From d7396fc4ac16e8c0e6686c4988f1c331a41a9dc6 Mon Sep 17 00:00:00 2001 From: Francois Aguet Date: Tue, 28 Nov 2017 22:09:15 -0500 Subject: [PATCH] Minor fix --- R/calculateSignificanceFastQTL.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/R/calculateSignificanceFastQTL.R b/R/calculateSignificanceFastQTL.R index 33a3162..a3dd900 100755 --- a/R/calculateSignificanceFastQTL.R +++ b/R/calculateSignificanceFastQTL.R @@ -9,7 +9,7 @@ suppressMessages(library(argparser)) # parse inputs p <- arg_parser("Annotates FastQTL permutation output and runs qvalue") p <- add_argument(p, "fastqtlOutput", help="") -p <- add_argument(p, "fdr", help="") +p <- add_argument(p, "fdr", type="numeric", help="") p <- add_argument(p, "outfile", help="") p <- add_argument(p, "--lambda", type="numeric", help="", default=NULL) args <- parse_args(p)