Comment on line 1152 of portrait-1.1.pl prevents script from running

[ghost]

Currently, line 1152 contains:

if ($linha =~ /#/) {next;} #ignorando partes comentadas#FRANKCODE

which causes the script to fail. Removing the first '#' fixes it.

[frankMusacchia]

Hi Sbio,

this line makes portrait to not consider fasta sequences which have an header containing a '#' symbol. An entire transcriptome could be completely ignored. Thus I commented it. Pay attention uncommenting this.
Anyway, please insert any question or comment in the forum https://groups.google.com/forum/#!forum/annocript that exists for this purpose. I would be happy if you add there the error you received and this solution, too.

Thanks
Francesco

[ghost]

Thank you for responding. I requested access to the group from [email protected]