeff
amrex::Real NumDiffCoeff
Definition: ERF_DataStruct.H:611
-
SolverChoice::use_NumDiff
bool use_NumDiff
Definition: ERF_DataStruct.H:610
-
SolverChoice::custom_moisture_forcing
bool custom_moisture_forcing
Definition: ERF_DataStruct.H:588
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SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:534
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SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
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SolverChoice::custom_forcing_prim_vars
bool custom_forcing_prim_vars
Definition: ERF_DataStruct.H:591
-
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:523
-
SolverChoice::pert_type
PerturbationType pert_type
Definition: ERF_DataStruct.H:607
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SolverChoice::spongeChoice
SpongeChoice spongeChoice
Definition: ERF_DataStruct.H:533
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SolverChoice::rayleigh_dampcoef
amrex::Real rayleigh_dampcoef
Definition: ERF_DataStruct.H:562
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SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:628
+
SolverChoice::rayleigh_damp_T
bool rayleigh_damp_T
Definition: ERF_DataStruct.H:562
+
SolverChoice::rayleigh_zdamp
amrex::Real rayleigh_zdamp
Definition: ERF_DataStruct.H:564
+
SolverChoice::custom_rhotheta_forcing
bool custom_rhotheta_forcing
Definition: ERF_DataStruct.H:588
+
SolverChoice::custom_w_subsidence
bool custom_w_subsidence
Definition: ERF_DataStruct.H:590
+
SolverChoice::nudging_from_input_sounding
bool nudging_from_input_sounding
Definition: ERF_DataStruct.H:596
+
SolverChoice::rayleigh_ztop
amrex::Real rayleigh_ztop
Definition: ERF_DataStruct.H:565
+
SolverChoice::NumDiffCoeff
amrex::Real NumDiffCoeff
Definition: ERF_DataStruct.H:612
+
SolverChoice::use_NumDiff
bool use_NumDiff
Definition: ERF_DataStruct.H:611
+
SolverChoice::custom_moisture_forcing
bool custom_moisture_forcing
Definition: ERF_DataStruct.H:589
+
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:535
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618
+
SolverChoice::custom_forcing_prim_vars
bool custom_forcing_prim_vars
Definition: ERF_DataStruct.H:592
+
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:524
+
SolverChoice::pert_type
PerturbationType pert_type
Definition: ERF_DataStruct.H:608
+
SolverChoice::spongeChoice
SpongeChoice spongeChoice
Definition: ERF_DataStruct.H:534
+
SolverChoice::rayleigh_dampcoef
amrex::Real rayleigh_dampcoef
Definition: ERF_DataStruct.H:563
+
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:629
SpongeChoice::sponge_type
std::string sponge_type
Definition: ERF_SpongeStruct.H:61
TurbChoice
Definition: ERF_TurbStruct.H:29
TurbChoice::pbl_type
PBLType pbl_type
Definition: ERF_TurbStruct.H:192
diff --git a/ERF__make__tau__terms_8cpp.html b/ERF__make__tau__terms_8cpp.html index 9d05126d8c..231d97dac8 100644 --- a/ERF__make__tau__terms_8cpp.html +++ b/ERF__make__tau__terms_8cpp.html @@ -758,11 +758,11 @@

DiffChoice::rho0_trans
amrex::Real rho0_trans
Definition: ERF_DiffStruct.H:83
DiffChoice::dynamicViscosity
amrex::Real dynamicViscosity
Definition: ERF_DiffStruct.H:88
DiffChoice::molec_diff_type
MolecDiffType molec_diff_type
Definition: ERF_DiffStruct.H:76
-
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:598
-
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:532
-
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:534
-
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:523
-
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:601
+
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:599
+
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:533
+
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:535
+
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:524
+
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:602
TurbChoice
Definition: ERF_TurbStruct.H:29
TurbChoice::pbl_type
PBLType pbl_type
Definition: ERF_TurbStruct.H:192
TurbChoice::les_type
LESType les_type
Definition: ERF_TurbStruct.H:169
diff --git a/ERF__prob__common_8H_source.html b/ERF__prob__common_8H_source.html index 10ccb0fe13..60d42552f2 100644 --- a/ERF__prob__common_8H_source.html +++ b/ERF__prob__common_8H_source.html @@ -611,7 +611,7 @@
ProbParmDefaults::T_0
amrex::Real T_0
Definition: ERF_prob_common.H:16
ProbParmDefaults::rho_0
amrex::Real rho_0
Definition: ERF_prob_common.H:15
SolverChoice
Definition: ERF_DataStruct.H:78
-
SolverChoice::set_flat_terrain_flag
static void set_flat_terrain_flag()
Definition: ERF_DataStruct.H:526
+
SolverChoice::set_flat_terrain_flag
static void set_flat_terrain_flag()
Definition: ERF_DataStruct.H:527
diff --git a/ERF__slow__rhs__post_8cpp.html b/ERF__slow__rhs__post_8cpp.html index 33a6f2f762..fcce66d3cd 100644 --- a/ERF__slow__rhs__post_8cpp.html +++ b/ERF__slow__rhs__post_8cpp.html @@ -932,17 +932,17 @@

AdvChoice::dryscal_horiz_upw_frac
amrex::Real dryscal_horiz_upw_frac
Definition: ERF_AdvStruct.H:293
DiffChoice
Definition: ERF_DiffStruct.H:19
DiffChoice::molec_diff_type
MolecDiffType molec_diff_type
Definition: ERF_DiffStruct.H:76
-
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:598
-
SolverChoice::use_mono_adv
bool use_mono_adv
Definition: ERF_DataStruct.H:614
-
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:532
-
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:570
-
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:534
-
SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:542
-
SolverChoice::advChoice
AdvChoice advChoice
Definition: ERF_DataStruct.H:531
-
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
-
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:523
-
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:601
-
SolverChoice::coupling_type
CouplingType coupling_type
Definition: ERF_DataStruct.H:616
+
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:599
+
SolverChoice::use_mono_adv
bool use_mono_adv
Definition: ERF_DataStruct.H:615
+
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:533
+
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:571
+
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:535
+
SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:543
+
SolverChoice::advChoice
AdvChoice advChoice
Definition: ERF_DataStruct.H:532
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618
+
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:524
+
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:602
+
SolverChoice::coupling_type
CouplingType coupling_type
Definition: ERF_DataStruct.H:617
TurbChoice
Definition: ERF_TurbStruct.H:29
TurbChoice::pbl_type
PBLType pbl_type
Definition: ERF_TurbStruct.H:192
TurbChoice::use_KE
bool use_KE
Definition: ERF_TurbStruct.H:206
diff --git a/ERF__slow__rhs__pre_8cpp.html b/ERF__slow__rhs__pre_8cpp.html index 99caa82521..81ba2feac8 100644 --- a/ERF__slow__rhs__pre_8cpp.html +++ b/ERF__slow__rhs__pre_8cpp.html @@ -1276,19 +1276,19 @@

AdvChoice::dycore_horiz_upw_frac
amrex::Real dycore_horiz_upw_frac
Definition: ERF_AdvStruct.H:291
DiffChoice
Definition: ERF_DiffStruct.H:19
DiffChoice::molec_diff_type
MolecDiffType molec_diff_type
Definition: ERF_DiffStruct.H:76
-
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:598
-
SolverChoice::use_mono_adv
bool use_mono_adv
Definition: ERF_DataStruct.H:614
-
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:532
-
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:570
-
SolverChoice::abl_pressure_grad
amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_pressure_grad
Definition: ERF_DataStruct.H:623
-
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:534
-
SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:542
-
SolverChoice::constant_density
int constant_density
Definition: ERF_DataStruct.H:544
-
SolverChoice::advChoice
AdvChoice advChoice
Definition: ERF_DataStruct.H:531
-
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
-
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:523
-
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:601
-
SolverChoice::coupling_type
CouplingType coupling_type
Definition: ERF_DataStruct.H:616
+
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:599
+
SolverChoice::use_mono_adv
bool use_mono_adv
Definition: ERF_DataStruct.H:615
+
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:533
+
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:571
+
SolverChoice::abl_pressure_grad
amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_pressure_grad
Definition: ERF_DataStruct.H:624
+
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:535
+
SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:543
+
SolverChoice::constant_density
int constant_density
Definition: ERF_DataStruct.H:545
+
SolverChoice::advChoice
AdvChoice advChoice
Definition: ERF_DataStruct.H:532
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618
+
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:524
+
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:602
+
SolverChoice::coupling_type
CouplingType coupling_type
Definition: ERF_DataStruct.H:617
TurbChoice
Definition: ERF_TurbStruct.H:29
TurbChoice::pbl_type
PBLType pbl_type
Definition: ERF_TurbStruct.H:192
TurbChoice::les_type
LESType les_type
Definition: ERF_TurbStruct.H:169
diff --git a/classERF.html b/classERF.html index 259d25487a..7145bd57d3 100644 --- a/classERF.html +++ b/classERF.html @@ -1385,12 +1385,12 @@

Vars::cons
@ cons
Definition: ERF_IndexDefines.H:129
Vars::zvel
@ zvel
Definition: ERF_IndexDefines.H:132
Vars::yvel
@ yvel
Definition: ERF_IndexDefines.H:131
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SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:639
-
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:633
-
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
-
SolverChoice::pert_type
PerturbationType pert_type
Definition: ERF_DataStruct.H:607
-
SolverChoice::windfarm_type
WindFarmType windfarm_type
Definition: ERF_DataStruct.H:618
-
SolverChoice::time_avg_vel
bool time_avg_vel
Definition: ERF_DataStruct.H:604
+
SolverChoice::RhoQr_comp
int RhoQr_comp
Definition: ERF_DataStruct.H:640
+
SolverChoice::RhoQv_comp
int RhoQv_comp
Definition: ERF_DataStruct.H:634
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618
+
SolverChoice::pert_type
PerturbationType pert_type
Definition: ERF_DataStruct.H:608
+
SolverChoice::windfarm_type
WindFarmType windfarm_type
Definition: ERF_DataStruct.H:619
+
SolverChoice::time_avg_vel
bool time_avg_vel
Definition: ERF_DataStruct.H:605
TurbulentPerturbation::calc_tpi_update
void calc_tpi_update(const int lev, const amrex::Real dt, amrex::MultiFab &mf_xvel, amrex::MultiFab &mf_yvel, amrex::MultiFab &mf_cons)
Definition: ERF_TurbPertStruct.H:184
TurbulentPerturbation::pb_cell
amrex::MultiFab pb_cell
Definition: ERF_TurbPertStruct.H:536
TurbulentPerturbation::apply_tpi
void apply_tpi(const int &lev, const amrex::Box &vbx, const int &comp, const amrex::IndexType &m_ixtype, const amrex::Array4< amrex::Real > &src_arr, const amrex::Array4< amrex::Real const > &pert_cell)
Definition: ERF_TurbPertStruct.H:245
@@ -1809,9 +1809,9 @@

ERF_TI_no_substep_fun.H
no_substep_fun
auto no_substep_fun
Definition: ERF_TI_no_substep_fun.H:4
ERF_TI_slow_rhs_fun.H
-
slow_rhs_fun_inc
auto slow_rhs_fun_inc
Definition: ERF_TI_slow_rhs_fun.H:390
+
slow_rhs_fun_inc
auto slow_rhs_fun_inc
Definition: ERF_TI_slow_rhs_fun.H:392
slow_rhs_fun_pre
auto slow_rhs_fun_pre
Definition: ERF_TI_slow_rhs_fun.H:6
-
slow_rhs_fun_post
auto slow_rhs_fun_post
Definition: ERF_TI_slow_rhs_fun.H:296
+
slow_rhs_fun_post
auto slow_rhs_fun_post
Definition: ERF_TI_slow_rhs_fun.H:298
ERF_TI_substep_fun.H
fast_rhs_fun
auto fast_rhs_fun
Definition: ERF_TI_substep_fun.H:4
ERF_TI_utils.H
@@ -1869,22 +1869,22 @@

BaseState::r0_comp
@ r0_comp
Definition: ERF_IndexDefines.H:63
DiffChoice
Definition: ERF_DiffStruct.H:19
DiffChoice::molec_diff_type
MolecDiffType molec_diff_type
Definition: ERF_DiffStruct.H:76
-
SolverChoice::rayleigh_damp_T
bool rayleigh_damp_T
Definition: ERF_DataStruct.H:561
-
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:598
-
SolverChoice::rayleigh_damp_V
bool rayleigh_damp_V
Definition: ERF_DataStruct.H:559
-
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:532
-
SolverChoice::custom_rhotheta_forcing
bool custom_rhotheta_forcing
Definition: ERF_DataStruct.H:587
-
SolverChoice::custom_w_subsidence
bool custom_w_subsidence
Definition: ERF_DataStruct.H:589
-
SolverChoice::rayleigh_damp_U
bool rayleigh_damp_U
Definition: ERF_DataStruct.H:558
-
SolverChoice::custom_geostrophic_profile
bool custom_geostrophic_profile
Definition: ERF_DataStruct.H:590
-
SolverChoice::substepping_type
amrex::Vector< SubsteppingType > substepping_type
Definition: ERF_DataStruct.H:541
-
SolverChoice::use_NumDiff
bool use_NumDiff
Definition: ERF_DataStruct.H:610
-
SolverChoice::custom_moisture_forcing
bool custom_moisture_forcing
Definition: ERF_DataStruct.H:588
-
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:534
-
SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:542
-
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:523
-
SolverChoice::rayleigh_damp_W
bool rayleigh_damp_W
Definition: ERF_DataStruct.H:560
-
SolverChoice::spongeChoice
SpongeChoice spongeChoice
Definition: ERF_DataStruct.H:533
+
SolverChoice::rayleigh_damp_T
bool rayleigh_damp_T
Definition: ERF_DataStruct.H:562
+
SolverChoice::use_explicit_most
bool use_explicit_most
Definition: ERF_DataStruct.H:599
+
SolverChoice::rayleigh_damp_V
bool rayleigh_damp_V
Definition: ERF_DataStruct.H:560
+
SolverChoice::diffChoice
DiffChoice diffChoice
Definition: ERF_DataStruct.H:533
+
SolverChoice::custom_rhotheta_forcing
bool custom_rhotheta_forcing
Definition: ERF_DataStruct.H:588
+
SolverChoice::custom_w_subsidence
bool custom_w_subsidence
Definition: ERF_DataStruct.H:590
+
SolverChoice::rayleigh_damp_U
bool rayleigh_damp_U
Definition: ERF_DataStruct.H:559
+
SolverChoice::custom_geostrophic_profile
bool custom_geostrophic_profile
Definition: ERF_DataStruct.H:591
+
SolverChoice::substepping_type
amrex::Vector< SubsteppingType > substepping_type
Definition: ERF_DataStruct.H:542
+
SolverChoice::use_NumDiff
bool use_NumDiff
Definition: ERF_DataStruct.H:611
+
SolverChoice::custom_moisture_forcing
bool custom_moisture_forcing
Definition: ERF_DataStruct.H:589
+
SolverChoice::turbChoice
amrex::Vector< TurbChoice > turbChoice
Definition: ERF_DataStruct.H:535
+
SolverChoice::anelastic
amrex::Vector< int > anelastic
Definition: ERF_DataStruct.H:543
+
SolverChoice::terrain_type
static TerrainType terrain_type
Definition: ERF_DataStruct.H:524
+
SolverChoice::rayleigh_damp_W
bool rayleigh_damp_W
Definition: ERF_DataStruct.H:561
+
SolverChoice::spongeChoice
SpongeChoice spongeChoice
Definition: ERF_DataStruct.H:534
SpongeChoice
Definition: ERF_SpongeStruct.H:15
SpongeChoice::sponge_type
std::string sponge_type
Definition: ERF_SpongeStruct.H:61
TurbChoice
Definition: ERF_TurbStruct.H:29
@@ -1970,7 +1970,7 @@

12 }
ERF::lsm
LandSurface lsm
Definition: ERF.H:777
LandSurface::Advance
void Advance(const int &lev, const amrex::Real &dt_advance)
Definition: ERF_LandSurface.H:51
-
SolverChoice::lsm_type
LandSurfaceType lsm_type
Definition: ERF_DataStruct.H:620
+
SolverChoice::lsm_type
LandSurfaceType lsm_type
Definition: ERF_DataStruct.H:621
@@ -2158,7 +2158,7 @@

31  }
32 }
ERF::AverageDownTo
void AverageDownTo(int crse_lev, int scomp, int ncomp)
Definition: ERF_AverageDown.cpp:36
-
SolverChoice::coupling_type
CouplingType coupling_type
Definition: ERF_DataStruct.H:616
+
SolverChoice::coupling_type
CouplingType coupling_type
Definition: ERF_DataStruct.H:617
@@ -2660,7 +2660,7 @@

ERF::stretched_dz_d
amrex::Vector< amrex::Gpu::DeviceVector< amrex::Real > > stretched_dz_d
Definition: ERF.H:847
ERF::ax
amrex::Vector< std::unique_ptr< amrex::MultiFab > > ax
Definition: ERF.H:824
ERF::ay
amrex::Vector< std::unique_ptr< amrex::MultiFab > > ay
Definition: ERF.H:825
-
SolverChoice::terrain_is_flat
static bool terrain_is_flat
Definition: ERF_DataStruct.H:520
+
SolverChoice::terrain_is_flat
static bool terrain_is_flat
Definition: ERF_DataStruct.H:521
@@ -4621,8 +4621,8 @@

getRhoThetagivenP
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getRhoThetagivenP(const amrex::Real p, const amrex::Real qv=0.0)
Definition: ERF_EOS.H:175
getExnergivenP
AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real getExnergivenP(const amrex::Real P, const amrex::Real rdOcp)
Definition: ERF_EOS.H:144
MicVar_Kess::pres
@ pres
Definition: ERF_Kessler.H:33
-
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:572
-
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:570
+
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:573
+
SolverChoice::gravity
amrex::Real gravity
Definition: ERF_DataStruct.H:571
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@@ -4953,9 +4953,9 @@

ERF::initializeMicrophysics
void initializeMicrophysics(const int &)
Definition: ERF.cpp:1214

LandSurface::ReSize
void ReSize(const int &nlev)
Definition: ERF_LandSurface.H:23
amrex::buildInfoGetGitHash
const char * buildInfoGetGitHash(int i)
-
SolverChoice::dz0
amrex::Real dz0
Definition: ERF_DataStruct.H:577
-
SolverChoice::grid_stretching_ratio
amrex::Real grid_stretching_ratio
Definition: ERF_DataStruct.H:575
-
SolverChoice::zsurf
amrex::Real zsurf
Definition: ERF_DataStruct.H:576
+
SolverChoice::dz0
amrex::Real dz0
Definition: ERF_DataStruct.H:578
+
SolverChoice::grid_stretching_ratio
amrex::Real grid_stretching_ratio
Definition: ERF_DataStruct.H:576
+
SolverChoice::zsurf
amrex::Real zsurf
Definition: ERF_DataStruct.H:577
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@@ -5347,7 +5347,7 @@

ERF::fixed_fast_dt
amrex::Vector< amrex::Real > fixed_fast_dt
Definition: ERF.H:915

ERF::cfl
static amrex::Real cfl
Definition: ERF.H:909
MicVar_Kess::rho
@ rho
Definition: ERF_Kessler.H:30
-
SolverChoice::force_stage1_single_substep
int force_stage1_single_substep
Definition: ERF_DataStruct.H:539
+
SolverChoice::force_stage1_single_substep
int force_stage1_single_substep
Definition: ERF_DataStruct.H:540
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AdvChoice::zero_yflux
amrex::Vector< amrex::IntVect > zero_yflux
Definition: ERF_AdvStruct.H:300

AdvChoice::zero_xflux
amrex::Vector< amrex::IntVect > zero_xflux
Definition: ERF_AdvStruct.H:299
AdvChoice::zero_zflux
amrex::Vector< amrex::IntVect > zero_zflux
Definition: ERF_AdvStruct.H:301
-
SolverChoice::advChoice
AdvChoice advChoice
Definition: ERF_DataStruct.H:531
+
SolverChoice::advChoice
AdvChoice advChoice
Definition: ERF_DataStruct.H:532
@@ -8209,7 +8209,7 @@

ERF::make_physbcs
void make_physbcs(int lev)
Definition: ERF_make_new_arrays.cpp:550
ERF::init_uniform
void init_uniform(int lev)
Definition: ERF_init_uniform.cpp:17
ERF::turbPert_amplitude
void turbPert_amplitude(const int lev)
Definition: ERF_init_TurbPert.cpp:44
-
SolverChoice::use_gravity
bool use_gravity
Definition: ERF_DataStruct.H:554
+
SolverChoice::use_gravity
bool use_gravity
Definition: ERF_DataStruct.H:555
@@ -8613,7 +8613,7 @@

NDRY
#define NDRY
Definition: ERF_IndexDefines.H:13
ERF::ComputeGhostCells
static AMREX_FORCE_INLINE int ComputeGhostCells(const AdvChoice &advChoice, bool use_num_diff)
Definition: ERF.H:1144
BaseState::num_comps
@ num_comps
Definition: ERF_IndexDefines.H:67
-
SolverChoice::test_mapfactor
bool test_mapfactor
Definition: ERF_DataStruct.H:549
+
SolverChoice::test_mapfactor
bool test_mapfactor
Definition: ERF_DataStruct.H:550
TurbulentPerturbation::init_tpi
void init_tpi(const int lev, const amrex::IntVect &nx, const amrex::GpuArray< amrex::Real, 3 > dx, const amrex::BoxArray &ba, const amrex::DistributionMapping &dm, const int ngrow_state)
Definition: ERF_TurbPertStruct.H:29
@@ -9409,10 +9409,10 @@

ERF::samplepoint
amrex::Vector< amrex::IntVect > samplepoint
Definition: ERF.H:1340
ERF::setRecordSamplePointInfo
void setRecordSamplePointInfo(int i, int lev, amrex::IntVect &cell, const std::string &filename)
Definition: ERF.H:1296
Microphysics::modelType
static MoistureModelType modelType(const MoistureType a_moisture_type)
query if a specified moisture model is Eulerian or Lagrangian
Definition: ERF_Microphysics.H:64
-
SolverChoice::have_geo_wind_profile
bool have_geo_wind_profile
Definition: ERF_DataStruct.H:626
-
SolverChoice::project_initial_velocity
bool project_initial_velocity
Definition: ERF_DataStruct.H:579
-
SolverChoice::abl_geo_wind_table
std::string abl_geo_wind_table
Definition: ERF_DataStruct.H:625
-
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:601
+
SolverChoice::have_geo_wind_profile
bool have_geo_wind_profile
Definition: ERF_DataStruct.H:627
+
SolverChoice::project_initial_velocity
bool project_initial_velocity
Definition: ERF_DataStruct.H:580
+
SolverChoice::abl_geo_wind_table
std::string abl_geo_wind_table
Definition: ERF_DataStruct.H:626
+
SolverChoice::use_rotate_most
bool use_rotate_most
Definition: ERF_DataStruct.H:602
TurbulentPerturbation::debug
void debug(amrex::Real)
Definition: ERF_TurbPertStruct.H:508
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@@ -9647,7 +9647,7 @@

127 }
ChopGrids2D
void ChopGrids2D(BoxArray &ba, const Box &domain, int target_size)
Definition: ERF_ChopGrids.cpp:21
ERF::erf_enforce_hse
void erf_enforce_hse(int lev, amrex::MultiFab &dens, amrex::MultiFab &pres, amrex::MultiFab &pi, amrex::MultiFab &th, std::unique_ptr< amrex::MultiFab > &z_cc)
Definition: ERF_init1d.cpp:149
-
SolverChoice::use_moist_background
bool use_moist_background
Definition: ERF_DataStruct.H:632
+
SolverChoice::use_moist_background
bool use_moist_background
Definition: ERF_DataStruct.H:633
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@@ -9904,8 +9904,8 @@

44  }

45 }
ERF::h_rayleigh_ptrs
amrex::Vector< amrex::Vector< amrex::Vector< amrex::Real > > > h_rayleigh_ptrs
Definition: ERF.H:1099
-
SolverChoice::rayleigh_zdamp
amrex::Real rayleigh_zdamp
Definition: ERF_DataStruct.H:563
-
SolverChoice::rayleigh_ztop
amrex::Real rayleigh_ztop
Definition: ERF_DataStruct.H:564
+
SolverChoice::rayleigh_zdamp
amrex::Real rayleigh_zdamp
Definition: ERF_DataStruct.H:564
+
SolverChoice::rayleigh_ztop
amrex::Real rayleigh_ztop
Definition: ERF_DataStruct.H:565
@@ -10495,7 +10495,7 @@

ERF::init_zphys
void init_zphys(int lev, amrex::Real time)
Definition: ERF_make_new_arrays.cpp:453
ERF::init_stuff
void init_stuff(int lev, const amrex::BoxArray &ba, const amrex::DistributionMapping &dm, amrex::Vector< amrex::MultiFab > &lev_new, amrex::Vector< amrex::MultiFab > &lev_old, amrex::MultiFab &tmp_base_state, std::unique_ptr< amrex::MultiFab > &tmp_zphys_nd)
Definition: ERF_make_new_arrays.cpp:23
ERF::Define_ERFFillPatchers
void Define_ERFFillPatchers(int lev)
Definition: ERF.cpp:1900
-
SolverChoice::do_forest
bool do_forest
Definition: ERF_DataStruct.H:649
+
SolverChoice::do_forest
bool do_forest
Definition: ERF_DataStruct.H:650
@@ -11890,7 +11890,7 @@

ERF::solve_with_mlmg
void solve_with_mlmg(int lev, amrex::Vector< amrex::MultiFab > &rhs, amrex::Vector< amrex::MultiFab > &p, amrex::Vector< amrex::Array< amrex::MultiFab, AMREX_SPACEDIM >> &fluxes)
Definition: ERF_solve_with_mlmg.cpp:40
ERF::solve_with_gmres
void solve_with_gmres(int lev, amrex::Vector< amrex::MultiFab > &rhs, amrex::Vector< amrex::MultiFab > &p, amrex::Array< amrex::MultiFab, AMREX_SPACEDIM > &fluxes)
Definition: ERF_solve_with_gmres.cpp:12
MicVar::omega
@ omega
Definition: ERF_SAM.H:49
-
SolverChoice::poisson_abstol
amrex::Real poisson_abstol
Definition: ERF_DataStruct.H:546
+
SolverChoice::poisson_abstol
amrex::Real poisson_abstol
Definition: ERF_DataStruct.H:547
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@@ -12159,8 +12159,8 @@

ERF::get_projection_bc
amrex::Array< amrex::LinOpBCType, AMREX_SPACEDIM > get_projection_bc(amrex::Orientation::Side side) const noexcept
Definition: ERF_solve_with_mlmg.cpp:17

ERF::projection_has_dirichlet
bool projection_has_dirichlet(amrex::Array< amrex::LinOpBCType, AMREX_SPACEDIM > bcs) const
Definition: ERF_PoissonSolve_tb.cpp:8
ERF::volWgtSumMF
amrex::Real volWgtSumMF(int lev, const amrex::MultiFab &mf, int comp, const amrex::MultiFab &mapfac, bool local, bool finemask)
Definition: ERF_WriteScalarProfiles.cpp:378
-
SolverChoice::poisson_reltol
amrex::Real poisson_reltol
Definition: ERF_DataStruct.H:547
-
SolverChoice::ncorr
int ncorr
Definition: ERF_DataStruct.H:545
+
SolverChoice::poisson_reltol
amrex::Real poisson_reltol
Definition: ERF_DataStruct.H:548
+
SolverChoice::ncorr
int ncorr
Definition: ERF_DataStruct.H:546
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@@ -12916,9 +12916,9 @@

NOAH
Definition: ERF_NOAH.H:20

NullSurf
Definition: ERF_NullSurf.H:8
SLM
Definition: ERF_SLM.H:26
-
SolverChoice::pp_prefix
std::string pp_prefix
Definition: ERF_DataStruct.H:537
+
SolverChoice::pp_prefix
std::string pp_prefix
Definition: ERF_DataStruct.H:538
SolverChoice::init_params
void init_params(int max_level)
Definition: ERF_DataStruct.H:80
-
SolverChoice::display
void display(int max_level)
Definition: ERF_DataStruct.H:400
+
SolverChoice::display
void display(int max_level)
Definition: ERF_DataStruct.H:401
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diff --git a/classKessler.html b/classKessler.html index 5b2f8999a7..f32023356a 100644 --- a/classKessler.html +++ b/classKessler.html @@ -682,7 +682,7 @@

MicVar_Kess::qt
@ qt
Definition: ERF_Kessler.H:35

MicVar_Kess::rain_accum
@ rain_accum
Definition: ERF_Kessler.H:41
MicVar_Kess::qv
@ qv
Definition: ERF_Kessler.H:36
-
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618

Referenced by Advance().

@@ -927,10 +927,10 @@

Kessler::m_gOcp
amrex::Real m_gOcp
Definition: ERF_Kessler.H:174

Kessler::m_fac_fus
amrex::Real m_fac_fus
Definition: ERF_Kessler.H:172
Kessler::m_axis
int m_axis
Definition: ERF_Kessler.H:165
-
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:571
-
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:631
-
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:630
-
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:628
+
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:572
+
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:632
+
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:631
+
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:629
diff --git a/classPlaneAverage.html b/classPlaneAverage.html index 557f93b022..fb09734139 100644 --- a/classPlaneAverage.html +++ b/classPlaneAverage.html @@ -387,18 +387,17 @@

fill line storage with averages

-

Referenced by SAM::Compute_Coefficients(), make_buoyancy(), make_mom_sources(), make_sources(), and operator()().

+

Referenced by SAM::Compute_Coefficients(), make_mom_sources(), make_sources(), and operator()().

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@@ -552,17 +551,16 @@

56 { return *m_field; }
-

Referenced by SAM::Compute_Coefficients(), make_buoyancy(), make_mom_sources(), and make_sources().

+

Referenced by SAM::Compute_Coefficients(), make_mom_sources(), and make_sources().

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@@ -622,17 +620,16 @@

45  return m_line_average;
46  }
-

Referenced by SAM::Compute_Coefficients(), make_buoyancy(), make_mom_sources(), and make_sources().

+

Referenced by SAM::Compute_Coefficients(), make_mom_sources(), and make_sources().

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@@ -777,17 +774,16 @@

41 { return m_ncell_line; }
-

Referenced by SAM::Compute_Coefficients(), make_buoyancy(), make_mom_sources(), and make_sources().

+

Referenced by SAM::Compute_Coefficients(), make_mom_sources(), and make_sources().

Here is the caller graph for this function:
- + - - - + +
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335 
336  SolverChoice::set_flat_terrain_flag();
337  }
-
SolverChoice::set_flat_terrain_flag
static void set_flat_terrain_flag()
Definition: ERF_DataStruct.H:526
+
SolverChoice::set_flat_terrain_flag
static void set_flat_terrain_flag()
Definition: ERF_DataStruct.H:527
Here is the call graph for this function:
diff --git a/classSAM.html b/classSAM.html index a0403a50a9..a0d6cdd888 100644 --- a/classSAM.html +++ b/classSAM.html @@ -617,7 +617,7 @@

MicVar::theta
@ theta
Definition: ERF_SAM.H:31

MicVar::qcl
@ qcl
Definition: ERF_SAM.H:38
MicVar::tabs
@ tabs
Definition: ERF_SAM.H:32
-
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:617
+
SolverChoice::moisture_type
MoistureType moisture_type
Definition: ERF_DataStruct.H:618

Referenced by Advance().

@@ -1116,11 +1116,11 @@

CONST_GRAV
constexpr amrex::Real CONST_GRAV
Definition: ERF_Constants.H:21

SAM::doprecip
bool doprecip
Definition: ERF_SAM.H:311
SAM::docloud
bool docloud
Definition: ERF_SAM.H:311
-
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:572
-
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:571
-
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:631
-
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:630
-
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:628
+
SolverChoice::rdOcp
amrex::Real rdOcp
Definition: ERF_DataStruct.H:573
+
SolverChoice::c_p
amrex::Real c_p
Definition: ERF_DataStruct.H:572
+
SolverChoice::do_precip
bool do_precip
Definition: ERF_DataStruct.H:632
+
SolverChoice::do_cloud
bool do_cloud
Definition: ERF_DataStruct.H:631
+
SolverChoice::ave_plane
int ave_plane
Definition: ERF_DataStruct.H:629
diff --git a/globals_b.html b/globals_b.html index 6109315d18..e835613400 100644 --- a/globals_b.html +++ b/globals_b.html @@ -122,8 +122,8 @@

- b -

  • buoyancy_dry_anelastic_T() : ERF_buoyancy_utils.H
    • -
  • buoyancy_dry_default() -: ERF_buoyancy_utils.H +
  • buoyancy_dry_Thpert() +: ERF_buoyancy_utils.H
  • buoyancy_dry_Tpert() : ERF_buoyancy_utils.H @@ -131,17 +131,14 @@

    - b -

    diff --git a/globals_func_b.html b/globals_func_b.html index b72fddac5c..184a81fc0b 100644 --- a/globals_func_b.html +++ b/globals_func_b.html @@ -100,8 +100,8 @@

    - b -

    • buoyancy_dry_anelastic_T() : ERF_buoyancy_utils.H
      • -
    • buoyancy_dry_default() -: ERF_buoyancy_utils.H +
    • buoyancy_dry_Thpert() +: ERF_buoyancy_utils.H
    • buoyancy_dry_Tpert() : ERF_buoyancy_utils.H @@ -109,17 +109,14 @@

      - b -

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+"classCloudRadProps.html#a7c91a5b46f8d85666e0ca0d1de8d23aa", +"classERF.html#aa90c9756f684404f8b69b8a23568b535", +"classEulerianMicrophysics.html#ac68028f2920ccb380c605099adb7d604", +"classMRISplitIntegrator.html#a294f18465629a72da152b3e9aa4b0455", +"classNullWindFarm.html#af31330323768a6cc38c99205d987b558", +"classRadiation.html#a913e1b4a5c5ddf093f81c6a6c7051035", +"classSimpleAD.html#a171f86e19e21f7c5632ca2c459d489f5", +"functions_func_p.html", +"structDiffChoice.html#a7013ac6c12a0fab52b3c212457441517", +"structSolverChoice.html#a3b9fef36e4613507eef87379c2c9bf03", +"structWENO__Z3.html#aa18592e1e73ba3a08e57fbb694266138" ]; var SYNCONMSG = 'click to disable panel synchronisation'; diff --git a/navtreeindex10.js b/navtreeindex10.js index d07dd0c6a8..b4cf5243ff 100644 --- a/navtreeindex10.js +++ b/navtreeindex10.js @@ -1,6 +1,5 @@ var NAVTREEINDEX10 = { -"classSimpleAD.html#a1665d726556fc42558e77fe94e732d43":[2,0,77,15], "classSimpleAD.html#a171f86e19e21f7c5632ca2c459d489f5":[2,0,77,17], "classSimpleAD.html#a1d87675adbb7e56ff0969cd1543c72c4":[2,0,77,6], "classSimpleAD.html#a4a8f7fe612cdc61b58b386b0b3f61da7":[2,0,77,7], @@ -249,5 +248,6 @@ var NAVTREEINDEX10 = "functions_func_k.html":[2,3,1,9], "functions_func_l.html":[2,3,1,10], "functions_func_m.html":[2,3,1,11], -"functions_func_n.html":[2,3,1,12] +"functions_func_n.html":[2,3,1,12], +"functions_func_o.html":[2,3,1,13] }; diff --git a/navtreeindex11.js b/navtreeindex11.js index 284827a086..101260d688 100644 --- a/navtreeindex11.js +++ b/navtreeindex11.js @@ -1,6 +1,5 @@ var NAVTREEINDEX11 = { -"functions_func_o.html":[2,3,1,13], "functions_func_p.html":[2,3,1,14], "functions_func_q.html":[2,3,1,15], "functions_func_r.html":[2,3,1,16], @@ -30,8 +29,8 @@ var NAVTREEINDEX11 = "functions_type.html":[2,3,3], "functions_u.html":[2,3,0,20], "functions_v.html":[2,3,0,21], -"functions_vars.html":[2,3,2], "functions_vars.html":[2,3,2,0], 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+ ['project_5finitial_5fvelocity_4796',['project_initial_velocity',['../structSolverChoice.html#aa7bb7f3c8b475b0e446c271d8aa5497f',1,'SolverChoice']]], + ['prop_4797',['prop',['../classMamConstituents.html#af4a85a7b8e8e4a677c8d34970487f14e',1,'MamConstituents']]], + ['props_4798',['props',['../structMamConstituents_1_1mode__component__t.html#a3f9b94d6f306e89f1be96830e442fb10',1,'MamConstituents::mode_component_t']]], + ['pt_5ftype_4799',['pt_type',['../structTurbulentPerturbation.html#ad0d78e0adbb21ae36f4483dd30e15d58',1,'TurbulentPerturbation']]] ]; diff --git a/structSolverChoice.html b/structSolverChoice.html index cab8ae0a34..5ead8f2511 100644 --- a/structSolverChoice.html +++ b/structSolverChoice.html @@ -327,57 +327,57 @@

      -
      460  {
      -
      461  amrex::ParmParse pp(pp_prefix);
      -
      462 
      -
      463  // Read the rotational time period (in seconds)
      -
      464  amrex::Real rot_time_period = 86400.0;
      -
      465  pp.query("rotational_time_period", rot_time_period);
      -
      466 
      -
      467  coriolis_factor = 2.0 * 2.0 * PI / rot_time_period;
      -
      468  amrex::Print() << "Coriolis factor = " << coriolis_factor << std::endl;
      -
      469 
      -
      470  amrex::Real latitude = 90.0;
      -
      471  pp.query("latitude", latitude);
      -
      472 
      -
      473  pp.query("coriolis_3d", coriolis_3d);
      -
      474 
      -
      475  // Convert to radians
      -
      476  latitude *= (PI/180.);
      -
      477  sinphi = std::sin(latitude);
      -
      478  if (coriolis_3d) {
      -
      479  cosphi = std::cos(latitude);
      -
      480  }
      -
      481 
      -
      482  amrex::Print() << "Coriolis frequency, f = " << coriolis_factor * sinphi << " 1/s" << std::endl;
      -
      483 
      -
      484  if (abl_driver_type == ABLDriverType::GeostrophicWind) {
      -
      485  // Read in the geostrophic wind -- we only use this to construct
      -
      486  // the forcing term so no need to keep it
      -
      487  amrex::Vector<amrex::Real> abl_geo_wind(3);
      -
      488  pp.queryarr("abl_geo_wind",abl_geo_wind);
      -
      489 
      -
      490  if(!pp.query("abl_geo_wind_table",abl_geo_wind_table)) {
      -
      491  abl_geo_forcing = {
      -
      492  -coriolis_factor * (abl_geo_wind[1]*sinphi - abl_geo_wind[2]*cosphi),
      -
      493  coriolis_factor * abl_geo_wind[0]*sinphi,
      -
      494  -coriolis_factor * abl_geo_wind[0]*cosphi
      -
      495  };
      -
      496  } else {
      -
      497  amrex::Print() << "NOTE: abl_geo_wind_table provided, ignoring input abl_geo_wind" << std::endl;
      -
      498  }
      -
      499  }
      -
      500  }
      +
      461  {
      +
      462  amrex::ParmParse pp(pp_prefix);
      +
      463 
      +
      464  // Read the rotational time period (in seconds)
      +
      465  amrex::Real rot_time_period = 86400.0;
      +
      466  pp.query("rotational_time_period", rot_time_period);
      +
      467 
      +
      468  coriolis_factor = 2.0 * 2.0 * PI / rot_time_period;
      +
      469  amrex::Print() << "Coriolis factor = " << coriolis_factor << std::endl;
      +
      470 
      +
      471  amrex::Real latitude = 90.0;
      +
      472  pp.query("latitude", latitude);
      +
      473 
      +
      474  pp.query("coriolis_3d", coriolis_3d);
      +
      475 
      +
      476  // Convert to radians
      +
      477  latitude *= (PI/180.);
      +
      478  sinphi = std::sin(latitude);
      +
      479  if (coriolis_3d) {
      +
      480  cosphi = std::cos(latitude);
      +
      481  }
      +
      482 
      +
      483  amrex::Print() << "Coriolis frequency, f = " << coriolis_factor * sinphi << " 1/s" << std::endl;
      +
      484 
      +
      485  if (abl_driver_type == ABLDriverType::GeostrophicWind) {
      +
      486  // Read in the geostrophic wind -- we only use this to construct
      +
      487  // the forcing term so no need to keep it
      +
      488  amrex::Vector<amrex::Real> abl_geo_wind(3);
      +
      489  pp.queryarr("abl_geo_wind",abl_geo_wind);
      +
      490 
      +
      491  if(!pp.query("abl_geo_wind_table",abl_geo_wind_table)) {
      +
      492  abl_geo_forcing = {
      +
      493  -coriolis_factor * (abl_geo_wind[1]*sinphi - abl_geo_wind[2]*cosphi),
      +
      494  coriolis_factor * abl_geo_wind[0]*sinphi,
      +
      495  -coriolis_factor * abl_geo_wind[0]*cosphi
      +
      496  };
      +
      497  } else {
      +
      498  amrex::Print() << "NOTE: abl_geo_wind_table provided, ignoring input abl_geo_wind" << std::endl;
      +
      499  }
      +
      500  }
      +
      501  }
      PI
      constexpr amrex::Real PI
      Definition: ERF_Constants.H:6
      pp
      AMREX_GPU_HOST_DEVICE AMREX_FORCE_INLINE amrex::Real pp(amrex::Real y)
      Definition: ERF_Microphysics_Utils.H:219
      -
      SolverChoice::coriolis_factor
      amrex::Real coriolis_factor
      Definition: ERF_DataStruct.H:582
      -
      SolverChoice::cosphi
      amrex::Real cosphi
      Definition: ERF_DataStruct.H:583
      -
      SolverChoice::pp_prefix
      std::string pp_prefix
      Definition: ERF_DataStruct.H:537
      -
      SolverChoice::abl_geo_forcing
      amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_geo_forcing
      Definition: ERF_DataStruct.H:624
      -
      SolverChoice::sinphi
      amrex::Real sinphi
      Definition: ERF_DataStruct.H:584
      -
      SolverChoice::coriolis_3d
      bool coriolis_3d
      Definition: ERF_DataStruct.H:556
      -
      SolverChoice::abl_geo_wind_table
      std::string abl_geo_wind_table
      Definition: ERF_DataStruct.H:625
      -
      SolverChoice::abl_driver_type
      ABLDriverType abl_driver_type
      Definition: ERF_DataStruct.H:622
      +
      SolverChoice::coriolis_factor
      amrex::Real coriolis_factor
      Definition: ERF_DataStruct.H:583
      +
      SolverChoice::cosphi
      amrex::Real cosphi
      Definition: ERF_DataStruct.H:584
      +
      SolverChoice::pp_prefix
      std::string pp_prefix
      Definition: ERF_DataStruct.H:538
      +
      SolverChoice::abl_geo_forcing
      amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_geo_forcing
      Definition: ERF_DataStruct.H:625
      +
      SolverChoice::sinphi
      amrex::Real sinphi
      Definition: ERF_DataStruct.H:585
      +
      SolverChoice::coriolis_3d
      bool coriolis_3d
      Definition: ERF_DataStruct.H:557
      +
      SolverChoice::abl_geo_wind_table
      std::string abl_geo_wind_table
      Definition: ERF_DataStruct.H:626
      +
      SolverChoice::abl_driver_type
      ABLDriverType abl_driver_type
      Definition: ERF_DataStruct.H:623

      Referenced by init_params().

      @@ -424,58 +424,58 @@

      -
      358  {
      -
      359  // Warn for PBL models and moisture - these may not yet be compatible
      -
      360  for (int lev = 0; lev <= max_level; lev++) {
      -
      361  if ((moisture_type != MoistureType::None) && (turbChoice[lev].pbl_type != PBLType::None)) {
      -
      362  amrex::Warning("\n*** WARNING: Moisture may not yet be compatible with PBL models, \n proceed with caution ***");
      -
      363  }
      -
      364  }
      -
      365  //
      -
      366  // Buoyancy type check
      -
      367  //
      -
      368  if (buoyancy_type != 1 && buoyancy_type != 2 && buoyancy_type != 3 && buoyancy_type != 4) {
      -
      369  amrex::Abort("buoyancy_type must be 1, 2, 3 or 4");
      -
      370  }
      -
      371 
      -
      372  if (!use_lagged_delta_rt && !(terrain_type == TerrainType::Moving)) {
      -
      373  amrex::Error("Can't turn off lagged_delta_rt when terrain not moving");
      -
      374  }
      -
      375 
      -
      376  //
      -
      377  // Wind farm checks
      -
      378  //
      -
      379  if (windfarm_type==WindFarmType::SimpleAD and sampling_distance_by_D < 0.0) {
      -
      380  amrex::Abort("To use simplified actuator disks, you need to provide a variable"
      -
      381  " erf.sampling_distance_by_D in the inputs which specifies the upstream"
      -
      382  " distance as a factor of the turbine diameter at which the incoming free stream"
      -
      383  " velocity will be computed at.");
      -
      384  }
      -
      385  if ( (windfarm_type==WindFarmType::SimpleAD ||
      -
      386  windfarm_type==WindFarmType::GeneralAD ) && turb_disk_angle < 0.0) {
      -
      387  amrex::Abort("To use simplified actuator disks, you need to provide a variable"
      -
      388  " erf.turb_disk_angle_from_x in the inputs which is the angle of the face of the"
      -
      389  " turbine disk from the x-axis. A turbine facing an oncoming flow in the x-direction"
      -
      390  " will have turb_disk_angle value of 90 deg.");
      -
      391  }
      -
      392  if (windfarm_loc_type == WindFarmLocType::lat_lon and (windfarm_x_shift < 0.0 or windfarm_y_shift < 0.0)) {
      -
      393  amrex::Abort("You are using windfarms with latitude-logitude option to position the turbines."
      -
      394  " For this you should provide the inputs erf.windfarm_x_shift and"
      -
      395  " erf.windfarm_y_shift which are the values by which the bounding box of the"
      -
      396  " windfarm is shifted from the x and the y axes.");
      -
      397  }
      -
      398  }
      -
      SolverChoice::use_lagged_delta_rt
      bool use_lagged_delta_rt
      Definition: ERF_DataStruct.H:567
      -
      SolverChoice::windfarm_x_shift
      amrex::Real windfarm_x_shift
      Definition: ERF_DataStruct.H:645
      -
      SolverChoice::windfarm_loc_type
      WindFarmLocType windfarm_loc_type
      Definition: ERF_DataStruct.H:619
      -
      SolverChoice::sampling_distance_by_D
      amrex::Real sampling_distance_by_D
      Definition: ERF_DataStruct.H:643
      -
      SolverChoice::turbChoice
      amrex::Vector< TurbChoice > turbChoice
      Definition: ERF_DataStruct.H:534
      -
      SolverChoice::moisture_type
      MoistureType moisture_type
      Definition: ERF_DataStruct.H:617
      -
      SolverChoice::terrain_type
      static TerrainType terrain_type
      Definition: ERF_DataStruct.H:523
      -
      SolverChoice::windfarm_type
      WindFarmType windfarm_type
      Definition: ERF_DataStruct.H:618
      -
      SolverChoice::buoyancy_type
      int buoyancy_type
      Definition: ERF_DataStruct.H:551
      -
      SolverChoice::turb_disk_angle
      amrex::Real turb_disk_angle
      Definition: ERF_DataStruct.H:644
      -
      SolverChoice::windfarm_y_shift
      amrex::Real windfarm_y_shift
      Definition: ERF_DataStruct.H:646
      +
      359  {
      +
      360  // Warn for PBL models and moisture - these may not yet be compatible
      +
      361  for (int lev = 0; lev <= max_level; lev++) {
      +
      362  if ((moisture_type != MoistureType::None) && (turbChoice[lev].pbl_type != PBLType::None)) {
      +
      363  amrex::Warning("\n*** WARNING: Moisture may not yet be compatible with PBL models, \n proceed with caution ***");
      +
      364  }
      +
      365  }
      +
      366  //
      +
      367  // Buoyancy type check
      +
      368  //
      +
      369  if (buoyancy_type != 1 && buoyancy_type != 2 && buoyancy_type != 3 && buoyancy_type != 4) {
      +
      370  amrex::Abort("buoyancy_type must be 1, 2, 3 or 4");
      +
      371  }
      +
      372 
      +
      373  if (!use_lagged_delta_rt && !(terrain_type == TerrainType::Moving)) {
      +
      374  amrex::Error("Can't turn off lagged_delta_rt when terrain not moving");
      +
      375  }
      +
      376 
      +
      377  //
      +
      378  // Wind farm checks
      +
      379  //
      +
      380  if (windfarm_type==WindFarmType::SimpleAD and sampling_distance_by_D < 0.0) {
      +
      381  amrex::Abort("To use simplified actuator disks, you need to provide a variable"
      +
      382  " erf.sampling_distance_by_D in the inputs which specifies the upstream"
      +
      383  " distance as a factor of the turbine diameter at which the incoming free stream"
      +
      384  " velocity will be computed at.");
      +
      385  }
      +
      386  if ( (windfarm_type==WindFarmType::SimpleAD ||
      +
      387  windfarm_type==WindFarmType::GeneralAD ) && turb_disk_angle < 0.0) {
      +
      388  amrex::Abort("To use simplified actuator disks, you need to provide a variable"
      +
      389  " erf.turb_disk_angle_from_x in the inputs which is the angle of the face of the"
      +
      390  " turbine disk from the x-axis. A turbine facing an oncoming flow in the x-direction"
      +
      391  " will have turb_disk_angle value of 90 deg.");
      +
      392  }
      +
      393  if (windfarm_loc_type == WindFarmLocType::lat_lon and (windfarm_x_shift < 0.0 or windfarm_y_shift < 0.0)) {
      +
      394  amrex::Abort("You are using windfarms with latitude-logitude option to position the turbines."
      +
      395  " For this you should provide the inputs erf.windfarm_x_shift and"
      +
      396  " erf.windfarm_y_shift which are the values by which the bounding box of the"
      +
      397  " windfarm is shifted from the x and the y axes.");
      +
      398  }
      +
      399  }
      +
      SolverChoice::use_lagged_delta_rt
      bool use_lagged_delta_rt
      Definition: ERF_DataStruct.H:568
      +
      SolverChoice::windfarm_x_shift
      amrex::Real windfarm_x_shift
      Definition: ERF_DataStruct.H:646
      +
      SolverChoice::windfarm_loc_type
      WindFarmLocType windfarm_loc_type
      Definition: ERF_DataStruct.H:620
      +
      SolverChoice::sampling_distance_by_D
      amrex::Real sampling_distance_by_D
      Definition: ERF_DataStruct.H:644
      +
      SolverChoice::turbChoice
      amrex::Vector< TurbChoice > turbChoice
      Definition: ERF_DataStruct.H:535
      +
      SolverChoice::moisture_type
      MoistureType moisture_type
      Definition: ERF_DataStruct.H:618
      +
      SolverChoice::terrain_type
      static TerrainType terrain_type
      Definition: ERF_DataStruct.H:524
      +
      SolverChoice::windfarm_type
      WindFarmType windfarm_type
      Definition: ERF_DataStruct.H:619
      +
      SolverChoice::buoyancy_type
      int buoyancy_type
      Definition: ERF_DataStruct.H:552
      +
      SolverChoice::turb_disk_angle
      amrex::Real turb_disk_angle
      Definition: ERF_DataStruct.H:645
      +
      SolverChoice::windfarm_y_shift
      amrex::Real windfarm_y_shift
      Definition: ERF_DataStruct.H:647

      Referenced by init_params().

      @@ -513,75 +513,75 @@

      -
      401  {
      -
      402  amrex::Print() << "SOLVER CHOICE: " << std::endl;
      -
      403  amrex::Print() << "force_stage1_single_substep : " << force_stage1_single_substep << std::endl;
      -
      404  for (int lev = 0; lev <= max_level; lev++) {
      -
      405  amrex::Print() << "anelastic at level : " << lev << " is " << anelastic[lev] << std::endl;
      -
      406  if (substepping_type[lev] == SubsteppingType::None) {
      -
      407  amrex::Print() << "No substepping at level " << lev << std::endl;
      -
      408  } else if (substepping_type[lev] == SubsteppingType::Explicit) {
      -
      409  amrex::Print() << "Explicit substepping at level " << lev << std::endl;
      -
      410  } else if (substepping_type[lev] == SubsteppingType::Implicit) {
      -
      411  amrex::Print() << "Implicit substepping at level " << lev << std::endl;
      -
      412  }
      -
      413  }
      -
      414  amrex::Print() << "use_coriolis : " << use_coriolis << std::endl;
      -
      415  amrex::Print() << "use_gravity : " << use_gravity << std::endl;
      -
      416 
      -
      417  amrex::Print() << "Terrain Type: " << std::endl;
      -
      418  if (terrain_type == TerrainType::Static) {
      -
      419  amrex::Print() << " Static" << std::endl;
      -
      420  } else if (terrain_type == TerrainType::Moving) {
      -
      421  amrex::Print() << " Moving" << std::endl;
      -
      422  } else {
      -
      423  amrex::Print() << " None" << std::endl;
      -
      424  }
      -
      425 
      -
      426  amrex::Print() << "ABL Driver Type: " << std::endl;
      -
      427  if (abl_driver_type == ABLDriverType::None) {
      -
      428  amrex::Print() << " None" << std::endl;
      -
      429  } else if (abl_driver_type == ABLDriverType::PressureGradient) {
      -
      430  amrex::Print() << " Pressure Gradient "
      -
      431  << amrex::RealVect(abl_pressure_grad[0],abl_pressure_grad[1],abl_pressure_grad[2])
      -
      432  << std::endl;
      -
      433  } else if (abl_driver_type == ABLDriverType::GeostrophicWind) {
      -
      434  amrex::Print() << " Geostrophic Wind "
      -
      435  << amrex::RealVect(abl_geo_forcing[0],abl_geo_forcing[1],abl_geo_forcing[2])
      -
      436  << std::endl;
      -
      437  }
      -
      438 
      -
      439  if (max_level > 0) {
      -
      440  amrex::Print() << "Coupling Type: " << std::endl;
      -
      441  if (coupling_type == CouplingType::TwoWay) {
      -
      442  amrex::Print() << " Two-way" << std::endl;
      -
      443  } else if (coupling_type == CouplingType::OneWay) {
      -
      444  amrex::Print() << " One-way" << std::endl;
      -
      445  }
      -
      446  }
      -
      447 
      -
      448  amrex::Print() << "Buoyancy_type : " << buoyancy_type << std::endl;
      -
      449 
      -
      450  advChoice.display();
      -
      451  diffChoice.display();
      -
      452  spongeChoice.display();
      -
      453 
      -
      454  for (int lev = 0; lev <= max_level; lev++) {
      -
      455  turbChoice[lev].display(lev);
      -
      456  }
      -
      457  }
      +
      402  {
      +
      403  amrex::Print() << "SOLVER CHOICE: " << std::endl;
      +
      404  amrex::Print() << "force_stage1_single_substep : " << force_stage1_single_substep << std::endl;
      +
      405  for (int lev = 0; lev <= max_level; lev++) {
      +
      406  amrex::Print() << "anelastic at level : " << lev << " is " << anelastic[lev] << std::endl;
      +
      407  if (substepping_type[lev] == SubsteppingType::None) {
      +
      408  amrex::Print() << "No substepping at level " << lev << std::endl;
      +
      409  } else if (substepping_type[lev] == SubsteppingType::Explicit) {
      +
      410  amrex::Print() << "Explicit substepping at level " << lev << std::endl;
      +
      411  } else if (substepping_type[lev] == SubsteppingType::Implicit) {
      +
      412  amrex::Print() << "Implicit substepping at level " << lev << std::endl;
      +
      413  }
      +
      414  }
      +
      415  amrex::Print() << "use_coriolis : " << use_coriolis << std::endl;
      +
      416  amrex::Print() << "use_gravity : " << use_gravity << std::endl;
      +
      417 
      +
      418  amrex::Print() << "Terrain Type: " << std::endl;
      +
      419  if (terrain_type == TerrainType::Static) {
      +
      420  amrex::Print() << " Static" << std::endl;
      +
      421  } else if (terrain_type == TerrainType::Moving) {
      +
      422  amrex::Print() << " Moving" << std::endl;
      +
      423  } else {
      +
      424  amrex::Print() << " None" << std::endl;
      +
      425  }
      +
      426 
      +
      427  amrex::Print() << "ABL Driver Type: " << std::endl;
      +
      428  if (abl_driver_type == ABLDriverType::None) {
      +
      429  amrex::Print() << " None" << std::endl;
      +
      430  } else if (abl_driver_type == ABLDriverType::PressureGradient) {
      +
      431  amrex::Print() << " Pressure Gradient "
      +
      432  << amrex::RealVect(abl_pressure_grad[0],abl_pressure_grad[1],abl_pressure_grad[2])
      +
      433  << std::endl;
      +
      434  } else if (abl_driver_type == ABLDriverType::GeostrophicWind) {
      +
      435  amrex::Print() << " Geostrophic Wind "
      +
      436  << amrex::RealVect(abl_geo_forcing[0],abl_geo_forcing[1],abl_geo_forcing[2])
      +
      437  << std::endl;
      +
      438  }
      +
      439 
      +
      440  if (max_level > 0) {
      +
      441  amrex::Print() << "Coupling Type: " << std::endl;
      +
      442  if (coupling_type == CouplingType::TwoWay) {
      +
      443  amrex::Print() << " Two-way" << std::endl;
      +
      444  } else if (coupling_type == CouplingType::OneWay) {
      +
      445  amrex::Print() << " One-way" << std::endl;
      +
      446  }
      +
      447  }
      +
      448 
      +
      449  amrex::Print() << "Buoyancy_type : " << buoyancy_type << std::endl;
      +
      450 
      +
      451  advChoice.display();
      +
      452  diffChoice.display();
      +
      453  spongeChoice.display();
      +
      454 
      +
      455  for (int lev = 0; lev <= max_level; lev++) {
      +
      456  turbChoice[lev].display(lev);
      +
      457  }
      +
      458  }
      AdvChoice::display
      void display()
      Definition: ERF_AdvStruct.H:189
      DiffChoice::display
      void display()
      Definition: ERF_DiffStruct.H:56
      -
      SolverChoice::diffChoice
      DiffChoice diffChoice
      Definition: ERF_DataStruct.H:532
      -
      SolverChoice::use_gravity
      bool use_gravity
      Definition: ERF_DataStruct.H:554
      -
      SolverChoice::force_stage1_single_substep
      int force_stage1_single_substep
      Definition: ERF_DataStruct.H:539
      -
      SolverChoice::abl_pressure_grad
      amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_pressure_grad
      Definition: ERF_DataStruct.H:623
      -
      SolverChoice::substepping_type
      amrex::Vector< SubsteppingType > substepping_type
      Definition: ERF_DataStruct.H:541
      -
      SolverChoice::use_coriolis
      bool use_coriolis
      Definition: ERF_DataStruct.H:555
      -
      SolverChoice::anelastic
      amrex::Vector< int > anelastic
      Definition: ERF_DataStruct.H:542
      -
      SolverChoice::advChoice
      AdvChoice advChoice
      Definition: ERF_DataStruct.H:531
      -
      SolverChoice::spongeChoice
      SpongeChoice spongeChoice
      Definition: ERF_DataStruct.H:533
      -
      SolverChoice::coupling_type
      CouplingType coupling_type
      Definition: ERF_DataStruct.H:616
      +
      SolverChoice::diffChoice
      DiffChoice diffChoice
      Definition: ERF_DataStruct.H:533
      +
      SolverChoice::use_gravity
      bool use_gravity
      Definition: ERF_DataStruct.H:555
      +
      SolverChoice::force_stage1_single_substep
      int force_stage1_single_substep
      Definition: ERF_DataStruct.H:540
      +
      SolverChoice::abl_pressure_grad
      amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > abl_pressure_grad
      Definition: ERF_DataStruct.H:624
      +
      SolverChoice::substepping_type
      amrex::Vector< SubsteppingType > substepping_type
      Definition: ERF_DataStruct.H:542
      +
      SolverChoice::use_coriolis
      bool use_coriolis
      Definition: ERF_DataStruct.H:556
      +
      SolverChoice::anelastic
      amrex::Vector< int > anelastic
      Definition: ERF_DataStruct.H:543
      +
      SolverChoice::advChoice
      AdvChoice advChoice
      Definition: ERF_DataStruct.H:532
      +
      SolverChoice::spongeChoice
      SpongeChoice spongeChoice
      Definition: ERF_DataStruct.H:534
      +
      SolverChoice::coupling_type
      CouplingType coupling_type
      Definition: ERF_DataStruct.H:617
      SpongeChoice::display
      void display()
      Definition: ERF_SpongeStruct.H:45
      Here is the call graph for this function:
      @@ -669,233 +669,234 @@

      126  if (moisture_type == MoistureType::Kessler_NoRain ||

      127  moisture_type == MoistureType::SAM ||
      128  moisture_type == MoistureType::SAM_NoIce ||
      -
      129  moisture_type == MoistureType::SAM_NoPrecip_NoIce) {
      -
      130  buoyancy_type = 1; // asserted in make buoyancy
      -
      131  } else {
      -
      132  buoyancy_type = 2; // uses Tprime
      -
      133  }
      -
      134  }
      -
      135 
      -
      136  // Which expression (1,2 or 3) to use for buoyancy
      -
      137  pp.query("buoyancy_type", buoyancy_type);
      -
      138 
      -
      139  // What type of land surface model to use
      -
      140  lsm_type = LandSurfaceType::None; // Default
      -
      141  pp.query_enum_case_insensitive("land_surface_model",lsm_type);
      -
      142 
      -
      143  // Is the terrain none, static or moving?
      -
      144  pp.query_enum_case_insensitive("terrain_type",terrain_type);
      -
      145 
      -
      146  // Use lagged_delta_rt in the fast integrator?
      -
      147  pp.query("use_lagged_delta_rt", use_lagged_delta_rt);
      -
      148 
      -
      149  // These default to true but are used for unit testing
      -
      150  pp.query("use_gravity", use_gravity);
      -
      151  gravity = use_gravity? CONST_GRAV: 0.0;
      -
      152 
      -
      153  pp.query("c_p", c_p);
      -
      154  rdOcp = R_d / c_p;
      -
      155 
      -
      156  read_int_string(max_level, "anelastic", anelastic, 0);
      -
      157 
      -
      158  // *******************************************************************************
      -
      159  // Read substepping_type and allow for different values at each level
      -
      160  // *******************************************************************************
      -
      161  substepping_type.resize(max_level+1);
      -
      162 
      -
      163  for (int i = 0; i <= max_level; i++) {
      -
      164  substepping_type[i] = SubsteppingType::Implicit;
      -
      165  }
      -
      166 
      -
      167  int nvals = pp.countval("substepping_type");
      -
      168  AMREX_ALWAYS_ASSERT(nvals == 0 || nvals == 1 || nvals >= max_level+1);
      -
      169 
      -
      170  if (nvals == 1) {
      -
      171  pp.query_enum_case_insensitive("substepping_type",substepping_type[0]);
      -
      172  for (int i = 1; i <= max_level; i++) {
      -
      173  substepping_type[i] = substepping_type[0];
      -
      174  }
      -
      175  } else if (nvals > 1) { // in this case we have asserted nvals >= max_level+1
      -
      176  for (int i = 0; i <= max_level; i++) {
      -
      177  pp.query_enum_case_insensitive("substepping_type",substepping_type[i],i);
      -
      178  }
      -
      179  }
      -
      180 
      -
      181  // *******************************************************************************
      -
      182  // Error check on deprecated input
      -
      183  // *******************************************************************************
      -
      184  int nvals_old = pp.countval("no_substepping");
      -
      185  if (nvals_old > 0) {
      -
      186  amrex::Abort("The no_substepping flag is deprecated -- set substepping_type instead");
      -
      187  }
      -
      188  // *******************************************************************************
      -
      189 
      -
      190  bool any_anelastic = false;
      -
      191  for (int i = 0; i <= max_level; ++i) {
      -
      192  if (anelastic[i] == 1) any_anelastic = true;
      -
      193  }
      -
      194 
      -
      195  // If anelastic at all, we do not advect rho -- it is always == rho0
      -
      196  if (any_anelastic == 1) {
      -
      197  constant_density = true;
      -
      198  project_initial_velocity = true;
      -
      199  buoyancy_type = 2; // uses Tprime
      -
      200  } else {
      -
      201  pp.query("project_initial_velocity", project_initial_velocity);
      -
      202 
      -
      203  constant_density = false; // We default to false but allow the user to set it
      -
      204  pp.query("constant_density", constant_density);
      -
      205  }
      -
      206 
      -
      207  // *******************************************************************************
      -
      208 
      -
      209  pp.query("ncorr", ncorr);
      -
      210  pp.query("poisson_abstol", poisson_abstol);
      -
      211  pp.query("poisson_reltol", poisson_reltol);
      -
      212 
      -
      213  for (int lev = 0; lev <= max_level; lev++) {
      -
      214  if (anelastic[lev] != 0)
      -
      215  {
      -
      216  substepping_type[lev] = SubsteppingType::None;
      -
      217  }
      -
      218  }
      -
      219 
      -
      220  pp.query("force_stage1_single_substep", force_stage1_single_substep);
      -
      221 
      -
      222  // Include Coriolis forcing?
      -
      223  pp.query("use_coriolis", use_coriolis);
      -
      224 
      -
      225  // Include Rayleigh damping (separate flags for each variable)
      -
      226  pp.query("rayleigh_damp_U", rayleigh_damp_U);
      -
      227  pp.query("rayleigh_damp_V", rayleigh_damp_V);
      -
      228  pp.query("rayleigh_damp_W", rayleigh_damp_W);
      -
      229  pp.query("rayleigh_damp_T", rayleigh_damp_T);
      -
      230  pp.query("rayleigh_dampcoef", rayleigh_dampcoef);
      -
      231  pp.query("rayleigh_zdamp", rayleigh_zdamp);
      -
      232 
      -
      233  // Flag to do explicit MOST formulation
      -
      234  pp.query("use_explicit_most",use_explicit_most);
      -
      235 
      -
      236  // Flag to do MOST rotations with terrain
      -
      237  pp.query("use_rotate_most",use_rotate_most);
      -
      238  if (use_rotate_most) {
      -
      239  AMREX_ASSERT_WITH_MESSAGE(terrain_type != TerrainType::None,"MOST stress rotations are only valid with terrain!");
      -
      240  AMREX_ASSERT_WITH_MESSAGE(use_explicit_most, "MOST Stress rotations are only valid with explicit MOST!");
      -
      241  }
      -
      242 
      -
      243  // Which external forcings?
      -
      244  abl_driver_type = ABLDriverType::None; // Default: no ABL driver for simulating classical fluid dynamics problems
      -
      245  pp.query_enum_case_insensitive("abl_driver_type",abl_driver_type);
      -
      246 
      -
      247  // Which type of inflow turbulent generation
      -
      248  pert_type = PerturbationType::None; // Default
      -
      249  pp.query_enum_case_insensitive("perturbation_type",pert_type);
      -
      250 
      -
      251  amrex::Vector<amrex::Real> abl_pressure_grad_in = {0.0, 0.0, 0.0};
      -
      252  pp.queryarr("abl_pressure_grad",abl_pressure_grad_in);
      -
      253  for(int i = 0; i < AMREX_SPACEDIM; ++i) abl_pressure_grad[i] = abl_pressure_grad_in[i];
      -
      254 
      -
      255  amrex::Vector<amrex::Real> abl_geo_forcing_in = {0.0, 0.0, 0.0};
      -
      256  if(pp.queryarr("abl_geo_forcing",abl_geo_forcing_in)) {
      -
      257  amrex::Print() << "Specified abl_geo_forcing: (";
      -
      258  for (int i = 0; i < AMREX_SPACEDIM; ++i) {
      -
      259  abl_geo_forcing[i] = abl_geo_forcing_in[i];
      -
      260  amrex::Print() << abl_geo_forcing[i] << " ";
      -
      261  }
      -
      262  amrex::Print() << ")" << std::endl;
      -
      263  }
      -
      264 
      -
      265  if (use_coriolis)
      -
      266  {
      -
      267  build_coriolis_forcings();
      -
      268  }
      -
      269 
      -
      270  pp.query("add_custom_rhotheta_forcing", custom_rhotheta_forcing);
      -
      271  pp.query("add_custom_moisture_forcing", custom_moisture_forcing);
      -
      272  pp.query("add_custom_w_subsidence", custom_w_subsidence);
      -
      273  pp.query("add_custom_geostrophic_profile", custom_geostrophic_profile);
      -
      274  pp.query("custom_forcing_uses_primitive_vars", custom_forcing_prim_vars);
      -
      275 
      -
      276  pp.query("nudging_from_input_sounding", nudging_from_input_sounding);
      -
      277 
      -
      278  have_geo_wind_profile = (!abl_geo_wind_table.empty() || custom_geostrophic_profile);
      -
      279  AMREX_ALWAYS_ASSERT_WITH_MESSAGE(!(!abl_geo_wind_table.empty() && custom_geostrophic_profile),
      -
      280  "Should not have both abl_geo_wind_table and custom_geostrophic_profile set.");
      -
      281 
      -
      282  pp.query("Ave_Plane", ave_plane);
      -
      283 
      -
      284  pp.query("mp_clouds", do_cloud);
      -
      285  pp.query("mp_precip", do_precip);
      -
      286  pp.query("use_moist_background", use_moist_background);
      -
      287 
      -
      288  // Use numerical diffusion?
      -
      289  pp.query("use_NumDiff",use_NumDiff);
      -
      290  if(use_NumDiff) {
      -
      291  pp.query("NumDiffCoeff",NumDiffCoeff);
      -
      292  AMREX_ASSERT_WITH_MESSAGE(( (NumDiffCoeff >= 0.) && (NumDiffCoeff <= 1.) ),
      -
      293  "Numerical diffusion coefficient must be between 0 & 1.");
      -
      294  NumDiffCoeff *= std::pow(2.0,-6);
      -
      295  }
      -
      296 
      -
      297  // Use monotonic advection?
      -
      298  pp.query("use_mono_adv",use_mono_adv);
      -
      299 
      -
      300  advChoice.init_params();
      -
      301  diffChoice.init_params();
      -
      302  spongeChoice.init_params();
      -
      303 
      -
      304  turbChoice.resize(max_level+1);
      -
      305  for (int lev = 0; lev <= max_level; lev++) {
      -
      306  turbChoice[lev].init_params(lev,max_level);
      -
      307  }
      -
      308 
      -
      309  // YSU PBL: use consistent coriolis frequency
      -
      310  for (int lev = 0; lev <= max_level; lev++) {
      -
      311  if (turbChoice[lev].pbl_ysu_use_consistent_coriolis) {
      -
      312  if (use_coriolis) {
      -
      313  turbChoice[lev].pbl_ysu_coriolis_freq = coriolis_factor * sinphi;
      -
      314  if (lev == 0) {
      -
      315  amrex::Print() << "YSU PBL using ERF coriolis frequency: " << turbChoice[lev].pbl_ysu_coriolis_freq << std::endl;
      -
      316  }
      -
      317  } else {
      -
      318  amrex::Abort("YSU cannot use ERF coriolis frequency if not using coriolis");
      -
      319  }
      -
      320  }
      -
      321  }
      -
      322 
      +
      129  moisture_type == MoistureType::SAM_NoPrecip_NoIce)
      +
      130  {
      +
      131  buoyancy_type = 1; // uses Rhoprime
      +
      132  } else {
      +
      133  buoyancy_type = 2; // uses Tprime
      +
      134  }
      +
      135  }
      +
      136 
      +
      137  // Which expression (1,2/3 or 4) to use for buoyancy
      +
      138  pp.query("buoyancy_type", buoyancy_type);
      +
      139 
      +
      140  // What type of land surface model to use
      +
      141  lsm_type = LandSurfaceType::None; // Default
      +
      142  pp.query_enum_case_insensitive("land_surface_model",lsm_type);
      +
      143 
      +
      144  // Is the terrain none, static or moving?
      +
      145  pp.query_enum_case_insensitive("terrain_type",terrain_type);
      +
      146 
      +
      147  // Use lagged_delta_rt in the fast integrator?
      +
      148  pp.query("use_lagged_delta_rt", use_lagged_delta_rt);
      +
      149 
      +
      150  // These default to true but are used for unit testing
      +
      151  pp.query("use_gravity", use_gravity);
      +
      152  gravity = use_gravity? CONST_GRAV: 0.0;
      +
      153 
      +
      154  pp.query("c_p", c_p);
      +
      155  rdOcp = R_d / c_p;
      +
      156 
      +
      157  read_int_string(max_level, "anelastic", anelastic, 0);
      +
      158 
      +
      159  // *******************************************************************************
      +
      160  // Read substepping_type and allow for different values at each level
      +
      161  // *******************************************************************************
      +
      162  substepping_type.resize(max_level+1);
      +
      163 
      +
      164  for (int i = 0; i <= max_level; i++) {
      +
      165  substepping_type[i] = SubsteppingType::Implicit;
      +
      166  }
      +
      167 
      +
      168  int nvals = pp.countval("substepping_type");
      +
      169  AMREX_ALWAYS_ASSERT(nvals == 0 || nvals == 1 || nvals >= max_level+1);
      +
      170 
      +
      171  if (nvals == 1) {
      +
      172  pp.query_enum_case_insensitive("substepping_type",substepping_type[0]);
      +
      173  for (int i = 1; i <= max_level; i++) {
      +
      174  substepping_type[i] = substepping_type[0];
      +
      175  }
      +
      176  } else if (nvals > 1) { // in this case we have asserted nvals >= max_level+1
      +
      177  for (int i = 0; i <= max_level; i++) {
      +
      178  pp.query_enum_case_insensitive("substepping_type",substepping_type[i],i);
      +
      179  }
      +
      180  }
      +
      181 
      +
      182  // *******************************************************************************
      +
      183  // Error check on deprecated input
      +
      184  // *******************************************************************************
      +
      185  int nvals_old = pp.countval("no_substepping");
      +
      186  if (nvals_old > 0) {
      +
      187  amrex::Abort("The no_substepping flag is deprecated -- set substepping_type instead");
      +
      188  }
      +
      189  // *******************************************************************************
      +
      190 
      +
      191  bool any_anelastic = false;
      +
      192  for (int i = 0; i <= max_level; ++i) {
      +
      193  if (anelastic[i] == 1) any_anelastic = true;
      +
      194  }
      +
      195 
      +
      196  // If anelastic at all, we do not advect rho -- it is always == rho0
      +
      197  if (any_anelastic == 1) {
      +
      198  constant_density = true;
      +
      199  project_initial_velocity = true;
      +
      200  buoyancy_type = 3; // (This isn't actually used when anelastic is set)
      +
      201  } else {
      +
      202  pp.query("project_initial_velocity", project_initial_velocity);
      +
      203 
      +
      204  constant_density = false; // We default to false but allow the user to set it
      +
      205  pp.query("constant_density", constant_density);
      +
      206  }
      +
      207 
      +
      208  // *******************************************************************************
      +
      209 
      +
      210  pp.query("ncorr", ncorr);
      +
      211  pp.query("poisson_abstol", poisson_abstol);
      +
      212  pp.query("poisson_reltol", poisson_reltol);
      +
      213 
      +
      214  for (int lev = 0; lev <= max_level; lev++) {
      +
      215  if (anelastic[lev] != 0)
      +
      216  {
      +
      217  substepping_type[lev] = SubsteppingType::None;
      +
      218  }
      +
      219  }
      +
      220 
      +
      221  pp.query("force_stage1_single_substep", force_stage1_single_substep);
      +
      222 
      +
      223  // Include Coriolis forcing?
      +
      224  pp.query("use_coriolis", use_coriolis);
      +
      225 
      +
      226  // Include Rayleigh damping (separate flags for each variable)
      +
      227  pp.query("rayleigh_damp_U", rayleigh_damp_U);
      +
      228  pp.query("rayleigh_damp_V", rayleigh_damp_V);
      +
      229  pp.query("rayleigh_damp_W", rayleigh_damp_W);
      +
      230  pp.query("rayleigh_damp_T", rayleigh_damp_T);
      +
      231  pp.query("rayleigh_dampcoef", rayleigh_dampcoef);
      +
      232  pp.query("rayleigh_zdamp", rayleigh_zdamp);
      +
      233 
      +
      234  // Flag to do explicit MOST formulation
      +
      235  pp.query("use_explicit_most",use_explicit_most);
      +
      236 
      +
      237  // Flag to do MOST rotations with terrain
      +
      238  pp.query("use_rotate_most",use_rotate_most);
      +
      239  if (use_rotate_most) {
      +
      240  AMREX_ASSERT_WITH_MESSAGE(terrain_type != TerrainType::None,"MOST stress rotations are only valid with terrain!");
      +
      241  AMREX_ASSERT_WITH_MESSAGE(use_explicit_most, "MOST Stress rotations are only valid with explicit MOST!");
      +
      242  }
      +
      243 
      +
      244  // Which external forcings?
      +
      245  abl_driver_type = ABLDriverType::None; // Default: no ABL driver for simulating classical fluid dynamics problems
      +
      246  pp.query_enum_case_insensitive("abl_driver_type",abl_driver_type);
      +
      247 
      +
      248  // Which type of inflow turbulent generation
      +
      249  pert_type = PerturbationType::None; // Default
      +
      250  pp.query_enum_case_insensitive("perturbation_type",pert_type);
      +
      251 
      +
      252  amrex::Vector<amrex::Real> abl_pressure_grad_in = {0.0, 0.0, 0.0};
      +
      253  pp.queryarr("abl_pressure_grad",abl_pressure_grad_in);
      +
      254  for(int i = 0; i < AMREX_SPACEDIM; ++i) abl_pressure_grad[i] = abl_pressure_grad_in[i];
      +
      255 
      +
      256  amrex::Vector<amrex::Real> abl_geo_forcing_in = {0.0, 0.0, 0.0};
      +
      257  if(pp.queryarr("abl_geo_forcing",abl_geo_forcing_in)) {
      +
      258  amrex::Print() << "Specified abl_geo_forcing: (";
      +
      259  for (int i = 0; i < AMREX_SPACEDIM; ++i) {
      +
      260  abl_geo_forcing[i] = abl_geo_forcing_in[i];
      +
      261  amrex::Print() << abl_geo_forcing[i] << " ";
      +
      262  }
      +
      263  amrex::Print() << ")" << std::endl;
      +
      264  }
      +
      265 
      +
      266  if (use_coriolis)
      +
      267  {
      +
      268  build_coriolis_forcings();
      +
      269  }
      +
      270 
      +
      271  pp.query("add_custom_rhotheta_forcing", custom_rhotheta_forcing);
      +
      272  pp.query("add_custom_moisture_forcing", custom_moisture_forcing);
      +
      273  pp.query("add_custom_w_subsidence", custom_w_subsidence);
      +
      274  pp.query("add_custom_geostrophic_profile", custom_geostrophic_profile);
      +
      275  pp.query("custom_forcing_uses_primitive_vars", custom_forcing_prim_vars);
      +
      276 
      +
      277  pp.query("nudging_from_input_sounding", nudging_from_input_sounding);
      +
      278 
      +
      279  have_geo_wind_profile = (!abl_geo_wind_table.empty() || custom_geostrophic_profile);
      +
      280  AMREX_ALWAYS_ASSERT_WITH_MESSAGE(!(!abl_geo_wind_table.empty() && custom_geostrophic_profile),
      +
      281  "Should not have both abl_geo_wind_table and custom_geostrophic_profile set.");
      +
      282 
      +
      283  pp.query("Ave_Plane", ave_plane);
      +
      284 
      +
      285  pp.query("mp_clouds", do_cloud);
      +
      286  pp.query("mp_precip", do_precip);
      +
      287  pp.query("use_moist_background", use_moist_background);
      +
      288 
      +
      289  // Use numerical diffusion?
      +
      290  pp.query("use_NumDiff",use_NumDiff);
      +
      291  if(use_NumDiff) {
      +
      292  pp.query("NumDiffCoeff",NumDiffCoeff);
      +
      293  AMREX_ASSERT_WITH_MESSAGE(( (NumDiffCoeff >= 0.) && (NumDiffCoeff <= 1.) ),
      +
      294  "Numerical diffusion coefficient must be between 0 & 1.");
      +
      295  NumDiffCoeff *= std::pow(2.0,-6);
      +
      296  }
      +
      297 
      +
      298  // Use monotonic advection?
      +
      299  pp.query("use_mono_adv",use_mono_adv);
      +
      300 
      +
      301  advChoice.init_params();
      +
      302  diffChoice.init_params();
      +
      303  spongeChoice.init_params();
      +
      304 
      +
      305  turbChoice.resize(max_level+1);
      +
      306  for (int lev = 0; lev <= max_level; lev++) {
      +
      307  turbChoice[lev].init_params(lev,max_level);
      +
      308  }
      +
      309 
      +
      310  // YSU PBL: use consistent coriolis frequency
      +
      311  for (int lev = 0; lev <= max_level; lev++) {
      +
      312  if (turbChoice[lev].pbl_ysu_use_consistent_coriolis) {
      +
      313  if (use_coriolis) {
      +
      314  turbChoice[lev].pbl_ysu_coriolis_freq = coriolis_factor * sinphi;
      +
      315  if (lev == 0) {
      +
      316  amrex::Print() << "YSU PBL using ERF coriolis frequency: " << turbChoice[lev].pbl_ysu_coriolis_freq << std::endl;
      +
      317  }
      +
      318  } else {
      +
      319  amrex::Abort("YSU cannot use ERF coriolis frequency if not using coriolis");
      +
      320  }
      +
      321  }
      +
      322  }
      323 
      -
      324  // Which type of multilevel coupling
      -
      325  coupling_type = CouplingType::TwoWay; // Default
      -
      326  pp.query_enum_case_insensitive("coupling_type",coupling_type);
      -
      327 
      -
      328  // Which type of windfarm model
      -
      329  windfarm_type = WindFarmType::None; // Default
      -
      330  pp.query_enum_case_insensitive("windfarm_type",windfarm_type);
      -
      331 
      -
      332  static std::string windfarm_loc_type_string = "None";
      -
      333  windfarm_loc_type = WindFarmLocType::None;
      -
      334  pp.query_enum_case_insensitive("windfarm_loc_type",windfarm_loc_type);
      -
      335 
      -
      336  pp.query("windfarm_loc_table", windfarm_loc_table);
      -
      337  pp.query("windfarm_spec_table", windfarm_spec_table);
      -
      338  pp.query("windfarm_blade_table", windfarm_blade_table);
      -
      339  pp.query("windfarm_airfoil_tables", windfarm_airfoil_tables);
      -
      340  pp.query("windfarm_spec_table_extra", windfarm_spec_table_extra);
      -
      341 
      -
      342  // Sampling distance upstream of the turbine to find the
      -
      343  // incoming free stream velocity as a factor of the diameter of the
      -
      344  // turbine. ie. the sampling distance will be this number multiplied
      -
      345  // by the diameter of the turbine
      -
      346  pp.query("sampling_distance_by_D", sampling_distance_by_D);
      -
      347  pp.query("turb_disk_angle_from_x", turb_disk_angle);
      -
      348 
      -
      349  pp.query("windfarm_x_shift",windfarm_x_shift);
      -
      350  pp.query("windfarm_y_shift",windfarm_y_shift);
      -
      351  // Test if time averaged data is to be output
      -
      352  pp.query("time_avg_vel",time_avg_vel);
      -
      353 
      -
      354  check_params(max_level);
      -
      355  }
      +
      324 
      +
      325  // Which type of multilevel coupling
      +
      326  coupling_type = CouplingType::TwoWay; // Default
      +
      327  pp.query_enum_case_insensitive("coupling_type",coupling_type);
      +
      328 
      +
      329  // Which type of windfarm model
      +
      330  windfarm_type = WindFarmType::None; // Default
      +
      331  pp.query_enum_case_insensitive("windfarm_type",windfarm_type);
      +
      332 
      +
      333  static std::string windfarm_loc_type_string = "None";
      +
      334  windfarm_loc_type = WindFarmLocType::None;
      +
      335  pp.query_enum_case_insensitive("windfarm_loc_type",windfarm_loc_type);
      +
      336 
      +
      337  pp.query("windfarm_loc_table", windfarm_loc_table);
      +
      338  pp.query("windfarm_spec_table", windfarm_spec_table);
      +
      339  pp.query("windfarm_blade_table", windfarm_blade_table);
      +
      340  pp.query("windfarm_airfoil_tables", windfarm_airfoil_tables);
      +
      341  pp.query("windfarm_spec_table_extra", windfarm_spec_table_extra);
      +
      342 
      +
      343  // Sampling distance upstream of the turbine to find the
      +
      344  // incoming free stream velocity as a factor of the diameter of the
      +
      345  // turbine. ie. the sampling distance will be this number multiplied
      +
      346  // by the diameter of the turbine
      +
      347  pp.query("sampling_distance_by_D", sampling_distance_by_D);
      +
      348  pp.query("turb_disk_angle_from_x", turb_disk_angle);
      +
      349 
      +
      350  pp.query("windfarm_x_shift",windfarm_x_shift);
      +
      351  pp.query("windfarm_y_shift",windfarm_y_shift);
      +
      352  // Test if time averaged data is to be output
      +
      353  pp.query("time_avg_vel",time_avg_vel);
      +
      354 
      +
      355  check_params(max_level);
      +
      356  }
      CONST_GRAV
      constexpr amrex::Real CONST_GRAV
      Definition: ERF_Constants.H:21
      R_d
      constexpr amrex::Real R_d
      Definition: ERF_Constants.H:10
      RhoQ4_comp
      #define RhoQ4_comp
      Definition: ERF_IndexDefines.H:45
      @@ -903,53 +904,53 @@

      RhoQ1_comp
      #define RhoQ1_comp
      Definition: ERF_IndexDefines.H:42

      AdvChoice::init_params
      void init_params()
      Definition: ERF_AdvStruct.H:21
      DiffChoice::init_params
      void init_params()
      Definition: ERF_DiffStruct.H:21
      -
      SolverChoice::rayleigh_damp_T
      bool rayleigh_damp_T
      Definition: ERF_DataStruct.H:561
      -
      SolverChoice::dz0
      amrex::Real dz0
      Definition: ERF_DataStruct.H:577
      -
      SolverChoice::use_explicit_most
      bool use_explicit_most
      Definition: ERF_DataStruct.H:598
      -
      SolverChoice::rayleigh_damp_V
      bool rayleigh_damp_V
      Definition: ERF_DataStruct.H:559
      -
      SolverChoice::RhoQr_comp
      int RhoQr_comp
      Definition: ERF_DataStruct.H:639
      -
      SolverChoice::poisson_reltol
      amrex::Real poisson_reltol
      Definition: ERF_DataStruct.H:547
      -
      SolverChoice::rayleigh_zdamp
      amrex::Real rayleigh_zdamp
      Definition: ERF_DataStruct.H:563
      -
      SolverChoice::rdOcp
      amrex::Real rdOcp
      Definition: ERF_DataStruct.H:572
      -
      SolverChoice::read_int_string
      void read_int_string(int max_level, const char *string_to_read, amrex::Vector< int > &vec_to_fill, int default_int)
      Definition: ERF_DataStruct.H:502
      -
      SolverChoice::windfarm_spec_table
      std::string windfarm_spec_table
      Definition: ERF_DataStruct.H:641
      -
      SolverChoice::use_mono_adv
      bool use_mono_adv
      Definition: ERF_DataStruct.H:614
      -
      SolverChoice::build_coriolis_forcings
      void build_coriolis_forcings()
      Definition: ERF_DataStruct.H:459
      -
      SolverChoice::ncorr
      int ncorr
      Definition: ERF_DataStruct.H:545
      -
      SolverChoice::windfarm_spec_table_extra
      std::string windfarm_spec_table_extra
      Definition: ERF_DataStruct.H:641
      -
      SolverChoice::lsm_type
      LandSurfaceType lsm_type
      Definition: ERF_DataStruct.H:620
      -
      SolverChoice::c_p
      amrex::Real c_p
      Definition: ERF_DataStruct.H:571
      -
      SolverChoice::windfarm_loc_table
      std::string windfarm_loc_table
      Definition: ERF_DataStruct.H:641
      -
      SolverChoice::gravity
      amrex::Real gravity
      Definition: ERF_DataStruct.H:570
      -
      SolverChoice::check_params
      void check_params(int max_level)
      Definition: ERF_DataStruct.H:357
      -
      SolverChoice::custom_rhotheta_forcing
      bool custom_rhotheta_forcing
      Definition: ERF_DataStruct.H:587
      -
      SolverChoice::custom_w_subsidence
      bool custom_w_subsidence
      Definition: ERF_DataStruct.H:589
      -
      SolverChoice::nudging_from_input_sounding
      bool nudging_from_input_sounding
      Definition: ERF_DataStruct.H:595
      -
      SolverChoice::rayleigh_damp_U
      bool rayleigh_damp_U
      Definition: ERF_DataStruct.H:558
      -
      SolverChoice::custom_geostrophic_profile
      bool custom_geostrophic_profile
      Definition: ERF_DataStruct.H:590
      -
      SolverChoice::grid_stretching_ratio
      amrex::Real grid_stretching_ratio
      Definition: ERF_DataStruct.H:575
      -
      SolverChoice::have_geo_wind_profile
      bool have_geo_wind_profile
      Definition: ERF_DataStruct.H:626
      -
      SolverChoice::NumDiffCoeff
      amrex::Real NumDiffCoeff
      Definition: ERF_DataStruct.H:611
      -
      SolverChoice::do_precip
      bool do_precip
      Definition: ERF_DataStruct.H:631
      -
      SolverChoice::RhoQv_comp
      int RhoQv_comp
      Definition: ERF_DataStruct.H:633
      -
      SolverChoice::test_mapfactor
      bool test_mapfactor
      Definition: ERF_DataStruct.H:549
      -
      SolverChoice::use_NumDiff
      bool use_NumDiff
      Definition: ERF_DataStruct.H:610
      -
      SolverChoice::custom_moisture_forcing
      bool custom_moisture_forcing
      Definition: ERF_DataStruct.H:588
      -
      SolverChoice::windfarm_blade_table
      std::string windfarm_blade_table
      Definition: ERF_DataStruct.H:642
      -
      SolverChoice::zsurf
      amrex::Real zsurf
      Definition: ERF_DataStruct.H:576
      -
      SolverChoice::project_initial_velocity
      bool project_initial_velocity
      Definition: ERF_DataStruct.H:579
      -
      SolverChoice::constant_density
      int constant_density
      Definition: ERF_DataStruct.H:544
      -
      SolverChoice::use_moist_background
      bool use_moist_background
      Definition: ERF_DataStruct.H:632
      -
      SolverChoice::custom_forcing_prim_vars
      bool custom_forcing_prim_vars
      Definition: ERF_DataStruct.H:591
      -
      SolverChoice::rayleigh_damp_W
      bool rayleigh_damp_W
      Definition: ERF_DataStruct.H:560
      -
      SolverChoice::pert_type
      PerturbationType pert_type
      Definition: ERF_DataStruct.H:607
      -
      SolverChoice::poisson_abstol
      amrex::Real poisson_abstol
      Definition: ERF_DataStruct.H:546
      -
      SolverChoice::time_avg_vel
      bool time_avg_vel
      Definition: ERF_DataStruct.H:604
      -
      SolverChoice::do_cloud
      bool do_cloud
      Definition: ERF_DataStruct.H:630
      -
      SolverChoice::use_rotate_most
      bool use_rotate_most
      Definition: ERF_DataStruct.H:601
      -
      SolverChoice::rayleigh_dampcoef
      amrex::Real rayleigh_dampcoef
      Definition: ERF_DataStruct.H:562
      -
      SolverChoice::windfarm_airfoil_tables
      std::string windfarm_airfoil_tables
      Definition: ERF_DataStruct.H:642
      -
      SolverChoice::ave_plane
      int ave_plane
      Definition: ERF_DataStruct.H:628
      +
      SolverChoice::rayleigh_damp_T
      bool rayleigh_damp_T
      Definition: ERF_DataStruct.H:562
      +
      SolverChoice::dz0
      amrex::Real dz0
      Definition: ERF_DataStruct.H:578
      +
      SolverChoice::use_explicit_most
      bool use_explicit_most
      Definition: ERF_DataStruct.H:599
      +
      SolverChoice::rayleigh_damp_V
      bool rayleigh_damp_V
      Definition: ERF_DataStruct.H:560
      +
      SolverChoice::RhoQr_comp
      int RhoQr_comp
      Definition: ERF_DataStruct.H:640
      +
      SolverChoice::poisson_reltol
      amrex::Real poisson_reltol
      Definition: ERF_DataStruct.H:548
      +
      SolverChoice::rayleigh_zdamp
      amrex::Real rayleigh_zdamp
      Definition: ERF_DataStruct.H:564
      +
      SolverChoice::rdOcp
      amrex::Real rdOcp
      Definition: ERF_DataStruct.H:573
      +
      SolverChoice::read_int_string
      void read_int_string(int max_level, const char *string_to_read, amrex::Vector< int > &vec_to_fill, int default_int)
      Definition: ERF_DataStruct.H:503
      +
      SolverChoice::windfarm_spec_table
      std::string windfarm_spec_table
      Definition: ERF_DataStruct.H:642
      +
      SolverChoice::use_mono_adv
      bool use_mono_adv
      Definition: ERF_DataStruct.H:615
      +
      SolverChoice::build_coriolis_forcings
      void build_coriolis_forcings()
      Definition: ERF_DataStruct.H:460
      +
      SolverChoice::ncorr
      int ncorr
      Definition: ERF_DataStruct.H:546
      +
      SolverChoice::windfarm_spec_table_extra
      std::string windfarm_spec_table_extra
      Definition: ERF_DataStruct.H:642
      +
      SolverChoice::lsm_type
      LandSurfaceType lsm_type
      Definition: ERF_DataStruct.H:621
      +
      SolverChoice::c_p
      amrex::Real c_p
      Definition: ERF_DataStruct.H:572
      +
      SolverChoice::windfarm_loc_table
      std::string windfarm_loc_table
      Definition: ERF_DataStruct.H:642
      +
      SolverChoice::gravity
      amrex::Real gravity
      Definition: ERF_DataStruct.H:571
      +
      SolverChoice::check_params
      void check_params(int max_level)
      Definition: ERF_DataStruct.H:358
      +
      SolverChoice::custom_rhotheta_forcing
      bool custom_rhotheta_forcing
      Definition: ERF_DataStruct.H:588
      +
      SolverChoice::custom_w_subsidence
      bool custom_w_subsidence
      Definition: ERF_DataStruct.H:590
      +
      SolverChoice::nudging_from_input_sounding
      bool nudging_from_input_sounding
      Definition: ERF_DataStruct.H:596
      +
      SolverChoice::rayleigh_damp_U
      bool rayleigh_damp_U
      Definition: ERF_DataStruct.H:559
      +
      SolverChoice::custom_geostrophic_profile
      bool custom_geostrophic_profile
      Definition: ERF_DataStruct.H:591
      +
      SolverChoice::grid_stretching_ratio
      amrex::Real grid_stretching_ratio
      Definition: ERF_DataStruct.H:576
      +
      SolverChoice::have_geo_wind_profile
      bool have_geo_wind_profile
      Definition: ERF_DataStruct.H:627
      +
      SolverChoice::NumDiffCoeff
      amrex::Real NumDiffCoeff
      Definition: ERF_DataStruct.H:612
      +
      SolverChoice::do_precip
      bool do_precip
      Definition: ERF_DataStruct.H:632
      +
      SolverChoice::RhoQv_comp
      int RhoQv_comp
      Definition: ERF_DataStruct.H:634
      +
      SolverChoice::test_mapfactor
      bool test_mapfactor
      Definition: ERF_DataStruct.H:550
      +
      SolverChoice::use_NumDiff
      bool use_NumDiff
      Definition: ERF_DataStruct.H:611
      +
      SolverChoice::custom_moisture_forcing
      bool custom_moisture_forcing
      Definition: ERF_DataStruct.H:589
      +
      SolverChoice::windfarm_blade_table
      std::string windfarm_blade_table
      Definition: ERF_DataStruct.H:643
      +
      SolverChoice::zsurf
      amrex::Real zsurf
      Definition: ERF_DataStruct.H:577
      +
      SolverChoice::project_initial_velocity
      bool project_initial_velocity
      Definition: ERF_DataStruct.H:580
      +
      SolverChoice::constant_density
      int constant_density
      Definition: ERF_DataStruct.H:545
      +
      SolverChoice::use_moist_background
      bool use_moist_background
      Definition: ERF_DataStruct.H:633
      +
      SolverChoice::custom_forcing_prim_vars
      bool custom_forcing_prim_vars
      Definition: ERF_DataStruct.H:592
      +
      SolverChoice::rayleigh_damp_W
      bool rayleigh_damp_W
      Definition: ERF_DataStruct.H:561
      +
      SolverChoice::pert_type
      PerturbationType pert_type
      Definition: ERF_DataStruct.H:608
      +
      SolverChoice::poisson_abstol
      amrex::Real poisson_abstol
      Definition: ERF_DataStruct.H:547
      +
      SolverChoice::time_avg_vel
      bool time_avg_vel
      Definition: ERF_DataStruct.H:605
      +
      SolverChoice::do_cloud
      bool do_cloud
      Definition: ERF_DataStruct.H:631
      +
      SolverChoice::use_rotate_most
      bool use_rotate_most
      Definition: ERF_DataStruct.H:602
      +
      SolverChoice::rayleigh_dampcoef
      amrex::Real rayleigh_dampcoef
      Definition: ERF_DataStruct.H:563
      +
      SolverChoice::windfarm_airfoil_tables
      std::string windfarm_airfoil_tables
      Definition: ERF_DataStruct.H:643
      +
      SolverChoice::ave_plane
      int ave_plane
      Definition: ERF_DataStruct.H:629
      SpongeChoice::init_params
      void init_params()
      Definition: ERF_SpongeStruct.H:17
      Here is the call graph for this function:
      @@ -1015,20 +1016,20 @@

      -
      504  {
      -
      505  amrex::ParmParse pp("erf");
      -
      506  int nvals = pp.countval(string_to_read);
      -
      507  AMREX_ALWAYS_ASSERT(nvals == 0 || nvals == 1 || nvals >= max_level+1);
      -
      508  amrex::Vector<int> temp; temp.resize(nvals);
      -
      509  pp.queryarr(string_to_read,temp);
      -
      510  if (nvals == 0) {
      -
      511  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(default_int);
      -
      512  } else if (nvals == 1) {
      -
      513  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(temp[0]);
      -
      514  } else {
      -
      515  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(temp[i]);
      -
      516  }
      -
      517  }
      +
      505  {
      +
      506  amrex::ParmParse pp("erf");
      +
      507  int nvals = pp.countval(string_to_read);
      +
      508  AMREX_ALWAYS_ASSERT(nvals == 0 || nvals == 1 || nvals >= max_level+1);
      +
      509  amrex::Vector<int> temp; temp.resize(nvals);
      +
      510  pp.queryarr(string_to_read,temp);
      +
      511  if (nvals == 0) {
      +
      512  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(default_int);
      +
      513  } else if (nvals == 1) {
      +
      514  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(temp[0]);
      +
      515  } else {
      +
      516  for (int i = 0; i <= max_level; ++i) vec_to_fill.push_back(temp[i]);
      +
      517  }
      +
      518  }

      Referenced by init_params().

      @@ -1074,10 +1075,10 @@

      -
      527  {
      -
      528  terrain_is_flat = true;
      -
      529  }
      -
      SolverChoice::terrain_is_flat
      static bool terrain_is_flat
      Definition: ERF_DataStruct.H:520
      +
      528  {
      +
      529  terrain_is_flat = true;
      +
      530  }
      +
      SolverChoice::terrain_is_flat
      static bool terrain_is_flat
      Definition: ERF_DataStruct.H:521

      Referenced by ProblemBase::init_custom_terrain().

      @@ -1201,7 +1202,7 @@

      -

      Referenced by Kessler::Define(), SAM::Define(), init_params(), make_buoyancy(), make_mom_sources(), and make_sources().

      +

      Referenced by Kessler::Define(), SAM::Define(), init_params(), make_mom_sources(), and make_sources().

AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_type4 AMREX_GPU_DEVICE AMREX_FORCE_INLINE amrex::Real buoyancy_rhopert ( int &  i, grav_gpu,
amrex::Real * rho_d_ptr,
amrex::Real * theta_d_ptr,
amrex::Real * qv_d_ptr,
amrex::Real * qc_d_ptr,
amrex::Real * qp_d_ptr,
const amrex::Array4< const amrex::Real > & cell_prim, r0_arr,