diff --git a/src/depiction_targeted_preproc/workflow/snakemake_invoke.py b/src/depiction_targeted_preproc/workflow/snakemake_invoke.py index 74f05fa..61edc88 100644 --- a/src/depiction_targeted_preproc/workflow/snakemake_invoke.py +++ b/src/depiction_targeted_preproc/workflow/snakemake_invoke.py @@ -40,8 +40,14 @@ def workflow_dir(self) -> Path: return Path(__file__).parents[1] / "workflow" def _invoke_direct(self, work_dir: Path, result_files: list[Path]) -> None: - from snakemake.api import SnakemakeApi - from snakemake.settings import OutputSettings, StorageSettings, ResourceSettings, DAGSettings, ExecutionSettings + from snakemake.api import ( + SnakemakeApi, + OutputSettings, + StorageSettings, + ResourceSettings, + DAGSettings, + ExecutionSettings, + ) with SnakemakeApi( OutputSettings(