From 3de13bcac602ad472913b09f45462683c8ab1432 Mon Sep 17 00:00:00 2001
From: GitHub Actions <actions@github.com>
Date: Tue, 10 Dec 2024 00:50:27 +0000
Subject: [PATCH] site deploy

Auto-generated via `{sandpaper}`
Source  : e72eb7dec925b333e18feeaae65bf0aca7bd8270
Branch  : md-outputs
Author  : GitHub Actions <actions@github.com>
Time    : 2024-12-03 14:53:22 +0000
Message : markdown source builds

Auto-generated via `{sandpaper}`
Source  : 7452613963e7fc5af457f7ce0bd5fcc5ed0cb875
Branch  : main
Author  : Eduard Klapwijk <41283173+eduardklap@users.noreply.github.com>
Time    : 2024-12-03 14:52:41 +0000
Message : add renv::init() command to instructions
---
 404.html                              |  4 ++--
 CODE_OF_CONDUCT.html                  |  2 +-
 LICENSE.html                          |  2 +-
 aio.html                              | 26 +++++++++++++-------------
 documentation.html                    |  2 +-
 further-improvements.html             |  2 +-
 github.html                           |  2 +-
 good-code.html                        | 10 +++++-----
 images.html                           |  4 ++--
 index.html                            |  4 ++--
 instructor-notes.html                 |  4 ++--
 instructor/404.html                   |  4 ++--
 instructor/CODE_OF_CONDUCT.html       |  2 +-
 instructor/LICENSE.html               |  2 +-
 instructor/aio.html                   | 26 +++++++++++++-------------
 instructor/documentation.html         |  2 +-
 instructor/further-improvements.html  |  2 +-
 instructor/github.html                |  2 +-
 instructor/good-code.html             | 10 +++++-----
 instructor/images.html                |  4 ++--
 instructor/index.html                 |  4 ++--
 instructor/instructor-notes.html      |  4 ++--
 instructor/key-points.html            |  4 ++--
 instructor/profiles.html              |  4 ++--
 instructor/reference.html             |  2 +-
 instructor/reusability-check.html     |  2 +-
 instructor/software-dependencies.html | 16 ++++++++--------
 key-points.html                       |  4 ++--
 pkgdown.yml                           |  2 +-
 profiles.html                         |  4 ++--
 reference.html                        |  2 +-
 reusability-check.html                |  2 +-
 software-dependencies.html            | 16 ++++++++--------
 33 files changed, 91 insertions(+), 91 deletions(-)

diff --git a/404.html b/404.html
index 3f06966..ed8c94b 100644
--- a/404.html
+++ b/404.html
@@ -376,8 +376,8 @@ <h1>Page not found</h1>
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/404.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/404.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/CODE_OF_CONDUCT.html b/CODE_OF_CONDUCT.html
index 31e1493..1dec9f9 100644
--- a/CODE_OF_CONDUCT.html
+++ b/CODE_OF_CONDUCT.html
@@ -399,7 +399,7 @@ <h1>Contributor Code of Conduct</h1>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/CODE_OF_CONDUCT.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-11-27",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/LICENSE.html b/LICENSE.html
index c23850e..b485479 100644
--- a/LICENSE.html
+++ b/LICENSE.html
@@ -447,7 +447,7 @@ <h1>Licenses</h1>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/LICENSE.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-11-27",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/aio.html b/aio.html
index ac86a33..2df2068 100644
--- a/aio.html
+++ b/aio.html
@@ -691,7 +691,7 @@ <h3 class="tab-header" id="nav-tab-heading-1-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-1" class="tab-content">
-<div id="nav-tabpanel-1-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-1-Pythonvirtualenv">
+<div id="nav-tabpanel-1-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-1-Pythonvirtualenv" role="tabpanel">
 <p><strong>A</strong>: You find a couple of library imports across the
 code but that’s it.</p>
 <p><strong>B</strong>: The README file lists which libraries were used
@@ -724,7 +724,7 @@ <h3 class="tab-header" id="nav-tab-heading-1-R">
 someproject==1.2.3
 anotherproject==2.3.4</code></pre>
 </div>
-<div id="nav-tabpanel-1-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-1-R">
+<div id="nav-tabpanel-1-R" class="tab-pane" aria-labelledby="nav-tab-1-R" role="tabpanel">
 <p><strong>A</strong>: You find a couple of <code>library()</code> or
 <code>require()</code> calls across the code but that’s it.</p>
 <p><strong>B</strong>: The README file lists which libraries were used
@@ -773,7 +773,7 @@ <h3 class="code-label">R<i aria-hidden="true" data-feather="chevron-left"></i><i
 <button class="accordion-button solution-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#collapseSolution1" aria-expanded="false" aria-controls="collapseSolution1">
   <h4 class="accordion-header" id="headingSolution1"> Show me the solution </h4>
 </button>
-<div id="collapseSolution1" class="accordion-collapse collapse" data-bs-parent="#accordionSolution1" aria-labelledby="headingSolution1">
+<div id="collapseSolution1" class="accordion-collapse collapse" aria-labelledby="headingSolution1" data-bs-parent="#accordionSolution1">
 <div class="accordion-body">
 <p><strong>A</strong>: It will be tedious to collect the dependencies
 one by one. And after the tedious process you will still not know which
@@ -822,7 +822,7 @@ <h3 class="tab-header" id="nav-tab-heading-2-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-2" class="tab-content">
-<div id="nav-tabpanel-2-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-2-Pythonvirtualenv">
+<div id="nav-tabpanel-2-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-2-Pythonvirtualenv" role="tabpanel">
 <p>Try this in your own project:</p>
 <pre class="console"><code>$ pip freeze &gt; requirements.txt</code></pre>
 <p>Have a look at the generated file and discuss what you see.</p>
@@ -832,7 +832,7 @@ <h3 class="tab-header" id="nav-tab-heading-2-R">
 over to the <a href="https://carpentries-incubator.github.io/python-intermediate-development/12-virtual-environments/index.html#creating-virtual-environments-using-venv" target="_blank" class="external-link">Carpentries Intermediate Research Software Development
 Skills (Python)</a> lesson.</p>
 </div>
-<div id="nav-tabpanel-2-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-2-R">
+<div id="nav-tabpanel-2-R" class="tab-pane" aria-labelledby="nav-tab-2-R" role="tabpanel">
 <p>This example uses renv.</p>
 <p>First initialize renv (install the package if needed) using
 <code>renv::init()</code>. Then try to “save” and “load” the state of
@@ -870,7 +870,7 @@ <h3 class="tab-header" id="nav-tab-heading-3-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-3" class="tab-content">
-<div id="nav-tabpanel-3-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-3-Pythonvirtualenv">
+<div id="nav-tabpanel-3-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-3-Pythonvirtualenv" role="tabpanel">
 <ol style="list-style-type: decimal">
 <li>Mark your changes as staged:</li>
 </ol>
@@ -896,7 +896,7 @@ <h3 class="code-label">BASH<i aria-hidden="true" data-feather="chevron-left"></i
 <pre class="sourceCode bash" tabindex="0"><code class="sourceCode bash"><span id="cb13-1"><a href="#cb13-1" tabindex="-1"></a><span class="fu">git</span> push origin main</span></code></pre>
 </div>
 </div>
-<div id="nav-tabpanel-3-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-3-R">
+<div id="nav-tabpanel-3-R" class="tab-pane" aria-labelledby="nav-tab-3-R" role="tabpanel">
 <ol style="list-style-type: decimal">
 <li>Mark your changes as staged (share not only the lock file, but also
 the .RProfile and activate.R files needed to recreate the
@@ -1641,7 +1641,7 @@ <h4 class="accordion-header" id="headingSolution1">
   Solution 1 - Basic
   </h4>
 </button>
-<div id="collapseSolution1" class="accordion-collapse collapse" data-bs-parent="#accordionSolution1" aria-labelledby="headingSolution1">
+<div id="collapseSolution1" class="accordion-collapse collapse" aria-labelledby="headingSolution1" data-bs-parent="#accordionSolution1">
 <div class="accordion-body">
 <div class="codewrapper sourceCode" id="cb14">
 <h3 class="code-label">PYTHON<i aria-hidden="true" data-feather="chevron-left"></i><i aria-hidden="true" data-feather="chevron-right"></i>
@@ -1790,7 +1790,7 @@ <h4 class="accordion-header" id="headingSolution2">
   Solution 2 - Advanced
   </h4>
 </button>
-<div id="collapseSolution2" class="accordion-collapse collapse" data-bs-parent="#accordionSolution2" aria-labelledby="headingSolution2">
+<div id="collapseSolution2" class="accordion-collapse collapse" aria-labelledby="headingSolution2" data-bs-parent="#accordionSolution2">
 <div class="accordion-body">
 <div class="codewrapper sourceCode" id="cb15">
 <h3 class="code-label">PYTHON<i aria-hidden="true" data-feather="chevron-left"></i><i aria-hidden="true" data-feather="chevron-right"></i>
@@ -1948,7 +1948,7 @@ <h4 class="accordion-header" id="headingSolution3">
   Solution to challenge 1
   </h4>
 </button>
-<div id="collapseSolution3" class="accordion-collapse collapse" data-bs-parent="#accordionSolution3" aria-labelledby="headingSolution3">
+<div id="collapseSolution3" class="accordion-collapse collapse" aria-labelledby="headingSolution3" data-bs-parent="#accordionSolution3">
 <div class="accordion-body">
 <p>Write a function called <code>kelvin_to_celsius</code> that takes a
 temperature in Kelvin and returns that temperature in Celsius</p>
@@ -2006,7 +2006,7 @@ <h4 class="accordion-header" id="headingSolution4">
   Solution to challenge 2
   </h4>
 </button>
-<div id="collapseSolution4" class="accordion-collapse collapse" data-bs-parent="#accordionSolution4" aria-labelledby="headingSolution4">
+<div id="collapseSolution4" class="accordion-collapse collapse" aria-labelledby="headingSolution4" data-bs-parent="#accordionSolution4">
 <div class="accordion-body">
 <p>Define the function to convert directly from Fahrenheit to Celsius,
 by reusing these two functions above</p>
@@ -2339,8 +2339,8 @@ <h3 class="callout-title">Key Points</h3>
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/aio.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/aio.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/documentation.html b/documentation.html
index 7d27e52..39de4f5 100644
--- a/documentation.html
+++ b/documentation.html
@@ -652,7 +652,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/documentation.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/further-improvements.html b/further-improvements.html
index aa6732b..d2e71c2 100644
--- a/further-improvements.html
+++ b/further-improvements.html
@@ -520,7 +520,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/further-improvements.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/github.html b/github.html
index 532d09d..9ddf24a 100644
--- a/github.html
+++ b/github.html
@@ -567,7 +567,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/github.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/good-code.html b/good-code.html
index 9d2a073..e79ebba 100644
--- a/good-code.html
+++ b/good-code.html
@@ -698,7 +698,7 @@ <h4 class="accordion-header" id="headingSolution1">
   Solution 1 - Basic
   </h4>
 </button>
-<div id="collapseSolution1" class="accordion-collapse collapse" data-bs-parent="#accordionSolution1" aria-labelledby="headingSolution1">
+<div id="collapseSolution1" class="accordion-collapse collapse" aria-labelledby="headingSolution1" data-bs-parent="#accordionSolution1">
 <div class="accordion-body">
 <div class="codewrapper sourceCode" id="cb14">
 <h3 class="code-label">PYTHON<i aria-hidden="true" data-feather="chevron-left"></i><i aria-hidden="true" data-feather="chevron-right"></i>
@@ -847,7 +847,7 @@ <h4 class="accordion-header" id="headingSolution2">
   Solution 2 - Advanced
   </h4>
 </button>
-<div id="collapseSolution2" class="accordion-collapse collapse" data-bs-parent="#accordionSolution2" aria-labelledby="headingSolution2">
+<div id="collapseSolution2" class="accordion-collapse collapse" aria-labelledby="headingSolution2" data-bs-parent="#accordionSolution2">
 <div class="accordion-body">
 <div class="codewrapper sourceCode" id="cb15">
 <h3 class="code-label">PYTHON<i aria-hidden="true" data-feather="chevron-left"></i><i aria-hidden="true" data-feather="chevron-right"></i>
@@ -1003,7 +1003,7 @@ <h4 class="accordion-header" id="headingSolution3">
   Solution to challenge 1
   </h4>
 </button>
-<div id="collapseSolution3" class="accordion-collapse collapse" data-bs-parent="#accordionSolution3" aria-labelledby="headingSolution3">
+<div id="collapseSolution3" class="accordion-collapse collapse" aria-labelledby="headingSolution3" data-bs-parent="#accordionSolution3">
 <div class="accordion-body">
 <p>Write a function called <code>kelvin_to_celsius</code> that takes a
 temperature in Kelvin and returns that temperature in Celsius</p>
@@ -1060,7 +1060,7 @@ <h4 class="accordion-header" id="headingSolution4">
   Solution to challenge 2
   </h4>
 </button>
-<div id="collapseSolution4" class="accordion-collapse collapse" data-bs-parent="#accordionSolution4" aria-labelledby="headingSolution4">
+<div id="collapseSolution4" class="accordion-collapse collapse" aria-labelledby="headingSolution4" data-bs-parent="#accordionSolution4">
 <div class="accordion-body">
 <p>Define the function to convert directly from Fahrenheit to Celsius,
 by reusing these two functions above</p>
@@ -1172,7 +1172,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/good-code.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/images.html b/images.html
index 0ce17ac..8ad980a 100644
--- a/images.html
+++ b/images.html
@@ -448,8 +448,8 @@ <h3 id="software-dependencies-figure-3">Figure 3</h3>
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/images.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/images.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/index.html b/index.html
index a59ad3b..67c959d 100644
--- a/index.html
+++ b/index.html
@@ -378,8 +378,8 @@ <h2 class="accordion-header" id="flush-headingTwelve">
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/index.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/index.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor-notes.html b/instructor-notes.html
index 621ddcf..fbfaf17 100644
--- a/instructor-notes.html
+++ b/instructor-notes.html
@@ -422,8 +422,8 @@ <h1>Instructor Notes</h1>
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor-notes.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor-notes.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/404.html b/instructor/404.html
index 94e004f..8890cd3 100644
--- a/instructor/404.html
+++ b/instructor/404.html
@@ -376,8 +376,8 @@ <h1>Page not found</h1>
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/404.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/404.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/CODE_OF_CONDUCT.html b/instructor/CODE_OF_CONDUCT.html
index 3c2cd17..4604834 100644
--- a/instructor/CODE_OF_CONDUCT.html
+++ b/instructor/CODE_OF_CONDUCT.html
@@ -401,7 +401,7 @@ <h1>Contributor Code of Conduct</h1>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/CODE_OF_CONDUCT.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-11-27",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/LICENSE.html b/instructor/LICENSE.html
index 0964d79..a4ece53 100644
--- a/instructor/LICENSE.html
+++ b/instructor/LICENSE.html
@@ -449,7 +449,7 @@ <h1>Licenses</h1>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/LICENSE.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-11-27",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/aio.html b/instructor/aio.html
index 731fe7a..ea5af4c 100644
--- a/instructor/aio.html
+++ b/instructor/aio.html
@@ -695,7 +695,7 @@ <h3 class="tab-header" id="nav-tab-heading-1-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-1" class="tab-content">
-<div id="nav-tabpanel-1-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-1-Pythonvirtualenv">
+<div id="nav-tabpanel-1-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-1-Pythonvirtualenv" role="tabpanel">
 <p><strong>A</strong>: You find a couple of library imports across the
 code but that’s it.</p>
 <p><strong>B</strong>: The README file lists which libraries were used
@@ -728,7 +728,7 @@ <h3 class="tab-header" id="nav-tab-heading-1-R">
 someproject==1.2.3
 anotherproject==2.3.4</code></pre>
 </div>
-<div id="nav-tabpanel-1-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-1-R">
+<div id="nav-tabpanel-1-R" class="tab-pane" aria-labelledby="nav-tab-1-R" role="tabpanel">
 <p><strong>A</strong>: You find a couple of <code>library()</code> or
 <code>require()</code> calls across the code but that’s it.</p>
 <p><strong>B</strong>: The README file lists which libraries were used
@@ -777,7 +777,7 @@ <h3 class="code-label">R<i aria-hidden="true" data-feather="chevron-left"></i><i
 <button class="accordion-button solution-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#collapseSolution1" aria-expanded="false" aria-controls="collapseSolution1">
   <h4 class="accordion-header" id="headingSolution1"> Show me the solution </h4>
 </button>
-<div id="collapseSolution1" class="accordion-collapse collapse" data-bs-parent="#accordionSolution1" aria-labelledby="headingSolution1">
+<div id="collapseSolution1" class="accordion-collapse collapse" aria-labelledby="headingSolution1" data-bs-parent="#accordionSolution1">
 <div class="accordion-body">
 <p><strong>A</strong>: It will be tedious to collect the dependencies
 one by one. And after the tedious process you will still not know which
@@ -826,7 +826,7 @@ <h3 class="tab-header" id="nav-tab-heading-2-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-2" class="tab-content">
-<div id="nav-tabpanel-2-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-2-Pythonvirtualenv">
+<div id="nav-tabpanel-2-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-2-Pythonvirtualenv" role="tabpanel">
 <p>Try this in your own project:</p>
 <pre class="console"><code>$ pip freeze &gt; requirements.txt</code></pre>
 <p>Have a look at the generated file and discuss what you see.</p>
@@ -836,7 +836,7 @@ <h3 class="tab-header" id="nav-tab-heading-2-R">
 over to the <a href="https://carpentries-incubator.github.io/python-intermediate-development/12-virtual-environments/index.html#creating-virtual-environments-using-venv" target="_blank" class="external-link">Carpentries Intermediate Research Software Development
 Skills (Python)</a> lesson.</p>
 </div>
-<div id="nav-tabpanel-2-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-2-R">
+<div id="nav-tabpanel-2-R" class="tab-pane" aria-labelledby="nav-tab-2-R" role="tabpanel">
 <p>This example uses renv.</p>
 <p>First initialize renv (install the package if needed) using
 <code>renv::init()</code>. Then try to “save” and “load” the state of
@@ -874,7 +874,7 @@ <h3 class="tab-header" id="nav-tab-heading-3-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-3" class="tab-content">
-<div id="nav-tabpanel-3-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-3-Pythonvirtualenv">
+<div id="nav-tabpanel-3-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-3-Pythonvirtualenv" role="tabpanel">
 <ol style="list-style-type: decimal">
 <li>Mark your changes as staged:</li>
 </ol>
@@ -900,7 +900,7 @@ <h3 class="code-label">BASH<i aria-hidden="true" data-feather="chevron-left"></i
 <pre class="sourceCode bash" tabindex="0"><code class="sourceCode bash"><span id="cb13-1"><a href="#cb13-1" tabindex="-1"></a><span class="fu">git</span> push origin main</span></code></pre>
 </div>
 </div>
-<div id="nav-tabpanel-3-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-3-R">
+<div id="nav-tabpanel-3-R" class="tab-pane" aria-labelledby="nav-tab-3-R" role="tabpanel">
 <ol style="list-style-type: decimal">
 <li>Mark your changes as staged (share not only the lock file, but also
 the .RProfile and activate.R files needed to recreate the
@@ -1682,7 +1682,7 @@ <h4 class="accordion-header" id="headingSolution1">
   Solution 1 - Basic
   </h4>
 </button>
-<div id="collapseSolution1" class="accordion-collapse collapse" data-bs-parent="#accordionSolution1" aria-labelledby="headingSolution1">
+<div id="collapseSolution1" class="accordion-collapse collapse" aria-labelledby="headingSolution1" data-bs-parent="#accordionSolution1">
 <div class="accordion-body">
 <div class="codewrapper sourceCode" id="cb14">
 <h3 class="code-label">PYTHON<i aria-hidden="true" data-feather="chevron-left"></i><i aria-hidden="true" data-feather="chevron-right"></i>
@@ -1831,7 +1831,7 @@ <h4 class="accordion-header" id="headingSolution2">
   Solution 2 - Advanced
   </h4>
 </button>
-<div id="collapseSolution2" class="accordion-collapse collapse" data-bs-parent="#accordionSolution2" aria-labelledby="headingSolution2">
+<div id="collapseSolution2" class="accordion-collapse collapse" aria-labelledby="headingSolution2" data-bs-parent="#accordionSolution2">
 <div class="accordion-body">
 <div class="codewrapper sourceCode" id="cb15">
 <h3 class="code-label">PYTHON<i aria-hidden="true" data-feather="chevron-left"></i><i aria-hidden="true" data-feather="chevron-right"></i>
@@ -1989,7 +1989,7 @@ <h4 class="accordion-header" id="headingSolution3">
   Solution to challenge 1
   </h4>
 </button>
-<div id="collapseSolution3" class="accordion-collapse collapse" data-bs-parent="#accordionSolution3" aria-labelledby="headingSolution3">
+<div id="collapseSolution3" class="accordion-collapse collapse" aria-labelledby="headingSolution3" data-bs-parent="#accordionSolution3">
 <div class="accordion-body">
 <p>Write a function called <code>kelvin_to_celsius</code> that takes a
 temperature in Kelvin and returns that temperature in Celsius</p>
@@ -2047,7 +2047,7 @@ <h4 class="accordion-header" id="headingSolution4">
   Solution to challenge 2
   </h4>
 </button>
-<div id="collapseSolution4" class="accordion-collapse collapse" data-bs-parent="#accordionSolution4" aria-labelledby="headingSolution4">
+<div id="collapseSolution4" class="accordion-collapse collapse" aria-labelledby="headingSolution4" data-bs-parent="#accordionSolution4">
 <div class="accordion-body">
 <p>Define the function to convert directly from Fahrenheit to Celsius,
 by reusing these two functions above</p>
@@ -2382,8 +2382,8 @@ <h3 class="callout-title">Key Points</h3>
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/aio.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/aio.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/documentation.html b/instructor/documentation.html
index e426f7c..56bef13 100644
--- a/instructor/documentation.html
+++ b/instructor/documentation.html
@@ -688,7 +688,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/documentation.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/further-improvements.html b/instructor/further-improvements.html
index 07972ed..d9ae4e2 100644
--- a/instructor/further-improvements.html
+++ b/instructor/further-improvements.html
@@ -522,7 +522,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/further-improvements.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/github.html b/instructor/github.html
index 27ca5b6..d2251f1 100644
--- a/instructor/github.html
+++ b/instructor/github.html
@@ -569,7 +569,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/github.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/good-code.html b/instructor/good-code.html
index aa867bf..5e3859f 100644
--- a/instructor/good-code.html
+++ b/instructor/good-code.html
@@ -700,7 +700,7 @@ <h4 class="accordion-header" id="headingSolution1">
   Solution 1 - Basic
   </h4>
 </button>
-<div id="collapseSolution1" class="accordion-collapse collapse" data-bs-parent="#accordionSolution1" aria-labelledby="headingSolution1">
+<div id="collapseSolution1" class="accordion-collapse collapse" aria-labelledby="headingSolution1" data-bs-parent="#accordionSolution1">
 <div class="accordion-body">
 <div class="codewrapper sourceCode" id="cb14">
 <h3 class="code-label">PYTHON<i aria-hidden="true" data-feather="chevron-left"></i><i aria-hidden="true" data-feather="chevron-right"></i>
@@ -849,7 +849,7 @@ <h4 class="accordion-header" id="headingSolution2">
   Solution 2 - Advanced
   </h4>
 </button>
-<div id="collapseSolution2" class="accordion-collapse collapse" data-bs-parent="#accordionSolution2" aria-labelledby="headingSolution2">
+<div id="collapseSolution2" class="accordion-collapse collapse" aria-labelledby="headingSolution2" data-bs-parent="#accordionSolution2">
 <div class="accordion-body">
 <div class="codewrapper sourceCode" id="cb15">
 <h3 class="code-label">PYTHON<i aria-hidden="true" data-feather="chevron-left"></i><i aria-hidden="true" data-feather="chevron-right"></i>
@@ -1005,7 +1005,7 @@ <h4 class="accordion-header" id="headingSolution3">
   Solution to challenge 1
   </h4>
 </button>
-<div id="collapseSolution3" class="accordion-collapse collapse" data-bs-parent="#accordionSolution3" aria-labelledby="headingSolution3">
+<div id="collapseSolution3" class="accordion-collapse collapse" aria-labelledby="headingSolution3" data-bs-parent="#accordionSolution3">
 <div class="accordion-body">
 <p>Write a function called <code>kelvin_to_celsius</code> that takes a
 temperature in Kelvin and returns that temperature in Celsius</p>
@@ -1062,7 +1062,7 @@ <h4 class="accordion-header" id="headingSolution4">
   Solution to challenge 2
   </h4>
 </button>
-<div id="collapseSolution4" class="accordion-collapse collapse" data-bs-parent="#accordionSolution4" aria-labelledby="headingSolution4">
+<div id="collapseSolution4" class="accordion-collapse collapse" aria-labelledby="headingSolution4" data-bs-parent="#accordionSolution4">
 <div class="accordion-body">
 <p>Define the function to convert directly from Fahrenheit to Celsius,
 by reusing these two functions above</p>
@@ -1174,7 +1174,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/good-code.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/images.html b/instructor/images.html
index 25d2588..210f6e0 100644
--- a/instructor/images.html
+++ b/instructor/images.html
@@ -450,8 +450,8 @@ <h3 id="software-dependencies-figure-3">Figure 3</h3>
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/images.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/images.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/index.html b/instructor/index.html
index e8110b8..05c707c 100644
--- a/instructor/index.html
+++ b/instructor/index.html
@@ -452,8 +452,8 @@ <h2 class="accordion-header" id="flush-headingTwelve">
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/index.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/index.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/instructor-notes.html b/instructor/instructor-notes.html
index 18dcc9a..392f4c1 100644
--- a/instructor/instructor-notes.html
+++ b/instructor/instructor-notes.html
@@ -452,8 +452,8 @@ <h3 id="documentation-headingInstructor1">
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/instructor-notes.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/instructor-notes.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/key-points.html b/instructor/key-points.html
index cd6a047..fc570b0 100644
--- a/instructor/key-points.html
+++ b/instructor/key-points.html
@@ -461,8 +461,8 @@ <h2 class="accordion-header" id="flush-headingTwelve">
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/key-points.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/key-points.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/profiles.html b/instructor/profiles.html
index 2d11275..caaec3e 100644
--- a/instructor/profiles.html
+++ b/instructor/profiles.html
@@ -352,8 +352,8 @@ <h1>Learner Profiles</h1>
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/profiles.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/profiles.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/reference.html b/instructor/reference.html
index ccaa031..f927784 100644
--- a/instructor/reference.html
+++ b/instructor/reference.html
@@ -393,7 +393,7 @@ <h1>Reference</h1>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/reference.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-11-27",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/reusability-check.html b/instructor/reusability-check.html
index bd1c8ad..5c98e23 100644
--- a/instructor/reusability-check.html
+++ b/instructor/reusability-check.html
@@ -469,7 +469,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/reusability-check.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/instructor/software-dependencies.html b/instructor/software-dependencies.html
index 352a5d9..bb44217 100644
--- a/instructor/software-dependencies.html
+++ b/instructor/software-dependencies.html
@@ -448,7 +448,7 @@ <h3 class="tab-header" id="nav-tab-heading-1-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-1" class="tab-content">
-<div id="nav-tabpanel-1-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-1-Pythonvirtualenv">
+<div id="nav-tabpanel-1-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-1-Pythonvirtualenv" role="tabpanel">
 <p><strong>A</strong>: You find a couple of library imports across the
 code but that’s it.</p>
 <p><strong>B</strong>: The README file lists which libraries were used
@@ -481,7 +481,7 @@ <h3 class="tab-header" id="nav-tab-heading-1-R">
 someproject==1.2.3
 anotherproject==2.3.4</code></pre>
 </div>
-<div id="nav-tabpanel-1-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-1-R">
+<div id="nav-tabpanel-1-R" class="tab-pane" aria-labelledby="nav-tab-1-R" role="tabpanel">
 <p><strong>A</strong>: You find a couple of <code>library()</code> or
 <code>require()</code> calls across the code but that’s it.</p>
 <p><strong>B</strong>: The README file lists which libraries were used
@@ -530,7 +530,7 @@ <h3 class="code-label">R<i aria-hidden="true" data-feather="chevron-left"></i><i
 <button class="accordion-button solution-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#collapseSolution1" aria-expanded="false" aria-controls="collapseSolution1">
   <h4 class="accordion-header" id="headingSolution1"> Show me the solution </h4>
 </button>
-<div id="collapseSolution1" class="accordion-collapse collapse" data-bs-parent="#accordionSolution1" aria-labelledby="headingSolution1">
+<div id="collapseSolution1" class="accordion-collapse collapse" aria-labelledby="headingSolution1" data-bs-parent="#accordionSolution1">
 <div class="accordion-body">
 <p><strong>A</strong>: It will be tedious to collect the dependencies
 one by one. And after the tedious process you will still not know which
@@ -579,7 +579,7 @@ <h3 class="tab-header" id="nav-tab-heading-2-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-2" class="tab-content">
-<div id="nav-tabpanel-2-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-2-Pythonvirtualenv">
+<div id="nav-tabpanel-2-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-2-Pythonvirtualenv" role="tabpanel">
 <p>Try this in your own project:</p>
 <pre class="console"><code>$ pip freeze &gt; requirements.txt</code></pre>
 <p>Have a look at the generated file and discuss what you see.</p>
@@ -589,7 +589,7 @@ <h3 class="tab-header" id="nav-tab-heading-2-R">
 over to the <a href="https://carpentries-incubator.github.io/python-intermediate-development/12-virtual-environments/index.html#creating-virtual-environments-using-venv" target="_blank" class="external-link">Carpentries Intermediate Research Software Development
 Skills (Python)</a> lesson.</p>
 </div>
-<div id="nav-tabpanel-2-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-2-R">
+<div id="nav-tabpanel-2-R" class="tab-pane" aria-labelledby="nav-tab-2-R" role="tabpanel">
 <p>This example uses renv.</p>
 <p>First initialize renv (install the package if needed) using
 <code>renv::init()</code>. Then try to “save” and “load” the state of
@@ -627,7 +627,7 @@ <h3 class="tab-header" id="nav-tab-heading-3-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-3" class="tab-content">
-<div id="nav-tabpanel-3-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-3-Pythonvirtualenv">
+<div id="nav-tabpanel-3-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-3-Pythonvirtualenv" role="tabpanel">
 <ol style="list-style-type: decimal"><li>Mark your changes as staged:</li>
 </ol><div class="codewrapper sourceCode" id="cb11">
 <h3 class="code-label">BASH<i aria-hidden="true" data-feather="chevron-left"></i><i aria-hidden="true" data-feather="chevron-right"></i>
@@ -647,7 +647,7 @@ <h3 class="code-label">BASH<i aria-hidden="true" data-feather="chevron-left"></i
 <pre class="sourceCode bash" tabindex="0"><code class="sourceCode bash"><span id="cb13-1"><a href="#cb13-1" tabindex="-1"></a><span class="fu">git</span> push origin main</span></code></pre>
 </div>
 </div>
-<div id="nav-tabpanel-3-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-3-R">
+<div id="nav-tabpanel-3-R" class="tab-pane" aria-labelledby="nav-tab-3-R" role="tabpanel">
 <ol style="list-style-type: decimal"><li>Mark your changes as staged (share not only the lock file, but also
 the .RProfile and activate.R files needed to recreate the
 environment):</li>
@@ -754,7 +754,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/instructor/software-dependencies.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/key-points.html b/key-points.html
index bb1df37..fa5f1f2 100644
--- a/key-points.html
+++ b/key-points.html
@@ -459,8 +459,8 @@ <h2 class="accordion-header" id="flush-headingTwelve">
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/key-points.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/key-points.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/pkgdown.yml b/pkgdown.yml
index 1735073..35b45b8 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -2,4 +2,4 @@ pandoc: 3.1.11
 pkgdown: 2.1.1
 pkgdown_sha: ~
 articles: {}
-last_built: 2024-12-03T14:53Z
+last_built: 2024-12-10T00:50Z
diff --git a/profiles.html b/profiles.html
index 6e0496b..cb18b9e 100644
--- a/profiles.html
+++ b/profiles.html
@@ -352,8 +352,8 @@ <h1>Learner Profiles</h1>
   "url": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/profiles.html",
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/profiles.html",
   "dateCreated": "2024-11-27",
-  "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "dateModified": "2024-12-10",
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/reference.html b/reference.html
index 0f433cf..819c77b 100644
--- a/reference.html
+++ b/reference.html
@@ -391,7 +391,7 @@ <h1>Reference</h1>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/reference.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-11-27",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/reusability-check.html b/reusability-check.html
index 1e36687..4f34961 100644
--- a/reusability-check.html
+++ b/reusability-check.html
@@ -467,7 +467,7 @@ <h3 class="callout-title">Key Points</h3>
   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/reusability-check.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>
diff --git a/software-dependencies.html b/software-dependencies.html
index b5d281d..f03baef 100644
--- a/software-dependencies.html
+++ b/software-dependencies.html
@@ -446,7 +446,7 @@ <h3 class="tab-header" id="nav-tab-heading-1-R">
 </button>
 </div>
 </nav><div id="nav-tabContent-1" class="tab-content">
-<div id="nav-tabpanel-1-Pythonvirtualenv" class="tab-pane show active" role="tabpanel" aria-labelledby="nav-tab-1-Pythonvirtualenv">
+<div id="nav-tabpanel-1-Pythonvirtualenv" class="tab-pane show active" aria-labelledby="nav-tab-1-Pythonvirtualenv" role="tabpanel">
 <p><strong>A</strong>: You find a couple of library imports across the
 code but that’s it.</p>
 <p><strong>B</strong>: The README file lists which libraries were used
@@ -479,7 +479,7 @@ <h3 class="tab-header" id="nav-tab-heading-1-R">
 someproject==1.2.3
 anotherproject==2.3.4</code></pre>
 </div>
-<div id="nav-tabpanel-1-R" class="tab-pane" role="tabpanel" aria-labelledby="nav-tab-1-R">
+<div id="nav-tabpanel-1-R" class="tab-pane" aria-labelledby="nav-tab-1-R" role="tabpanel">
 <p><strong>A</strong>: You find a couple of <code>library()</code> or
 <code>require()</code> calls across the code but that’s it.</p>
 <p><strong>B</strong>: The README file lists which libraries were used
@@ -528,7 +528,7 @@ <h3 class="code-label">R<i aria-hidden="true" data-feather="chevron-left"></i><i
 <button class="accordion-button solution-button collapsed" type="button" data-bs-toggle="collapse" data-bs-target="#collapseSolution1" aria-expanded="false" aria-controls="collapseSolution1">
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 <p><strong>A</strong>: It will be tedious to collect the dependencies
 one by one. And after the tedious process you will still not know which
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 <p>Try this in your own project:</p>
 <pre class="console"><code>$ pip freeze &gt; requirements.txt</code></pre>
 <p>Have a look at the generated file and discuss what you see.</p>
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 over to the <a href="https://carpentries-incubator.github.io/python-intermediate-development/12-virtual-environments/index.html#creating-virtual-environments-using-venv" target="_blank" class="external-link">Carpentries Intermediate Research Software Development
 Skills (Python)</a> lesson.</p>
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 <p>This example uses renv.</p>
 <p>First initialize renv (install the package if needed) using
 <code>renv::init()</code>. Then try to “save” and “load” the state of
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 <ol style="list-style-type: decimal"><li>Mark your changes as staged:</li>
 </ol><div class="codewrapper sourceCode" id="cb11">
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 <pre class="sourceCode bash" tabindex="0"><code class="sourceCode bash"><span id="cb13-1"><a href="#cb13-1" tabindex="-1"></a><span class="fu">git</span> push origin main</span></code></pre>
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 <ol style="list-style-type: decimal"><li>Mark your changes as staged (share not only the lock file, but also
 the .RProfile and activate.R files needed to recreate the
 environment):</li>
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   "identifier": "https://esciencecenter-digital-skills.github.io/reproducible-research-through-reusable-code/software-dependencies.html",
   "dateCreated": "2024-11-27",
   "dateModified": "2024-12-03",
-  "datePublished": "2024-12-03"
+  "datePublished": "2024-12-10"
 }
 
   </script><script>