From 8e2146a7d2b558c2cbf9dfe6cda2a441336081da Mon Sep 17 00:00:00 2001 From: Leonardo Schwarz Date: Wed, 13 Nov 2024 17:09:56 +0100 Subject: [PATCH] create the folder --- system_tests/calibration/test_pipeline_calibration_only.py | 1 + 1 file changed, 1 insertion(+) diff --git a/system_tests/calibration/test_pipeline_calibration_only.py b/system_tests/calibration/test_pipeline_calibration_only.py index 650bf67..6ec1813 100644 --- a/system_tests/calibration/test_pipeline_calibration_only.py +++ b/system_tests/calibration/test_pipeline_calibration_only.py @@ -17,6 +17,7 @@ def copy_input_files(target_dir: Path): source_dir = Path(__file__).parents[1] / "inputs" shutil.copy(source_dir / "tonsil.imzML", target_dir / "raw.imzML") shutil.copy(source_dir / "tonsil.ibd", target_dir / "raw.ibd") + (target_dir / "panels").mkdir(parents=True, exist_ok=True) shutil.copy(source_dir / "panel.csv", target_dir / "panels" / "unstandardized_full.csv")