From 578a0b24da380ecdcfc84e7c6dddab9298c1dbcc Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Wed, 14 Jul 2021 16:54:44 +0200
Subject: [PATCH 01/19] Bump version

---
 pyproject.toml                  | 2 +-
 pyrepositoryminer/__init__.py   | 2 +-
 tests/test_pyrepositoryminer.py | 2 +-
 3 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/pyproject.toml b/pyproject.toml
index 4c0140e..d94c316 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pyrepositoryminer"
-version = "0.7.0"
+version = "0.8.0"
 description = "Efficient Repository Mining in Python"
 license = "GPL-3.0-or-later"
 authors = ["Fabian Heseding <39628987+fabianhe@users.noreply.github.com>"]
diff --git a/pyrepositoryminer/__init__.py b/pyrepositoryminer/__init__.py
index 748ddf6..b2ff1db 100644
--- a/pyrepositoryminer/__init__.py
+++ b/pyrepositoryminer/__init__.py
@@ -1,4 +1,4 @@
-__version__ = "0.7.0"
+__version__ = "0.8.0"
 
 from typer import Typer
 
diff --git a/tests/test_pyrepositoryminer.py b/tests/test_pyrepositoryminer.py
index 14eda61..f854cc1 100644
--- a/tests/test_pyrepositoryminer.py
+++ b/tests/test_pyrepositoryminer.py
@@ -2,4 +2,4 @@
 
 
 def test_version() -> None:
-    assert __version__ == "0.7.0"
+    assert __version__ == "0.8.0"

From 2471a72dc7d778f33a4353ddd666be35da87e65c Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Wed, 14 Jul 2021 16:55:38 +0200
Subject: [PATCH 02/19] Update dependencies

---
 poetry.lock    | 65 ++++++++++++++++++++++++++++++++++++--------------
 pyproject.toml |  2 +-
 2 files changed, 48 insertions(+), 19 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index fcd9c54..f3b6e20 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -28,6 +28,18 @@ docs = ["furo", "sphinx", "zope.interface", "sphinx-notfound-page"]
 tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface"]
 tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins"]
 
+[[package]]
+name = "backports.entry-points-selectable"
+version = "1.1.0"
+description = "Compatibility shim providing selectable entry points for older implementations"
+category = "dev"
+optional = false
+python-versions = ">=2.7"
+
+[package.extras]
+docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"]
+testing = ["pytest (>=4.6)", "pytest-flake8", "pytest-cov", "pytest-black (>=0.3.7)", "pytest-mypy", "pytest-checkdocs (>=2.4)", "pytest-enabler (>=1.0.1)"]
+
 [[package]]
 name = "black"
 version = "21.6b0"
@@ -254,6 +266,14 @@ category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
+[[package]]
+name = "platformdirs"
+version = "2.0.2"
+description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
+category = "dev"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+
 [[package]]
 name = "pluggy"
 version = "0.13.1"
@@ -459,7 +479,7 @@ python-versions = "*"
 
 [[package]]
 name = "uvloop"
-version = "0.15.2"
+version = "0.15.3"
 description = "Fast implementation of asyncio event loop on top of libuv"
 category = "main"
 optional = false
@@ -472,16 +492,17 @@ test = ["aiohttp", "flake8 (>=3.8.4,<3.9.0)", "psutil", "pycodestyle (>=2.6.0,<2
 
 [[package]]
 name = "virtualenv"
-version = "20.4.7"
+version = "20.5.0"
 description = "Virtual Python Environment builder"
 category = "dev"
 optional = false
-python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7"
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
 
 [package.dependencies]
-appdirs = ">=1.4.3,<2"
+"backports.entry-points-selectable" = ">=1.0.4"
 distlib = ">=0.3.1,<1"
 filelock = ">=3.0.0,<4"
+platformdirs = ">=2,<3"
 six = ">=1.9.0,<2"
 
 [package.extras]
@@ -510,8 +531,8 @@ testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytes
 
 [metadata]
 lock-version = "1.1"
-python-versions = "^3.8"
-content-hash = "f631427746d948fad31e0aa17fab0fad991a50fdba9a38c794002a880223d231"
+python-versions = "^3.9"
+content-hash = "db93c9da9b03e1bc43517fcf2e05959f3aaf7b0daf0d42465369a162d93649ae"
 
 [metadata.files]
 appdirs = [
@@ -526,6 +547,10 @@ attrs = [
     {file = "attrs-21.2.0-py2.py3-none-any.whl", hash = "sha256:149e90d6d8ac20db7a955ad60cf0e6881a3f20d37096140088356da6c716b0b1"},
     {file = "attrs-21.2.0.tar.gz", hash = "sha256:ef6aaac3ca6cd92904cdd0d83f629a15f18053ec84e6432106f7a4d04ae4f5fb"},
 ]
+"backports.entry-points-selectable" = [
+    {file = "backports.entry_points_selectable-1.1.0-py2.py3-none-any.whl", hash = "sha256:a6d9a871cde5e15b4c4a53e3d43ba890cc6861ec1332c9c2428c92f977192acc"},
+    {file = "backports.entry_points_selectable-1.1.0.tar.gz", hash = "sha256:988468260ec1c196dab6ae1149260e2f5472c9110334e5d51adcb77867361f6a"},
+]
 black = [
     {file = "black-21.6b0-py3-none-any.whl", hash = "sha256:dfb8c5a069012b2ab1e972e7b908f5fb42b6bbabcba0a788b86dc05067c7d9c7"},
     {file = "black-21.6b0.tar.gz", hash = "sha256:dc132348a88d103016726fe360cb9ede02cecf99b76e3660ce6c596be132ce04"},
@@ -667,6 +692,10 @@ pathspec = [
     {file = "pathspec-0.8.1-py2.py3-none-any.whl", hash = "sha256:aa0cb481c4041bf52ffa7b0d8fa6cd3e88a2ca4879c533c9153882ee2556790d"},
     {file = "pathspec-0.8.1.tar.gz", hash = "sha256:86379d6b86d75816baba717e64b1a3a3469deb93bb76d613c9ce79edc5cb68fd"},
 ]
+platformdirs = [
+    {file = "platformdirs-2.0.2-py2.py3-none-any.whl", hash = "sha256:0b9547541f599d3d242078ae60b927b3e453f0ad52f58b4d4bc3be86aed3ec41"},
+    {file = "platformdirs-2.0.2.tar.gz", hash = "sha256:3b00d081227d9037bbbca521a5787796b5ef5000faea1e43fd76f1d44b06fcfa"},
+]
 pluggy = [
     {file = "pluggy-0.13.1-py2.py3-none-any.whl", hash = "sha256:966c145cd83c96502c3c3868f50408687b38434af77734af1e9ca461a4081d2d"},
     {file = "pluggy-0.13.1.tar.gz", hash = "sha256:15b2acde666561e1298d71b523007ed7364de07029219b604cf808bfa1c765b0"},
@@ -858,20 +887,20 @@ typing-extensions = [
     {file = "typing_extensions-3.10.0.0.tar.gz", hash = "sha256:50b6f157849174217d0656f99dc82fe932884fb250826c18350e159ec6cdf342"},
 ]
 uvloop = [
-    {file = "uvloop-0.15.2-cp37-cp37m-macosx_10_14_x86_64.whl", hash = "sha256:19fa1d56c91341318ac5d417e7b61c56e9a41183946cc70c411341173de02c69"},
-    {file = "uvloop-0.15.2-cp37-cp37m-manylinux2010_x86_64.whl", hash = "sha256:e5e5f855c9bf483ee6cd1eb9a179b740de80cb0ae2988e3fa22309b78e2ea0e7"},
-    {file = "uvloop-0.15.2-cp37-cp37m-manylinux2014_aarch64.whl", hash = "sha256:42eda9f525a208fbc4f7cecd00fa15c57cc57646c76632b3ba2fe005004f051d"},
-    {file = "uvloop-0.15.2-cp38-cp38-macosx_10_14_x86_64.whl", hash = "sha256:90e56f17755e41b425ad19a08c41dc358fa7bf1226c0f8e54d4d02d556f7af7c"},
-    {file = "uvloop-0.15.2-cp38-cp38-manylinux2010_x86_64.whl", hash = "sha256:7ae39b11a5f4cec1432d706c21ecc62f9e04d116883178b09671aa29c46f7a47"},
-    {file = "uvloop-0.15.2-cp38-cp38-manylinux2014_aarch64.whl", hash = "sha256:b45218c99795803fb8bdbc9435ff7f54e3a591b44cd4c121b02fa83affb61c7c"},
-    {file = "uvloop-0.15.2-cp39-cp39-macosx_10_14_x86_64.whl", hash = "sha256:114543c84e95df1b4ff546e6e3a27521580466a30127f12172a3278172ad68bc"},
-    {file = "uvloop-0.15.2-cp39-cp39-manylinux2010_x86_64.whl", hash = "sha256:44cac8575bf168601424302045234d74e3561fbdbac39b2b54cc1d1d00b70760"},
-    {file = "uvloop-0.15.2-cp39-cp39-manylinux2014_aarch64.whl", hash = "sha256:6de130d0cb78985a5d080e323b86c5ecaf3af82f4890492c05981707852f983c"},
-    {file = "uvloop-0.15.2.tar.gz", hash = "sha256:2bb0624a8a70834e54dde8feed62ed63b50bad7a1265c40d6403a2ac447bce01"},
+    {file = "uvloop-0.15.3-cp37-cp37m-macosx_10_14_x86_64.whl", hash = "sha256:e71fb9038bfcd7646ca126c5ef19b17e48d4af9e838b2bcfda7a9f55a6552a32"},
+    {file = "uvloop-0.15.3-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:7522df4e45e4f25b50adbbbeb5bb9847495c438a628177099d2721f2751ff825"},
+    {file = "uvloop-0.15.3-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:ae2b325c0f6d748027f7463077e457006b4fdb35a8788f01754aadba825285ee"},
+    {file = "uvloop-0.15.3-cp38-cp38-macosx_10_14_x86_64.whl", hash = "sha256:0de811931e90ae2da9e19ce70ffad73047ab0c1dba7c6e74f9ae1a3aabeb89bd"},
+    {file = "uvloop-0.15.3-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:7f4b8a905df909a407c5791fb582f6c03b0d3b491ecdc1cdceaefbc9bf9e08f6"},
+    {file = "uvloop-0.15.3-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:2d8ffe44ae709f839c54bacf14ed283f41bee90430c3b398e521e10f8d117b3a"},
+    {file = "uvloop-0.15.3-cp39-cp39-macosx_10_14_x86_64.whl", hash = "sha256:63a3288abbc9c8ee979d7e34c34e780b2fbab3e7e53d00b6c80271119f277399"},
+    {file = "uvloop-0.15.3-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:5cda65fc60a645470b8525ce014516b120b7057b576fa876cdfdd5e60ab1efbb"},
+    {file = "uvloop-0.15.3-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:1ff05116ede1ebdd81802df339e5b1d4cab1dfbd99295bf27e90b4cec64d70e9"},
+    {file = "uvloop-0.15.3.tar.gz", hash = "sha256:905f0adb0c09c9f44222ee02f6b96fd88b493478fffb7a345287f9444e926030"},
 ]
 virtualenv = [
-    {file = "virtualenv-20.4.7-py2.py3-none-any.whl", hash = "sha256:2b0126166ea7c9c3661f5b8e06773d28f83322de7a3ff7d06f0aed18c9de6a76"},
-    {file = "virtualenv-20.4.7.tar.gz", hash = "sha256:14fdf849f80dbb29a4eb6caa9875d476ee2a5cf76a5f5415fa2f1606010ab467"},
+    {file = "virtualenv-20.5.0-py2.py3-none-any.whl", hash = "sha256:b7afa7f32abbf7dd4c24269a596cfbb0a422bb83c47215a785a7bf607cb88e1b"},
+    {file = "virtualenv-20.5.0.tar.gz", hash = "sha256:6b0e3eeb6cb081c9c81ec85633785e29edcdf6ff271d70e0d1e2bd616495c08c"},
 ]
 wcwidth = [
     {file = "wcwidth-0.2.5-py2.py3-none-any.whl", hash = "sha256:beb4802a9cebb9144e99086eff703a642a13d6a0052920003a230f3294bbe784"},
diff --git a/pyproject.toml b/pyproject.toml
index d94c316..88abc5d 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -13,7 +13,7 @@ documentation = "https://github.com/fabianhe/pyrepositoryminer/blob/master/DOCS.
 pyrepositoryminer = "pyrepositoryminer:app"
 
 [tool.poetry.dependencies]
-python = "^3.8"
+python = "^3.9"
 pygit2 = "^1.5.0"
 typer = {extras = ["all"], version = "^0.3.2"}
 radon = "^4.5.0"

From 8920e82e716b0247d69bf01185a2f45388c828d7 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Fri, 16 Jul 2021 13:30:08 +0200
Subject: [PATCH 03/19] Add pylint

---
 .pre-commit-config.yaml                       |  8 ++
 poetry.lock                                   | 80 +++++++++++++++-
 pyproject.toml                                |  1 +
 pyrepositoryminer/analyze.py                  |  1 +
 pyrepositoryminer/commands/analyze.py         | 13 ++-
 pyrepositoryminer/commands/commits.py         |  7 +-
 .../metrics/diffdir/difftokei.py              |  8 +-
 pyrepositoryminer/metrics/diffdir/main.py     |  8 +-
 pyrepositoryminer/metrics/diffdir/seerene.py  | 93 +++++++++----------
 pyrepositoryminer/metrics/dir/main.py         |  8 +-
 pyrepositoryminer/metrics/dir/tokei.py        |  8 +-
 pyrepositoryminer/metrics/main.py             |  3 +-
 .../metrics/nativeblob/complexity.py          | 10 +-
 .../metrics/nativeblob/halstead.py            | 12 +--
 .../metrics/nativeblob/linecount.py           | 10 +-
 .../metrics/nativeblob/linelength.py          | 10 +-
 .../metrics/nativeblob/maintainability.py     | 10 +-
 .../metrics/nativeblob/nesting.py             | 10 +-
 .../metrics/nativeblob/pylinecount.py         | 10 +-
 pyrepositoryminer/metrics/nativeblob/raw.py   | 10 +-
 .../metrics/nativetree/blobcount.py           |  4 +-
 .../metrics/nativetree/cacherate.py           |  4 +-
 pyrepositoryminer/metrics/nativetree/loc.py   |  4 +-
 .../metrics/nativetree/touchedlines.py        |  8 +-
 pyrepositoryminer/pobjects.py                 |  6 +-
 setup.cfg                                     |  7 +-
 26 files changed, 227 insertions(+), 126 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index d7d8721..1a6f976 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -22,6 +22,14 @@ repos:
     hooks:
       - id: flake8
         additional_dependencies: ["flake8-absolute-import"]
+  - repo: local
+    hooks:
+      - id: pylint
+        name: pylint
+        entry: pylint
+        language: system
+        types: [python]
+        require_serial: true
   - repo: https://github.com/pre-commit/mirrors-mypy
     rev: v0.812
     hooks:
diff --git a/poetry.lock b/poetry.lock
index f3b6e20..e3e1189 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -6,6 +6,18 @@ category = "dev"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "astroid"
+version = "2.6.2"
+description = "An abstract syntax tree for Python with inference support."
+category = "dev"
+optional = false
+python-versions = "~=3.6"
+
+[package.dependencies]
+lazy-object-proxy = ">=1.4.0"
+wrapt = ">=1.11,<1.13"
+
 [[package]]
 name = "atomicwrites"
 version = "1.4.0"
@@ -185,6 +197,14 @@ requirements_deprecated_finder = ["pipreqs", "pip-api"]
 colors = ["colorama (>=0.4.3,<0.5.0)"]
 plugins = ["setuptools"]
 
+[[package]]
+name = "lazy-object-proxy"
+version = "1.6.0"
+description = "A fast and thorough lazy object proxy."
+category = "dev"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
+
 [[package]]
 name = "mando"
 version = "0.6.4"
@@ -344,6 +364,21 @@ python-versions = "*"
 [package.dependencies]
 cffi = ">=1.4.0"
 
+[[package]]
+name = "pylint"
+version = "2.9.3"
+description = "python code static checker"
+category = "dev"
+optional = false
+python-versions = "~=3.6"
+
+[package.dependencies]
+astroid = ">=2.6.2,<2.7"
+colorama = {version = "*", markers = "sys_platform == \"win32\""}
+isort = ">=4.2.5,<6"
+mccabe = ">=0.6,<0.7"
+toml = ">=0.7.1"
+
 [[package]]
 name = "pyparsing"
 version = "2.4.7"
@@ -517,6 +552,14 @@ category = "dev"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "wrapt"
+version = "1.12.1"
+description = "Module for decorators, wrappers and monkey patching."
+category = "dev"
+optional = false
+python-versions = "*"
+
 [[package]]
 name = "zipp"
 version = "3.5.0"
@@ -532,13 +575,17 @@ testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytes
 [metadata]
 lock-version = "1.1"
 python-versions = "^3.9"
-content-hash = "db93c9da9b03e1bc43517fcf2e05959f3aaf7b0daf0d42465369a162d93649ae"
+content-hash = "65c9408bb176660504dff5b1042eb8d261d8a0bc740e7cb18409ce8ded8472be"
 
 [metadata.files]
 appdirs = [
     {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"},
     {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"},
 ]
+astroid = [
+    {file = "astroid-2.6.2-py3-none-any.whl", hash = "sha256:606b2911d10c3dcf35e58d2ee5c97360e8477d7b9f3efc3f24811c93e6fc2cd9"},
+    {file = "astroid-2.6.2.tar.gz", hash = "sha256:38b95085e9d92e2ca06cf8b35c12a74fa81da395a6f9e65803742e6509c05892"},
+]
 atomicwrites = [
     {file = "atomicwrites-1.4.0-py2.py3-none-any.whl", hash = "sha256:6d1784dea7c0c8d4a5172b6c620f40b6e4cbfdf96d783691f2e1302a7b88e197"},
     {file = "atomicwrites-1.4.0.tar.gz", hash = "sha256:ae70396ad1a434f9c7046fd2dd196fc04b12f9e91ffb859164193be8b6168a7a"},
@@ -640,6 +687,30 @@ isort = [
     {file = "isort-5.9.2-py3-none-any.whl", hash = "sha256:eed17b53c3e7912425579853d078a0832820f023191561fcee9d7cae424e0813"},
     {file = "isort-5.9.2.tar.gz", hash = "sha256:f65ce5bd4cbc6abdfbe29afc2f0245538ab358c14590912df638033f157d555e"},
 ]
+lazy-object-proxy = [
+    {file = "lazy-object-proxy-1.6.0.tar.gz", hash = "sha256:489000d368377571c6f982fba6497f2aa13c6d1facc40660963da62f5c379726"},
+    {file = "lazy_object_proxy-1.6.0-cp27-cp27m-macosx_10_14_x86_64.whl", hash = "sha256:c6938967f8528b3668622a9ed3b31d145fab161a32f5891ea7b84f6b790be05b"},
+    {file = "lazy_object_proxy-1.6.0-cp27-cp27m-win32.whl", hash = "sha256:ebfd274dcd5133e0afae738e6d9da4323c3eb021b3e13052d8cbd0e457b1256e"},
+    {file = "lazy_object_proxy-1.6.0-cp27-cp27m-win_amd64.whl", hash = "sha256:ed361bb83436f117f9917d282a456f9e5009ea12fd6de8742d1a4752c3017e93"},
+    {file = "lazy_object_proxy-1.6.0-cp27-cp27mu-manylinux1_x86_64.whl", hash = "sha256:d900d949b707778696fdf01036f58c9876a0d8bfe116e8d220cfd4b15f14e741"},
+    {file = "lazy_object_proxy-1.6.0-cp36-cp36m-manylinux1_x86_64.whl", hash = "sha256:5743a5ab42ae40caa8421b320ebf3a998f89c85cdc8376d6b2e00bd12bd1b587"},
+    {file = "lazy_object_proxy-1.6.0-cp36-cp36m-manylinux2014_aarch64.whl", hash = "sha256:bf34e368e8dd976423396555078def5cfc3039ebc6fc06d1ae2c5a65eebbcde4"},
+    {file = "lazy_object_proxy-1.6.0-cp36-cp36m-win32.whl", hash = "sha256:b579f8acbf2bdd9ea200b1d5dea36abd93cabf56cf626ab9c744a432e15c815f"},
+    {file = "lazy_object_proxy-1.6.0-cp36-cp36m-win_amd64.whl", hash = "sha256:4f60460e9f1eb632584c9685bccea152f4ac2130e299784dbaf9fae9f49891b3"},
+    {file = "lazy_object_proxy-1.6.0-cp37-cp37m-manylinux1_x86_64.whl", hash = "sha256:d7124f52f3bd259f510651450e18e0fd081ed82f3c08541dffc7b94b883aa981"},
+    {file = "lazy_object_proxy-1.6.0-cp37-cp37m-manylinux2014_aarch64.whl", hash = "sha256:22ddd618cefe54305df49e4c069fa65715be4ad0e78e8d252a33debf00f6ede2"},
+    {file = "lazy_object_proxy-1.6.0-cp37-cp37m-win32.whl", hash = "sha256:9d397bf41caad3f489e10774667310d73cb9c4258e9aed94b9ec734b34b495fd"},
+    {file = "lazy_object_proxy-1.6.0-cp37-cp37m-win_amd64.whl", hash = "sha256:24a5045889cc2729033b3e604d496c2b6f588c754f7a62027ad4437a7ecc4837"},
+    {file = "lazy_object_proxy-1.6.0-cp38-cp38-manylinux1_x86_64.whl", hash = "sha256:17e0967ba374fc24141738c69736da90e94419338fd4c7c7bef01ee26b339653"},
+    {file = "lazy_object_proxy-1.6.0-cp38-cp38-manylinux2014_aarch64.whl", hash = "sha256:410283732af311b51b837894fa2f24f2c0039aa7f220135192b38fcc42bd43d3"},
+    {file = "lazy_object_proxy-1.6.0-cp38-cp38-win32.whl", hash = "sha256:85fb7608121fd5621cc4377a8961d0b32ccf84a7285b4f1d21988b2eae2868e8"},
+    {file = "lazy_object_proxy-1.6.0-cp38-cp38-win_amd64.whl", hash = "sha256:d1c2676e3d840852a2de7c7d5d76407c772927addff8d742b9808fe0afccebdf"},
+    {file = "lazy_object_proxy-1.6.0-cp39-cp39-macosx_10_14_x86_64.whl", hash = "sha256:b865b01a2e7f96db0c5d12cfea590f98d8c5ba64ad222300d93ce6ff9138bcad"},
+    {file = "lazy_object_proxy-1.6.0-cp39-cp39-manylinux1_x86_64.whl", hash = "sha256:4732c765372bd78a2d6b2150a6e99d00a78ec963375f236979c0626b97ed8e43"},
+    {file = "lazy_object_proxy-1.6.0-cp39-cp39-manylinux2014_aarch64.whl", hash = "sha256:9698110e36e2df951c7c36b6729e96429c9c32b3331989ef19976592c5f3c77a"},
+    {file = "lazy_object_proxy-1.6.0-cp39-cp39-win32.whl", hash = "sha256:1fee665d2638491f4d6e55bd483e15ef21f6c8c2095f235fef72601021e64f61"},
+    {file = "lazy_object_proxy-1.6.0-cp39-cp39-win_amd64.whl", hash = "sha256:f5144c75445ae3ca2057faac03fda5a902eff196702b0a24daf1d6ce0650514b"},
+]
 mando = [
     {file = "mando-0.6.4-py2.py3-none-any.whl", hash = "sha256:4ce09faec7e5192ffc3c57830e26acba0fd6cd11e1ee81af0d4df0657463bd1c"},
     {file = "mando-0.6.4.tar.gz", hash = "sha256:79feb19dc0f097daa64a1243db578e7674909b75f88ac2220f1c065c10a0d960"},
@@ -743,6 +814,10 @@ pygit2 = [
     {file = "pygit2-1.6.1-cp39-cp39-win_amd64.whl", hash = "sha256:f90775afb11f69376e2af21ab56fcfbb52f6bc84117059ddf0355f81e5e36352"},
     {file = "pygit2-1.6.1.tar.gz", hash = "sha256:c3303776f774d3e0115c1c4f6e1fc35470d15f113a7ae9401a0b90acfa1661ac"},
 ]
+pylint = [
+    {file = "pylint-2.9.3-py3-none-any.whl", hash = "sha256:5d46330e6b8886c31b5e3aba5ff48c10f4aa5e76cbf9002c6544306221e63fbc"},
+    {file = "pylint-2.9.3.tar.gz", hash = "sha256:23a1dc8b30459d78e9ff25942c61bb936108ccbe29dd9e71c01dc8274961709a"},
+]
 pyparsing = [
     {file = "pyparsing-2.4.7-py2.py3-none-any.whl", hash = "sha256:ef9d7589ef3c200abe66653d3f1ab1033c3c419ae9b9bdb1240a85b024efc88b"},
     {file = "pyparsing-2.4.7.tar.gz", hash = "sha256:c203ec8783bf771a155b207279b9bccb8dea02d8f0c9e5f8ead507bc3246ecc1"},
@@ -906,6 +981,9 @@ wcwidth = [
     {file = "wcwidth-0.2.5-py2.py3-none-any.whl", hash = "sha256:beb4802a9cebb9144e99086eff703a642a13d6a0052920003a230f3294bbe784"},
     {file = "wcwidth-0.2.5.tar.gz", hash = "sha256:c4d647b99872929fdb7bdcaa4fbe7f01413ed3d98077df798530e5b04f116c83"},
 ]
+wrapt = [
+    {file = "wrapt-1.12.1.tar.gz", hash = "sha256:b62ffa81fb85f4332a4f609cab4ac40709470da05643a082ec1eb88e6d9b97d7"},
+]
 zipp = [
     {file = "zipp-3.5.0-py3-none-any.whl", hash = "sha256:957cfda87797e389580cb8b9e3870841ca991e2125350677b2ca83a0e99390a3"},
     {file = "zipp-3.5.0.tar.gz", hash = "sha256:f5812b1e007e48cff63449a5e9f4e7ebea716b4111f9c4f9a645f91d579bf0c4"},
diff --git a/pyproject.toml b/pyproject.toml
index 88abc5d..752408a 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -27,6 +27,7 @@ flake8 = "^3.9.1"
 isort = "^5.8.0"
 pre-commit = "^2.12.1"
 typer-cli = "^0.0.11"
+pylint = "^2.9.3"
 
 [build-system]
 requires = ["poetry-core>=1.0.0"]
diff --git a/pyrepositoryminer/analyze.py b/pyrepositoryminer/analyze.py
index 35c2961..e3b16c3 100644
--- a/pyrepositoryminer/analyze.py
+++ b/pyrepositoryminer/analyze.py
@@ -32,6 +32,7 @@ class InitArgs(NamedTuple):
     custom_metrics: Tuple[Any, ...]  # TODO make this a metric abc
 
 
+# pylint: disable=global-statement
 repo: Repository
 native_blob_metrics: Tuple[Any, ...]
 native_blob_visitor: NativeBlobVisitor
diff --git a/pyrepositoryminer/commands/analyze.py b/pyrepositoryminer/commands/analyze.py
index f694668..e39e052 100644
--- a/pyrepositoryminer/commands/analyze.py
+++ b/pyrepositoryminer/commands/analyze.py
@@ -34,12 +34,12 @@ def import_metric(import_str: str):  # type: ignore  # TODO make this a metric a
         if e.name != module_str:
             raise e from None
         echo(f'Could not import module "{module_str}"')
-        raise Abort()
+        raise Abort() from e
     try:
         instance = reduce(getattr, (module, *attrs_str.split(".")))  # type: ignore
-    except AttributeError:
+    except AttributeError as e:
         print(f'Attribute "{attrs_str}" not found in module "{module_str}"')
-        raise Abort()
+        raise Abort() from e
     if not isclass(instance):
         print(f'Instance "{instance}" must be a class')
         raise Abort()
@@ -55,7 +55,7 @@ def analyze(
     metrics: Optional[List[AvailableMetrics]] = Argument(None, case_sensitive=False),
     commits: Optional[FileText] = Option(
         None,
-        help="The newline-separated input file of commit ids. Commit ids are read from stdin if this is not passed.",  # noqa: E501
+        help="The newline-separated input file of commit ids. Commit ids are read from stdin if this is not passed.",  # pylint: disable=line-too-long
     ),
     custom_metrics: List[str] = Option([]),
     workers: int = 1,
@@ -64,7 +64,10 @@ def analyze(
 
     Either provide the commit ids to analyze on stdin or as a file argument."""
     metrics = metrics if metrics else []
-    ids = (id.strip() for id in (commits if commits else stdin))
+    ids = (
+        id.strip()
+        for id in (commits if commits else stdin)  # pylint: disable=superfluous-parens
+    )
     with Pool(
         max(workers, 1),
         initialize,
diff --git a/pyrepositoryminer/commands/commits.py b/pyrepositoryminer/commands/commits.py
index 13d7b1a..df12571 100644
--- a/pyrepositoryminer/commands/commits.py
+++ b/pyrepositoryminer/commands/commits.py
@@ -22,6 +22,7 @@ class Sort(str, Enum):
 
     def __init__(self, name: str) -> None:
         self.sort_name = name
+        super().__init__()
 
     @property
     def flag(self):  # type: ignore
@@ -67,7 +68,7 @@ def commits(
         dir_okay=False,
         writable=False,
         readable=True,
-        help="The newline-separated input file of branches to pull the commits from. Branches are read from stdin if this is not passed.",  # noqa: E501
+        help="The newline-separated input file of branches to pull the commits from. Branches are read from stdin if this is not passed.",  # pylint: disable=line-too-long
     ),
     simplify_first_parent: bool = True,
     drop_duplicates: bool = True,
@@ -77,11 +78,11 @@ def commits(
 ) -> None:
     """Get the commit ids of a repository.
 
-    Either provide the branches to get the commit ids from on stdin or as a file argument."""  # noqa: E501
+    Either provide the branches to get the commit ids from on stdin or as a file argument."""  # pylint: disable=line-too-long
     branch_names: Iterable[str]
     if branches != Path("-"):
         with open(branches) as f:
-            branch_names = [line for line in f]
+            branch_names = list(f)
     else:
         branch_names = (line for line in stdin)
     branch_names = (branch.strip() for branch in branch_names)
diff --git a/pyrepositoryminer/metrics/diffdir/difftokei.py b/pyrepositoryminer/metrics/diffdir/difftokei.py
index 8dc5fc9..e9d6602 100644
--- a/pyrepositoryminer/metrics/diffdir/difftokei.py
+++ b/pyrepositoryminer/metrics/diffdir/difftokei.py
@@ -14,9 +14,9 @@ def descend_tree(tree: Tree, obj_name: str) -> str:
 
 
 class DiffTokei(DiffDirMetric):
-    async def analyze(self, dir_tup: DirMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: DirMetricInput) -> Iterable[Metric]:
         p = await create_subprocess_exec(
-            "tokei", "--output", "json", dir_tup.path, stdout=PIPE
+            "tokei", "--output", "json", tup.path, stdout=PIPE
         )
         stdout, _ = await p.communicate()
         data = loads(bytes(stdout).decode("utf-8"))
@@ -31,8 +31,8 @@ async def analyze(self, dir_tup: DirMetricInput) -> Iterable[Metric]:
                 },
                 False,
                 ObjectIdentifier(
-                    descend_tree(dir_tup.tree, report["name"][len(dir_tup.path) + 1 :]),
-                    report["name"][len(dir_tup.path) + 1 :],
+                    descend_tree(tup.tree, report["name"][len(tup.path) + 1 :]),
+                    report["name"][len(tup.path) + 1 :],
                 ),
             )
             for category_name, reports in data["Total"]["children"].items()
diff --git a/pyrepositoryminer/metrics/diffdir/main.py b/pyrepositoryminer/metrics/diffdir/main.py
index e788a52..cfe2d10 100644
--- a/pyrepositoryminer/metrics/diffdir/main.py
+++ b/pyrepositoryminer/metrics/diffdir/main.py
@@ -27,11 +27,14 @@ def __init__(self, repository: Repository, base_dir: Optional[str] = None) -> No
         super().__init__()
         self.repository = repository
         self.base_dir = base_dir
+        self.tempdir: Optional[TemporaryDirectory[str]] = None
 
     def __call__(self, visitable_object: Object) -> Optional[DirMetricInput]:
         if not isinstance(visitable_object, Commit):
             return None
-        self.tempdir: TemporaryDirectory[str] = TemporaryDirectory(dir=self.base_dir)
+        self.tempdir = TemporaryDirectory(  # pylint: disable=consider-using-with
+            dir=self.base_dir
+        )
         self.repository.checkout_tree(
             visitable_object.tree.obj,
             directory=self.tempdir.name,
@@ -43,7 +46,8 @@ def __call__(self, visitable_object: Object) -> Optional[DirMetricInput]:
         return DirMetricInput(is_cached, self.tempdir.name, visitable_object.tree)
 
     def close(self) -> None:
-        self.tempdir.cleanup()
+        if self.tempdir is not None:
+            self.tempdir.cleanup()
 
 
 class DiffDirMetric(BaseMetric[DirMetricInput], ABC):
diff --git a/pyrepositoryminer/metrics/diffdir/seerene.py b/pyrepositoryminer/metrics/diffdir/seerene.py
index aefe089..f933a13 100644
--- a/pyrepositoryminer/metrics/diffdir/seerene.py
+++ b/pyrepositoryminer/metrics/diffdir/seerene.py
@@ -20,7 +20,7 @@ def descend_tree(tree: Tree, obj_name: str) -> str:
 
 
 class Seerene(DiffDirMetric):
-    async def analyze(self, dir_tup: DirMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: DirMetricInput) -> Iterable[Metric]:
         # assuming 'init' and 'import' have been called
         if (executables := getenv("EXECUTABLES")) is None or (
             token := getenv("LOCALANALYZER_TOKEN")
@@ -28,54 +28,53 @@ async def analyze(self, dir_tup: DirMetricInput) -> Iterable[Metric]:
             return []
         localanalyzer = (Path(executables) / "localanalyzer-v2.16").resolve()
         p = await create_subprocess_exec(
-            localanalyzer, "init", "--token", token, cwd=dir_tup.path, stdout=PIPE
+            localanalyzer, "init", "--token", token, cwd=tup.path, stdout=PIPE
         )
         await p.communicate()
-        f = NamedTemporaryFile("w")
-        log = NamedTemporaryFile("w")
-        dump(
-            {
-                "author-anonymization": False,
-                "components": {
-                    "code-log-export": {
-                        ".": {
-                            "export-codedir-path": ".",
-                            "export-logfile-path": log.name,
-                            "prefix": "",
-                            "vcs-type": "git",
-                        }
-                    }
-                },
-                "type": "seerene-application-import-configuration",
-                "version": "1",
-            },
-            f,
-            sort_keys=True,
-            indent=4,
-        )
-        f.seek(0)
-        p = await create_subprocess_exec(
-            localanalyzer, "import", f.name, cwd=dir_tup.path, stdout=PIPE
-        )
-        await p.communicate()
-        f.close()
-        p = await create_subprocess_exec(
-            localanalyzer, "analyze", cwd=dir_tup.path, stdout=PIPE
-        )
-        await p.communicate()
-        log.close()
+        with NamedTemporaryFile("w") as log:
+            with NamedTemporaryFile("w") as f:
+                dump(
+                    {
+                        "author-anonymization": False,
+                        "components": {
+                            "code-log-export": {
+                                ".": {
+                                    "export-codedir-path": ".",
+                                    "export-logfile-path": log.name,
+                                    "prefix": "",
+                                    "vcs-type": "git",
+                                }
+                            }
+                        },
+                        "type": "seerene-application-import-configuration",
+                        "version": "1",
+                    },
+                    f,
+                    sort_keys=True,
+                    indent=4,
+                )
+                f.seek(0)
+                p = await create_subprocess_exec(
+                    localanalyzer, "import", f.name, cwd=tup.path, stdout=PIPE
+                )
+                await p.communicate()
+            p = await create_subprocess_exec(
+                localanalyzer, "analyze", cwd=tup.path, stdout=PIPE
+            )
+            await p.communicate()
         result = []
-        with ZipFile(list((Path(dir_tup.path) / "pending").glob("*.zip"))[0]) as myzip:
-            with TextIOWrapper(myzip.open("m_main.csv")) as f:
-                reader = DictReader(f, delimiter=";")
-                for row in reader:
-                    path = row.pop("filename")
-                    result.append(
-                        Metric(
-                            self.name,
-                            row,
-                            False,
-                            ObjectIdentifier(descend_tree(dir_tup.tree, path), path),
+        with ZipFile(list((Path(tup.path) / "pending").glob("*.zip"))[0]) as myzip:
+            with myzip.open("m_main.csv") as z:
+                with TextIOWrapper(z) as f:
+                    reader = DictReader(f, delimiter=";")
+                    for row in reader:
+                        path = row.pop("filename")
+                        result.append(
+                            Metric(
+                                self.name,
+                                row,
+                                False,
+                                ObjectIdentifier(descend_tree(tup.tree, path), path),
+                            )
                         )
-                    )
         return result
diff --git a/pyrepositoryminer/metrics/dir/main.py b/pyrepositoryminer/metrics/dir/main.py
index 7e9f787..55a7762 100644
--- a/pyrepositoryminer/metrics/dir/main.py
+++ b/pyrepositoryminer/metrics/dir/main.py
@@ -14,11 +14,14 @@ def __init__(self, repository: Repository, base_dir: Optional[str] = None) -> No
         super().__init__()
         self.repository = repository
         self.base_dir = base_dir
+        self.tempdir: Optional[TemporaryDirectory[str]] = None
 
     def __call__(self, visitable_object: Object) -> Optional[DirMetricInput]:
         if not isinstance(visitable_object, Commit):
             return None
-        self.tempdir: TemporaryDirectory[str] = TemporaryDirectory(dir=self.base_dir)
+        self.tempdir = TemporaryDirectory(  # pylint: disable=consider-using-with
+            dir=self.base_dir
+        )
         self.repository.checkout_tree(
             visitable_object.tree.obj,
             directory=self.tempdir.name,
@@ -29,7 +32,8 @@ def __call__(self, visitable_object: Object) -> Optional[DirMetricInput]:
         return DirMetricInput(is_cached, self.tempdir.name, visitable_object.tree)
 
     def close(self) -> None:
-        self.tempdir.cleanup()
+        if self.tempdir is not None:
+            self.tempdir.cleanup()
 
 
 class DirMetric(BaseMetric[DirMetricInput], ABC):
diff --git a/pyrepositoryminer/metrics/dir/tokei.py b/pyrepositoryminer/metrics/dir/tokei.py
index 079489d..be6f346 100644
--- a/pyrepositoryminer/metrics/dir/tokei.py
+++ b/pyrepositoryminer/metrics/dir/tokei.py
@@ -16,9 +16,9 @@ def descend_tree(tree: Tree, obj_name: str) -> str:
 
 
 class Tokei(DirMetric):
-    async def analyze(self, dir_tup: DirMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: DirMetricInput) -> Iterable[Metric]:
         p = await create_subprocess_exec(
-            "tokei", "--output", "json", dir_tup.path, stdout=PIPE
+            "tokei", "--output", "json", tup.path, stdout=PIPE
         )
         stdout, _ = await p.communicate()
         data = loads(bytes(stdout).decode("utf-8"))
@@ -33,8 +33,8 @@ async def analyze(self, dir_tup: DirMetricInput) -> Iterable[Metric]:
                 },
                 False,
                 ObjectIdentifier(
-                    descend_tree(dir_tup.tree, report["name"][len(dir_tup.path) + 1 :]),
-                    report["name"][len(dir_tup.path) + 1 :],
+                    descend_tree(tup.tree, report["name"][len(tup.path) + 1 :]),
+                    report["name"][len(tup.path) + 1 :],
                 ),
             )
             for category_name, reports in data["Total"]["children"].items()
diff --git a/pyrepositoryminer/metrics/main.py b/pyrepositoryminer/metrics/main.py
index abd569d..0092304 100644
--- a/pyrepositoryminer/metrics/main.py
+++ b/pyrepositoryminer/metrics/main.py
@@ -35,8 +35,7 @@ def analyze(self, tup: T) -> Awaitable[Iterable[Metric]]:
     async def __call__(self, tup: T) -> Iterable[Metric]:
         if tup.is_cached:
             return await self.cache_hit(tup)
-        else:
-            return await self.analyze(tup)
+        return await self.analyze(tup)
 
     @classmethod
     @property
diff --git a/pyrepositoryminer/metrics/nativeblob/complexity.py b/pyrepositoryminer/metrics/nativeblob/complexity.py
index e54a176..18178ba 100644
--- a/pyrepositoryminer/metrics/nativeblob/complexity.py
+++ b/pyrepositoryminer/metrics/nativeblob/complexity.py
@@ -13,19 +13,19 @@
 class Complexity(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         return [
             Metric(
                 self.name,
                 None,
                 True,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
 
-    async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         try:
-            cc_data = cc_visit(blob_tup.blob.data)
+            cc_data = cc_visit(tup.blob.data)
         except (SyntaxError, UnicodeDecodeError):
             return []  # TODO get an error output?
         result = [
@@ -33,7 +33,7 @@ async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
                 self.name,
                 subobject.complexity,
                 False,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
                 subobject.fullname,
             )
             for subobject in cc_data
diff --git a/pyrepositoryminer/metrics/nativeblob/halstead.py b/pyrepositoryminer/metrics/nativeblob/halstead.py
index ad14576..cb1f71f 100644
--- a/pyrepositoryminer/metrics/nativeblob/halstead.py
+++ b/pyrepositoryminer/metrics/nativeblob/halstead.py
@@ -13,19 +13,19 @@
 class Halstead(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         return [
             Metric(
                 self.name,
                 None,
                 True,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
 
-    async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         try:
-            h_data = h_visit(blob_tup.blob.data.decode())
+            h_data = h_visit(tup.blob.data.decode())
         except (SyntaxError, UnicodeDecodeError):
             return []  # TODO get an error output?
         result = [
@@ -33,7 +33,7 @@ async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
                 self.name,
                 fn_data._asdict(),
                 False,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
                 fn_name,
             )
             for fn_name, fn_data in h_data.functions
@@ -43,7 +43,7 @@ async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
                 self.name,
                 h_data.total._asdict(),
                 False,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         )
         return result
diff --git a/pyrepositoryminer/metrics/nativeblob/linecount.py b/pyrepositoryminer/metrics/nativeblob/linecount.py
index 973f556..bda5f99 100644
--- a/pyrepositoryminer/metrics/nativeblob/linecount.py
+++ b/pyrepositoryminer/metrics/nativeblob/linecount.py
@@ -13,25 +13,25 @@
 class Linecount(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.is_binary())
 
-    async def cache_hit(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         return [
             Metric(
                 self.name,
                 None,
                 True,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
 
-    async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         p = await create_subprocess_exec("wc", "-l", stdin=PIPE, stdout=PIPE)
-        stdout, _ = await p.communicate(blob_tup.blob.data)
+        stdout, _ = await p.communicate(tup.blob.data)
         result = [
             Metric(
                 self.name,
                 int(stdout),
                 False,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
         return result
diff --git a/pyrepositoryminer/metrics/nativeblob/linelength.py b/pyrepositoryminer/metrics/nativeblob/linelength.py
index 5225fc0..6f9a823 100644
--- a/pyrepositoryminer/metrics/nativeblob/linelength.py
+++ b/pyrepositoryminer/metrics/nativeblob/linelength.py
@@ -11,25 +11,25 @@
 class Linelength(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.is_binary())
 
-    async def cache_hit(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         return [
             Metric(
                 self.name,
                 None,
                 True,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
 
-    async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         result = [
             Metric(
                 self.name,
                 len(line),
                 False,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
                 f"L{i+1}",
             )
-            for i, line in enumerate(blob_tup.blob.obj.data.split(b"\n"))
+            for i, line in enumerate(tup.blob.obj.data.split(b"\n"))
         ]
         return result
diff --git a/pyrepositoryminer/metrics/nativeblob/maintainability.py b/pyrepositoryminer/metrics/nativeblob/maintainability.py
index 4b9003d..5577719 100644
--- a/pyrepositoryminer/metrics/nativeblob/maintainability.py
+++ b/pyrepositoryminer/metrics/nativeblob/maintainability.py
@@ -13,19 +13,19 @@
 class Maintainability(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         return [
             Metric(
                 self.name,
                 None,
                 True,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
 
-    async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         try:
-            mi_data = mi_visit(blob_tup.blob.data.decode(), multi=True)
+            mi_data = mi_visit(tup.blob.data.decode(), multi=True)
         except (SyntaxError, UnicodeDecodeError):
             return []  # TODO get an error output?
         result = [
@@ -33,7 +33,7 @@ async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
                 self.name,
                 float(mi_data),
                 False,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
         return result
diff --git a/pyrepositoryminer/metrics/nativeblob/nesting.py b/pyrepositoryminer/metrics/nativeblob/nesting.py
index 09490c6..25ef75b 100644
--- a/pyrepositoryminer/metrics/nativeblob/nesting.py
+++ b/pyrepositoryminer/metrics/nativeblob/nesting.py
@@ -27,23 +27,23 @@
 class Nesting(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         return [
             Metric(
                 self.name,
                 None,
                 True,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
 
-    async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         result = [
             Metric(
                 self.name,
-                NestingASTVisitor().visit(parse(blob_tup.blob.obj.data)).result,
+                NestingASTVisitor().visit(parse(tup.blob.obj.data)).result,
                 False,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
         return result
diff --git a/pyrepositoryminer/metrics/nativeblob/pylinecount.py b/pyrepositoryminer/metrics/nativeblob/pylinecount.py
index 7016e4a..882935f 100644
--- a/pyrepositoryminer/metrics/nativeblob/pylinecount.py
+++ b/pyrepositoryminer/metrics/nativeblob/pylinecount.py
@@ -11,23 +11,23 @@
 class Pylinecount(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.is_binary())
 
-    async def cache_hit(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         return [
             Metric(
                 self.name,
                 None,
                 True,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
 
-    async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         result = [
             Metric(
                 self.name,
-                blob_tup.blob.obj.data.count(b"\n") + 1,
+                tup.blob.obj.data.count(b"\n") + 1,
                 False,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
         return result
diff --git a/pyrepositoryminer/metrics/nativeblob/raw.py b/pyrepositoryminer/metrics/nativeblob/raw.py
index 82edbc7..dc97e6d 100644
--- a/pyrepositoryminer/metrics/nativeblob/raw.py
+++ b/pyrepositoryminer/metrics/nativeblob/raw.py
@@ -13,19 +13,19 @@
 class Raw(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         return [
             Metric(
                 self.name,
                 None,
                 True,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
 
-    async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         try:
-            r_data = analyze(blob_tup.blob.data.decode())
+            r_data = analyze(tup.blob.data.decode())
         except (SyntaxError, UnicodeDecodeError):
             return []  # TODO get an error output?
         result = [
@@ -33,7 +33,7 @@ async def analyze(self, blob_tup: NativeBlobMetricInput) -> Iterable[Metric]:
                 self.name,
                 r_data._asdict(),
                 False,
-                ObjectIdentifier(blob_tup.blob.id, blob_tup.path),
+                ObjectIdentifier(tup.blob.id, tup.path),
             )
         ]
         return result
diff --git a/pyrepositoryminer/metrics/nativetree/blobcount.py b/pyrepositoryminer/metrics/nativetree/blobcount.py
index 09a40b7..f018464 100644
--- a/pyrepositoryminer/metrics/nativetree/blobcount.py
+++ b/pyrepositoryminer/metrics/nativetree/blobcount.py
@@ -6,9 +6,9 @@
 
 
 class Blobcount(NativeTreeMetric):
-    async def analyze(self, tree_tup: NativeTreeMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeTreeMetricInput) -> Iterable[Metric]:
         n = 0
-        q: List[Object] = [tree_tup.tree]
+        q: List[Object] = [tup.tree]
         while q:
             obj = q.pop(0)
             if isinstance(obj, Blob):
diff --git a/pyrepositoryminer/metrics/nativetree/cacherate.py b/pyrepositoryminer/metrics/nativetree/cacherate.py
index f2be29a..acd7e27 100644
--- a/pyrepositoryminer/metrics/nativetree/cacherate.py
+++ b/pyrepositoryminer/metrics/nativetree/cacherate.py
@@ -9,13 +9,13 @@ class CacheRate(NativeTreeMetric):
     def __init__(self) -> None:
         self.cache: Set[str] = set()
 
-    async def analyze(self, tree_tup: NativeTreeMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeTreeMetricInput) -> Iterable[Metric]:
         rate: Dict[str, Dict[bool, int]] = {
             "blobs": {True: 0, False: 0},
             "trees": {True: 0, False: 0},
             "other": {True: 0, False: 0},
         }
-        q: List[Object] = [tree_tup.tree]
+        q: List[Object] = [tup.tree]
         while q:
             obj = q.pop(0)
             is_cached = obj.id in self.cache
diff --git a/pyrepositoryminer/metrics/nativetree/loc.py b/pyrepositoryminer/metrics/nativetree/loc.py
index 237db84..ab4b4fe 100644
--- a/pyrepositoryminer/metrics/nativetree/loc.py
+++ b/pyrepositoryminer/metrics/nativetree/loc.py
@@ -6,9 +6,9 @@
 
 
 class Loc(NativeTreeMetric):
-    async def analyze(self, tree_tup: NativeTreeMetricInput) -> Iterable[Metric]:
+    async def analyze(self, tup: NativeTreeMetricInput) -> Iterable[Metric]:
         n = 0
-        q: List[Object] = [tree_tup.tree]
+        q: List[Object] = [tup.tree]
         while q:
             obj = q.pop(0)
             if isinstance(obj, Blob):
diff --git a/pyrepositoryminer/metrics/nativetree/touchedlines.py b/pyrepositoryminer/metrics/nativetree/touchedlines.py
index ed471ad..65d8c5e 100644
--- a/pyrepositoryminer/metrics/nativetree/touchedlines.py
+++ b/pyrepositoryminer/metrics/nativetree/touchedlines.py
@@ -12,14 +12,14 @@
 
 
 class TouchedLines(NativeTreeMetric):
-    async def analyze(self, tree_tup: NativeTreeMetricInput) -> Iterable[Metric]:
-        parent_trees = tuple(parent.tree.obj for parent in tree_tup.commit.parents)
+    async def analyze(self, tup: NativeTreeMetricInput) -> Iterable[Metric]:
+        parent_trees = tuple(parent.tree.obj for parent in tup.commit.parents)
         if not parent_trees:  # orphan commit is diffed to empty tree
-            diffs = [tree_tup.tree.obj.diff_to_tree(swap=True)]
+            diffs = [tup.tree.obj.diff_to_tree(swap=True)]
 
         else:
             diffs = [
-                tree_tup.tree.obj.diff_to_tree(parent_tree, swap=True)
+                tup.tree.obj.diff_to_tree(parent_tree, swap=True)
                 for parent_tree in parent_trees
             ]
         touched_lines = [
diff --git a/pyrepositoryminer/pobjects.py b/pyrepositoryminer/pobjects.py
index 13fb7a2..b5ba5ce 100644
--- a/pyrepositoryminer/pobjects.py
+++ b/pyrepositoryminer/pobjects.py
@@ -11,11 +11,11 @@
 class Object:
     @classmethod
     def from_pobject(cls, obj: pObject) -> Object:
+        if isinstance(obj, pBlob):
+            return Blob(obj)
         if isinstance(obj, pTree):
             return Tree(obj)
-        elif isinstance(obj, pBlob):
-            return Blob(obj)
-        elif isinstance(obj, pCommit):
+        if isinstance(obj, pCommit):
             return Commit(obj)
         return Object(obj)
 
diff --git a/setup.cfg b/setup.cfg
index 01b255a..f730690 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -1,10 +1,13 @@
 [flake8]
 max-line-length = 88
-extend-ignore = E203
+extend-ignore = E203,E501
 
 [isort]
 profile = black
 
 [mypy]
 strict = True
-disallow_untyped_decorators = False
\ No newline at end of file
+disallow_untyped_decorators = False
+
+[pylint.'MESSAGES CONTROL']
+disable=missing-module-docstring,missing-class-docstring,missing-function-docstring,no-name-in-module,fixme,invalid-overridden-method,invalid-name,too-many-arguments,duplicate-code
\ No newline at end of file

From 4552799c2c0ca76be9acdb1195d8a7fd819b2d3e Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Fri, 16 Jul 2021 13:45:53 +0200
Subject: [PATCH 04/19] Change pylint cfg

---
 setup.cfg | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/setup.cfg b/setup.cfg
index f730690..3d75190 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -9,5 +9,8 @@ profile = black
 strict = True
 disallow_untyped_decorators = False
 
+[pylint.MASTER]
+ignore-paths=^scripts/.*\.py$
+
 [pylint.'MESSAGES CONTROL']
-disable=missing-module-docstring,missing-class-docstring,missing-function-docstring,no-name-in-module,fixme,invalid-overridden-method,invalid-name,too-many-arguments,duplicate-code
\ No newline at end of file
+disable=missing-module-docstring,missing-class-docstring,missing-function-docstring,no-name-in-module,fixme,invalid-overridden-method,invalid-name,too-many-arguments,duplicate-code

From 3c60ee5fe15a91317518cd1956214ba7c2f65b84 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Mon, 26 Jul 2021 12:56:47 +0200
Subject: [PATCH 05/19] Change cache-hit default for nativeblobs

---
 .../metrics/nativeblob/complexity.py             | 10 ----------
 pyrepositoryminer/metrics/nativeblob/halstead.py | 10 ----------
 .../metrics/nativeblob/linecount.py              | 10 ----------
 .../metrics/nativeblob/linelength.py             | 10 ----------
 pyrepositoryminer/metrics/nativeblob/main.py     | 16 +++++++++++++++-
 .../metrics/nativeblob/maintainability.py        | 10 ----------
 pyrepositoryminer/metrics/nativeblob/nesting.py  | 10 ----------
 .../metrics/nativeblob/pylinecount.py            | 10 ----------
 pyrepositoryminer/metrics/nativeblob/raw.py      | 10 ----------
 9 files changed, 15 insertions(+), 81 deletions(-)

diff --git a/pyrepositoryminer/metrics/nativeblob/complexity.py b/pyrepositoryminer/metrics/nativeblob/complexity.py
index 18178ba..a4774b6 100644
--- a/pyrepositoryminer/metrics/nativeblob/complexity.py
+++ b/pyrepositoryminer/metrics/nativeblob/complexity.py
@@ -13,16 +13,6 @@
 class Complexity(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
-        return [
-            Metric(
-                self.name,
-                None,
-                True,
-                ObjectIdentifier(tup.blob.id, tup.path),
-            )
-        ]
-
     async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         try:
             cc_data = cc_visit(tup.blob.data)
diff --git a/pyrepositoryminer/metrics/nativeblob/halstead.py b/pyrepositoryminer/metrics/nativeblob/halstead.py
index cb1f71f..386ff82 100644
--- a/pyrepositoryminer/metrics/nativeblob/halstead.py
+++ b/pyrepositoryminer/metrics/nativeblob/halstead.py
@@ -13,16 +13,6 @@
 class Halstead(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
-        return [
-            Metric(
-                self.name,
-                None,
-                True,
-                ObjectIdentifier(tup.blob.id, tup.path),
-            )
-        ]
-
     async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         try:
             h_data = h_visit(tup.blob.data.decode())
diff --git a/pyrepositoryminer/metrics/nativeblob/linecount.py b/pyrepositoryminer/metrics/nativeblob/linecount.py
index bda5f99..5d038d0 100644
--- a/pyrepositoryminer/metrics/nativeblob/linecount.py
+++ b/pyrepositoryminer/metrics/nativeblob/linecount.py
@@ -13,16 +13,6 @@
 class Linecount(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.is_binary())
 
-    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
-        return [
-            Metric(
-                self.name,
-                None,
-                True,
-                ObjectIdentifier(tup.blob.id, tup.path),
-            )
-        ]
-
     async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         p = await create_subprocess_exec("wc", "-l", stdin=PIPE, stdout=PIPE)
         stdout, _ = await p.communicate(tup.blob.data)
diff --git a/pyrepositoryminer/metrics/nativeblob/linelength.py b/pyrepositoryminer/metrics/nativeblob/linelength.py
index 6f9a823..17cb6be 100644
--- a/pyrepositoryminer/metrics/nativeblob/linelength.py
+++ b/pyrepositoryminer/metrics/nativeblob/linelength.py
@@ -11,16 +11,6 @@
 class Linelength(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.is_binary())
 
-    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
-        return [
-            Metric(
-                self.name,
-                None,
-                True,
-                ObjectIdentifier(tup.blob.id, tup.path),
-            )
-        ]
-
     async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         result = [
             Metric(
diff --git a/pyrepositoryminer/metrics/nativeblob/main.py b/pyrepositoryminer/metrics/nativeblob/main.py
index 864fc41..4d47e45 100644
--- a/pyrepositoryminer/metrics/nativeblob/main.py
+++ b/pyrepositoryminer/metrics/nativeblob/main.py
@@ -2,7 +2,11 @@
 from typing import Callable, Iterable, List, Set, Tuple
 
 from pyrepositoryminer.metrics.main import BaseMetric, BaseVisitor
-from pyrepositoryminer.metrics.structs import NativeBlobMetricInput
+from pyrepositoryminer.metrics.structs import (
+    Metric,
+    NativeBlobMetricInput,
+    ObjectIdentifier,
+)
 from pyrepositoryminer.pobjects import Blob, Commit, Object, Tree
 
 
@@ -56,6 +60,16 @@ def f(tup: NativeBlobMetricInput) -> bool:
 
 
 class NativeBlobMetric(BaseMetric[NativeBlobMetricInput], ABC):
+    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
+        return [
+            Metric(
+                self.name,
+                None,
+                True,
+                ObjectIdentifier(tup.blob.id, tup.path),
+            )
+        ]
+
     @staticmethod
     @abstractmethod
     def filter(tup: NativeBlobMetricInput) -> bool:
diff --git a/pyrepositoryminer/metrics/nativeblob/maintainability.py b/pyrepositoryminer/metrics/nativeblob/maintainability.py
index 5577719..619d6b0 100644
--- a/pyrepositoryminer/metrics/nativeblob/maintainability.py
+++ b/pyrepositoryminer/metrics/nativeblob/maintainability.py
@@ -13,16 +13,6 @@
 class Maintainability(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
-        return [
-            Metric(
-                self.name,
-                None,
-                True,
-                ObjectIdentifier(tup.blob.id, tup.path),
-            )
-        ]
-
     async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         try:
             mi_data = mi_visit(tup.blob.data.decode(), multi=True)
diff --git a/pyrepositoryminer/metrics/nativeblob/nesting.py b/pyrepositoryminer/metrics/nativeblob/nesting.py
index 25ef75b..41d9944 100644
--- a/pyrepositoryminer/metrics/nativeblob/nesting.py
+++ b/pyrepositoryminer/metrics/nativeblob/nesting.py
@@ -27,16 +27,6 @@
 class Nesting(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
-        return [
-            Metric(
-                self.name,
-                None,
-                True,
-                ObjectIdentifier(tup.blob.id, tup.path),
-            )
-        ]
-
     async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         result = [
             Metric(
diff --git a/pyrepositoryminer/metrics/nativeblob/pylinecount.py b/pyrepositoryminer/metrics/nativeblob/pylinecount.py
index 882935f..cd41067 100644
--- a/pyrepositoryminer/metrics/nativeblob/pylinecount.py
+++ b/pyrepositoryminer/metrics/nativeblob/pylinecount.py
@@ -11,16 +11,6 @@
 class Pylinecount(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.is_binary())
 
-    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
-        return [
-            Metric(
-                self.name,
-                None,
-                True,
-                ObjectIdentifier(tup.blob.id, tup.path),
-            )
-        ]
-
     async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         result = [
             Metric(
diff --git a/pyrepositoryminer/metrics/nativeblob/raw.py b/pyrepositoryminer/metrics/nativeblob/raw.py
index dc97e6d..e0ab73e 100644
--- a/pyrepositoryminer/metrics/nativeblob/raw.py
+++ b/pyrepositoryminer/metrics/nativeblob/raw.py
@@ -13,16 +13,6 @@
 class Raw(NativeBlobMetric):
     filter = NativeBlobFilter(NativeBlobFilter.endswith(".py"))
 
-    async def cache_hit(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
-        return [
-            Metric(
-                self.name,
-                None,
-                True,
-                ObjectIdentifier(tup.blob.id, tup.path),
-            )
-        ]
-
     async def analyze(self, tup: NativeBlobMetricInput) -> Iterable[Metric]:
         try:
             r_data = analyze(tup.blob.data.decode())

From 281bccf2ab1529b2c5e42bdd3e78f1e487bf63a9 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Mon, 26 Jul 2021 12:57:38 +0200
Subject: [PATCH 06/19] Add utils

---
 pyrepositoryminer/metrics/diffdir/main.py    | 16 ++------------
 pyrepositoryminer/metrics/diffdir/seerene.py |  7 +------
 pyrepositoryminer/metrics/utils.py           | 22 ++++++++++++++++++++
 3 files changed, 25 insertions(+), 20 deletions(-)
 create mode 100644 pyrepositoryminer/metrics/utils.py

diff --git a/pyrepositoryminer/metrics/diffdir/main.py b/pyrepositoryminer/metrics/diffdir/main.py
index cfe2d10..ba8279d 100644
--- a/pyrepositoryminer/metrics/diffdir/main.py
+++ b/pyrepositoryminer/metrics/diffdir/main.py
@@ -1,27 +1,15 @@
 from abc import ABC
 from tempfile import TemporaryDirectory
-from typing import FrozenSet, Optional
+from typing import Optional
 
 from pygit2 import GIT_CHECKOUT_FORCE, Repository
-from pygit2._pygit2 import DiffFile
 
 from pyrepositoryminer.metrics.main import BaseMetric, BaseVisitor
 from pyrepositoryminer.metrics.structs import DirMetricInput
+from pyrepositoryminer.metrics.utils import get_touchedfiles
 from pyrepositoryminer.pobjects import Commit, Object
 
 
-def get_touchedfiles(commit: Commit) -> FrozenSet[DiffFile]:
-    if not commit.parents:
-        return frozenset(
-            delta.new_file for delta in commit.tree.obj.diff_to_tree(swap=True).deltas
-        )
-    return frozenset(
-        delta.new_file
-        for parent in commit.parents
-        for delta in commit.tree.obj.diff_to_tree(parent.tree.obj, swap=True).deltas
-    )
-
-
 class DiffDirVisitor(BaseVisitor):
     def __init__(self, repository: Repository, base_dir: Optional[str] = None) -> None:
         super().__init__()
diff --git a/pyrepositoryminer/metrics/diffdir/seerene.py b/pyrepositoryminer/metrics/diffdir/seerene.py
index f933a13..26e027c 100644
--- a/pyrepositoryminer/metrics/diffdir/seerene.py
+++ b/pyrepositoryminer/metrics/diffdir/seerene.py
@@ -1,7 +1,6 @@
 from asyncio import create_subprocess_exec
 from asyncio.subprocess import PIPE
 from csv import DictReader
-from functools import reduce
 from io import TextIOWrapper
 from json import dump
 from os import getenv
@@ -12,11 +11,7 @@
 
 from pyrepositoryminer.metrics.diffdir.main import DiffDirMetric
 from pyrepositoryminer.metrics.structs import DirMetricInput, Metric, ObjectIdentifier
-from pyrepositoryminer.pobjects import Tree
-
-
-def descend_tree(tree: Tree, obj_name: str) -> str:
-    return reduce(lambda a, b: a[b], obj_name.split("/"), tree).id  # type: ignore
+from pyrepositoryminer.metrics.utils import descend_tree
 
 
 class Seerene(DiffDirMetric):
diff --git a/pyrepositoryminer/metrics/utils.py b/pyrepositoryminer/metrics/utils.py
new file mode 100644
index 0000000..1fceb00
--- /dev/null
+++ b/pyrepositoryminer/metrics/utils.py
@@ -0,0 +1,22 @@
+from functools import reduce
+from typing import FrozenSet
+
+from pygit2._pygit2 import DiffFile
+
+from pyrepositoryminer.pobjects import Commit, Tree
+
+
+def get_touchedfiles(commit: Commit) -> FrozenSet[DiffFile]:
+    if not commit.parents:
+        return frozenset(
+            delta.new_file for delta in commit.tree.obj.diff_to_tree(swap=True).deltas
+        )
+    return frozenset(
+        delta.new_file
+        for parent in commit.parents
+        for delta in commit.tree.obj.diff_to_tree(parent.tree.obj, swap=True).deltas
+    )
+
+
+def descend_tree(tree: Tree, obj_name: str) -> str:
+    return reduce(lambda a, b: a[b], obj_name.split("/"), tree).id  # type: ignore

From dc55259611e9fcd2ed51ec3bf75f66b9cd03603e Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Mon, 26 Jul 2021 12:58:02 +0200
Subject: [PATCH 07/19] Change tokei metrics

---
 .../metrics/diffdir/difftokei.py              | 48 +-----------
 pyrepositoryminer/metrics/dir/tokei.py        | 78 +++++++++----------
 2 files changed, 40 insertions(+), 86 deletions(-)

diff --git a/pyrepositoryminer/metrics/diffdir/difftokei.py b/pyrepositoryminer/metrics/diffdir/difftokei.py
index e9d6602..41ed522 100644
--- a/pyrepositoryminer/metrics/diffdir/difftokei.py
+++ b/pyrepositoryminer/metrics/diffdir/difftokei.py
@@ -1,52 +1,10 @@
-from asyncio import create_subprocess_exec
-from asyncio.subprocess import PIPE
-from functools import reduce
-from json import loads
 from typing import Iterable
 
 from pyrepositoryminer.metrics.diffdir.main import DiffDirMetric
-from pyrepositoryminer.metrics.structs import DirMetricInput, Metric, ObjectIdentifier
-from pyrepositoryminer.pobjects import Tree
-
-
-def descend_tree(tree: Tree, obj_name: str) -> str:
-    return reduce(lambda a, b: a[b], obj_name.split("/"), tree).id  # type: ignore
+from pyrepositoryminer.metrics.dir.tokei import tokei
+from pyrepositoryminer.metrics.structs import DirMetricInput, Metric
 
 
 class DiffTokei(DiffDirMetric):
     async def analyze(self, tup: DirMetricInput) -> Iterable[Metric]:
-        p = await create_subprocess_exec(
-            "tokei", "--output", "json", tup.path, stdout=PIPE
-        )
-        stdout, _ = await p.communicate()
-        data = loads(bytes(stdout).decode("utf-8"))
-        result = [
-            Metric(
-                "tokei",
-                {
-                    "category": category_name,
-                    "blanks": report["stats"]["blanks"],
-                    "code": report["stats"]["code"],
-                    "comments": report["stats"]["comments"],
-                },
-                False,
-                ObjectIdentifier(
-                    descend_tree(tup.tree, report["name"][len(tup.path) + 1 :]),
-                    report["name"][len(tup.path) + 1 :],
-                ),
-            )
-            for category_name, reports in data["Total"]["children"].items()
-            for report in reports
-        ]
-        result.append(
-            Metric(
-                self.name,
-                {
-                    "blanks": data["Total"]["blanks"],
-                    "code": data["Total"]["code"],
-                    "comments": data["Total"]["comments"],
-                },
-                False,
-            )
-        )
-        return result
+        return await tokei(self.name, tup.path, tup.tree)
diff --git a/pyrepositoryminer/metrics/dir/tokei.py b/pyrepositoryminer/metrics/dir/tokei.py
index be6f346..4bdb87a 100644
--- a/pyrepositoryminer/metrics/dir/tokei.py
+++ b/pyrepositoryminer/metrics/dir/tokei.py
@@ -5,50 +5,46 @@
 
 from pyrepositoryminer.metrics.dir.main import DirMetric
 from pyrepositoryminer.metrics.structs import DirMetricInput, Metric, ObjectIdentifier
-from pyrepositoryminer.pobjects import Object, Tree
+from pyrepositoryminer.metrics.utils import descend_tree
+from pyrepositoryminer.pobjects import Tree
 
 
-def descend_tree(tree: Tree, obj_name: str) -> str:
-    item: Object = tree
-    for i in obj_name.split("/"):
-        item = item[i]  # type: ignore
-    return item.id
+async def tokei(name: str, path: str, tree: Tree) -> Iterable[Metric]:
+    p = await create_subprocess_exec("tokei", "--output", "json", path, stdout=PIPE)
+    stdout, _ = await p.communicate()
+    data = loads(bytes(stdout).decode("utf-8"))
+    result = [
+        Metric(
+            name,
+            {
+                "category": category_name,
+                "blanks": report["stats"]["blanks"],
+                "code": report["stats"]["code"],
+                "comments": report["stats"]["comments"],
+            },
+            False,
+            ObjectIdentifier(
+                descend_tree(tree, report["name"][len(path) + 1 :]),
+                report["name"][len(path) + 1 :],
+            ),
+        )
+        for category_name, reports in data["Total"]["children"].items()
+        for report in reports
+    ]
+    result.append(
+        Metric(
+            name,
+            {
+                "blanks": data["Total"]["blanks"],
+                "code": data["Total"]["code"],
+                "comments": data["Total"]["comments"],
+            },
+            False,
+        )
+    )
+    return result
 
 
 class Tokei(DirMetric):
     async def analyze(self, tup: DirMetricInput) -> Iterable[Metric]:
-        p = await create_subprocess_exec(
-            "tokei", "--output", "json", tup.path, stdout=PIPE
-        )
-        stdout, _ = await p.communicate()
-        data = loads(bytes(stdout).decode("utf-8"))
-        result = [
-            Metric(
-                "tokei",
-                {
-                    "category": category_name,
-                    "blanks": report["stats"]["blanks"],
-                    "code": report["stats"]["code"],
-                    "comments": report["stats"]["comments"],
-                },
-                False,
-                ObjectIdentifier(
-                    descend_tree(tup.tree, report["name"][len(tup.path) + 1 :]),
-                    report["name"][len(tup.path) + 1 :],
-                ),
-            )
-            for category_name, reports in data["Total"]["children"].items()
-            for report in reports
-        ]
-        result.append(
-            Metric(
-                self.name,
-                {
-                    "blanks": data["Total"]["blanks"],
-                    "code": data["Total"]["code"],
-                    "comments": data["Total"]["comments"],
-                },
-                False,
-            )
-        )
-        return result
+        return await tokei(self.name, tup.path, tup.tree)

From dd4a2b66a0ac00e52c914ed4454c9fd636346892 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Mon, 26 Jul 2021 14:06:04 +0200
Subject: [PATCH 08/19] Add new metrics class diffblobmetric

---
 pyrepositoryminer/analyze.py                  | 61 +++++++++----------
 pyrepositoryminer/commands/analyze.py         | 10 ++-
 pyrepositoryminer/metrics/__init__.py         |  5 ++
 .../metrics/diffblob/__init__.py              |  1 +
 pyrepositoryminer/metrics/diffblob/main.py    | 31 ++++++++++
 pyrepositoryminer/metrics/nativeblob/main.py  | 31 +++++-----
 6 files changed, 90 insertions(+), 49 deletions(-)
 create mode 100644 pyrepositoryminer/metrics/diffblob/__init__.py
 create mode 100644 pyrepositoryminer/metrics/diffblob/main.py

diff --git a/pyrepositoryminer/analyze.py b/pyrepositoryminer/analyze.py
index e3b16c3..8d06f06 100644
--- a/pyrepositoryminer/analyze.py
+++ b/pyrepositoryminer/analyze.py
@@ -11,6 +11,7 @@
 from uvloop import install
 
 from pyrepositoryminer.metrics import all_metrics
+from pyrepositoryminer.metrics.diffblob.main import DiffBlobMetric, DiffBlobVisitor
 from pyrepositoryminer.metrics.diffdir.main import DiffDirMetric, DiffDirVisitor
 from pyrepositoryminer.metrics.dir.main import DirMetric, DirVisitor
 from pyrepositoryminer.metrics.nativeblob.main import (
@@ -36,6 +37,8 @@ class InitArgs(NamedTuple):
 repo: Repository
 native_blob_metrics: Tuple[Any, ...]
 native_blob_visitor: NativeBlobVisitor
+diff_blob_metrics: Tuple[Any, ...]
+diff_blob_visitor: DiffBlobVisitor
 native_tree_metrics: Tuple[Any, ...]
 native_tree_visitor: NativeTreeVisitor
 dir_metrics: Tuple[Any, ...]
@@ -62,7 +65,6 @@ async def categorize_metrics(
 
 
 async def analyze(commit_id: str) -> Optional[CommitOutput]:
-    global repo, native_blob_metrics
     try:
         commit = repo.get(commit_id)
     except ValueError:
@@ -79,6 +81,13 @@ async def analyze(commit_id: str) -> Optional[CommitOutput]:
             for m in native_blob_metrics
             if not m.filter(blob_tup)
         )
+    if diff_blob_metrics:
+        futures.extend(
+            m(blob_tup)
+            for blob_tup in diff_blob_visitor(root)
+            for m in diff_blob_metrics
+            if not m.filter(blob_tup)
+        )
     if native_tree_metrics:
         tree_tup = native_tree_visitor(root)
         futures.extend(m(tree_tup) for m in native_tree_metrics)
@@ -100,45 +109,31 @@ def initialize(init_args: InitArgs) -> None:
     install()
     global repo
     global native_blob_metrics, native_blob_visitor
+    global diff_blob_metrics, diff_blob_visitor
     global native_tree_metrics, native_tree_visitor
     global dir_metrics, dir_visitor
     global diffdir_metrics, diffdir_visitor
+
+    def get_metrics(superclass) -> Tuple:  # type: ignore
+        return tuple(
+            [
+                all_metrics[m]()
+                for m in init_args.metrics
+                if issubclass(all_metrics[m], superclass)
+            ]
+            + [m() for m in init_args.custom_metrics if issubclass(m, superclass)]
+        )
+
     repo = Repository(init_args.repository)
-    native_blob_metrics = tuple(
-        [
-            all_metrics[m]()
-            for m in init_args.metrics
-            if issubclass(all_metrics[m], NativeBlobMetric)
-        ]
-        + [m() for m in init_args.custom_metrics if issubclass(m, NativeBlobMetric)]
-    )
+    native_blob_metrics = get_metrics(NativeBlobMetric)
     native_blob_visitor = NativeBlobVisitor()
-    native_tree_metrics = tuple(
-        [
-            all_metrics[m]()
-            for m in init_args.metrics
-            if issubclass(all_metrics[m], NativeTreeMetric)
-        ]
-        + [m() for m in init_args.custom_metrics if issubclass(m, NativeTreeMetric)]
-    )
+    diff_blob_metrics = get_metrics(DiffBlobMetric)
+    diff_blob_visitor = DiffBlobVisitor(repo)
+    native_tree_metrics = get_metrics(NativeTreeMetric)
     native_tree_visitor = NativeTreeVisitor()
-    dir_metrics = tuple(
-        [
-            all_metrics[m]()
-            for m in init_args.metrics
-            if issubclass(all_metrics[m], DirMetric)
-        ]
-        + [m() for m in init_args.custom_metrics if issubclass(m, DirMetric)]
-    )
+    dir_metrics = get_metrics(DirMetric)
     dir_visitor = DirVisitor(repo)
-    diffdir_metrics = tuple(
-        [
-            all_metrics[m]()
-            for m in init_args.metrics
-            if issubclass(all_metrics[m], DiffDirMetric)
-        ]
-        + [m() for m in init_args.custom_metrics if issubclass(m, DiffDirMetric)]
-    )
+    diffdir_metrics = get_metrics(DiffDirMetric)
     diffdir_visitor = DiffDirVisitor(repo)
 
 
diff --git a/pyrepositoryminer/commands/analyze.py b/pyrepositoryminer/commands/analyze.py
index e39e052..287e28f 100644
--- a/pyrepositoryminer/commands/analyze.py
+++ b/pyrepositoryminer/commands/analyze.py
@@ -12,6 +12,8 @@
 
 from pyrepositoryminer.analyze import InitArgs, initialize, worker
 from pyrepositoryminer.metrics import all_metrics
+from pyrepositoryminer.metrics.diffblob.main import DiffBlobMetric
+from pyrepositoryminer.metrics.diffdir.main import DiffDirMetric
 from pyrepositoryminer.metrics.dir.main import DirMetric
 from pyrepositoryminer.metrics.nativeblob.main import NativeBlobMetric
 from pyrepositoryminer.metrics.nativetree.main import NativeTreeMetric
@@ -43,7 +45,13 @@ def import_metric(import_str: str):  # type: ignore  # TODO make this a metric a
     if not isclass(instance):
         print(f'Instance "{instance}" must be a class')
         raise Abort()
-    parents = (NativeBlobMetric, NativeTreeMetric, DirMetric)
+    parents = (
+        NativeBlobMetric,
+        DiffBlobMetric,
+        NativeTreeMetric,
+        DirMetric,
+        DiffDirMetric,
+    )
     if not any(issubclass(instance, parent) for parent in parents):  # type: ignore
         print(f'Instance "{instance}" must subclass a pyrepositoryminer metric class')
         raise Abort()
diff --git a/pyrepositoryminer/metrics/__init__.py b/pyrepositoryminer/metrics/__init__.py
index 004db32..9e16faa 100644
--- a/pyrepositoryminer/metrics/__init__.py
+++ b/pyrepositoryminer/metrics/__init__.py
@@ -1,5 +1,6 @@
 from typing import Any, Dict
 
+import pyrepositoryminer.metrics.diffblob as DiffBlobMetrics
 import pyrepositoryminer.metrics.diffdir as DiffDirMetrics
 import pyrepositoryminer.metrics.dir as DirMetrics
 import pyrepositoryminer.metrics.nativeblob as NativeBlobMetrics
@@ -10,6 +11,10 @@
         getattr(NativeBlobMetrics, m).name: getattr(NativeBlobMetrics, m)
         for m in NativeBlobMetrics.__all__
     },
+    **{
+        getattr(DiffBlobMetrics, m).name: getattr(DiffBlobMetrics, m)
+        for m in DiffBlobMetrics.__all__
+    },
     **{
         getattr(NativeTreeMetrics, m).name: getattr(NativeTreeMetrics, m)
         for m in NativeTreeMetrics.__all__
diff --git a/pyrepositoryminer/metrics/diffblob/__init__.py b/pyrepositoryminer/metrics/diffblob/__init__.py
new file mode 100644
index 0000000..ea9b783
--- /dev/null
+++ b/pyrepositoryminer/metrics/diffblob/__init__.py
@@ -0,0 +1 @@
+__all__ = ()
diff --git a/pyrepositoryminer/metrics/diffblob/main.py b/pyrepositoryminer/metrics/diffblob/main.py
new file mode 100644
index 0000000..d20d6e8
--- /dev/null
+++ b/pyrepositoryminer/metrics/diffblob/main.py
@@ -0,0 +1,31 @@
+from abc import ABC, abstractmethod
+from typing import Iterable
+
+from pygit2 import Repository
+
+from pyrepositoryminer.metrics.main import BaseMetric, BaseVisitor
+from pyrepositoryminer.metrics.structs import NativeBlobMetricInput
+from pyrepositoryminer.metrics.utils import get_touchedfiles
+from pyrepositoryminer.pobjects import Blob, Commit, Object
+
+
+class DiffBlobVisitor(BaseVisitor):
+    def __init__(self, repository: Repository) -> None:
+        super().__init__()
+        self.repository = repository
+
+    def __call__(self, visitable_object: Object) -> Iterable[NativeBlobMetricInput]:
+        if isinstance(visitable_object, Commit):
+            for file in get_touchedfiles(visitable_object):
+                blob = Blob(self.repository.get(file.id))
+                yield NativeBlobMetricInput(
+                    self.oid_is_cached(blob.id), str(file.path), blob
+                )
+                self.cache_oid(blob.id)
+
+
+class DiffBlobMetric(BaseMetric[NativeBlobMetricInput], ABC):
+    @staticmethod
+    @abstractmethod
+    def filter(tup: NativeBlobMetricInput) -> bool:
+        pass
diff --git a/pyrepositoryminer/metrics/nativeblob/main.py b/pyrepositoryminer/metrics/nativeblob/main.py
index 4d47e45..536c249 100644
--- a/pyrepositoryminer/metrics/nativeblob/main.py
+++ b/pyrepositoryminer/metrics/nativeblob/main.py
@@ -12,21 +12,22 @@
 
 class NativeBlobVisitor(BaseVisitor):
     def __call__(self, visitable_object: Object) -> Iterable[NativeBlobMetricInput]:
-        visited_commit = False
-        q: List[Tuple[Object, str]] = [(visitable_object, "")]
-        while q:
-            vo, path = q.pop(0)
-            if isinstance(vo, Blob):
-                yield NativeBlobMetricInput(
-                    self.oid_is_cached(vo.id), f"{path}/{vo.name}", vo
-                )
-            elif isinstance(vo, Tree):
-                p = f"{f'{path}/' if path else ''}{vo.name if vo.name else ''}"
-                q.extend((sub_vo, p) for sub_vo in vo)
-            elif isinstance(vo, Commit) and not visited_commit:
-                q.append((vo.tree, ""))
-                visited_commit = False
-            self.cache_oid(vo.id)
+        if isinstance(visitable_object, Commit):
+            visited_commit = False
+            q: List[Tuple[Object, str]] = [(visitable_object, "")]
+            while q:
+                vo, path = q.pop(0)
+                if isinstance(vo, Blob):
+                    yield NativeBlobMetricInput(
+                        self.oid_is_cached(vo.id), f"{path}/{vo.name}", vo
+                    )
+                elif isinstance(vo, Tree):
+                    p = f"{f'{path}/' if path else ''}{vo.name if vo.name else ''}"
+                    q.extend((sub_vo, p) for sub_vo in vo)
+                elif isinstance(vo, Commit) and not visited_commit:
+                    q.append((vo.tree, ""))
+                    visited_commit = True
+                self.cache_oid(vo.id)
 
 
 class NativeBlobFilter:

From a140a31351547490a8c0ed5fe20778f6bd2c6e7a Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Mon, 26 Jul 2021 14:07:20 +0200
Subject: [PATCH 09/19] Add diffpylinecount

---
 DOCS.md                                               | 4 ++--
 pyrepositoryminer/metrics/diffblob/__init__.py        | 4 +++-
 pyrepositoryminer/metrics/diffblob/diffpylinecount.py | 7 +++++++
 3 files changed, 12 insertions(+), 3 deletions(-)
 create mode 100644 pyrepositoryminer/metrics/diffblob/diffpylinecount.py

diff --git a/DOCS.md b/DOCS.md
index 82d881c..366eb62 100644
--- a/DOCS.md
+++ b/DOCS.md
@@ -30,13 +30,13 @@ Either provide the commit ids to analyze on stdin or as a file argument.
 **Usage**:
 
 ```console
-$ pyrepositoryminer analyze [OPTIONS] REPOSITORY [METRICS]:[blobcount|cacherate|complexity|difftokei|halstead|linecount|linelength|loc|maintainability|nesting|pylinecount|raw|seerene|tokei|touchedlines]...
+$ pyrepositoryminer analyze [OPTIONS] REPOSITORY [METRICS]:[blobcount|cacherate|complexity|diffpylinecount|difftokei|halstead|linecount|linelength|loc|maintainability|nesting|pylinecount|raw|seerene|tokei|touchedlines]...
 ```
 
 **Arguments**:
 
 * `REPOSITORY`: The path to the bare repository.  [required]
-* `[METRICS]:[blobcount|cacherate|complexity|difftokei|halstead|linecount|linelength|loc|maintainability|nesting|pylinecount|raw|seerene|tokei|touchedlines]...`
+* `[METRICS]:[blobcount|cacherate|complexity|diffpylinecount|difftokei|halstead|linecount|linelength|loc|maintainability|nesting|pylinecount|raw|seerene|tokei|touchedlines]...`
 
 **Options**:
 
diff --git a/pyrepositoryminer/metrics/diffblob/__init__.py b/pyrepositoryminer/metrics/diffblob/__init__.py
index ea9b783..25538ea 100644
--- a/pyrepositoryminer/metrics/diffblob/__init__.py
+++ b/pyrepositoryminer/metrics/diffblob/__init__.py
@@ -1 +1,3 @@
-__all__ = ()
+from pyrepositoryminer.metrics.diffblob.diffpylinecount import Diffpylinecount
+
+__all__ = ("Diffpylinecount",)
diff --git a/pyrepositoryminer/metrics/diffblob/diffpylinecount.py b/pyrepositoryminer/metrics/diffblob/diffpylinecount.py
new file mode 100644
index 0000000..c7eb2e8
--- /dev/null
+++ b/pyrepositoryminer/metrics/diffblob/diffpylinecount.py
@@ -0,0 +1,7 @@
+from pyrepositoryminer.metrics.diffblob.main import DiffBlobMetric
+from pyrepositoryminer.metrics.nativeblob.pylinecount import Pylinecount
+
+
+class Diffpylinecount(DiffBlobMetric):
+    filter = Pylinecount.filter
+    analyze = Pylinecount.analyze

From a78739667dbc653dc05ca64890a2ce3886209d10 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Mon, 26 Jul 2021 14:10:51 +0200
Subject: [PATCH 10/19] Change tokei

---
 .../metrics/diffdir/difftokei.py              |  8 +-
 pyrepositoryminer/metrics/dir/tokei.py        | 73 +++++++++----------
 2 files changed, 37 insertions(+), 44 deletions(-)

diff --git a/pyrepositoryminer/metrics/diffdir/difftokei.py b/pyrepositoryminer/metrics/diffdir/difftokei.py
index 41ed522..850eb61 100644
--- a/pyrepositoryminer/metrics/diffdir/difftokei.py
+++ b/pyrepositoryminer/metrics/diffdir/difftokei.py
@@ -1,10 +1,6 @@
-from typing import Iterable
-
 from pyrepositoryminer.metrics.diffdir.main import DiffDirMetric
-from pyrepositoryminer.metrics.dir.tokei import tokei
-from pyrepositoryminer.metrics.structs import DirMetricInput, Metric
+from pyrepositoryminer.metrics.dir.tokei import Tokei
 
 
 class DiffTokei(DiffDirMetric):
-    async def analyze(self, tup: DirMetricInput) -> Iterable[Metric]:
-        return await tokei(self.name, tup.path, tup.tree)
+    analyze = Tokei.analyze
diff --git a/pyrepositoryminer/metrics/dir/tokei.py b/pyrepositoryminer/metrics/dir/tokei.py
index 4bdb87a..f9233a9 100644
--- a/pyrepositoryminer/metrics/dir/tokei.py
+++ b/pyrepositoryminer/metrics/dir/tokei.py
@@ -6,45 +6,42 @@
 from pyrepositoryminer.metrics.dir.main import DirMetric
 from pyrepositoryminer.metrics.structs import DirMetricInput, Metric, ObjectIdentifier
 from pyrepositoryminer.metrics.utils import descend_tree
-from pyrepositoryminer.pobjects import Tree
-
-
-async def tokei(name: str, path: str, tree: Tree) -> Iterable[Metric]:
-    p = await create_subprocess_exec("tokei", "--output", "json", path, stdout=PIPE)
-    stdout, _ = await p.communicate()
-    data = loads(bytes(stdout).decode("utf-8"))
-    result = [
-        Metric(
-            name,
-            {
-                "category": category_name,
-                "blanks": report["stats"]["blanks"],
-                "code": report["stats"]["code"],
-                "comments": report["stats"]["comments"],
-            },
-            False,
-            ObjectIdentifier(
-                descend_tree(tree, report["name"][len(path) + 1 :]),
-                report["name"][len(path) + 1 :],
-            ),
-        )
-        for category_name, reports in data["Total"]["children"].items()
-        for report in reports
-    ]
-    result.append(
-        Metric(
-            name,
-            {
-                "blanks": data["Total"]["blanks"],
-                "code": data["Total"]["code"],
-                "comments": data["Total"]["comments"],
-            },
-            False,
-        )
-    )
-    return result
 
 
 class Tokei(DirMetric):
     async def analyze(self, tup: DirMetricInput) -> Iterable[Metric]:
-        return await tokei(self.name, tup.path, tup.tree)
+        p = await create_subprocess_exec(
+            "tokei", "--output", "json", tup.path, stdout=PIPE
+        )
+        stdout, _ = await p.communicate()
+        data = loads(bytes(stdout).decode("utf-8"))
+        result = [
+            Metric(
+                self.name,
+                {
+                    "category": category_name,
+                    "blanks": report["stats"]["blanks"],
+                    "code": report["stats"]["code"],
+                    "comments": report["stats"]["comments"],
+                },
+                False,
+                ObjectIdentifier(
+                    descend_tree(tup.tree, report["name"][len(tup.path) + 1 :]),
+                    report["name"][len(tup.path) + 1 :],
+                ),
+            )
+            for category_name, reports in data["Total"]["children"].items()
+            for report in reports
+        ]
+        result.append(
+            Metric(
+                self.name,
+                {
+                    "blanks": data["Total"]["blanks"],
+                    "code": data["Total"]["code"],
+                    "comments": data["Total"]["comments"],
+                },
+                False,
+            )
+        )
+        return result

From 8e8e05e1346b423c1e79c04c84f5eb3b6605b962 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Mon, 26 Jul 2021 14:13:28 +0200
Subject: [PATCH 11/19] Update dependencies

---
 poetry.lock | 60 +++++++++++++++++++++++++++++++++--------------------
 1 file changed, 38 insertions(+), 22 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index e3e1189..6a90bd1 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -8,7 +8,7 @@ python-versions = "*"
 
 [[package]]
 name = "astroid"
-version = "2.6.2"
+version = "2.6.5"
 description = "An abstract syntax tree for Python with inference support."
 category = "dev"
 optional = false
@@ -54,7 +54,7 @@ testing = ["pytest (>=4.6)", "pytest-flake8", "pytest-cov", "pytest-black (>=0.3
 
 [[package]]
 name = "black"
-version = "21.6b0"
+version = "21.7b0"
 description = "The uncompromising code formatter."
 category = "dev"
 optional = false
@@ -66,7 +66,7 @@ click = ">=7.1.2"
 mypy-extensions = ">=0.4.3"
 pathspec = ">=0.8.1,<1"
 regex = ">=2020.1.8"
-toml = ">=0.10.1"
+tomli = ">=0.2.6,<2.0.0"
 
 [package.extras]
 colorama = ["colorama (>=0.4.3)"]
@@ -280,19 +280,23 @@ pyparsing = ">=2.0.2"
 
 [[package]]
 name = "pathspec"
-version = "0.8.1"
+version = "0.9.0"
 description = "Utility library for gitignore style pattern matching of file paths."
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
 
 [[package]]
 name = "platformdirs"
-version = "2.0.2"
+version = "2.1.0"
 description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.6"
+
+[package.extras]
+docs = ["Sphinx (>=4)", "furo (>=2021.7.5b38)", "proselint (>=0.10.2)", "sphinx-autodoc-typehints (>=1.12)"]
+test = ["appdirs (==1.4.4)", "pytest (>=6)", "pytest-cov (>=2.7)", "pytest-mock (>=3.6)"]
 
 [[package]]
 name = "pluggy"
@@ -366,14 +370,14 @@ cffi = ">=1.4.0"
 
 [[package]]
 name = "pylint"
-version = "2.9.3"
+version = "2.9.5"
 description = "python code static checker"
 category = "dev"
 optional = false
 python-versions = "~=3.6"
 
 [package.dependencies]
-astroid = ">=2.6.2,<2.7"
+astroid = ">=2.6.5,<2.7"
 colorama = {version = "*", markers = "sys_platform == \"win32\""}
 isort = ">=4.2.5,<6"
 mccabe = ">=0.6,<0.7"
@@ -463,6 +467,14 @@ category = "dev"
 optional = false
 python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 
+[[package]]
+name = "tomli"
+version = "1.1.0"
+description = "A lil' TOML parser"
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
 [[package]]
 name = "typed-ast"
 version = "1.4.3"
@@ -527,7 +539,7 @@ test = ["aiohttp", "flake8 (>=3.8.4,<3.9.0)", "psutil", "pycodestyle (>=2.6.0,<2
 
 [[package]]
 name = "virtualenv"
-version = "20.5.0"
+version = "20.6.0"
 description = "Virtual Python Environment builder"
 category = "dev"
 optional = false
@@ -583,8 +595,8 @@ appdirs = [
     {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"},
 ]
 astroid = [
-    {file = "astroid-2.6.2-py3-none-any.whl", hash = "sha256:606b2911d10c3dcf35e58d2ee5c97360e8477d7b9f3efc3f24811c93e6fc2cd9"},
-    {file = "astroid-2.6.2.tar.gz", hash = "sha256:38b95085e9d92e2ca06cf8b35c12a74fa81da395a6f9e65803742e6509c05892"},
+    {file = "astroid-2.6.5-py3-none-any.whl", hash = "sha256:7b963d1c590d490f60d2973e57437115978d3a2529843f160b5003b721e1e925"},
+    {file = "astroid-2.6.5.tar.gz", hash = "sha256:83e494b02d75d07d4e347b27c066fd791c0c74fc96c613d1ea3de0c82c48168f"},
 ]
 atomicwrites = [
     {file = "atomicwrites-1.4.0-py2.py3-none-any.whl", hash = "sha256:6d1784dea7c0c8d4a5172b6c620f40b6e4cbfdf96d783691f2e1302a7b88e197"},
@@ -599,8 +611,8 @@ attrs = [
     {file = "backports.entry_points_selectable-1.1.0.tar.gz", hash = "sha256:988468260ec1c196dab6ae1149260e2f5472c9110334e5d51adcb77867361f6a"},
 ]
 black = [
-    {file = "black-21.6b0-py3-none-any.whl", hash = "sha256:dfb8c5a069012b2ab1e972e7b908f5fb42b6bbabcba0a788b86dc05067c7d9c7"},
-    {file = "black-21.6b0.tar.gz", hash = "sha256:dc132348a88d103016726fe360cb9ede02cecf99b76e3660ce6c596be132ce04"},
+    {file = "black-21.7b0-py3-none-any.whl", hash = "sha256:1c7aa6ada8ee864db745b22790a32f94b2795c253a75d6d9b5e439ff10d23116"},
+    {file = "black-21.7b0.tar.gz", hash = "sha256:c8373c6491de9362e39271630b65b964607bc5c79c83783547d76c839b3aa219"},
 ]
 cffi = [
     {file = "cffi-1.14.6-cp27-cp27m-macosx_10_9_x86_64.whl", hash = "sha256:22b9c3c320171c108e903d61a3723b51e37aaa8c81255b5e7ce102775bd01e2c"},
@@ -760,12 +772,12 @@ packaging = [
     {file = "packaging-21.0.tar.gz", hash = "sha256:7dc96269f53a4ccec5c0670940a4281106dd0bb343f47b7471f779df49c2fbe7"},
 ]
 pathspec = [
-    {file = "pathspec-0.8.1-py2.py3-none-any.whl", hash = "sha256:aa0cb481c4041bf52ffa7b0d8fa6cd3e88a2ca4879c533c9153882ee2556790d"},
-    {file = "pathspec-0.8.1.tar.gz", hash = "sha256:86379d6b86d75816baba717e64b1a3a3469deb93bb76d613c9ce79edc5cb68fd"},
+    {file = "pathspec-0.9.0-py2.py3-none-any.whl", hash = "sha256:7d15c4ddb0b5c802d161efc417ec1a2558ea2653c2e8ad9c19098201dc1c993a"},
+    {file = "pathspec-0.9.0.tar.gz", hash = "sha256:e564499435a2673d586f6b2130bb5b95f04a3ba06f81b8f895b651a3c76aabb1"},
 ]
 platformdirs = [
-    {file = "platformdirs-2.0.2-py2.py3-none-any.whl", hash = "sha256:0b9547541f599d3d242078ae60b927b3e453f0ad52f58b4d4bc3be86aed3ec41"},
-    {file = "platformdirs-2.0.2.tar.gz", hash = "sha256:3b00d081227d9037bbbca521a5787796b5ef5000faea1e43fd76f1d44b06fcfa"},
+    {file = "platformdirs-2.1.0-py3-none-any.whl", hash = "sha256:b2b30ae52404f93e2024e85bba29329b85715d6b2f18ffe90ecd25a5c67553df"},
+    {file = "platformdirs-2.1.0.tar.gz", hash = "sha256:1964be5aba107a7ccb7de0e6f1f1bfde0dee51641f0e733028121f8e02e2e16b"},
 ]
 pluggy = [
     {file = "pluggy-0.13.1-py2.py3-none-any.whl", hash = "sha256:966c145cd83c96502c3c3868f50408687b38434af77734af1e9ca461a4081d2d"},
@@ -815,8 +827,8 @@ pygit2 = [
     {file = "pygit2-1.6.1.tar.gz", hash = "sha256:c3303776f774d3e0115c1c4f6e1fc35470d15f113a7ae9401a0b90acfa1661ac"},
 ]
 pylint = [
-    {file = "pylint-2.9.3-py3-none-any.whl", hash = "sha256:5d46330e6b8886c31b5e3aba5ff48c10f4aa5e76cbf9002c6544306221e63fbc"},
-    {file = "pylint-2.9.3.tar.gz", hash = "sha256:23a1dc8b30459d78e9ff25942c61bb936108ccbe29dd9e71c01dc8274961709a"},
+    {file = "pylint-2.9.5-py3-none-any.whl", hash = "sha256:748f81e5776d6273a6619506e08f1b48ff9bcb8198366a56821cf11aac14fc87"},
+    {file = "pylint-2.9.5.tar.gz", hash = "sha256:1f333dc72ef7f5ea166b3230936ebcfb1f3b722e76c980cb9fe6b9f95e8d3172"},
 ]
 pyparsing = [
     {file = "pyparsing-2.4.7-py2.py3-none-any.whl", hash = "sha256:ef9d7589ef3c200abe66653d3f1ab1033c3c419ae9b9bdb1240a85b024efc88b"},
@@ -916,6 +928,10 @@ toml = [
     {file = "toml-0.10.2-py2.py3-none-any.whl", hash = "sha256:806143ae5bfb6a3c6e736a764057db0e6a0e05e338b5630894a5f779cabb4f9b"},
     {file = "toml-0.10.2.tar.gz", hash = "sha256:b3bda1d108d5dd99f4a20d24d9c348e91c4db7ab1b749200bded2f839ccbe68f"},
 ]
+tomli = [
+    {file = "tomli-1.1.0-py3-none-any.whl", hash = "sha256:f4a182048010e89cbec0ae4686b21f550a7f2903f665e34a6de58ec15424f919"},
+    {file = "tomli-1.1.0.tar.gz", hash = "sha256:33d7984738f8bb699c9b0a816eb646a8178a69eaa792d258486776a5d21b8ca5"},
+]
 typed-ast = [
     {file = "typed_ast-1.4.3-cp35-cp35m-manylinux1_i686.whl", hash = "sha256:2068531575a125b87a41802130fa7e29f26c09a2833fea68d9a40cf33902eba6"},
     {file = "typed_ast-1.4.3-cp35-cp35m-manylinux1_x86_64.whl", hash = "sha256:c907f561b1e83e93fad565bac5ba9c22d96a54e7ea0267c708bffe863cbe4075"},
@@ -974,8 +990,8 @@ uvloop = [
     {file = "uvloop-0.15.3.tar.gz", hash = "sha256:905f0adb0c09c9f44222ee02f6b96fd88b493478fffb7a345287f9444e926030"},
 ]
 virtualenv = [
-    {file = "virtualenv-20.5.0-py2.py3-none-any.whl", hash = "sha256:b7afa7f32abbf7dd4c24269a596cfbb0a422bb83c47215a785a7bf607cb88e1b"},
-    {file = "virtualenv-20.5.0.tar.gz", hash = "sha256:6b0e3eeb6cb081c9c81ec85633785e29edcdf6ff271d70e0d1e2bd616495c08c"},
+    {file = "virtualenv-20.6.0-py2.py3-none-any.whl", hash = "sha256:e4fc84337dce37ba34ef520bf2d4392b392999dbe47df992870dc23230f6b758"},
+    {file = "virtualenv-20.6.0.tar.gz", hash = "sha256:51df5d8a2fad5d1b13e088ff38a433475768ff61f202356bb9812c454c20ae45"},
 ]
 wcwidth = [
     {file = "wcwidth-0.2.5-py2.py3-none-any.whl", hash = "sha256:beb4802a9cebb9144e99086eff703a642a13d6a0052920003a230f3294bbe784"},

From aa3b5c80a4933b2a84ee1f0778818d8c2dee3952 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Tue, 10 Aug 2021 12:00:28 +0200
Subject: [PATCH 12/19] Add scalene profiler

---
 poetry.lock    | 130 ++++++++++++++++++++++++++++++++++++++++++++++++-
 pyproject.toml |   1 +
 2 files changed, 130 insertions(+), 1 deletion(-)

diff --git a/poetry.lock b/poetry.lock
index 6a90bd1..ff4cdf3 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -101,6 +101,14 @@ category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
+[[package]]
+name = "cloudpickle"
+version = "1.6.0"
+description = "Extended pickling support for Python objects"
+category = "dev"
+optional = false
+python-versions = ">=3.5"
+
 [[package]]
 name = "colorama"
 version = "0.4.4"
@@ -109,6 +117,17 @@ category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
+[[package]]
+name = "commonmark"
+version = "0.9.1"
+description = "Python parser for the CommonMark Markdown spec"
+category = "dev"
+optional = false
+python-versions = "*"
+
+[package.extras]
+test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"]
+
 [[package]]
 name = "distlib"
 version = "0.3.2"
@@ -267,6 +286,22 @@ category = "dev"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "numpy"
+version = "1.21.1"
+description = "NumPy is the fundamental package for array computing with Python."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[[package]]
+name = "nvidia-ml-py"
+version = "11.450.51"
+description = "Python Bindings for the NVIDIA Management Library"
+category = "dev"
+optional = false
+python-versions = "*"
+
 [[package]]
 name = "packaging"
 version = "21.0"
@@ -368,6 +403,14 @@ python-versions = "*"
 [package.dependencies]
 cffi = ">=1.4.0"
 
+[[package]]
+name = "pygments"
+version = "2.9.0"
+description = "Pygments is a syntax highlighting package written in Python."
+category = "dev"
+optional = false
+python-versions = ">=3.5"
+
 [[package]]
 name = "pylint"
 version = "2.9.5"
@@ -443,6 +486,36 @@ category = "dev"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "rich"
+version = "10.7.0"
+description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal"
+category = "dev"
+optional = false
+python-versions = ">=3.6,<4.0"
+
+[package.dependencies]
+colorama = ">=0.4.0,<0.5.0"
+commonmark = ">=0.9.0,<0.10.0"
+pygments = ">=2.6.0,<3.0.0"
+
+[package.extras]
+jupyter = ["ipywidgets (>=7.5.1,<8.0.0)"]
+
+[[package]]
+name = "scalene"
+version = "1.3.12"
+description = "Scalene: A high-resolution, low-overhead CPU, GPU, and memory profiler for Python"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+cloudpickle = ">=1.5.0"
+numpy = "*"
+nvidia-ml-py = "11.450.51"
+rich = ">=9.2.10"
+
 [[package]]
 name = "shellingham"
 version = "1.4.0"
@@ -587,7 +660,7 @@ testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytes
 [metadata]
 lock-version = "1.1"
 python-versions = "^3.9"
-content-hash = "65c9408bb176660504dff5b1042eb8d261d8a0bc740e7cb18409ce8ded8472be"
+content-hash = "9d1826bb458af750e6d7e8e14e6ad2f24c54d12f61939932ac0864b5e59b2776"
 
 [metadata.files]
 appdirs = [
@@ -664,10 +737,18 @@ click = [
     {file = "click-7.1.2-py2.py3-none-any.whl", hash = "sha256:dacca89f4bfadd5de3d7489b7c8a566eee0d3676333fbb50030263894c38c0dc"},
     {file = "click-7.1.2.tar.gz", hash = "sha256:d2b5255c7c6349bc1bd1e59e08cd12acbbd63ce649f2588755783aa94dfb6b1a"},
 ]
+cloudpickle = [
+    {file = "cloudpickle-1.6.0-py3-none-any.whl", hash = "sha256:3a32d0eb0bc6f4d0c57fbc4f3e3780f7a81e6fee0fa935072884d58ae8e1cc7c"},
+    {file = "cloudpickle-1.6.0.tar.gz", hash = "sha256:9bc994f9e9447593bd0a45371f0e7ac7333710fcf64a4eb9834bf149f4ef2f32"},
+]
 colorama = [
     {file = "colorama-0.4.4-py2.py3-none-any.whl", hash = "sha256:9f47eda37229f68eee03b24b9748937c7dc3868f906e8ba69fbcbdd3bc5dc3e2"},
     {file = "colorama-0.4.4.tar.gz", hash = "sha256:5941b2b48a20143d2267e95b1c2a7603ce057ee39fd88e7329b0c292aa16869b"},
 ]
+commonmark = [
+    {file = "commonmark-0.9.1-py2.py3-none-any.whl", hash = "sha256:da2f38c92590f83de410ba1a3cbceafbc74fee9def35f9251ba9a971d6d66fd9"},
+    {file = "commonmark-0.9.1.tar.gz", hash = "sha256:452f9dc859be7f06631ddcb328b6919c67984aca654e5fefb3914d54691aed60"},
+]
 distlib = [
     {file = "distlib-0.3.2-py2.py3-none-any.whl", hash = "sha256:23e223426b28491b1ced97dc3bbe183027419dfc7982b4fa2f05d5f3ff10711c"},
     {file = "distlib-0.3.2.zip", hash = "sha256:106fef6dc37dd8c0e2c0a60d3fca3e77460a48907f335fa28420463a6f799736"},
@@ -767,6 +848,39 @@ nodeenv = [
     {file = "nodeenv-1.6.0-py2.py3-none-any.whl", hash = "sha256:621e6b7076565ddcacd2db0294c0381e01fd28945ab36bcf00f41c5daf63bef7"},
     {file = "nodeenv-1.6.0.tar.gz", hash = "sha256:3ef13ff90291ba2a4a7a4ff9a979b63ffdd00a464dbe04acf0ea6471517a4c2b"},
 ]
+numpy = [
+    {file = "numpy-1.21.1-cp37-cp37m-macosx_10_9_x86_64.whl", hash = "sha256:38e8648f9449a549a7dfe8d8755a5979b45b3538520d1e735637ef28e8c2dc50"},
+    {file = "numpy-1.21.1-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl", hash = "sha256:fd7d7409fa643a91d0a05c7554dd68aa9c9bb16e186f6ccfe40d6e003156e33a"},
+    {file = "numpy-1.21.1-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:a75b4498b1e93d8b700282dc8e655b8bd559c0904b3910b144646dbbbc03e062"},
+    {file = "numpy-1.21.1-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:1412aa0aec3e00bc23fbb8664d76552b4efde98fb71f60737c83efbac24112f1"},
+    {file = "numpy-1.21.1-cp37-cp37m-manylinux_2_5_i686.manylinux1_i686.whl", hash = "sha256:e46ceaff65609b5399163de5893d8f2a82d3c77d5e56d976c8b5fb01faa6b671"},
+    {file = "numpy-1.21.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.whl", hash = "sha256:c6a2324085dd52f96498419ba95b5777e40b6bcbc20088fddb9e8cbb58885e8e"},
+    {file = "numpy-1.21.1-cp37-cp37m-win32.whl", hash = "sha256:73101b2a1fef16602696d133db402a7e7586654682244344b8329cdcbbb82172"},
+    {file = "numpy-1.21.1-cp37-cp37m-win_amd64.whl", hash = "sha256:7a708a79c9a9d26904d1cca8d383bf869edf6f8e7650d85dbc77b041e8c5a0f8"},
+    {file = "numpy-1.21.1-cp38-cp38-macosx_10_9_universal2.whl", hash = "sha256:95b995d0c413f5d0428b3f880e8fe1660ff9396dcd1f9eedbc311f37b5652e16"},
+    {file = "numpy-1.21.1-cp38-cp38-macosx_10_9_x86_64.whl", hash = "sha256:635e6bd31c9fb3d475c8f44a089569070d10a9ef18ed13738b03049280281267"},
+    {file = "numpy-1.21.1-cp38-cp38-macosx_11_0_arm64.whl", hash = "sha256:4a3d5fb89bfe21be2ef47c0614b9c9c707b7362386c9a3ff1feae63e0267ccb6"},
+    {file = "numpy-1.21.1-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl", hash = "sha256:8a326af80e86d0e9ce92bcc1e65c8ff88297de4fa14ee936cb2293d414c9ec63"},
+    {file = "numpy-1.21.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:791492091744b0fe390a6ce85cc1bf5149968ac7d5f0477288f78c89b385d9af"},
+    {file = "numpy-1.21.1-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:0318c465786c1f63ac05d7c4dbcecd4d2d7e13f0959b01b534ea1e92202235c5"},
+    {file = "numpy-1.21.1-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.whl", hash = "sha256:9a513bd9c1551894ee3d31369f9b07460ef223694098cf27d399513415855b68"},
+    {file = "numpy-1.21.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl", hash = "sha256:91c6f5fc58df1e0a3cc0c3a717bb3308ff850abdaa6d2d802573ee2b11f674a8"},
+    {file = "numpy-1.21.1-cp38-cp38-win32.whl", hash = "sha256:978010b68e17150db8765355d1ccdd450f9fc916824e8c4e35ee620590e234cd"},
+    {file = "numpy-1.21.1-cp38-cp38-win_amd64.whl", hash = "sha256:9749a40a5b22333467f02fe11edc98f022133ee1bfa8ab99bda5e5437b831214"},
+    {file = "numpy-1.21.1-cp39-cp39-macosx_10_9_universal2.whl", hash = "sha256:d7a4aeac3b94af92a9373d6e77b37691b86411f9745190d2c351f410ab3a791f"},
+    {file = "numpy-1.21.1-cp39-cp39-macosx_10_9_x86_64.whl", hash = "sha256:d9e7912a56108aba9b31df688a4c4f5cb0d9d3787386b87d504762b6754fbb1b"},
+    {file = "numpy-1.21.1-cp39-cp39-macosx_11_0_arm64.whl", hash = "sha256:25b40b98ebdd272bc3020935427a4530b7d60dfbe1ab9381a39147834e985eac"},
+    {file = "numpy-1.21.1-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl", hash = "sha256:8a92c5aea763d14ba9d6475803fc7904bda7decc2a0a68153f587ad82941fec1"},
+    {file = "numpy-1.21.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:05a0f648eb28bae4bcb204e6fd14603de2908de982e761a2fc78efe0f19e96e1"},
+    {file = "numpy-1.21.1-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:f01f28075a92eede918b965e86e8f0ba7b7797a95aa8d35e1cc8821f5fc3ad6a"},
+    {file = "numpy-1.21.1-cp39-cp39-win32.whl", hash = "sha256:88c0b89ad1cc24a5efbb99ff9ab5db0f9a86e9cc50240177a571fbe9c2860ac2"},
+    {file = "numpy-1.21.1-cp39-cp39-win_amd64.whl", hash = "sha256:01721eefe70544d548425a07c80be8377096a54118070b8a62476866d5208e33"},
+    {file = "numpy-1.21.1-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:2d4d1de6e6fb3d28781c73fbde702ac97f03d79e4ffd6598b880b2d95d62ead4"},
+    {file = "numpy-1.21.1.zip", hash = "sha256:dff4af63638afcc57a3dfb9e4b26d434a7a602d225b42d746ea7fe2edf1342fd"},
+]
+nvidia-ml-py = [
+    {file = "nvidia-ml-py-11.450.51.tar.gz", hash = "sha256:5aa6dd23a140b1ef2314eee5ca154a45397b03e68fd9ebc4f72005979f511c73"},
+]
 packaging = [
     {file = "packaging-21.0-py3-none-any.whl", hash = "sha256:c86254f9220d55e31cc94d69bade760f0847da8000def4dfe1c6b872fd14ff14"},
     {file = "packaging-21.0.tar.gz", hash = "sha256:7dc96269f53a4ccec5c0670940a4281106dd0bb343f47b7471f779df49c2fbe7"},
@@ -826,6 +940,10 @@ pygit2 = [
     {file = "pygit2-1.6.1-cp39-cp39-win_amd64.whl", hash = "sha256:f90775afb11f69376e2af21ab56fcfbb52f6bc84117059ddf0355f81e5e36352"},
     {file = "pygit2-1.6.1.tar.gz", hash = "sha256:c3303776f774d3e0115c1c4f6e1fc35470d15f113a7ae9401a0b90acfa1661ac"},
 ]
+pygments = [
+    {file = "Pygments-2.9.0-py3-none-any.whl", hash = "sha256:d66e804411278594d764fc69ec36ec13d9ae9147193a1740cd34d272ca383b8e"},
+    {file = "Pygments-2.9.0.tar.gz", hash = "sha256:a18f47b506a429f6f4b9df81bb02beab9ca21d0a5fee38ed15aef65f0545519f"},
+]
 pylint = [
     {file = "pylint-2.9.5-py3-none-any.whl", hash = "sha256:748f81e5776d6273a6619506e08f1b48ff9bcb8198366a56821cf11aac14fc87"},
     {file = "pylint-2.9.5.tar.gz", hash = "sha256:1f333dc72ef7f5ea166b3230936ebcfb1f3b722e76c980cb9fe6b9f95e8d3172"},
@@ -916,6 +1034,16 @@ regex = [
     {file = "regex-2021.7.6-cp39-cp39-win_amd64.whl", hash = "sha256:4c9c3155fe74269f61e27617529b7f09552fbb12e44b1189cebbdb24294e6e1c"},
     {file = "regex-2021.7.6.tar.gz", hash = "sha256:8394e266005f2d8c6f0bc6780001f7afa3ef81a7a2111fa35058ded6fce79e4d"},
 ]
+rich = [
+    {file = "rich-10.7.0-py3-none-any.whl", hash = "sha256:517b4e0efd064dd1fe821ca93dd3095d73380ceac1f0a07173d507d9b18f1396"},
+    {file = "rich-10.7.0.tar.gz", hash = "sha256:13ac80676e12cf528dc4228dc682c8402f82577c2aa67191e294350fa2c3c4e9"},
+]
+scalene = [
+    {file = "scalene-1.3.12-cp37-abi3-macosx_10_14_universal2.whl", hash = "sha256:85a033b4af6372662f3f328668d021ea1127a763746310244f500b88fb16c288"},
+    {file = "scalene-1.3.12-cp37-abi3-manylinux_2_12_x86_64.manylinux2010_x86_64.manylinux_2_24_x86_64.whl", hash = "sha256:4244cf794dd5e6520abac3ea0131f87b3fff595277a44dbe15296c61499c6421"},
+    {file = "scalene-1.3.12-cp38-abi3-win_amd64.whl", hash = "sha256:da019fc9968c3e47b431b806a28dd157d919fe4db184022a0c73f0e720a2bfb3"},
+    {file = "scalene-1.3.12.tar.gz", hash = "sha256:32139ea505601a44e3806431d09aee2c9e9c15d67f92a6f2857cf61f35d6f7fd"},
+]
 shellingham = [
     {file = "shellingham-1.4.0-py2.py3-none-any.whl", hash = "sha256:536b67a0697f2e4af32ab176c00a50ac2899c5a05e0d8e2dadac8e58888283f9"},
     {file = "shellingham-1.4.0.tar.gz", hash = "sha256:4855c2458d6904829bd34c299f11fdeed7cfefbf8a2c522e4caea6cd76b3171e"},
diff --git a/pyproject.toml b/pyproject.toml
index 752408a..46feed7 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -28,6 +28,7 @@ isort = "^5.8.0"
 pre-commit = "^2.12.1"
 typer-cli = "^0.0.11"
 pylint = "^2.9.3"
+scalene = "^1.3.12"
 
 [build-system]
 requires = ["poetry-core>=1.0.0"]

From e9dc2ad0a5e82e6035ce72d0edc93b24d474c643 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Tue, 10 Aug 2021 12:00:49 +0200
Subject: [PATCH 13/19] Use print instead of echo

---
 pyrepositoryminer/commands/analyze.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pyrepositoryminer/commands/analyze.py b/pyrepositoryminer/commands/analyze.py
index 287e28f..16c1a41 100644
--- a/pyrepositoryminer/commands/analyze.py
+++ b/pyrepositoryminer/commands/analyze.py
@@ -89,4 +89,4 @@ def analyze(
     ) as pool:
         results = (res for res in pool.imap(worker, ids) if res is not None)
         for result in results:
-            echo(result)
+            print(result)

From cc64139580938c53f060ea0e3ef8216b0a58730d Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Tue, 10 Aug 2021 12:01:14 +0200
Subject: [PATCH 14/19] Fix touchedfiles bug

---
 pyrepositoryminer/metrics/utils.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/pyrepositoryminer/metrics/utils.py b/pyrepositoryminer/metrics/utils.py
index 1fceb00..b221b64 100644
--- a/pyrepositoryminer/metrics/utils.py
+++ b/pyrepositoryminer/metrics/utils.py
@@ -15,6 +15,7 @@ def get_touchedfiles(commit: Commit) -> FrozenSet[DiffFile]:
         delta.new_file
         for parent in commit.parents
         for delta in commit.tree.obj.diff_to_tree(parent.tree.obj, swap=True).deltas
+        if delta.status_char() != "D"
     )
 
 

From 9a953a9e99aeacace873a1ba4f686f04d824f64e Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Tue, 10 Aug 2021 12:27:59 +0200
Subject: [PATCH 15/19] Defer imports

---
 pyrepositoryminer/commands/analyze.py        | 105 ++++++++-----------
 pyrepositoryminer/commands/branch.py         |   6 +-
 pyrepositoryminer/commands/clone.py          |   4 +-
 pyrepositoryminer/commands/commits.py        |  36 ++-----
 pyrepositoryminer/commands/utils/__init__.py |   0
 pyrepositoryminer/commands/utils/commits.py  |  28 +++++
 pyrepositoryminer/commands/utils/metric.py   |  53 ++++++++++
 7 files changed, 141 insertions(+), 91 deletions(-)
 create mode 100644 pyrepositoryminer/commands/utils/__init__.py
 create mode 100644 pyrepositoryminer/commands/utils/commits.py
 create mode 100644 pyrepositoryminer/commands/utils/metric.py

diff --git a/pyrepositoryminer/commands/analyze.py b/pyrepositoryminer/commands/analyze.py
index 16c1a41..d2ff39c 100644
--- a/pyrepositoryminer/commands/analyze.py
+++ b/pyrepositoryminer/commands/analyze.py
@@ -1,61 +1,48 @@
-from enum import Enum
-from functools import reduce
-from importlib import import_module
-from inspect import isclass
-from multiprocessing import Pool
+from contextlib import contextmanager
 from pathlib import Path
-from sys import stdin
-from typing import List, Optional
+from typing import TYPE_CHECKING, Iterator, List, Optional
 
-from typer import Abort, Argument, Option, echo
+from typer import Argument, Option
 from typer.models import FileText
 
-from pyrepositoryminer.analyze import InitArgs, initialize, worker
-from pyrepositoryminer.metrics import all_metrics
-from pyrepositoryminer.metrics.diffblob.main import DiffBlobMetric
-from pyrepositoryminer.metrics.diffdir.main import DiffDirMetric
-from pyrepositoryminer.metrics.dir.main import DirMetric
-from pyrepositoryminer.metrics.nativeblob.main import NativeBlobMetric
-from pyrepositoryminer.metrics.nativetree.main import NativeTreeMetric
+from pyrepositoryminer.commands.utils.metric import AvailableMetrics
 
-AvailableMetrics = Enum(  # type: ignore
-    # https://github.com/python/mypy/issues/5317
-    "AvailableMetrics",
-    [(k, k) for k in sorted(all_metrics.keys())],
-)
+if TYPE_CHECKING:
+    from multiprocessing.pool import Pool as tcpool
 
 
-def import_metric(import_str: str):  # type: ignore  # TODO make this a metric abc
-    module_str, _, attrs_str = import_str.partition(":")
-    if not module_str or not attrs_str:
-        echo(f'Import string "{import_str}" must be in format "<module>:<attribute>"')
-        raise Abort()
-    try:
-        module = import_module(module_str)
-    except ImportError as e:
-        if e.name != module_str:
-            raise e from None
-        echo(f'Could not import module "{module_str}"')
-        raise Abort() from e
-    try:
-        instance = reduce(getattr, (module, *attrs_str.split(".")))  # type: ignore
-    except AttributeError as e:
-        print(f'Attribute "{attrs_str}" not found in module "{module_str}"')
-        raise Abort() from e
-    if not isclass(instance):
-        print(f'Instance "{instance}" must be a class')
-        raise Abort()
-    parents = (
-        NativeBlobMetric,
-        DiffBlobMetric,
-        NativeTreeMetric,
-        DirMetric,
-        DiffDirMetric,
+@contextmanager
+def make_pool(
+    workers: int,
+    repository: Path,
+    metrics: List[AvailableMetrics],
+    custom_metrics: List[str],
+) -> Iterator["tcpool"]:
+    from multiprocessing import Pool  # pylint: disable=import-outside-toplevel
+
+    from pyrepositoryminer.analyze import (  # pylint: disable=import-outside-toplevel
+        InitArgs,
+        initialize,
+    )
+    from pyrepositoryminer.commands.utils.metric import (  # pylint: disable=import-outside-toplevel
+        import_metric,
+    )
+    from pyrepositoryminer.metrics import (  # pylint: disable=import-outside-toplevel
+        all_metrics,
     )
-    if not any(issubclass(instance, parent) for parent in parents):  # type: ignore
-        print(f'Instance "{instance}" must subclass a pyrepositoryminer metric class')
-        raise Abort()
-    return instance
+
+    with Pool(
+        max(workers, 1),
+        initialize,
+        (
+            InitArgs(
+                repository,
+                tuple({metric.value for metric in metrics} & all_metrics.keys()),
+                tuple(map(import_metric, set(custom_metrics))),
+            ),
+        ),
+    ) as pool:
+        yield pool
 
 
 def analyze(
@@ -71,22 +58,18 @@ def analyze(
     """Analyze commits of a repository.
 
     Either provide the commit ids to analyze on stdin or as a file argument."""
+    from sys import stdin  # pylint: disable=import-outside-toplevel
+
+    from pyrepositoryminer.analyze import (  # pylint: disable=import-outside-toplevel
+        worker,
+    )
+
     metrics = metrics if metrics else []
     ids = (
         id.strip()
         for id in (commits if commits else stdin)  # pylint: disable=superfluous-parens
     )
-    with Pool(
-        max(workers, 1),
-        initialize,
-        (
-            InitArgs(
-                repository,
-                tuple({metric.value for metric in metrics} & all_metrics.keys()),
-                tuple(map(import_metric, set(custom_metrics))),
-            ),
-        ),
-    ) as pool:
+    with make_pool(workers, repository, metrics, custom_metrics) as pool:
         results = (res for res in pool.imap(worker, ids) if res is not None)
         for result in results:
             print(result)
diff --git a/pyrepositoryminer/commands/branch.py b/pyrepositoryminer/commands/branch.py
index cc685f7..30b282d 100644
--- a/pyrepositoryminer/commands/branch.py
+++ b/pyrepositoryminer/commands/branch.py
@@ -1,8 +1,7 @@
 from pathlib import Path
 from typing import Iterable
 
-from pygit2 import Repository
-from typer import Argument, echo
+from typer import Argument
 
 
 def branch(
@@ -11,6 +10,9 @@ def branch(
     remote: bool = False,
 ) -> None:
     """Get the branches of a repository."""
+    from pygit2 import Repository  # pylint: disable=import-outside-toplevel
+    from typer import echo  # pylint: disable=import-outside-toplevel
+
     repo = Repository(repository)
     branches: Iterable[str]
     if local and remote:
diff --git a/pyrepositoryminer/commands/clone.py b/pyrepositoryminer/commands/clone.py
index 784da07..4ec89e4 100644
--- a/pyrepositoryminer/commands/clone.py
+++ b/pyrepositoryminer/commands/clone.py
@@ -1,8 +1,8 @@
 from pathlib import Path
 
-from pygit2 import clone_repository
-
 
 def clone(url: str, path: Path, bare: bool = True) -> None:
     "Clone a repository to a path."
+    from pygit2 import clone_repository  # pylint: disable=import-outside-toplevel
+
     clone_repository(url, path, bare=bare)
diff --git a/pyrepositoryminer/commands/commits.py b/pyrepositoryminer/commands/commits.py
index df12571..b05b033 100644
--- a/pyrepositoryminer/commands/commits.py
+++ b/pyrepositoryminer/commands/commits.py
@@ -1,8 +1,8 @@
 from enum import Enum
-from itertools import filterfalse, islice
+from itertools import islice
 from pathlib import Path
 from sys import stdin
-from typing import Hashable, Iterable, Optional, Set, TypeVar
+from typing import Hashable, Iterable, Optional, TypeVar
 
 from pygit2 import (
     GIT_SORT_NONE,
@@ -10,9 +10,8 @@
     GIT_SORT_TIME,
     GIT_SORT_TOPOLOGICAL,
     Repository,
-    Walker,
 )
-from typer import Argument, Option, echo
+from typer import Argument, Option
 
 
 class Sort(str, Enum):
@@ -36,28 +35,6 @@ def flag(self):  # type: ignore
 T = TypeVar("T", bound=Hashable)
 
 
-def iter_distinct(iterable: Iterable[T]) -> Iterable[T]:
-    seen: Set[T] = set()
-    for element in filterfalse(seen.__contains__, iterable):
-        seen.add(element)
-        yield element
-
-
-def generate_walkers(
-    repo: Repository,
-    branch_names: Iterable[str],
-    simplify_first_parent: bool,
-    sorting: int,
-) -> Iterable[Walker]:
-    walkers = tuple(
-        repo.walk(repo.branches[branch_name].peel().id, sorting)
-        for branch_name in branch_names
-    )
-    for walker in walkers if simplify_first_parent else tuple():
-        walker.simplify_first_parent()
-    yield from walkers
-
-
 def commits(
     repository: Path = Argument(..., help="The path to the bare repository."),
     branches: Path = Argument(
@@ -79,6 +56,13 @@ def commits(
     """Get the commit ids of a repository.
 
     Either provide the branches to get the commit ids from on stdin or as a file argument."""  # pylint: disable=line-too-long
+    from typer import echo  # pylint: disable=import-outside-toplevel
+
+    from pyrepositoryminer.commands.utils.commits import (  # pylint: disable=import-outside-toplevel
+        generate_walkers,
+        iter_distinct,
+    )
+
     branch_names: Iterable[str]
     if branches != Path("-"):
         with open(branches) as f:
diff --git a/pyrepositoryminer/commands/utils/__init__.py b/pyrepositoryminer/commands/utils/__init__.py
new file mode 100644
index 0000000..e69de29
diff --git a/pyrepositoryminer/commands/utils/commits.py b/pyrepositoryminer/commands/utils/commits.py
new file mode 100644
index 0000000..bcd97f0
--- /dev/null
+++ b/pyrepositoryminer/commands/utils/commits.py
@@ -0,0 +1,28 @@
+from itertools import filterfalse
+from typing import Hashable, Iterable, Set, TypeVar
+
+from pygit2 import Repository, Walker
+
+T = TypeVar("T", bound=Hashable)
+
+
+def iter_distinct(iterable: Iterable[T]) -> Iterable[T]:
+    seen: Set[T] = set()
+    for element in filterfalse(seen.__contains__, iterable):
+        seen.add(element)
+        yield element
+
+
+def generate_walkers(
+    repo: Repository,
+    branch_names: Iterable[str],
+    simplify_first_parent: bool,
+    sorting: int,
+) -> Iterable[Walker]:
+    walkers = tuple(
+        repo.walk(repo.branches[branch_name].peel().id, sorting)
+        for branch_name in branch_names
+    )
+    for walker in walkers if simplify_first_parent else tuple():
+        walker.simplify_first_parent()
+    yield from walkers
diff --git a/pyrepositoryminer/commands/utils/metric.py b/pyrepositoryminer/commands/utils/metric.py
new file mode 100644
index 0000000..64ab953
--- /dev/null
+++ b/pyrepositoryminer/commands/utils/metric.py
@@ -0,0 +1,53 @@
+from enum import Enum
+from functools import reduce
+from inspect import isclass
+
+from typer import Abort, echo
+
+from pyrepositoryminer.metrics import all_metrics
+from pyrepositoryminer.metrics.diffblob.main import DiffBlobMetric
+from pyrepositoryminer.metrics.diffdir.main import DiffDirMetric
+from pyrepositoryminer.metrics.dir.main import DirMetric
+from pyrepositoryminer.metrics.nativeblob.main import NativeBlobMetric
+from pyrepositoryminer.metrics.nativetree.main import NativeTreeMetric
+
+AvailableMetrics = Enum(  # type: ignore
+    # https://github.com/python/mypy/issues/5317
+    "AvailableMetrics",
+    [(k, k) for k in sorted(all_metrics.keys())],
+)
+
+
+def import_metric(import_str: str):  # type: ignore  # TODO make this a metric abc
+    from importlib import import_module  # pylint: disable=import-outside-toplevel
+
+    module_str, _, attrs_str = import_str.partition(":")
+    if not module_str or not attrs_str:
+        echo(f'Import string "{import_str}" must be in format "<module>:<attribute>"')
+        raise Abort()
+    try:
+        module = import_module(module_str)
+    except ImportError as e:
+        if e.name != module_str:
+            raise e from None
+        echo(f'Could not import module "{module_str}"')
+        raise Abort() from e
+    try:
+        instance = reduce(getattr, (module, *attrs_str.split(".")))  # type: ignore
+    except AttributeError as e:
+        print(f'Attribute "{attrs_str}" not found in module "{module_str}"')
+        raise Abort() from e
+    if not isclass(instance):
+        print(f'Instance "{instance}" must be a class')
+        raise Abort()
+    parents = (
+        NativeBlobMetric,
+        DiffBlobMetric,
+        NativeTreeMetric,
+        DirMetric,
+        DiffDirMetric,
+    )
+    if not any(issubclass(instance, parent) for parent in parents):  # type: ignore
+        print(f'Instance "{instance}" must subclass a pyrepositoryminer metric class')
+        raise Abort()
+    return instance

From 4f1f0b69bc9e074b9900004299fe40cdc1890b0e Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Tue, 10 Aug 2021 13:24:56 +0200
Subject: [PATCH 16/19] Fix analyze script

---
 scripts/profile_analyze.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/scripts/profile_analyze.py b/scripts/profile_analyze.py
index b960ae9..f684d45 100644
--- a/scripts/profile_analyze.py
+++ b/scripts/profile_analyze.py
@@ -4,7 +4,8 @@
 
 from typer import FileText
 
-from pyrepositoryminer.commands.analyze import AvailableMetrics, analyze
+from pyrepositoryminer.commands.analyze import analyze
+from pyrepositoryminer.commands.utils.metric import AvailableMetrics
 
 
 def main() -> None:

From 3121f2ec14d8f4c235ca2752f70cc896ef7bc845 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Tue, 10 Aug 2021 13:25:29 +0200
Subject: [PATCH 17/19] Add measure_pylinecount

---
 scripts/measure_pylinecount.sh | 1 +
 1 file changed, 1 insertion(+)
 create mode 100644 scripts/measure_pylinecount.sh

diff --git a/scripts/measure_pylinecount.sh b/scripts/measure_pylinecount.sh
new file mode 100644
index 0000000..1a87637
--- /dev/null
+++ b/scripts/measure_pylinecount.sh
@@ -0,0 +1 @@
+hyperfine --warmup 1 --runs 3 --export-json out_02_01.json --parameter-list repo numpy,pandas,matplotlib,tensorflow 'pyrepositoryminer branch ./{repo}.git | pyrepositoryminer commits --limit 100 ./{repo}.git | pyrepositoryminer analyze ./{repo}.git pylinecount'
\ No newline at end of file

From fd3e893fde05e5d34c8b767b7c8a9cb61e964910 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Tue, 28 Sep 2021 18:32:03 +0200
Subject: [PATCH 18/19] Update dependencies

---
 poetry.lock | 224 ++++++++++++++++++++++++++--------------------------
 1 file changed, 112 insertions(+), 112 deletions(-)

diff --git a/poetry.lock b/poetry.lock
index ff4cdf3..e3ceb9b 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,14 +1,6 @@
-[[package]]
-name = "appdirs"
-version = "1.4.4"
-description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
-category = "dev"
-optional = false
-python-versions = "*"
-
 [[package]]
 name = "astroid"
-version = "2.6.5"
+version = "2.8.0"
 description = "An abstract syntax tree for Python with inference support."
 category = "dev"
 optional = false
@@ -16,6 +8,7 @@ python-versions = "~=3.6"
 
 [package.dependencies]
 lazy-object-proxy = ">=1.4.0"
+typing-extensions = {version = ">=3.10", markers = "python_version < \"3.10\""}
 wrapt = ">=1.11,<1.13"
 
 [[package]]
@@ -54,23 +47,28 @@ testing = ["pytest (>=4.6)", "pytest-flake8", "pytest-cov", "pytest-black (>=0.3
 
 [[package]]
 name = "black"
-version = "21.7b0"
+version = "21.9b0"
 description = "The uncompromising code formatter."
 category = "dev"
 optional = false
 python-versions = ">=3.6.2"
 
 [package.dependencies]
-appdirs = "*"
 click = ">=7.1.2"
 mypy-extensions = ">=0.4.3"
-pathspec = ">=0.8.1,<1"
+pathspec = ">=0.9.0,<1"
+platformdirs = ">=2"
 regex = ">=2020.1.8"
 tomli = ">=0.2.6,<2.0.0"
+typing-extensions = [
+    {version = ">=3.10.0.0", markers = "python_version < \"3.10\""},
+    {version = "!=3.10.0.1", markers = "python_version >= \"3.10\""},
+]
 
 [package.extras]
 colorama = ["colorama (>=0.4.3)"]
 d = ["aiohttp (>=3.6.0)", "aiohttp-cors (>=0.4.0)"]
+jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"]
 python2 = ["typed-ast (>=1.4.2)"]
 uvloop = ["uvloop (>=0.15.2)"]
 
@@ -87,7 +85,7 @@ pycparser = "*"
 
 [[package]]
 name = "cfgv"
-version = "3.3.0"
+version = "3.3.1"
 description = "Validate configuration and produce human readable error messages."
 category = "dev"
 optional = false
@@ -103,11 +101,11 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
 [[package]]
 name = "cloudpickle"
-version = "1.6.0"
+version = "2.0.0"
 description = "Extended pickling support for Python objects"
 category = "dev"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.6"
 
 [[package]]
 name = "colorama"
@@ -130,7 +128,7 @@ test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"]
 
 [[package]]
 name = "distlib"
-version = "0.3.2"
+version = "0.3.3"
 description = "Distribution utilities"
 category = "dev"
 optional = false
@@ -138,11 +136,15 @@ python-versions = "*"
 
 [[package]]
 name = "filelock"
-version = "3.0.12"
+version = "3.1.0"
 description = "A platform independent file lock."
 category = "dev"
 optional = false
-python-versions = "*"
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
+
+[package.extras]
+docs = ["furo (>=2021.8.17b43)", "sphinx (>=4.1)", "sphinx-autodoc-typehints (>=1.12)"]
+testing = ["coverage (>=4)", "pytest (>=4)", "pytest-cov"]
 
 [[package]]
 name = "flake8"
@@ -178,7 +180,7 @@ python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 
 [[package]]
 name = "identify"
-version = "2.2.11"
+version = "2.2.15"
 description = "File identification library for Python"
 category = "dev"
 optional = false
@@ -204,7 +206,7 @@ testing = ["packaging", "pep517", "unittest2", "importlib-resources (>=1.3)"]
 
 [[package]]
 name = "isort"
-version = "5.9.2"
+version = "5.9.3"
 description = "A Python utility / library to sort Python imports."
 category = "dev"
 optional = false
@@ -248,7 +250,7 @@ python-versions = "*"
 
 [[package]]
 name = "more-itertools"
-version = "8.8.0"
+version = "8.10.0"
 description = "More routines for operating on iterables, beyond itertools"
 category = "dev"
 optional = false
@@ -323,7 +325,7 @@ python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
 
 [[package]]
 name = "platformdirs"
-version = "2.1.0"
+version = "2.4.0"
 description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
 category = "dev"
 optional = false
@@ -346,7 +348,7 @@ dev = ["pre-commit", "tox"]
 
 [[package]]
 name = "pre-commit"
-version = "2.13.0"
+version = "2.15.0"
 description = "A framework for managing and maintaining multi-language pre-commit hooks."
 category = "dev"
 optional = false
@@ -405,7 +407,7 @@ cffi = ">=1.4.0"
 
 [[package]]
 name = "pygments"
-version = "2.9.0"
+version = "2.10.0"
 description = "Pygments is a syntax highlighting package written in Python."
 category = "dev"
 optional = false
@@ -413,18 +415,20 @@ python-versions = ">=3.5"
 
 [[package]]
 name = "pylint"
-version = "2.9.5"
+version = "2.11.1"
 description = "python code static checker"
 category = "dev"
 optional = false
 python-versions = "~=3.6"
 
 [package.dependencies]
-astroid = ">=2.6.5,<2.7"
+astroid = ">=2.8.0,<2.9"
 colorama = {version = "*", markers = "sys_platform == \"win32\""}
 isort = ">=4.2.5,<6"
 mccabe = ">=0.6,<0.7"
+platformdirs = ">=2.2.0"
 toml = ">=0.7.1"
+typing-extensions = {version = ">=3.10.0", markers = "python_version < \"3.10\""}
 
 [[package]]
 name = "pyparsing"
@@ -480,7 +484,7 @@ mando = ">=0.6,<0.7"
 
 [[package]]
 name = "regex"
-version = "2021.7.6"
+version = "2021.9.24"
 description = "Alternative regular expression module, to replace re."
 category = "dev"
 optional = false
@@ -488,7 +492,7 @@ python-versions = "*"
 
 [[package]]
 name = "rich"
-version = "10.7.0"
+version = "10.11.0"
 description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal"
 category = "dev"
 optional = false
@@ -542,7 +546,7 @@ python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 
 [[package]]
 name = "tomli"
-version = "1.1.0"
+version = "1.2.1"
 description = "A lil' TOML parser"
 category = "dev"
 optional = false
@@ -591,7 +595,7 @@ typer = ">=0.3.0,<0.4.0"
 
 [[package]]
 name = "typing-extensions"
-version = "3.10.0.0"
+version = "3.10.0.2"
 description = "Backported and Experimental Type Hints for Python 3.5+"
 category = "dev"
 optional = false
@@ -612,7 +616,7 @@ test = ["aiohttp", "flake8 (>=3.8.4,<3.9.0)", "psutil", "pycodestyle (>=2.6.0,<2
 
 [[package]]
 name = "virtualenv"
-version = "20.6.0"
+version = "20.8.1"
 description = "Virtual Python Environment builder"
 category = "dev"
 optional = false
@@ -627,7 +631,7 @@ six = ">=1.9.0,<2"
 
 [package.extras]
 docs = ["proselint (>=0.10.2)", "sphinx (>=3)", "sphinx-argparse (>=0.2.5)", "sphinx-rtd-theme (>=0.4.3)", "towncrier (>=19.9.0rc1)"]
-testing = ["coverage (>=4)", "coverage-enable-subprocess (>=1)", "flaky (>=3)", "pytest (>=4)", "pytest-env (>=0.6.2)", "pytest-freezegun (>=0.4.1)", "pytest-mock (>=2)", "pytest-randomly (>=1)", "pytest-timeout (>=1)", "packaging (>=20.0)", "xonsh (>=0.9.16)"]
+testing = ["coverage (>=4)", "coverage-enable-subprocess (>=1)", "flaky (>=3)", "pytest (>=4)", "pytest-env (>=0.6.2)", "pytest-freezegun (>=0.4.1)", "pytest-mock (>=2)", "pytest-randomly (>=1)", "pytest-timeout (>=1)", "packaging (>=20.0)"]
 
 [[package]]
 name = "wcwidth"
@@ -663,13 +667,9 @@ python-versions = "^3.9"
 content-hash = "9d1826bb458af750e6d7e8e14e6ad2f24c54d12f61939932ac0864b5e59b2776"
 
 [metadata.files]
-appdirs = [
-    {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"},
-    {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"},
-]
 astroid = [
-    {file = "astroid-2.6.5-py3-none-any.whl", hash = "sha256:7b963d1c590d490f60d2973e57437115978d3a2529843f160b5003b721e1e925"},
-    {file = "astroid-2.6.5.tar.gz", hash = "sha256:83e494b02d75d07d4e347b27c066fd791c0c74fc96c613d1ea3de0c82c48168f"},
+    {file = "astroid-2.8.0-py3-none-any.whl", hash = "sha256:dcc06f6165f415220013801642bd6c9808a02967070919c4b746c6864c205471"},
+    {file = "astroid-2.8.0.tar.gz", hash = "sha256:fe81f80c0b35264acb5653302ffbd935d394f1775c5e4487df745bf9c2442708"},
 ]
 atomicwrites = [
     {file = "atomicwrites-1.4.0-py2.py3-none-any.whl", hash = "sha256:6d1784dea7c0c8d4a5172b6c620f40b6e4cbfdf96d783691f2e1302a7b88e197"},
@@ -684,8 +684,8 @@ attrs = [
     {file = "backports.entry_points_selectable-1.1.0.tar.gz", hash = "sha256:988468260ec1c196dab6ae1149260e2f5472c9110334e5d51adcb77867361f6a"},
 ]
 black = [
-    {file = "black-21.7b0-py3-none-any.whl", hash = "sha256:1c7aa6ada8ee864db745b22790a32f94b2795c253a75d6d9b5e439ff10d23116"},
-    {file = "black-21.7b0.tar.gz", hash = "sha256:c8373c6491de9362e39271630b65b964607bc5c79c83783547d76c839b3aa219"},
+    {file = "black-21.9b0-py3-none-any.whl", hash = "sha256:380f1b5da05e5a1429225676655dddb96f5ae8c75bdf91e53d798871b902a115"},
+    {file = "black-21.9b0.tar.gz", hash = "sha256:7de4cfc7eb6b710de325712d40125689101d21d25283eed7e9998722cf10eb91"},
 ]
 cffi = [
     {file = "cffi-1.14.6-cp27-cp27m-macosx_10_9_x86_64.whl", hash = "sha256:22b9c3c320171c108e903d61a3723b51e37aaa8c81255b5e7ce102775bd01e2c"},
@@ -730,16 +730,16 @@ cffi = [
     {file = "cffi-1.14.6.tar.gz", hash = "sha256:c9a875ce9d7fe32887784274dd533c57909b7b1dcadcc128a2ac21331a9765dd"},
 ]
 cfgv = [
-    {file = "cfgv-3.3.0-py2.py3-none-any.whl", hash = "sha256:b449c9c6118fe8cca7fa5e00b9ec60ba08145d281d52164230a69211c5d597a1"},
-    {file = "cfgv-3.3.0.tar.gz", hash = "sha256:9e600479b3b99e8af981ecdfc80a0296104ee610cab48a5ae4ffd0b668650eb1"},
+    {file = "cfgv-3.3.1-py2.py3-none-any.whl", hash = "sha256:c6a0883f3917a037485059700b9e75da2464e6c27051014ad85ba6aaa5884426"},
+    {file = "cfgv-3.3.1.tar.gz", hash = "sha256:f5a830efb9ce7a445376bb66ec94c638a9787422f96264c98edc6bdeed8ab736"},
 ]
 click = [
     {file = "click-7.1.2-py2.py3-none-any.whl", hash = "sha256:dacca89f4bfadd5de3d7489b7c8a566eee0d3676333fbb50030263894c38c0dc"},
     {file = "click-7.1.2.tar.gz", hash = "sha256:d2b5255c7c6349bc1bd1e59e08cd12acbbd63ce649f2588755783aa94dfb6b1a"},
 ]
 cloudpickle = [
-    {file = "cloudpickle-1.6.0-py3-none-any.whl", hash = "sha256:3a32d0eb0bc6f4d0c57fbc4f3e3780f7a81e6fee0fa935072884d58ae8e1cc7c"},
-    {file = "cloudpickle-1.6.0.tar.gz", hash = "sha256:9bc994f9e9447593bd0a45371f0e7ac7333710fcf64a4eb9834bf149f4ef2f32"},
+    {file = "cloudpickle-2.0.0-py3-none-any.whl", hash = "sha256:6b2df9741d06f43839a3275c4e6632f7df6487a1f181f5f46a052d3c917c3d11"},
+    {file = "cloudpickle-2.0.0.tar.gz", hash = "sha256:5cd02f3b417a783ba84a4ec3e290ff7929009fe51f6405423cfccfadd43ba4a4"},
 ]
 colorama = [
     {file = "colorama-0.4.4-py2.py3-none-any.whl", hash = "sha256:9f47eda37229f68eee03b24b9748937c7dc3868f906e8ba69fbcbdd3bc5dc3e2"},
@@ -750,12 +750,12 @@ commonmark = [
     {file = "commonmark-0.9.1.tar.gz", hash = "sha256:452f9dc859be7f06631ddcb328b6919c67984aca654e5fefb3914d54691aed60"},
 ]
 distlib = [
-    {file = "distlib-0.3.2-py2.py3-none-any.whl", hash = "sha256:23e223426b28491b1ced97dc3bbe183027419dfc7982b4fa2f05d5f3ff10711c"},
-    {file = "distlib-0.3.2.zip", hash = "sha256:106fef6dc37dd8c0e2c0a60d3fca3e77460a48907f335fa28420463a6f799736"},
+    {file = "distlib-0.3.3-py2.py3-none-any.whl", hash = "sha256:c8b54e8454e5bf6237cc84c20e8264c3e991e824ef27e8f1e81049867d861e31"},
+    {file = "distlib-0.3.3.zip", hash = "sha256:d982d0751ff6eaaab5e2ec8e691d949ee80eddf01a62eaa96ddb11531fe16b05"},
 ]
 filelock = [
-    {file = "filelock-3.0.12-py3-none-any.whl", hash = "sha256:929b7d63ec5b7d6b71b0fa5ac14e030b3f70b75747cef1b10da9b879fef15836"},
-    {file = "filelock-3.0.12.tar.gz", hash = "sha256:18d82244ee114f543149c66a6e0c14e9c4f8a1044b5cdaadd0f82159d6a6ff59"},
+    {file = "filelock-3.1.0-py2.py3-none-any.whl", hash = "sha256:d9e9c7d8191e915339843c81c90d3e44f7c84e5fb03bdc6b1b4d019025cf953b"},
+    {file = "filelock-3.1.0.tar.gz", hash = "sha256:78925788ce8c8945fac28a68c1d05cf33a6a6c4fba14fe02835122c53268ceef"},
 ]
 flake8 = [
     {file = "flake8-3.9.2-py2.py3-none-any.whl", hash = "sha256:bf8fd333346d844f616e8d47905ef3a3384edae6b4e9beb0c5101e25e3110907"},
@@ -769,16 +769,16 @@ future = [
     {file = "future-0.18.2.tar.gz", hash = "sha256:b1bead90b70cf6ec3f0710ae53a525360fa360d306a86583adc6bf83a4db537d"},
 ]
 identify = [
-    {file = "identify-2.2.11-py2.py3-none-any.whl", hash = "sha256:7abaecbb414e385752e8ce02d8c494f4fbc780c975074b46172598a28f1ab839"},
-    {file = "identify-2.2.11.tar.gz", hash = "sha256:a0e700637abcbd1caae58e0463861250095dfe330a8371733a471af706a4a29a"},
+    {file = "identify-2.2.15-py2.py3-none-any.whl", hash = "sha256:de83a84d774921669774a2000bf87ebba46b4d1c04775f4a5d37deff0cf39f73"},
+    {file = "identify-2.2.15.tar.gz", hash = "sha256:528a88021749035d5a39fe2ba67c0642b8341aaf71889da0e1ed669a429b87f0"},
 ]
 importlib-metadata = [
     {file = "importlib_metadata-2.1.1-py2.py3-none-any.whl", hash = "sha256:c2d6341ff566f609e89a2acb2db190e5e1d23d5409d6cc8d2fe34d72443876d4"},
     {file = "importlib_metadata-2.1.1.tar.gz", hash = "sha256:b8de9eff2b35fb037368f28a7df1df4e6436f578fa74423505b6c6a778d5b5dd"},
 ]
 isort = [
-    {file = "isort-5.9.2-py3-none-any.whl", hash = "sha256:eed17b53c3e7912425579853d078a0832820f023191561fcee9d7cae424e0813"},
-    {file = "isort-5.9.2.tar.gz", hash = "sha256:f65ce5bd4cbc6abdfbe29afc2f0245538ab358c14590912df638033f157d555e"},
+    {file = "isort-5.9.3-py3-none-any.whl", hash = "sha256:e17d6e2b81095c9db0a03a8025a957f334d6ea30b26f9ec70805411e5c7c81f2"},
+    {file = "isort-5.9.3.tar.gz", hash = "sha256:9c2ea1e62d871267b78307fe511c0838ba0da28698c5732d54e2790bf3ba9899"},
 ]
 lazy-object-proxy = [
     {file = "lazy-object-proxy-1.6.0.tar.gz", hash = "sha256:489000d368377571c6f982fba6497f2aa13c6d1facc40660963da62f5c379726"},
@@ -813,8 +813,8 @@ mccabe = [
     {file = "mccabe-0.6.1.tar.gz", hash = "sha256:dd8d182285a0fe56bace7f45b5e7d1a6ebcbf524e8f3bd87eb0f125271b8831f"},
 ]
 more-itertools = [
-    {file = "more-itertools-8.8.0.tar.gz", hash = "sha256:83f0308e05477c68f56ea3a888172c78ed5d5b3c282addb67508e7ba6c8f813a"},
-    {file = "more_itertools-8.8.0-py3-none-any.whl", hash = "sha256:2cf89ec599962f2ddc4d568a05defc40e0a587fbc10d5989713638864c36be4d"},
+    {file = "more-itertools-8.10.0.tar.gz", hash = "sha256:1debcabeb1df793814859d64a81ad7cb10504c24349368ccf214c664c474f41f"},
+    {file = "more_itertools-8.10.0-py3-none-any.whl", hash = "sha256:56ddac45541718ba332db05f464bebfb0768110111affd27f66e0051f276fa43"},
 ]
 mypy = [
     {file = "mypy-0.812-cp35-cp35m-macosx_10_9_x86_64.whl", hash = "sha256:a26f8ec704e5a7423c8824d425086705e381b4f1dfdef6e3a1edab7ba174ec49"},
@@ -890,16 +890,16 @@ pathspec = [
     {file = "pathspec-0.9.0.tar.gz", hash = "sha256:e564499435a2673d586f6b2130bb5b95f04a3ba06f81b8f895b651a3c76aabb1"},
 ]
 platformdirs = [
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+    {file = "regex-2021.9.24-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:dcbbc9cfa147d55a577d285fd479b43103188855074552708df7acc31a476dd9"},
+    {file = "regex-2021.9.24-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:29385c4dbb3f8b3a55ce13de6a97a3d21bd00de66acd7cdfc0b49cb2f08c906c"},
+    {file = "regex-2021.9.24-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.manylinux_2_12_i686.manylinux2010_i686.whl", hash = "sha256:c50a6379763c733562b1fee877372234d271e5c78cd13ade5f25978aa06744db"},
+    {file = "regex-2021.9.24-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:6f74b6d8f59f3cfb8237e25c532b11f794b96f5c89a6f4a25857d85f84fbef11"},
+    {file = "regex-2021.9.24-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl", hash = "sha256:6c4d83d21d23dd854ffbc8154cf293f4e43ba630aa9bd2539c899343d7f59da3"},
+    {file = "regex-2021.9.24-cp39-cp39-win32.whl", hash = "sha256:95e89a8558c8c48626dcffdf9c8abac26b7c251d352688e7ab9baf351e1c7da6"},
+    {file = "regex-2021.9.24-cp39-cp39-win_amd64.whl", hash = "sha256:835962f432bce92dc9bf22903d46c50003c8d11b1dc64084c8fae63bca98564a"},
+    {file = "regex-2021.9.24.tar.gz", hash = "sha256:6266fde576e12357b25096351aac2b4b880b0066263e7bc7a9a1b4307991bb0e"},
 ]
 rich = [
-    {file = "rich-10.7.0-py3-none-any.whl", hash = "sha256:517b4e0efd064dd1fe821ca93dd3095d73380ceac1f0a07173d507d9b18f1396"},
-    {file = "rich-10.7.0.tar.gz", hash = "sha256:13ac80676e12cf528dc4228dc682c8402f82577c2aa67191e294350fa2c3c4e9"},
+    {file = "rich-10.11.0-py3-none-any.whl", hash = "sha256:44bb3f9553d00b3c8938abf89828df870322b9ba43caf3b12bb7758debdc6dec"},
+    {file = "rich-10.11.0.tar.gz", hash = "sha256:016fa105f34b69c434e7f908bb5bd7fefa9616efdb218a2917117683a6394ce5"},
 ]
 scalene = [
     {file = "scalene-1.3.12-cp37-abi3-macosx_10_14_universal2.whl", hash = "sha256:85a033b4af6372662f3f328668d021ea1127a763746310244f500b88fb16c288"},
@@ -1057,8 +1057,8 @@ toml = [
     {file = "toml-0.10.2.tar.gz", hash = "sha256:b3bda1d108d5dd99f4a20d24d9c348e91c4db7ab1b749200bded2f839ccbe68f"},
 ]
 tomli = [
-    {file = "tomli-1.1.0-py3-none-any.whl", hash = "sha256:f4a182048010e89cbec0ae4686b21f550a7f2903f665e34a6de58ec15424f919"},
-    {file = "tomli-1.1.0.tar.gz", hash = "sha256:33d7984738f8bb699c9b0a816eb646a8178a69eaa792d258486776a5d21b8ca5"},
+    {file = "tomli-1.2.1-py3-none-any.whl", hash = "sha256:8dd0e9524d6f386271a36b41dbf6c57d8e32fd96fd22b6584679dc569d20899f"},
+    {file = "tomli-1.2.1.tar.gz", hash = "sha256:a5b75cb6f3968abb47af1b40c1819dc519ea82bcc065776a866e8d74c5ca9442"},
 ]
 typed-ast = [
     {file = "typed_ast-1.4.3-cp35-cp35m-manylinux1_i686.whl", hash = "sha256:2068531575a125b87a41802130fa7e29f26c09a2833fea68d9a40cf33902eba6"},
@@ -1101,9 +1101,9 @@ typer-cli = [
     {file = "typer_cli-0.0.11-py3-none-any.whl", hash = "sha256:ecff43bc8c5d786deaa25b7d14ebfc59b32e40b07895259c3e86604af188f39b"},
 ]
 typing-extensions = [
-    {file = "typing_extensions-3.10.0.0-py2-none-any.whl", hash = "sha256:0ac0f89795dd19de6b97debb0c6af1c70987fd80a2d62d1958f7e56fcc31b497"},
-    {file = "typing_extensions-3.10.0.0-py3-none-any.whl", hash = "sha256:779383f6086d90c99ae41cf0ff39aac8a7937a9283ce0a414e5dd782f4c94a84"},
-    {file = "typing_extensions-3.10.0.0.tar.gz", hash = "sha256:50b6f157849174217d0656f99dc82fe932884fb250826c18350e159ec6cdf342"},
+    {file = "typing_extensions-3.10.0.2-py2-none-any.whl", hash = "sha256:d8226d10bc02a29bcc81df19a26e56a9647f8b0a6d4a83924139f4a8b01f17b7"},
+    {file = "typing_extensions-3.10.0.2-py3-none-any.whl", hash = "sha256:f1d25edafde516b146ecd0613dabcc61409817af4766fbbcfb8d1ad4ec441a34"},
+    {file = "typing_extensions-3.10.0.2.tar.gz", hash = "sha256:49f75d16ff11f1cd258e1b988ccff82a3ca5570217d7ad8c5f48205dd99a677e"},
 ]
 uvloop = [
     {file = "uvloop-0.15.3-cp37-cp37m-macosx_10_14_x86_64.whl", hash = "sha256:e71fb9038bfcd7646ca126c5ef19b17e48d4af9e838b2bcfda7a9f55a6552a32"},
@@ -1118,8 +1118,8 @@ uvloop = [
     {file = "uvloop-0.15.3.tar.gz", hash = "sha256:905f0adb0c09c9f44222ee02f6b96fd88b493478fffb7a345287f9444e926030"},
 ]
 virtualenv = [
-    {file = "virtualenv-20.6.0-py2.py3-none-any.whl", hash = "sha256:e4fc84337dce37ba34ef520bf2d4392b392999dbe47df992870dc23230f6b758"},
-    {file = "virtualenv-20.6.0.tar.gz", hash = "sha256:51df5d8a2fad5d1b13e088ff38a433475768ff61f202356bb9812c454c20ae45"},
+    {file = "virtualenv-20.8.1-py2.py3-none-any.whl", hash = "sha256:10062e34c204b5e4ec5f62e6ef2473f8ba76513a9a617e873f1f8fb4a519d300"},
+    {file = "virtualenv-20.8.1.tar.gz", hash = "sha256:bcc17f0b3a29670dd777d6f0755a4c04f28815395bca279cdcb213b97199a6b8"},
 ]
 wcwidth = [
     {file = "wcwidth-0.2.5-py2.py3-none-any.whl", hash = "sha256:beb4802a9cebb9144e99086eff703a642a13d6a0052920003a230f3294bbe784"},

From 9a2f7eb354ddac917a9a81d04703892c635f5303 Mon Sep 17 00:00:00 2001
From: fabianhe <39628987+fabianhe@users.noreply.github.com>
Date: Tue, 28 Sep 2021 18:38:16 +0200
Subject: [PATCH 19/19] Fix pylint

---
 pyrepositoryminer/commands/commits.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pyrepositoryminer/commands/commits.py b/pyrepositoryminer/commands/commits.py
index b05b033..f1ce68d 100644
--- a/pyrepositoryminer/commands/commits.py
+++ b/pyrepositoryminer/commands/commits.py
@@ -65,7 +65,7 @@ def commits(
 
     branch_names: Iterable[str]
     if branches != Path("-"):
-        with open(branches) as f:
+        with open(branches, encoding="utf-8") as f:
             branch_names = list(f)
     else:
         branch_names = (line for line in stdin)