From 98d55133c514e7b044fc602f8d6727b75c0e0297 Mon Sep 17 00:00:00 2001 From: Tavis Anderson Date: Wed, 18 Dec 2024 14:45:42 -0600 Subject: [PATCH] Update README.md --- README.md | 9 ++------- 1 file changed, 2 insertions(+), 7 deletions(-) diff --git a/README.md b/README.md index 995a027..9df7103 100644 --- a/README.md +++ b/README.md @@ -4,14 +4,9 @@ This repository will host scripts and describe how to reproduce the computational analysis in: *Nguyen, et al. **Emergence and interstate spread of highly pathogenic avian influenza A (H5N1) in dairy cattle**. https://www.biorxiv.org/content/10.1101/2024.05.01.591751v1* -This project is in active development. The paper is a preprint and has not been peer reviewed. - -Links and data are being uploaded as provenance is determined. We cannot publicly upload the genetic sequences from GISAID, but alignment files and xml files include accessions that may be downloaded. - -**All other data has been deposited at NCBI Genbank with a listing of accessions provided as soon as they have been generated.** - -If you have specific queries, please submit an issue in the git repo, and we will address it as soon as we are able. Thank you. +The paper is a preprint and has not been peer reviewed. We cannot publicly upload the genetic sequences from GISAID, but alignment files and xml files include accessions that may be downloaded. All other data has been deposited at NCBI Genbank with a listing of accessions provided in the Dataset S4 in the manuscript-supplemental folder. +If you have specific queries, please submit an issue in the git repo, or email Tavis Anderson , and we will address it as soon as we are able. Thank you. ### Project structure ### See the respective README.txt files within the folders for details/instructions.