From 000a0aa3b6ef0d0ccd4d23ae082930c7fbe45cac Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Mon, 21 Aug 2023 16:53:49 +0200 Subject: [PATCH 01/33] Update fastapi --- poetry.lock | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/poetry.lock b/poetry.lock index bbfd994..662ac19 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2362,7 +2362,7 @@ Flask = "*" importlib_metadata = "*" jinja2 = "*" jsonschema = "*" -pydantic = "*" +pydantic = "<2.0" pygeofilter = "*" pygeoif = "*" pyproj = "*" From 49b962e0a1e447df9bc013fab1c088e22d70b9c5 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Tue, 22 Aug 2023 11:50:06 +0200 Subject: [PATCH 02/33] Fix safety --- poetry.lock | 162 ++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 162 insertions(+) diff --git a/poetry.lock b/poetry.lock index 662ac19..2ac33af 100644 --- a/poetry.lock +++ b/poetry.lock @@ -134,6 +134,24 @@ test = ["beautifulsoup4 (>=4.8.0)", "coverage (>=4.5.4)", "fixtures (>=3.0.0)", toml 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(>=0.29.35)"] + [[package]] name = "mangum" version = "0.14.1" @@ -2775,6 +2911,21 @@ plot = ["matplotlib"] s3 = ["boto3 (>=1.2.4)"] test = ["boto3 (>=1.2.4)", "hypothesis", "packaging", "pytest (>=2.8.2)", "pytest-cov (>=2.2.0)", "shapely"] +[[package]] +name = "readtime" +version = "3.0.0" +description = "Calculates the time some text takes the average human to read, based on Medium's read time forumula" +optional = false +python-versions = "*" +files = [ + {file = "readtime-3.0.0.tar.gz", hash = "sha256:76c5a0d773ad49858c53b42ba3a942f62fbe20cc8c6f07875797ac7dc30963a9"}, +] + +[package.dependencies] +beautifulsoup4 = ">=4.0.1" +markdown2 = ">=2.4.3" +pyquery = ">=1.2" + [[package]] name = "referencing" version = "0.32.0" @@ -3321,6 +3472,17 @@ pyparsing = ">=2.1.6" [package.extras] test = ["hypothesis", "pytest"] +[[package]] +name = "soupsieve" +version = "2.4.1" +description = "A modern CSS selector implementation for Beautiful Soup." +optional = false +python-versions = ">=3.7" +files = [ + {file = "soupsieve-2.4.1-py3-none-any.whl", hash = "sha256:1c1bfee6819544a3447586c889157365a27e10d88cde3ad3da0cf0ddf646feb8"}, + {file = "soupsieve-2.4.1.tar.gz", hash = "sha256:89d12b2d5dfcd2c9e8c22326da9d9aa9cb3dfab0a83a024f05704076ee8d35ea"}, +] + [[package]] name = "sqlalchemy" version = "1.4.50" From db65357767604b654790d92c48b7e70d9207883c Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Fri, 25 Aug 2023 15:53:46 +0200 Subject: [PATCH 03/33] fix(pyproject.toml): Fix backend dependency for pygeofilter --- poetry.lock | 14 ++++++++++++++ 1 file changed, 14 insertions(+) diff --git a/poetry.lock b/poetry.lock index 2ac33af..a92f18a 100644 --- a/poetry.lock +++ b/poetry.lock @@ -61,6 +61,20 @@ files = [ [package.extras] test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] +[[package]] +name = "argcomplete" +version = "3.1.1" +description = "Bash tab completion for argparse" +optional = false +python-versions = ">=3.6" +files = [ + {file = "argcomplete-3.1.1-py3-none-any.whl", hash = "sha256:35fa893a88deea85ea7b20d241100e64516d6af6d7b0ae2bed1d263d26f70948"}, + {file = "argcomplete-3.1.1.tar.gz", hash = "sha256:6c4c563f14f01440aaffa3eae13441c5db2357b5eec639abe7c0b15334627dff"}, +] + +[package.extras] +test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] + [[package]] name = "asttokens" version = "2.4.1" From 36ce5490cb99c4d0c73649e6fc2651e72d344c3e Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Tue, 3 Oct 2023 16:45:20 +0200 Subject: [PATCH 04/33] Fix base url in pygeoapi configuration --- pygeoapi-openapi.yml | 368 ++++++++++++++++++++++++------------------- 1 file changed, 206 insertions(+), 162 deletions(-) diff --git a/pygeoapi-openapi.yml b/pygeoapi-openapi.yml index 5577241..45df001 100644 --- a/pygeoapi-openapi.yml +++ b/pygeoapi-openapi.yml @@ -48,8 +48,7 @@ components: type: string style: form f: - description: - The optional f parameter indicates the output format which the + description: The optional f parameter indicates the output format which the server shall provide as part of the response document. The default format is GeoJSON. explode: false @@ -59,14 +58,13 @@ components: schema: default: json enum: - - json - - html - - jsonld + - json + - html + - jsonld type: string style: form lang: - description: - The optional lang parameter instructs the server return a response + description: The optional lang parameter instructs the server return a response in a certain language, if supported. If the language is not among the available values, the Accept-Language header language will be used if it is supported. If the header is missing, the default server language is used. Note that providers @@ -80,12 +78,11 @@ components: schema: default: en-US enum: - - en-US - - fr-CA + - en-US + - fr-CA type: string offset: - description: - The optional offset parameter indicates the index within the result + description: The optional offset parameter indicates the index within the result set from which the server shall begin presenting results in the response document. The first element has an index of 0 (default). explode: false @@ -98,8 +95,7 @@ components: type: integer style: form properties: - description: - The properties that should be included for each feature. The parameter + description: The properties that should be included for each feature. The parameter value is a comma-separated list of property names. explode: false in: query @@ -129,7 +125,7 @@ components: type: object style: form responses: - "200": + '200': description: successful operation "204": description: no content @@ -137,7 +133,7 @@ components: content: application/json: schema: - $ref: "#/components/schemas/queryables" + $ref: '#/components/schemas/queryables' description: successful queryables operation default: content: @@ -153,7 +149,7 @@ components: type: string language: default: - - en + - en description: the language used for the title and description type: string queryable: @@ -170,17 +166,17 @@ components: format: url type: string required: - - queryable - - type + - queryable + - type type: object queryables: properties: queryables: items: - $ref: "#/components/schemas/queryable" + $ref: '#/components/schemas/queryable' type: array required: - - queryables + - queryables type: object info: contact: @@ -195,9 +191,9 @@ info: title: pygeoapi default instance version: 0.16.dev0 x-keywords: - - geospatial - - data - - api + - geospatial + - data + - api openapi: 3.0.2 paths: /: @@ -205,75 +201,113 @@ paths: description: Landing page operationId: getLandingPage parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Landing page tags: - - server + - server /collections: get: description: Collections operationId: getCollections parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Collections tags: - - server + - server /collections/lakes: get: description: lakes of the world, public domain operationId: describeLakesCollection parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Collection - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes metadata tags: - - lakes + - lakes /collections/lakes/items: get: description: lakes of the world, public domain operationId: getLakesFeatures parameters: - - &id001 - description: - The optional f parameter indicates the output format which the - server shall provide as part of the response document. The default format - is GeoJSON. - explode: false - in: query - name: f - required: false - schema: - default: json + - &id001 + description: The optional f parameter indicates the output format which the + server shall provide as part of the response document. The default format + is GeoJSON. + explode: false + in: query + name: f + required: false + schema: + default: json + enum: + - json + - html + - jsonld + - csv + type: string + style: form + - &id002 + description: The optional lang parameter instructs the server return a response + in a certain language, if supported. If the language is not among the available + values, the Accept-Language header language will be used if it is supported. + If the header is missing, the default server language is used. Note that + providers may only support a single language (or often no language at all), + that can be different from the server language. Language strings can be + written in a complex (e.g. "fr-CA,fr;q=0.9,en-US;q=0.8,en;q=0.7"), simple + (e.g. "de") or locale-like (e.g. "de-CH" or "fr_BE") fashion. + in: query + name: lang + required: false + schema: + default: en-US + enum: + - en-US + - fr-CA + type: string + - $ref: '#/components/parameters/bbox' + - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/limit + - $ref: '#/components/parameters/crs' + - $ref: '#/components/parameters/bbox-crs' + - description: The properties that should be included for each feature. The + parameter value is a comma-separated list of property names. + explode: false + in: query + name: properties + required: false + schema: + items: enum: - - json - - html - - jsonld - - csv + - id + - scalerank + - name + - name_alt + - admin + - featureclass type: string style: form - &id002 @@ -365,13 +399,13 @@ paths: type: string style: form responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Features - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes items tags: @@ -394,13 +428,13 @@ paths: - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Feature - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes item by id tags: @@ -420,39 +454,39 @@ paths: description: lakes of the world, public domain operationId: getLakesQueryables parameters: - - *id001 - - *id002 + - *id001 + - *id002 responses: - "200": - $ref: "#/components/responses/Queryables" - "400": + '200': + $ref: '#/components/responses/Queryables' + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes queryables tags: - - lakes + - lakes /collections/obs: get: description: My cool observations operationId: describeObsCollection parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Collection - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations metadata tags: - - obs + - obs /collections/obs/items: get: description: My cool observations @@ -491,36 +525,48 @@ paths: required: false schema: type: string - style: form - - explode: false - in: query - name: stn_id - required: false - schema: - type: integer - style: form - - explode: false - in: query - name: datetime - required: false - schema: - type: string - style: form - - explode: false - in: query - name: value - required: false - schema: - type: number - style: form + type: array + style: form + - $ref: '#/components/parameters/vendorSpecificParameters' + - $ref: '#/components/parameters/skipGeometry' + - $ref: https://raw.githubusercontent.com/opengeospatial/ogcapi-records/master/core/openapi/parameters/sortby.yaml + - $ref: '#/components/parameters/offset' + - explode: false + in: query + name: id + required: false + schema: + type: string + style: form + - explode: false + in: query + name: stn_id + required: false + schema: + type: integer + style: form + - explode: false + in: query + name: datetime + required: false + schema: + type: string + style: form + - explode: false + in: query + name: value + required: false + schema: + type: number + style: form responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Features - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations items tags: @@ -543,13 +589,13 @@ paths: - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Feature - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations item by id tags: @@ -569,33 +615,33 @@ paths: description: My cool observations operationId: getObsQueryables parameters: - - *id001 - - *id002 + - *id001 + - *id002 responses: - "200": - $ref: "#/components/responses/Queryables" - "400": + '200': + $ref: '#/components/responses/Queryables' + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations queryables tags: - - obs + - obs /conformance: get: description: API conformance definition operationId: getConformanceDeclaration parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: API conformance definition tags: @@ -674,65 +720,63 @@ paths: description: This document operationId: getOpenapi parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" - - description: UI to render the OpenAPI document - explode: false - in: query - name: ui - required: false - schema: - default: swagger - enum: - - swagger - - redoc - type: string - style: form + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' + - description: UI to render the OpenAPI document + explode: false + in: query + name: ui + required: false + schema: + default: swagger + enum: + - swagger + - redoc + type: string + style: form responses: - "200": - $ref: "#/components/responses/200" - "400": + '200': + $ref: '#/components/responses/200' + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter default: - $ref: "#/components/responses/default" + $ref: '#/components/responses/default' summary: This document tags: - - server + - server /processes: get: description: Processes operationId: getProcesses parameters: - - $ref: "#/components/parameters/f" + - $ref: '#/components/parameters/f' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ProcessList.yaml default: - $ref: "#/components/responses/default" + $ref: '#/components/responses/default' summary: Processes tags: - - server + - server /processes/hello-world: get: - description: - An example process that takes a name as input, and echoes it back + description: An example process that takes a name as input, and echoes it back as output. Intended to demonstrate a simple process with a single literal input. operationId: describeHello-worldProcess parameters: - - $ref: "#/components/parameters/f" + - $ref: '#/components/parameters/f' responses: - "200": - $ref: "#/components/responses/200" + '200': + $ref: '#/components/responses/200' default: - $ref: "#/components/responses/default" + $ref: '#/components/responses/default' summary: Get process metadata tags: - - hello-world + - hello-world /processes/hello-world/execution: post: - description: - An example process that takes a name as input, and echoes it back + description: An example process that takes a name as input, and echoes it back as output. Intended to demonstrate a simple process with a single literal input. operationId: executeHello-worldJob @@ -748,19 +792,19 @@ paths: description: Mandatory execute request JSON required: true responses: - "200": - $ref: "#/components/responses/200" - "201": + '200': + $ref: '#/components/responses/200' + '201': $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ExecuteAsync.yaml - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/NotFound.yaml - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ServerError.yaml default: - $ref: "#/components/responses/default" + $ref: '#/components/responses/default' summary: Process Hello World execution tags: - - hello-world + - hello-world servers: - description: pygeoapi provides an API to geospatial data url: http://localhost:5000/geoapi From 1201358260c4a1e5f387c8579eb8aa6e6f725f10 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Tue, 3 Oct 2023 20:14:24 +0200 Subject: [PATCH 05/33] Update to pydantic v2 --- poetry.lock | 170 +------------------- pygeoapi-openapi.yml | 368 +++++++++++++++++++------------------------ 2 files changed, 166 insertions(+), 372 deletions(-) diff --git a/poetry.lock b/poetry.lock index a92f18a..d5047af 100644 --- a/poetry.lock +++ b/poetry.lock @@ -63,13 +63,13 @@ test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] [[package]] name = "argcomplete" -version = "3.1.1" +version = "3.1.2" description = "Bash tab completion for argparse" optional = false python-versions = ">=3.6" files = [ - 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The default format is GeoJSON. explode: false @@ -58,13 +59,14 @@ components: schema: default: json enum: - - json - - html - - jsonld + - json + - html + - jsonld type: string style: form lang: - description: The optional lang parameter instructs the server return a response + description: + The optional lang parameter instructs the server return a response in a certain language, if supported. If the language is not among the available values, the Accept-Language header language will be used if it is supported. If the header is missing, the default server language is used. Note that providers @@ -78,11 +80,12 @@ components: schema: default: en-US enum: - - en-US - - fr-CA + - en-US + - fr-CA type: string offset: - description: The optional offset parameter indicates the index within the result + description: + The optional offset parameter indicates the index within the result set from which the server shall begin presenting results in the response document. The first element has an index of 0 (default). explode: false @@ -95,7 +98,8 @@ components: type: integer style: form properties: - description: The properties that should be included for each feature. The parameter + description: + The properties that should be included for each feature. The parameter value is a comma-separated list of property names. explode: false in: query @@ -125,7 +129,7 @@ components: type: object style: form responses: - '200': + "200": description: successful operation "204": description: no content @@ -133,7 +137,7 @@ components: content: application/json: schema: - $ref: '#/components/schemas/queryables' + $ref: "#/components/schemas/queryables" description: successful queryables operation default: content: @@ -149,7 +153,7 @@ components: type: string language: default: - - en + - en description: the language used for the title and description type: string queryable: @@ -166,17 +170,17 @@ components: format: url type: string required: - - queryable - - type + - queryable + - type type: object queryables: properties: queryables: items: - $ref: '#/components/schemas/queryable' + $ref: "#/components/schemas/queryable" type: array required: - - queryables + - queryables type: object info: contact: @@ -191,9 +195,9 @@ info: title: pygeoapi default instance version: 0.16.dev0 x-keywords: - - geospatial - - data - - api + - geospatial + - data + - api openapi: 3.0.2 paths: /: @@ -201,113 +205,75 @@ paths: description: Landing page operationId: getLandingPage parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Landing page tags: - - server + - server /collections: get: description: Collections operationId: getCollections parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Collections tags: - - server + - server /collections/lakes: get: description: lakes of the world, public domain operationId: describeLakesCollection parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Collection - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes metadata tags: - - lakes + - lakes /collections/lakes/items: get: description: lakes of the world, public domain operationId: getLakesFeatures parameters: - - &id001 - description: The optional f parameter indicates the output format which the - server shall provide as part of the response document. The default format - is GeoJSON. - explode: false - in: query - name: f - required: false - schema: - default: json - enum: - - json - - html - - jsonld - - csv - type: string - style: form - - &id002 - description: The optional lang parameter instructs the server return a response - in a certain language, if supported. If the language is not among the available - values, the Accept-Language header language will be used if it is supported. - If the header is missing, the default server language is used. Note that - providers may only support a single language (or often no language at all), - that can be different from the server language. Language strings can be - written in a complex (e.g. "fr-CA,fr;q=0.9,en-US;q=0.8,en;q=0.7"), simple - (e.g. "de") or locale-like (e.g. "de-CH" or "fr_BE") fashion. - in: query - name: lang - required: false - schema: - default: en-US - enum: - - en-US - - fr-CA - type: string - - $ref: '#/components/parameters/bbox' - - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/limit - - $ref: '#/components/parameters/crs' - - $ref: '#/components/parameters/bbox-crs' - - description: The properties that should be included for each feature. The - parameter value is a comma-separated list of property names. - explode: false - in: query - name: properties - required: false - schema: - items: + - &id001 + description: + The optional f parameter indicates the output format which the + server shall provide as part of the response document. The default format + is GeoJSON. + explode: false + in: query + name: f + required: false + schema: + default: json enum: - - id - - scalerank - - name - - name_alt - - admin - - featureclass + - json + - html + - jsonld + - csv type: string style: form - &id002 @@ -399,13 +365,13 @@ paths: type: string style: form responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Features - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes items tags: @@ -428,13 +394,13 @@ paths: - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Feature - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes item by id tags: @@ -454,39 +420,39 @@ paths: description: lakes of the world, public domain operationId: getLakesQueryables parameters: - - *id001 - - *id002 + - *id001 + - *id002 responses: - '200': - $ref: '#/components/responses/Queryables' - '400': + "200": + $ref: "#/components/responses/Queryables" + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes queryables tags: - - lakes + - lakes /collections/obs: get: description: My cool observations operationId: describeObsCollection parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Collection - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations metadata tags: - - obs + - obs /collections/obs/items: get: description: My cool observations @@ -525,48 +491,36 @@ paths: required: false schema: type: string - type: array - style: form - - $ref: '#/components/parameters/vendorSpecificParameters' - - $ref: '#/components/parameters/skipGeometry' - - $ref: https://raw.githubusercontent.com/opengeospatial/ogcapi-records/master/core/openapi/parameters/sortby.yaml - - $ref: '#/components/parameters/offset' - - explode: false - in: query - name: id - required: false - schema: - type: string - style: form - - explode: false - in: query - name: stn_id - required: false - schema: - type: integer - style: form - - explode: false - in: query - name: datetime - required: false - schema: - type: string - style: form - - explode: false - in: query - name: value - required: false - schema: - type: number - style: form + style: form + - explode: false + in: query + name: stn_id + required: false + schema: + type: integer + style: form + - explode: false + in: query + name: datetime + required: false + schema: + type: string + style: form + - explode: false + in: query + name: value + required: false + schema: + type: number + style: form responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Features - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations items tags: @@ -589,13 +543,13 @@ paths: - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Feature - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations item by id tags: @@ -615,33 +569,33 @@ paths: description: My cool observations operationId: getObsQueryables parameters: - - *id001 - - *id002 + - *id001 + - *id002 responses: - '200': - $ref: '#/components/responses/Queryables' - '400': + "200": + $ref: "#/components/responses/Queryables" + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations queryables tags: - - obs + - obs /conformance: get: description: API conformance definition operationId: getConformanceDeclaration parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: API conformance definition tags: @@ -720,63 +674,65 @@ paths: description: This document operationId: getOpenapi parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' - - description: UI to render the OpenAPI document - explode: false - in: query - name: ui - required: false - schema: - default: swagger - enum: - - swagger - - redoc - type: string - style: form + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" + - description: UI to render the OpenAPI document + explode: false + in: query + name: ui + required: false + schema: + default: swagger + enum: + - swagger + - redoc + type: string + style: form responses: - '200': - $ref: '#/components/responses/200' - '400': + "200": + $ref: "#/components/responses/200" + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter default: - $ref: '#/components/responses/default' + $ref: "#/components/responses/default" summary: This document tags: - - server + - server /processes: get: description: Processes operationId: getProcesses parameters: - - $ref: '#/components/parameters/f' + - $ref: "#/components/parameters/f" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ProcessList.yaml default: - $ref: '#/components/responses/default' + $ref: "#/components/responses/default" summary: Processes tags: - - server + - server /processes/hello-world: get: - description: An example process that takes a name as input, and echoes it back + description: + An example process that takes a name as input, and echoes it back as output. Intended to demonstrate a simple process with a single literal input. operationId: describeHello-worldProcess parameters: - - $ref: '#/components/parameters/f' + - $ref: "#/components/parameters/f" responses: - '200': - $ref: '#/components/responses/200' + "200": + $ref: "#/components/responses/200" default: - $ref: '#/components/responses/default' + $ref: "#/components/responses/default" summary: Get process metadata tags: - - hello-world + - hello-world /processes/hello-world/execution: post: - description: An example process that takes a name as input, and echoes it back + description: + An example process that takes a name as input, and echoes it back as output. Intended to demonstrate a simple process with a single literal input. operationId: executeHello-worldJob @@ -792,19 +748,19 @@ paths: description: Mandatory execute request JSON required: true responses: - '200': - $ref: '#/components/responses/200' - '201': + "200": + $ref: "#/components/responses/200" + "201": $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ExecuteAsync.yaml - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/NotFound.yaml - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ServerError.yaml default: - $ref: '#/components/responses/default' + $ref: "#/components/responses/default" summary: Process Hello World execution tags: - - hello-world + - hello-world servers: - description: pygeoapi provides an API to geospatial data url: http://localhost:5000/geoapi From 88dfbeb2b7d5e1afdc7a98615a5aae14b1a3e0ac Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Tue, 26 Dec 2023 00:50:51 +0100 Subject: [PATCH 06/33] Update dependencies --- poetry.lock | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/poetry.lock b/poetry.lock index d5047af..7839b4d 100644 --- a/poetry.lock +++ b/poetry.lock @@ -63,13 +63,13 @@ test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] [[package]] name = "argcomplete" -version = "3.1.2" +version = "3.1.6" description = "Bash tab completion for argparse" optional = false -python-versions = ">=3.6" +python-versions = ">=3.8" files = [ - {file = "argcomplete-3.1.2-py3-none-any.whl", hash = "sha256:d97c036d12a752d1079f190bc1521c545b941fda89ad85d15afa909b4d1b9a99"}, - {file = "argcomplete-3.1.2.tar.gz", hash = "sha256:d5d1e5efd41435260b8f85673b74ea2e883affcbec9f4230c582689e8e78251b"}, + {file = "argcomplete-3.1.6-py3-none-any.whl", hash = "sha256:71f4683bc9e6b0be85f2b2c1224c47680f210903e23512cfebfe5a41edfd883a"}, + {file = "argcomplete-3.1.6.tar.gz", hash = "sha256:3b1f07d133332547a53c79437527c00be48cca3807b1d4ca5cab1b26313386a6"}, ] [package.extras] From 57218db0d1e317385a7969e6468ba78d7b068ced Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Wed, 27 Dec 2023 11:06:59 +0100 Subject: [PATCH 07/33] Add support for a generic oidc provider with jwks endpoint --- .env | 11 +++- app/auth/__init__.py | 0 app/auth/auth_interface.py | 23 +++++++ app/auth/auth_jwks.py | 87 +++++++++++++++++++++++++++ app/auth/exceptions.py | 10 ++++ app/auth/oidc.py | 50 ++++++++++++++++ app/config/app.py | 9 +++ app/config/auth.py | 30 ++++++---- app/main.py | 25 ++++++-- app/middleware/oidc.py | 120 +++++++++++++++++++++++++++++++++++++ poetry.lock | 41 ++++++++----- pyproject.toml | 2 + 12 files changed, 376 insertions(+), 32 deletions(-) create mode 100644 app/auth/__init__.py create mode 100644 app/auth/auth_interface.py create mode 100644 app/auth/auth_jwks.py create mode 100644 app/auth/exceptions.py create mode 100644 app/auth/oidc.py create mode 100644 app/middleware/oidc.py diff --git a/.env b/.env index 355ee4e..e2f343f 100644 --- a/.env +++ b/.env @@ -39,11 +39,15 @@ DEV_OPA_URL=http://localhost:8383 # api-keys DEV_API_KEY_ENABLED=false DEV_PYGEOAPI_KEY_GLOBAL=pygeoapi -# oidc +# oidc-full DEV_APP_URI=http://localhost:5000 DEV_OIDC_WELL_KNOWN_ENDPOINT=http://localhost:8282/realms/pygeoapi/.well-known/openid-configuration DEV_OIDC_CLIENT_ID=pygeoapi-client DEV_OIDC_CLIENT_SECRET=2yholx8r3mqyUJaOoJiZhcqvQDQwmgyD +# oidc-jwks-only +DEV_JWKS_ENABLED=true +# DEV_OIDC_JWKS_ENDPOINT=https://ssopre.comune.roma.it/ssoservice/oauth2/realms/root/realms/public/connect/jwk_uri +DEV_OIDC_JWKS_ENDPOINT=https://uat.interop.pagopa.it/.well-known/jwks.json # pygeoapi DEV_PYGEOAPI_BASEURL=http://localhost:5000 DEV_PYGEOAPI_CONFIG=pygeoapi-config.yml @@ -68,11 +72,14 @@ PROD_OPA_URL=http://localhost:8383 # api-keys PROD_API_KEY_ENABLED=true PROD_PYGEOAPI_KEY_GLOBAL=pygeoapi -# oidc +# oidc-full PROD_APP_URI=http://localhost:5000 PROD_OIDC_WELL_KNOWN_ENDPOINT=http://localhost:8282/realms/pygeoapi/.well-known/openid-configuration PROD_OIDC_CLIENT_ID=pygeoapi-client PROD_OIDC_CLIENT_SECRET=2yholx8r3mqyUJaOoJiZhcqvQDQwmgyD +# oidc-jwks-only +PROD_JWKS_ENABLED=false +PROD_OIDC_JWKS_ENDPOINT= # pygeoapi PROD_PYGEOAPI_BASEURL=http://localhost:5000 PROD_PYGEOAPI_CONFIG=pygeoapi-config.yml diff --git a/app/auth/__init__.py b/app/auth/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/app/auth/auth_interface.py b/app/auth/auth_interface.py new file mode 100644 index 0000000..6d8b805 --- /dev/null +++ b/app/auth/auth_interface.py @@ -0,0 +1,23 @@ +from abc import ABC +from abc import abstractmethod +from typing import Dict +from typing import Union + +from starlette.requests import Request +from starlette.responses import RedirectResponse + + +class AuthInterface(ABC): + """The interface provides necessary methods for the OPAMiddleware + authentication flow. This allows to easily integrate various auth methods. + """ + + @abstractmethod + async def authenticate( + self, request: Request + ) -> Union[RedirectResponse, Dict]: + """The method returns a dictionary containing the valid and authorized + users information or a redirect since some flows require calling a + identity broker beforehand. + """ + pass \ No newline at end of file diff --git a/app/auth/auth_jwks.py b/app/auth/auth_jwks.py new file mode 100644 index 0000000..46fa895 --- /dev/null +++ b/app/auth/auth_jwks.py @@ -0,0 +1,87 @@ +import httpx +import typing + +from authlib.jose import JsonWebToken, JsonWebKey, KeySet, JWTClaims, errors +from cachetools import cached, TTLCache +from dataclasses import dataclass +from dataclasses import field +from fastapi import HTTPException +from starlette.requests import Request +from starlette.responses import RedirectResponse + +from app.auth.auth_interface import AuthInterface +from app.auth.exceptions import OIDCException +from app.config.logging import create_logger + + +logger = create_logger("app.auth.auth_jwks") + + +@dataclass +class JWKSConfig: + jwks_uri: str = field(default="") + + +class JWKSAuthentication(AuthInterface): + + def __init__(self, config: JWKSConfig) -> None: + self.config = config + + # @cached(TTLCache(maxsize=1, ttl=3600)) + async def get_jwks(self) -> KeySet: + """ + Get cached or new JWKS. + """ + url = self.config.jwks_uri + # logger.info(f"Fetching JWKS from {url}") + async with httpx.AsyncClient() as client: + response = await client.get(url) + return JsonWebKey.import_key_set(response.json()) + + async def decode_token( + self, + token: str, + ) -> JWTClaims: + """ + Validate & decode JWT. + """ + try: + jwks = await self.get_jwks() + claims = JsonWebToken(["RS256"]).decode( + s=token, + key=jwks, + # claim_options={ + # # Example of validating audience to match expected value + # # "aud": {"essential": True, "values": [APP_CLIENT_ID]} + # } + ) + if "client_id" in claims: + # Insert Cognito's `client_id` into `aud` claim if `aud` claim is unset + claims.setdefault("aud", claims["client_id"]) + claims.validate() + except errors.ExpiredTokenError: + logger.error("Unable to validate token") + raise HTTPException(status_code=401, detail="Expired auth token") + except errors.JoseError: + logger.error("Unable to decode token") + raise HTTPException(status_code=403, detail="Bad auth token") + + return claims + + async def authenticate( + self, + request: Request, + accepted_methods: typing.Optional[typing.List[str]] = ["access_token"], + ) -> typing.Union[RedirectResponse, typing.Dict]: + bearer = request.headers.get("Authorization") + if not bearer: + logger.exception("Unable to get a token") + raise OIDCException("Auth token not found") + access_token = bearer.replace("Bearer ", "") + try: + claims = await self.decode_token(access_token) + if not claims: + pass + return claims + except: + raise OIDCException("Authentication error") diff --git a/app/auth/exceptions.py b/app/auth/exceptions.py new file mode 100644 index 0000000..8c79779 --- /dev/null +++ b/app/auth/exceptions.py @@ -0,0 +1,10 @@ +class AuthenticationException(Exception): + """This is being raised for exceptions within the auth flow.""" + + pass + + +class OIDCException(AuthenticationException): + """OIDC authentication flow exception.""" + + pass diff --git a/app/auth/oidc.py b/app/auth/oidc.py new file mode 100644 index 0000000..3db1bb6 --- /dev/null +++ b/app/auth/oidc.py @@ -0,0 +1,50 @@ +import re +from abc import ABC +from abc import abstractmethod +from typing import List +from typing import Optional + +from starlette.requests import Request + +from app.auth.auth_interface import AuthInterface + + +class Injectable(ABC): + def __init__( + self, key: str, skip_endpoints: Optional[List[str]] = [] + ) -> None: + self.key = key + self.skip_endpoints = [re.compile(skip) for skip in skip_endpoints] + + @abstractmethod + async def extract(self, request: Request) -> List: + pass + + +class OIDCProvider: + def __init__( + self, + authentication: [AuthInterface, List[AuthInterface]], + injectables: Optional[List[Injectable]] = None, + accepted_methods: Optional[List[str]] = ["id_token", "access_token"], + ) -> None: + """ + Configuration container for the OIDCMiddleware. + + PARAMETERS + ---------- + authentication: [AuthInterface, List[AuthInterface]] + Authentication Implementations to be used for the + request authentication. + injectables: List[Injectable], default=None + List of injectables to be used to add information to the + request payload. + accepted_methods: List[str], default=["id_token", "access_token"] + List of accepted authentication methods. + """ + + if not isinstance(authentication, list): + authentication = [authentication] + self.authentication = authentication + self.injectables = injectables + self.accepted_methods = accepted_methods diff --git a/app/config/app.py b/app/config/app.py index 7c5b6c9..5cb4e68 100644 --- a/app/config/app.py +++ b/app/config/app.py @@ -67,6 +67,12 @@ class DevConfig(GlobalConfig): API_KEY_ENABLED: Optional[bool] = pydantic.Field( None, env="DEV_API_KEY_ENABLED" ) # type: ignore + JWKS_ENABLED: Optional[bool] = pydantic.Field( + None, env="DEV_JWKS_ENABLED" + ) # type: ignore + OIDC_JWKS_ENDPOINT: Optional[str] = pydantic.Field( + None, env="DEV_OIDC_JWKS_ENDPOINT" + ) # type: ignore PYGEOAPI_KEY_GLOBAL: Optional[str] = pydantic.Field( None, env="DEV_PYGEOAPI_KEY_GLOBAL" ) # type: ignore @@ -131,6 +137,9 @@ class ProdConfig(GlobalConfig): API_KEY_ENABLED: Optional[bool] = pydantic.Field( None, env="PROD_API_KEY_ENABLED" ) # type: ignore + OIDC_JWKS_ENDPOINT: Optional[str] = pydantic.Field( + None, env="PROD_OIDC_JWKS_ENDPOINT" + ) # type: ignore PYGEOAPI_KEY_GLOBAL: Optional[str] = pydantic.Field( None, env="PROD_PYGEOAPI_KEY_GLOBAL" ) # type: ignore diff --git a/app/config/auth.py b/app/config/auth.py index 39da1e6..cebcd98 100644 --- a/app/config/auth.py +++ b/app/config/auth.py @@ -1,5 +1,8 @@ """Authn and Authz module.""" from app.config.app import configuration as cfg +from app.auth.auth_jwks import JWKSConfig +from app.auth.auth_jwks import JWKSAuthentication +from app.auth.oidc import OIDCProvider from fastapi_opa import OPAConfig from fastapi_opa.auth import OIDCAuthentication from fastapi_opa.auth import OIDCConfig @@ -8,14 +11,19 @@ # The hostname of your Open Policy Agent instance opa_host = cfg.OPA_URL # In this example we use OIDC authentication flow (using Keycloak) -oidc_config = OIDCConfig( - well_known_endpoint=cfg.OIDC_WELL_KNOWN_ENDPOINT, - # well known endpoint - app_uri=cfg.APP_URI, # host where this app is running - # client id of your app configured in the identity provider - client_id=cfg.OIDC_CLIENT_ID, - # the client secret retrieved from your identity provider - client_secret=cfg.OIDC_CLIENT_SECRET, -) -oidc_auth = OIDCAuthentication(oidc_config) -opa_config = OPAConfig(authentication=oidc_auth, opa_host=opa_host) +if cfg.OPA_ENABLED: + oidc_config = OIDCConfig( + well_known_endpoint=cfg.OIDC_WELL_KNOWN_ENDPOINT, + # well known endpoint + app_uri=cfg.APP_URI, # host where this app is running + # client id of your app configured in the identity provider + client_id=cfg.OIDC_CLIENT_ID, + # the client secret retrieved from your identity provider + client_secret=cfg.OIDC_CLIENT_SECRET, + ) + oidc_auth = OIDCAuthentication(oidc_config) + auth_config = OPAConfig(authentication=oidc_auth, opa_host=opa_host) +elif cfg.JWKS_ENABLED: + jwks_config = JWKSConfig(jwks_uri=cfg.OIDC_JWKS_ENDPOINT) + jwks_auth = JWKSAuthentication(jwks_config) + auth_config = OIDCProvider(authentication=jwks_auth) diff --git a/app/main.py b/app/main.py index 3aa7687..be00610 100644 --- a/app/main.py +++ b/app/main.py @@ -9,6 +9,7 @@ from app.config.app import configuration as cfg from app.config.logging import create_logger from app.middleware.pygeoapi import OpenapiSecurityMiddleware +from app.middleware.oidc import OIDCMiddleware from app.utils.app_exceptions import app_exception_handler from app.utils.app_exceptions import AppExceptionError from app.utils.pygeoapi_exceptions import PygeoapiEnvError @@ -115,17 +116,33 @@ async def custom_app_exception_handler(request, e): # Add OPAMiddleware to the pygeoapi app security_scheme = None if cfg.OPA_ENABLED: - if cfg.API_KEY_ENABLED: - raise ValueError("OPA_ENABLED and API_KEY_ENABLED are mutually exclusive") - from app.config.auth import opa_config + if cfg.API_KEY_ENABLED or cfg.JWKS_ENABLED: + raise ValueError( + "OPA_ENABLED, JWKS_ENABLED and API_KEY_ENABLED are mutually exclusive" + ) + from app.config.auth import auth_config - PYGEOAPI_APP.add_middleware(OPAMiddleware, config=opa_config) + PYGEOAPI_APP.add_middleware(OPAMiddleware, config=auth_config) security_scheme = SecurityScheme( type="openIdConnect", name="OIDC", openIdConnectUrl=cfg.OIDC_WELL_KNOWN_ENDPOINT, ) + elif cfg.JWKS_ENABLED: + if cfg.API_KEY_ENABLED or cfg.OPA_ENABLED: + raise ValueError( + "OPA_ENABLED, JWKS_ENABLED and API_KEY_ENABLED are mutually exclusive" + ) + from app.config.auth import auth_config + + PYGEOAPI_APP.add_middleware(OIDCMiddleware, config=auth_config) + + security_scheme = SecurityScheme( + type="openIdConnect", + name="OIDC", + openIdConnectUrl=cfg.OIDC_JWKS_ENDPOINT, + ) elif cfg.API_KEY_ENABLED: if cfg.OPA_ENABLED: raise ValueError("OPA_ENABLED and API_KEY_ENABLED are mutually exclusive") diff --git a/app/middleware/oidc.py b/app/middleware/oidc.py new file mode 100644 index 0000000..ae67d9a --- /dev/null +++ b/app/middleware/oidc.py @@ -0,0 +1,120 @@ +import asyncio +import logging +import re +from typing import List +from typing import Optional + +from fastapi.responses import JSONResponse +from starlette.requests import Request +from starlette.responses import RedirectResponse +from starlette.types import ASGIApp +from starlette.types import Receive +from starlette.types import Scope +from starlette.types import Send + +from app.auth.exceptions import AuthenticationException +from app.auth.oidc import OIDCProvider +from app.config.logging import create_logger + +try: + Pattern = re.Pattern +except AttributeError: + # Python3.6 does not contain re.Pattern + Pattern = None + + +logger = create_logger("app.middleware.oidc") + + +def should_skip_endpoint(endpoint: str, skip_endpoints: List[Pattern]) -> bool: + for skip in skip_endpoints: + if skip.match(endpoint): + return True + return False + + +class OwnReceive: + """ + This class is required in order to access the request + body multiple times. + """ + + def __init__(self, receive: Receive): + self.receive = receive + self.data = None + + async def __call__(self): + if self.data is None: + self.data = await self.receive() + + return self.data + + +class OIDCMiddleware: + def __init__( + self, + app: ASGIApp, + config: OIDCProvider, + skip_endpoints: Optional[List[str]] = [ + "/openapi", + "/openapi.json", + "/docs", + "/redoc", + ], + ) -> None: + self.config = config + self.app = app + self.skip_endpoints = [re.compile(skip) for skip in skip_endpoints] + + async def __call__( + self, scope: Scope, receive: Receive, send: Send + ) -> None: + if scope["type"] == "lifespan": + return await self.app(scope, receive, send) + + # Small hack to ensure that later we can still receive the body + # own_receive = OwnReceive(receive) + request = Request(scope, receive, send) + + if request.method == "OPTIONS": + return await self.app(scope, receive, send) + + # allow openapi endpoints without authentication + if should_skip_endpoint(request.url.path, self.skip_endpoints): + return await self.app(scope, receive, send) + + # authenticate user or get redirect to identity provider + successful = False + for auth in self.config.authentication: + try: + user_info_or_auth_redirect = auth.authenticate( + request, self.config.accepted_methods + ) + if asyncio.iscoroutine(user_info_or_auth_redirect): + user_info_or_auth_redirect = ( + await user_info_or_auth_redirect + ) + if isinstance(user_info_or_auth_redirect, dict): + successful = True + break + except AuthenticationException: + logger.error("AuthenticationException raised on login") + + # Some authentication flows require a prior redirect to id provider + if isinstance(user_info_or_auth_redirect, RedirectResponse): + return await user_info_or_auth_redirect.__call__( + scope, receive, send + ) + if not successful: + return await self.get_unauthorized_response(scope, receive, send) + + await self.app(scope, receive, send) + + @staticmethod + async def get_unauthorized_response( + scope: Scope, receive: Receive, send: Send + ) -> None: + response = JSONResponse( + status_code=401, content={"message": "Unauthenticated"} + ) + return await response(scope, receive, send) \ No newline at end of file diff --git a/poetry.lock b/poetry.lock index 7839b4d..5a7cff0 100644 --- a/poetry.lock +++ b/poetry.lock @@ -61,20 +61,6 @@ files = [ [package.extras] test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] -[[package]] -name = "argcomplete" -version = "3.1.6" -description = "Bash tab completion for argparse" -optional = false -python-versions = ">=3.8" -files = [ - {file = "argcomplete-3.1.6-py3-none-any.whl", hash = "sha256:71f4683bc9e6b0be85f2b2c1224c47680f210903e23512cfebfe5a41edfd883a"}, - {file = "argcomplete-3.1.6.tar.gz", hash = "sha256:3b1f07d133332547a53c79437527c00be48cca3807b1d4ca5cab1b26313386a6"}, -] - -[package.extras] -test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] - [[package]] name = "asttokens" version = "2.4.1" @@ -111,6 +97,20 @@ docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib- tests = ["attrs[tests-no-zope]", "zope-interface"] tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] +[[package]] +name = "authlib" +version = "1.3.0" +description = "The ultimate Python library in building OAuth and OpenID Connect servers and clients." +optional = false +python-versions = ">=3.8" +files = [ + {file = "Authlib-1.3.0-py2.py3-none-any.whl", hash = "sha256:9637e4de1fb498310a56900b3e2043a206b03cb11c05422014b0302cbc814be3"}, + {file = "Authlib-1.3.0.tar.gz", hash = "sha256:959ea62a5b7b5123c5059758296122b57cd2585ae2ed1c0622c21b371ffdae06"}, +] + +[package.dependencies] +cryptography = "*" + [[package]] name = "babel" version = "2.14.0" @@ -183,6 +183,17 @@ d = ["aiohttp (>=3.7.4)"] jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"] uvloop = ["uvloop (>=0.15.2)"] +[[package]] +name = "cachetools" +version = "5.3.2" +description = "Extensible memoizing collections and decorators" +optional = false +python-versions = ">=3.7" +files = [ + {file = "cachetools-5.3.2-py3-none-any.whl", hash = "sha256:861f35a13a451f94e301ce2bec7cac63e881232ccce7ed67fab9b5df4d3beaa1"}, + {file = "cachetools-5.3.2.tar.gz", hash = "sha256:086ee420196f7b2ab9ca2db2520aca326318b68fe5ba8bc4d49cca91add450f2"}, +] + [[package]] name = "certifi" version = "2023.11.17" @@ -4106,4 +4117,4 @@ testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "p [metadata] lock-version = "2.0" python-versions = ">=3.9,<4.0" -content-hash = "4b000536b045ad13a066bc328167758e5241060e44d6714109b8603723d0f8ba" +content-hash = "7e6e315ea3cd4e996f91a3f6312b5c78e4756ed0f82a7a186a03ef299dd467f0" diff --git a/pyproject.toml b/pyproject.toml index 4e0dd40..6429beb 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -40,6 +40,8 @@ psycopg2 = "^2.9.7" openapi-pydantic = "^0.3.2" pygeofilter = {extras = ["backend-sqlalchemy"], version = "^0.2.1"} pydantic-settings = "^2.1.0" +authlib = "^1.3.0" +cachetools = "^5.3.2" [tool.poetry.scripts] fastgeoapi = "cli:app" From dbfc796ccb549b62cec52af6cc5236598c03533b Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Wed, 27 Dec 2023 11:17:59 +0100 Subject: [PATCH 08/33] Fix imports sort --- app/auth/auth_interface.py | 6 ++---- app/auth/auth_jwks.py | 19 +++++++++++-------- app/auth/oidc.py | 7 ++----- app/config/auth.py | 4 ++-- app/main.py | 2 +- app/middleware/oidc.py | 25 ++++++++----------------- 6 files changed, 26 insertions(+), 37 deletions(-) diff --git a/app/auth/auth_interface.py b/app/auth/auth_interface.py index 6d8b805..4a33a2e 100644 --- a/app/auth/auth_interface.py +++ b/app/auth/auth_interface.py @@ -13,11 +13,9 @@ class AuthInterface(ABC): """ @abstractmethod - async def authenticate( - self, request: Request - ) -> Union[RedirectResponse, Dict]: + async def authenticate(self, request: Request) -> Union[RedirectResponse, Dict]: """The method returns a dictionary containing the valid and authorized users information or a redirect since some flows require calling a identity broker beforehand. """ - pass \ No newline at end of file + pass diff --git a/app/auth/auth_jwks.py b/app/auth/auth_jwks.py index 46fa895..b62aecf 100644 --- a/app/auth/auth_jwks.py +++ b/app/auth/auth_jwks.py @@ -1,17 +1,21 @@ -import httpx import typing - -from authlib.jose import JsonWebToken, JsonWebKey, KeySet, JWTClaims, errors -from cachetools import cached, TTLCache from dataclasses import dataclass from dataclasses import field -from fastapi import HTTPException -from starlette.requests import Request -from starlette.responses import RedirectResponse +import httpx from app.auth.auth_interface import AuthInterface from app.auth.exceptions import OIDCException from app.config.logging import create_logger +from authlib.jose import errors +from authlib.jose import JsonWebKey +from authlib.jose import JsonWebToken +from authlib.jose import JWTClaims +from authlib.jose import KeySet +from cachetools import cached +from cachetools import TTLCache +from fastapi import HTTPException +from starlette.requests import Request +from starlette.responses import RedirectResponse logger = create_logger("app.auth.auth_jwks") @@ -23,7 +27,6 @@ class JWKSConfig: class JWKSAuthentication(AuthInterface): - def __init__(self, config: JWKSConfig) -> None: self.config = config diff --git a/app/auth/oidc.py b/app/auth/oidc.py index 3db1bb6..942eadf 100644 --- a/app/auth/oidc.py +++ b/app/auth/oidc.py @@ -4,15 +4,12 @@ from typing import List from typing import Optional -from starlette.requests import Request - from app.auth.auth_interface import AuthInterface +from starlette.requests import Request class Injectable(ABC): - def __init__( - self, key: str, skip_endpoints: Optional[List[str]] = [] - ) -> None: + def __init__(self, key: str, skip_endpoints: Optional[List[str]] = []) -> None: self.key = key self.skip_endpoints = [re.compile(skip) for skip in skip_endpoints] diff --git a/app/config/auth.py b/app/config/auth.py index cebcd98..02221ca 100644 --- a/app/config/auth.py +++ b/app/config/auth.py @@ -1,8 +1,8 @@ """Authn and Authz module.""" -from app.config.app import configuration as cfg -from app.auth.auth_jwks import JWKSConfig from app.auth.auth_jwks import JWKSAuthentication +from app.auth.auth_jwks import JWKSConfig from app.auth.oidc import OIDCProvider +from app.config.app import configuration as cfg from fastapi_opa import OPAConfig from fastapi_opa.auth import OIDCAuthentication from fastapi_opa.auth import OIDCConfig diff --git a/app/main.py b/app/main.py index be00610..a3ea414 100644 --- a/app/main.py +++ b/app/main.py @@ -8,8 +8,8 @@ import uvicorn from app.config.app import configuration as cfg from app.config.logging import create_logger -from app.middleware.pygeoapi import OpenapiSecurityMiddleware from app.middleware.oidc import OIDCMiddleware +from app.middleware.pygeoapi import OpenapiSecurityMiddleware from app.utils.app_exceptions import app_exception_handler from app.utils.app_exceptions import AppExceptionError from app.utils.pygeoapi_exceptions import PygeoapiEnvError diff --git a/app/middleware/oidc.py b/app/middleware/oidc.py index ae67d9a..65b818b 100644 --- a/app/middleware/oidc.py +++ b/app/middleware/oidc.py @@ -4,6 +4,9 @@ from typing import List from typing import Optional +from app.auth.exceptions import AuthenticationException +from app.auth.oidc import OIDCProvider +from app.config.logging import create_logger from fastapi.responses import JSONResponse from starlette.requests import Request from starlette.responses import RedirectResponse @@ -12,10 +15,6 @@ from starlette.types import Scope from starlette.types import Send -from app.auth.exceptions import AuthenticationException -from app.auth.oidc import OIDCProvider -from app.config.logging import create_logger - try: Pattern = re.Pattern except AttributeError: @@ -66,9 +65,7 @@ def __init__( self.app = app self.skip_endpoints = [re.compile(skip) for skip in skip_endpoints] - async def __call__( - self, scope: Scope, receive: Receive, send: Send - ) -> None: + async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: if scope["type"] == "lifespan": return await self.app(scope, receive, send) @@ -91,9 +88,7 @@ async def __call__( request, self.config.accepted_methods ) if asyncio.iscoroutine(user_info_or_auth_redirect): - user_info_or_auth_redirect = ( - await user_info_or_auth_redirect - ) + user_info_or_auth_redirect = await user_info_or_auth_redirect if isinstance(user_info_or_auth_redirect, dict): successful = True break @@ -102,9 +97,7 @@ async def __call__( # Some authentication flows require a prior redirect to id provider if isinstance(user_info_or_auth_redirect, RedirectResponse): - return await user_info_or_auth_redirect.__call__( - scope, receive, send - ) + return await user_info_or_auth_redirect.__call__(scope, receive, send) if not successful: return await self.get_unauthorized_response(scope, receive, send) @@ -114,7 +107,5 @@ async def __call__( async def get_unauthorized_response( scope: Scope, receive: Receive, send: Send ) -> None: - response = JSONResponse( - status_code=401, content={"message": "Unauthenticated"} - ) - return await response(scope, receive, send) \ No newline at end of file + response = JSONResponse(status_code=401, content={"message": "Unauthenticated"}) + return await response(scope, receive, send) From 4c063f0cabcfaf3aa1fdaf17e7daa5ca986def3c Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Wed, 27 Dec 2023 12:23:48 +0100 Subject: [PATCH 09/33] Add dockerignore file --- .dockerignore | 1 + 1 file changed, 1 insertion(+) create mode 100644 .dockerignore diff --git a/.dockerignore b/.dockerignore new file mode 100644 index 0000000..b694934 --- /dev/null +++ b/.dockerignore @@ -0,0 +1 @@ +.venv \ No newline at end of file From 5500c714efa51caff5f5cc23596d44676f2cada0 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Wed, 27 Dec 2023 12:24:42 +0100 Subject: [PATCH 10/33] Fix tag name generation with sanitize function --- scripts/docker/build.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/docker/build.py b/scripts/docker/build.py index 1aaf249..693967e 100644 --- a/scripts/docker/build.py +++ b/scripts/docker/build.py @@ -80,7 +80,7 @@ def main( build_command = ( f"{docker_command} buildx build " f"--platform {docker_platform} " - f"--tag '{base_image_name}:{current_git_branch}' " + f"--tag '{base_image_name}:{_sanitize_git_branch_name(current_git_branch)}' " f"--tag '{base_image_name}:{current_git_commit}' " f"--file {Path(__file__).parent.parent.parent / 'Dockerfile'} " f"--label git-commit={current_git_commit} " From e7ac0005d878c53662a454198ea7eed0b8e7bac6 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Thu, 28 Dec 2023 02:13:02 +0100 Subject: [PATCH 11/33] Handle skippable routes --- app/middleware/oidc.py | 14 ++++++++++++-- 1 file changed, 12 insertions(+), 2 deletions(-) diff --git a/app/middleware/oidc.py b/app/middleware/oidc.py index 65b818b..f8c4bd8 100644 --- a/app/middleware/oidc.py +++ b/app/middleware/oidc.py @@ -1,11 +1,11 @@ import asyncio -import logging import re from typing import List from typing import Optional from app.auth.exceptions import AuthenticationException from app.auth.oidc import OIDCProvider +from app.config.app import configuration as cfg from app.config.logging import create_logger from fastapi.responses import JSONResponse from starlette.requests import Request @@ -63,7 +63,15 @@ def __init__( ) -> None: self.config = config self.app = app - self.skip_endpoints = [re.compile(skip) for skip in skip_endpoints] + if cfg.FASTGEOAPI_CONTEXT and not cfg.FASTGEOAPI_CONTEXT in skip_endpoints: + self.skip_endpoints = [ + re.compile(f"{cfg.FASTGEOAPI_CONTEXT}{skip}") for skip in skip_endpoints + ] + else: + self.skip_endpoints = [ + re.compile(skip) for skip in skip_endpoints + ] + logger.debug(f"Compiled skippable endpoints: {self.skip_endpoints}") async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: if scope["type"] == "lifespan": @@ -77,7 +85,9 @@ async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: return await self.app(scope, receive, send) # allow openapi endpoints without authentication + logger.debug(f"Evaluate if {request.url.path} is skippable") if should_skip_endpoint(request.url.path, self.skip_endpoints): + logger.info(f"{request.url.path} is skippable") return await self.app(scope, receive, send) # authenticate user or get redirect to identity provider From ce1bab34b65d4c1e64bb21e329164c4fba64b426 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Thu, 28 Dec 2023 02:17:05 +0100 Subject: [PATCH 12/33] Improve error handling and add oidc security scheme type --- app/middleware/pygeoapi.py | 74 +++++++++++++++++++++++--------------- 1 file changed, 46 insertions(+), 28 deletions(-) diff --git a/app/middleware/pygeoapi.py b/app/middleware/pygeoapi.py index 737764b..bcf4d85 100644 --- a/app/middleware/pygeoapi.py +++ b/app/middleware/pygeoapi.py @@ -4,6 +4,7 @@ from openapi_pydantic.v3.v3_0_3 import OpenAPI from openapi_pydantic.v3.v3_0_3 import SecurityScheme +from pydantic_core import ValidationError from starlette.datastructures import Headers from starlette.datastructures import MutableHeaders from starlette.types import ASGIApp @@ -12,6 +13,10 @@ from starlette.types import Scope from starlette.types import Send +from app.config.logging import create_logger + + +logger = create_logger("app.middleware.pygeoapi") routes_with_middleware = ["/openapi"] queryparams_with_middleware = ["f=json"] @@ -72,11 +77,16 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 headers_dict = dict(headers.items()) content_type = headers_dict.get("content-type") if "application/vnd.oai.openapi+json" not in str(content_type): - raise ValueError(f"Unsupported content type: {content_type}") + logger.error(f"Incosistent content-type: {content_type}") + raise ValueError(f"Wrong content-type: {content_type} for openapi path") self.headers.update(headers_dict) if message_type == "http.response.body": initial_body = message.get("body", b"").decode() - openapi = OpenAPI.model_validate_json(initial_body) + try: + openapi = OpenAPI.model_validate_json(initial_body) + except ValidationError as e: + logger.error(e) + raise if self.security_scheme.type == "apiKey": security_schemes = { "securitySchemes": { @@ -85,29 +95,37 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 ) } } - body = openapi.model_dump(by_alias=True, exclude_none=True) - components = body.get("components") - if components: - components.update(security_schemes) - body["components"] = components - paths = openapi.paths - if paths: - secured_paths = {} - for key, value in paths.items(): - if value.get: - value.get.security = [{"PygeoApiKey": []}] - if value.post: - value.post.security = [{"PygeoApiKey": []}] - secured_paths.update({key: value}) - if secured_paths: - body["paths"] = secured_paths - binary_body = ( - OpenAPI(**body) - .model_dump_json(by_alias=True, exclude_none=True, indent=2) - .encode() - ) - headers = MutableHeaders(raw=self.initial_message["headers"]) - headers["Content-Length"] = str(len(binary_body)) - message["body"] = binary_body - await self.send(self.initial_message) - await self.send(message) + elif self.security_scheme.type == "openIdConnect": + security_schemes = { + "securitySchemes": { + "openId": self.security_scheme.model_dump( + by_alias=True, exclude_none=True + ) + } + } + body = openapi.model_dump(by_alias=True, exclude_none=True) + components = body.get("components") + if components: + components.update(security_schemes) + body["components"] = components + paths = openapi.paths + if paths: + secured_paths = {} + for key, value in paths.items(): + if value.get: + value.get.security = [{"PygeoApiKey": []}] + if value.post: + value.post.security = [{"PygeoApiKey": []}] + secured_paths.update({key: value}) + if secured_paths: + body["paths"] = secured_paths + binary_body = ( + OpenAPI(**body) + .model_dump_json(by_alias=True, exclude_none=True, indent=2) + .encode() + ) + headers = MutableHeaders(raw=self.initial_message["headers"]) + headers["Content-Length"] = str(len(binary_body)) + message["body"] = binary_body + await self.send(self.initial_message) + await self.send(message) From e1afed6e9bb83285c599668ed9c5430327125eda Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Thu, 28 Dec 2023 23:39:43 +0100 Subject: [PATCH 13/33] Update dependencies --- poetry.lock | 48 ++++++++++++++++++++++++------------------------ pyproject.toml | 4 ++-- 2 files changed, 26 insertions(+), 26 deletions(-) diff --git a/poetry.lock b/poetry.lock index 5a7cff0..cb9c4df 100644 --- a/poetry.lock +++ b/poetry.lock @@ -28,24 +28,25 @@ files = [ [[package]] name = "anyio" -version = "3.7.1" +version = "4.2.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "anyio-3.7.1-py3-none-any.whl", hash = "sha256:91dee416e570e92c64041bd18b900d1d6fa78dff7048769ce5ac5ddad004fbb5"}, - {file = "anyio-3.7.1.tar.gz", hash = "sha256:44a3c9aba0f5defa43261a8b3efb97891f2bd7d804e0e1f56419befa1adfc780"}, + {file = "anyio-4.2.0-py3-none-any.whl", hash = "sha256:745843b39e829e108e518c489b31dc757de7d2131d53fac32bd8df268227bfee"}, + {file = "anyio-4.2.0.tar.gz", hash = "sha256:e1875bb4b4e2de1669f4bc7869b6d3f54231cdced71605e6e64c9be77e3be50f"}, ] [package.dependencies] -exceptiongroup = {version = "*", markers = "python_version < \"3.11\""} +exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""} idna = ">=2.8" sniffio = ">=1.1" +typing-extensions = {version = ">=4.1", markers = "python_version < \"3.11\""} [package.extras] -doc = ["Sphinx", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme (>=1.2.2)", "sphinxcontrib-jquery"] -test = ["anyio[trio]", "coverage[toml] (>=4.5)", "hypothesis (>=4.0)", "mock (>=4)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"] -trio = ["trio (<0.22)"] +doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"] +test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"] +trio = ["trio (>=0.23)"] [[package]] name = "argcomplete" @@ -787,17 +788,16 @@ resolved_reference = "67e3ec128cf8d44be6e48e775234c07f4b23064e" [[package]] name = "fastapi" -version = "0.106.0" +version = "0.108.0" description = "FastAPI framework, high performance, easy to learn, fast to code, ready for production" optional = false python-versions = ">=3.8" files = [ - {file = "fastapi-0.106.0-py3-none-any.whl", hash = "sha256:193c2f1b495d1d6561a3dc1ca02a150757322247d895ff6bf15b6eefee24feb9"}, - {file = "fastapi-0.106.0.tar.gz", hash = "sha256:c7e7453ac8c4b7414bbafcf90127d743559808eee286ae2c9f99a501f0b534a0"}, + {file = "fastapi-0.108.0-py3-none-any.whl", hash = "sha256:8c7bc6d315da963ee4cdb605557827071a9a7f95aeb8fcdd3bde48cdc8764dd7"}, + {file = "fastapi-0.108.0.tar.gz", hash = "sha256:5056e504ac6395bf68493d71fcfc5352fdbd5fda6f88c21f6420d80d81163296"}, ] [package.dependencies] -anyio = ">=3.7.1,<4.0.0" email-validator = {version = ">=2.0.0", optional = true, markers = "extra == \"all\""} httpx = {version = ">=0.23.0", optional = true, markers = "extra == \"all\""} itsdangerous = {version = ">=1.1.0", optional = true, markers = "extra == \"all\""} @@ -808,7 +808,7 @@ pydantic-extra-types = {version = ">=2.0.0", optional = true, markers = "extra = pydantic-settings = {version = ">=2.0.0", optional = true, markers = "extra == \"all\""} python-multipart = {version = ">=0.0.5", optional = true, markers = "extra == \"all\""} pyyaml = {version = ">=5.3.1", optional = true, markers = "extra == \"all\""} -starlette = ">=0.27.0,<0.28.0" +starlette = ">=0.29.0,<0.33.0" typing-extensions = ">=4.8.0" ujson = {version = ">=4.0.1,<4.0.2 || >4.0.2,<4.1.0 || >4.1.0,<4.2.0 || >4.2.0,<4.3.0 || >4.3.0,<5.0.0 || >5.0.0,<5.1.0 || >5.1.0", optional = true, markers = "extra == \"all\""} uvicorn = {version = ">=0.12.0", extras = ["standard"], optional = true, markers = "extra == \"all\""} @@ -1847,13 +1847,13 @@ files = [ [[package]] name = "openapi-pydantic" -version = "0.3.2" +version = "0.4.0" description = "Pydantic OpenAPI schema implementation" optional = false python-versions = ">=3.8,<4.0" files = [ - {file = "openapi_pydantic-0.3.2-py3-none-any.whl", hash = "sha256:24488566a0a61bee3b55de6d3665329adaf2aadfe8f292ac0bddfe22155fadac"}, - {file = "openapi_pydantic-0.3.2.tar.gz", hash = "sha256:685aa631395c469ecfd04f01a2ffedd541f94d372943868a501b412e9de6ba8b"}, + {file = "openapi_pydantic-0.4.0-py3-none-any.whl", hash = "sha256:8f782be72a4792bf6b5bbc4cf694fda2ca0719c0354ee6a062179982544fb5c0"}, + {file = "openapi_pydantic-0.4.0.tar.gz", hash = "sha256:22c43e0da5f479d28e11c083d6d3492e09a6ef9e2b3201ccddbfbc8786db1ffb"}, ] [package.dependencies] @@ -2491,13 +2491,13 @@ tests = ["coverage[toml] (==5.0.4)", "pytest (>=6.0.0,<7.0.0)"] [[package]] name = "pymdown-extensions" -version = "10.5" +version = "10.6" description = "Extension pack for Python Markdown." optional = false python-versions = ">=3.8" files = [ - {file = "pymdown_extensions-10.5-py3-none-any.whl", hash = "sha256:1f0ca8bb5beff091315f793ee17683bc1390731f6ac4c5eb01e27464b80fe879"}, - {file = "pymdown_extensions-10.5.tar.gz", hash = "sha256:1b60f1e462adbec5a1ed79dac91f666c9c0d241fa294de1989f29d20096cfd0b"}, + {file = "pymdown_extensions-10.6-py3-none-any.whl", hash = "sha256:561eb3a5f3c3c2512952a4d6f5b311aa124b7147bd54a3ea0f36ce030c7e3dd9"}, + {file = "pymdown_extensions-10.6.tar.gz", hash = "sha256:e4531379e0d74b329ff264217ef5b8b1a37bed3afe36f98001b74ecff52215c0"}, ] [package.dependencies] @@ -3425,13 +3425,13 @@ tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"] [[package]] name = "starlette" -version = "0.27.0" +version = "0.32.0.post1" description = "The little ASGI library that shines." optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "starlette-0.27.0-py3-none-any.whl", hash = "sha256:918416370e846586541235ccd38a474c08b80443ed31c578a418e2209b3eef91"}, - {file = "starlette-0.27.0.tar.gz", hash = "sha256:6a6b0d042acb8d469a01eba54e9cda6cbd24ac602c4cd016723117d6a7e73b75"}, + {file = "starlette-0.32.0.post1-py3-none-any.whl", hash = "sha256:cd0cb10ddb49313f609cedfac62c8c12e56c7314b66d89bb077ba228bada1b09"}, + {file = "starlette-0.32.0.post1.tar.gz", hash = "sha256:e54e2b7e2fb06dff9eac40133583f10dfa05913f5a85bf26f427c7a40a9a3d02"}, ] [package.dependencies] @@ -4117,4 +4117,4 @@ testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "p [metadata] lock-version = "2.0" python-versions = ">=3.9,<4.0" -content-hash = "7e6e315ea3cd4e996f91a3f6312b5c78e4756ed0f82a7a186a03ef299dd467f0" +content-hash = "a2bb231921e645ba7f7c040a99ffc2cc464c561650a101c4ec98073b692ecac1" diff --git a/pyproject.toml b/pyproject.toml index 6429beb..29202df 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -29,7 +29,7 @@ fastapi-opa = "^1.4.7" rasterio = "1.3.9" # fix https://github.com/rasterio/rasterio/issues/2333 pygeoapi = {git = "https://github.com/geopython/pygeoapi", rev = "master"} uvicorn = {extras = ["standard"], version = "^0.25.0"} -fastapi = {extras = ["all"], version = "^0.106"} +fastapi = {extras = ["all"], version = "^0.108"} typer = {extras = ["all"], version = "^0.9.0"} nest-asyncio = "^1.5.6" fastapi-key-auth = "^0.12.0" @@ -37,7 +37,7 @@ sqlalchemy = "^1.4.50" geoalchemy2 = "^0.12.5" shapely = "<2.0" psycopg2 = "^2.9.7" -openapi-pydantic = "^0.3.2" +openapi-pydantic = "^0.4.0" pygeofilter = {extras = ["backend-sqlalchemy"], version = "^0.2.1"} pydantic-settings = "^2.1.0" authlib = "^1.3.0" From d50db0881ee9f988c9a2f2db9f3dfc322c627ab9 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Thu, 28 Dec 2023 23:40:31 +0100 Subject: [PATCH 14/33] Fix raised exceptions --- app/auth/auth_jwks.py | 8 ++++---- app/middleware/oidc.py | 9 ++++++--- 2 files changed, 10 insertions(+), 7 deletions(-) diff --git a/app/auth/auth_jwks.py b/app/auth/auth_jwks.py index b62aecf..4d0f716 100644 --- a/app/auth/auth_jwks.py +++ b/app/auth/auth_jwks.py @@ -36,7 +36,7 @@ async def get_jwks(self) -> KeySet: Get cached or new JWKS. """ url = self.config.jwks_uri - # logger.info(f"Fetching JWKS from {url}") + logger.info(f"Fetching JSON Web Key Set from {url}") async with httpx.AsyncClient() as client: response = await client.get(url) return JsonWebKey.import_key_set(response.json()) @@ -63,11 +63,11 @@ async def decode_token( claims.setdefault("aud", claims["client_id"]) claims.validate() except errors.ExpiredTokenError: - logger.error("Unable to validate token") - raise HTTPException(status_code=401, detail="Expired auth token") + logger.error("Unable to validate an expired token") + raise OIDCException("Unable to validate an expired token") except errors.JoseError: logger.error("Unable to decode token") - raise HTTPException(status_code=403, detail="Bad auth token") + raise OIDCException("Unable to decode token") return claims diff --git a/app/middleware/oidc.py b/app/middleware/oidc.py index f8c4bd8..f7b6e6b 100644 --- a/app/middleware/oidc.py +++ b/app/middleware/oidc.py @@ -3,7 +3,7 @@ from typing import List from typing import Optional -from app.auth.exceptions import AuthenticationException +from app.auth.exceptions import OIDCException from app.auth.oidc import OIDCProvider from app.config.app import configuration as cfg from app.config.logging import create_logger @@ -99,11 +99,14 @@ async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: ) if asyncio.iscoroutine(user_info_or_auth_redirect): user_info_or_auth_redirect = await user_info_or_auth_redirect + logger.debug( + f"user info taken from jwt is: {user_info_or_auth_redirect}" + ) if isinstance(user_info_or_auth_redirect, dict): successful = True break - except AuthenticationException: - logger.error("AuthenticationException raised on login") + except OIDCException as e: + logger.error("Authentication Exception raised on login") # Some authentication flows require a prior redirect to id provider if isinstance(user_info_or_auth_redirect, RedirectResponse): From 516dfcdc4b8419b4391843d13067ea1dbc4d10d3 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Mon, 1 Jan 2024 17:01:49 +0100 Subject: [PATCH 15/33] Update pygeoapi dependency --- poetry.lock | 245 ++++++++++++++++++++++++++-------------------------- 1 file changed, 123 insertions(+), 122 deletions(-) diff --git a/poetry.lock b/poetry.lock index cb9c4df..d2b79d7 100644 --- a/poetry.lock +++ b/poetry.lock @@ -82,21 +82,22 @@ test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"] [[package]] name = "attrs" -version = "23.1.0" +version = "23.2.0" description = "Classes Without Boilerplate" optional = false python-versions = ">=3.7" files = [ - {file = "attrs-23.1.0-py3-none-any.whl", hash = "sha256:1f28b4522cdc2fb4256ac1a020c78acf9cba2c6b461ccd2c126f3aa8e8335d04"}, - {file = "attrs-23.1.0.tar.gz", hash = "sha256:6279836d581513a26f1bf235f9acd333bc9115683f14f7e8fae46c98fc50e015"}, + {file = "attrs-23.2.0-py3-none-any.whl", hash = "sha256:99b87a485a5820b23b879f04c2305b44b951b502fd64be915879d77a7e8fc6f1"}, + {file = "attrs-23.2.0.tar.gz", hash = "sha256:935dc3b529c262f6cf76e50877d35a4bd3c1de194fd41f47a2b7ae8f19971f30"}, ] [package.extras] cov = ["attrs[tests]", "coverage[toml] (>=5.3)"] -dev = ["attrs[docs,tests]", "pre-commit"] +dev = ["attrs[tests]", "pre-commit"] docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"] tests = ["attrs[tests-no-zope]", "zope-interface"] -tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"] +tests-mypy = ["mypy (>=1.6)", "pytest-mypy-plugins"] +tests-no-zope = ["attrs[tests-mypy]", "cloudpickle", "hypothesis", "pympler", "pytest (>=4.3.0)", "pytest-xdist[psutil]"] [[package]] name = "authlib" @@ -755,13 +756,13 @@ files = [ [[package]] name = "faker" -version = "21.0.0" +version = "22.0.0" description = "Faker is a Python package that generates fake data for you." optional = false python-versions = ">=3.8" files = [ - {file = "Faker-21.0.0-py3-none-any.whl", hash = "sha256:ff61cca42547795bee8a11319792a8fee6d0f0cd191e831f7f3050c5851fcd8a"}, - {file = "Faker-21.0.0.tar.gz", hash = "sha256:2d8a350e952225a145307d7461881c44a1c9320e90fbe8bd903d5947f133f3ec"}, + {file = "Faker-22.0.0-py3-none-any.whl", hash = "sha256:9c22c0a734ca01c6e4f2259eab5dab9081905a9d67b27272aea5c9feeb5a3789"}, + {file = "Faker-22.0.0.tar.gz", hash = "sha256:1d5dc0a75da7bc40741ee4c84d99dc087b97bd086d4222ad06ac4dd2219bcf3f"}, ] [package.dependencies] @@ -2312,17 +2313,17 @@ typing-extensions = ">=4.6.0,<4.7.0 || >4.7.0" [[package]] name = "pydantic-extra-types" -version = "2.2.0" +version = "2.3.0" description = "Extra Pydantic types." optional = false python-versions = ">=3.7" files = [ - {file = "pydantic_extra_types-2.2.0-py3-none-any.whl", hash = "sha256:d4c6bcab0ea4b5300075ae7a664c134d923ac35496ad8caa0feae30234f14756"}, - {file = "pydantic_extra_types-2.2.0.tar.gz", hash = "sha256:7f2fdd5251729745983cf8cdc5e431ffee2362f283fff54f68122625cef82c11"}, + {file = "pydantic_extra_types-2.3.0-py3-none-any.whl", hash = "sha256:899043975a7f17ec85dc75e3328b832e1ef9414e0a495a9f420850c4d9d85b5a"}, + {file = "pydantic_extra_types-2.3.0.tar.gz", hash = "sha256:dcd4b215957d93fdd7c7fdb908444c0bad869a93b8e5625b07fd119bc1653322"}, ] [package.dependencies] -pydantic = ">=2.0.3" +pydantic = ">=2.5.2" [package.extras] all = ["phonenumbers (>=8,<9)", "pycountry (>=22,<23)", "python-ulid (>=1,<2)"] @@ -2406,7 +2407,7 @@ unicodecsv = "*" type = "git" url = "https://github.com/geopython/pygeoapi" reference = "master" -resolved_reference = "b78d28bcfd9510d3f25dd5d3c96225714db3ffaa" +resolved_reference = "05965a2982ee4a449cd996736889b7ebbe0f429a" [[package]] name = "pygeofilter" @@ -2491,13 +2492,13 @@ tests = ["coverage[toml] (==5.0.4)", "pytest (>=6.0.0,<7.0.0)"] [[package]] name = "pymdown-extensions" -version = "10.6" +version = "10.7" description = "Extension pack for Python Markdown." optional = false python-versions = ">=3.8" files = [ - {file = "pymdown_extensions-10.6-py3-none-any.whl", hash = "sha256:561eb3a5f3c3c2512952a4d6f5b311aa124b7147bd54a3ea0f36ce030c7e3dd9"}, - {file = "pymdown_extensions-10.6.tar.gz", hash = "sha256:e4531379e0d74b329ff264217ef5b8b1a37bed3afe36f98001b74ecff52215c0"}, + {file = "pymdown_extensions-10.7-py3-none-any.whl", hash = "sha256:6ca215bc57bc12bf32b414887a68b810637d039124ed9b2e5bd3325cbb2c050c"}, + {file = "pymdown_extensions-10.7.tar.gz", hash = "sha256:c0d64d5cf62566f59e6b2b690a4095c931107c250a8c8e1351c1de5f6b036deb"}, ] [package.dependencies] @@ -2587,13 +2588,13 @@ resolved_reference = "ca192a80b76700118b9bfd261a3d098b92ccfc31" [[package]] name = "pytest" -version = "7.4.3" +version = "7.4.4" description = "pytest: simple powerful testing with Python" optional = false python-versions = ">=3.7" files = [ - {file = "pytest-7.4.3-py3-none-any.whl", hash = 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hash = "sha256:781ef8bfc091b19960fc0142a23aedadafa826bc32b433fdfe6fd7f964d7ef44"}, ] [[package]] @@ -3594,13 +3595,13 @@ files = [ [[package]] name = "tzdata" -version = "2023.3" +version = "2023.4" description = "Provider of IANA time zone data" optional = false python-versions = ">=2" files = [ - {file = "tzdata-2023.3-py2.py3-none-any.whl", hash = "sha256:7e65763eef3120314099b6939b5546db7adce1e7d6f2e179e3df563c70511eda"}, - {file = "tzdata-2023.3.tar.gz", hash = "sha256:11ef1e08e54acb0d4f95bdb1be05da659673de4acbd21bf9c69e94cc5e907a3a"}, + {file = "tzdata-2023.4-py2.py3-none-any.whl", hash = "sha256:aa3ace4329eeacda5b7beb7ea08ece826c28d761cda36e747cfbf97996d39bf3"}, + {file = "tzdata-2023.4.tar.gz", hash = "sha256:dd54c94f294765522c77399649b4fefd95522479a664a0cec87f41bebc6148c9"}, ] [[package]] From 236b88a59773075cef07fa88cf9715c4a67d4485 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Mon, 1 Jan 2024 22:59:30 +0100 Subject: [PATCH 16/33] Add oauth2 security scheme --- .env | 9 ++++-- app/auth/auth_jwks.py | 10 +++--- app/auth/exceptions.py | 4 +-- app/auth/{oidc.py => oauth2.py} | 4 +-- app/config/app.py | 20 +++++++++--- app/config/auth.py | 6 ++-- app/main.py | 44 +++++++++++++++---------- app/middleware/{oidc.py => oauth2.py} | 12 +++---- app/middleware/pygeoapi.py | 46 ++++++++++++++++----------- 9 files changed, 95 insertions(+), 60 deletions(-) rename app/auth/{oidc.py => oauth2.py} (94%) rename app/middleware/{oidc.py => oauth2.py} (94%) diff --git a/.env b/.env index e2f343f..91a3a71 100644 --- a/.env +++ b/.env @@ -46,12 +46,13 @@ DEV_OIDC_CLIENT_ID=pygeoapi-client DEV_OIDC_CLIENT_SECRET=2yholx8r3mqyUJaOoJiZhcqvQDQwmgyD # oidc-jwks-only DEV_JWKS_ENABLED=true -# DEV_OIDC_JWKS_ENDPOINT=https://ssopre.comune.roma.it/ssoservice/oauth2/realms/root/realms/public/connect/jwk_uri -DEV_OIDC_JWKS_ENDPOINT=https://uat.interop.pagopa.it/.well-known/jwks.json +DEV_OAUTH2_JWKS_ENDPOINT=https://uat.interop.pagopa.it/.well-known/jwks.json +DEV_OAUTH2_TOKEN_ENDPOINT=https://auth.uat.interop.pagopa.it/token.oauth2 # pygeoapi DEV_PYGEOAPI_BASEURL=http://localhost:5000 DEV_PYGEOAPI_CONFIG=pygeoapi-config.yml DEV_PYGEOAPI_OPENAPI=pygeoapi-openapi.yml +DEV_PYGEOAPI_SECURITY_SCHEME=http # fastgeoapi DEV_FASTGEOAPI_CONTEXT=/geoapi @@ -79,10 +80,12 @@ PROD_OIDC_CLIENT_ID=pygeoapi-client PROD_OIDC_CLIENT_SECRET=2yholx8r3mqyUJaOoJiZhcqvQDQwmgyD # oidc-jwks-only PROD_JWKS_ENABLED=false -PROD_OIDC_JWKS_ENDPOINT= +PROD_OAUTH2_JWKS_ENDPOINT=https://interop.pagopa.it/.well-known/jwks.json +PROD_OAUTH2_TOKEN_ENDPOINT=https://auth.interop.pagopa.it/token.oauth2 # pygeoapi PROD_PYGEOAPI_BASEURL=http://localhost:5000 PROD_PYGEOAPI_CONFIG=pygeoapi-config.yml PROD_PYGEOAPI_OPENAPI=pygeoapi-openapi.yml +PROD_PYGEOAPI_SECURITY_SCHEME=http # fastgeoapi PROD_FASTGEOAPI_CONTEXT=/geoapi diff --git a/app/auth/auth_jwks.py b/app/auth/auth_jwks.py index 4d0f716..866acd9 100644 --- a/app/auth/auth_jwks.py +++ b/app/auth/auth_jwks.py @@ -4,7 +4,7 @@ import httpx from app.auth.auth_interface import AuthInterface -from app.auth.exceptions import OIDCException +from app.auth.exceptions import Oauth2Exception from app.config.logging import create_logger from authlib.jose import errors from authlib.jose import JsonWebKey @@ -64,10 +64,10 @@ async def decode_token( claims.validate() except errors.ExpiredTokenError: logger.error("Unable to validate an expired token") - raise OIDCException("Unable to validate an expired token") + raise Oauth2Exception("Unable to validate an expired token") except errors.JoseError: logger.error("Unable to decode token") - raise OIDCException("Unable to decode token") + raise Oauth2Exception("Unable to decode token") return claims @@ -79,7 +79,7 @@ async def authenticate( bearer = request.headers.get("Authorization") if not bearer: logger.exception("Unable to get a token") - raise OIDCException("Auth token not found") + raise Oauth2Exception("Auth token not found") access_token = bearer.replace("Bearer ", "") try: claims = await self.decode_token(access_token) @@ -87,4 +87,4 @@ async def authenticate( pass return claims except: - raise OIDCException("Authentication error") + raise Oauth2Exception("Authentication error") diff --git a/app/auth/exceptions.py b/app/auth/exceptions.py index 8c79779..e1da036 100644 --- a/app/auth/exceptions.py +++ b/app/auth/exceptions.py @@ -4,7 +4,7 @@ class AuthenticationException(Exception): pass -class OIDCException(AuthenticationException): - """OIDC authentication flow exception.""" +class Oauth2Exception(AuthenticationException): + """Oauth2 authentication flow exception.""" pass diff --git a/app/auth/oidc.py b/app/auth/oauth2.py similarity index 94% rename from app/auth/oidc.py rename to app/auth/oauth2.py index 942eadf..0a653e0 100644 --- a/app/auth/oidc.py +++ b/app/auth/oauth2.py @@ -18,7 +18,7 @@ async def extract(self, request: Request) -> List: pass -class OIDCProvider: +class Oauth2Provider: def __init__( self, authentication: [AuthInterface, List[AuthInterface]], @@ -26,7 +26,7 @@ def __init__( accepted_methods: Optional[List[str]] = ["id_token", "access_token"], ) -> None: """ - Configuration container for the OIDCMiddleware. + Configuration container for the Oauth2Middleware. PARAMETERS ---------- diff --git a/app/config/app.py b/app/config/app.py index 5cb4e68..6f7de00 100644 --- a/app/config/app.py +++ b/app/config/app.py @@ -70,8 +70,11 @@ class DevConfig(GlobalConfig): JWKS_ENABLED: Optional[bool] = pydantic.Field( None, env="DEV_JWKS_ENABLED" ) # type: ignore - OIDC_JWKS_ENDPOINT: Optional[str] = pydantic.Field( - None, env="DEV_OIDC_JWKS_ENDPOINT" + OAUTH2_JWKS_ENDPOINT: Optional[str] = pydantic.Field( + None, env="DEV_OAUTH2_JWKS_ENDPOINT" + ) # type: ignore + OAUTH2_TOKEN_ENDPOINT: Optional[str] = pydantic.Field( + None, env="DEV_OAUTH2_TOKEN_ENDPOINT" ) # type: ignore PYGEOAPI_KEY_GLOBAL: Optional[str] = pydantic.Field( None, env="DEV_PYGEOAPI_KEY_GLOBAL" @@ -85,6 +88,9 @@ class DevConfig(GlobalConfig): PYGEOAPI_OPENAPI: Optional[str] = pydantic.Field( None, env="DEV_PYGEOAPI_OPENAPI" ) # type: ignore + PYGEOAPI_SECURITY_SCHEME: Optional[str] = pydantic.Field( + None, env="DEV_PYGEOAPI_SECURITY_SCHEME" + ) # type: ignore FASTGEOAPI_CONTEXT: Optional[str] = pydantic.Field( None, env="DEV_FASTGEOAPI_CONTEXT" ) # type: ignore @@ -137,8 +143,11 @@ class ProdConfig(GlobalConfig): API_KEY_ENABLED: Optional[bool] = pydantic.Field( None, env="PROD_API_KEY_ENABLED" ) # type: ignore - OIDC_JWKS_ENDPOINT: Optional[str] = pydantic.Field( - None, env="PROD_OIDC_JWKS_ENDPOINT" + OAUTH2_JWKS_ENDPOINT: Optional[str] = pydantic.Field( + None, env="PROD_OAUTH2_JWKS_ENDPOINT" + ) # type: ignore + OAUTH2_TOKEN_ENDPOINT: Optional[str] = pydantic.Field( + None, env="PROD_OAUTH2_TOKEN_ENDPOINT" ) # type: ignore PYGEOAPI_KEY_GLOBAL: Optional[str] = pydantic.Field( None, env="PROD_PYGEOAPI_KEY_GLOBAL" @@ -152,6 +161,9 @@ class ProdConfig(GlobalConfig): PYGEOAPI_OPENAPI: Optional[str] = pydantic.Field( None, env="PROD_PYGEOAPI_OPENAPI" ) # type: ignore + PYGEOAPI_SECURITY_SCHEME: Optional[str] = pydantic.Field( + None, env="PROD_PYGEOAPI_SECURITY_SCHEME" + ) # type: ignore FASTGEOAPI_CONTEXT: Optional[str] = pydantic.Field( None, env="PROD_FASTGEOAPI_CONTEXT" ) # type: ignore diff --git a/app/config/auth.py b/app/config/auth.py index 02221ca..558b4db 100644 --- a/app/config/auth.py +++ b/app/config/auth.py @@ -1,7 +1,7 @@ """Authn and Authz module.""" from app.auth.auth_jwks import JWKSAuthentication from app.auth.auth_jwks import JWKSConfig -from app.auth.oidc import OIDCProvider +from app.auth.oauth2 import Oauth2Provider from app.config.app import configuration as cfg from fastapi_opa import OPAConfig from fastapi_opa.auth import OIDCAuthentication @@ -24,6 +24,6 @@ oidc_auth = OIDCAuthentication(oidc_config) auth_config = OPAConfig(authentication=oidc_auth, opa_host=opa_host) elif cfg.JWKS_ENABLED: - jwks_config = JWKSConfig(jwks_uri=cfg.OIDC_JWKS_ENDPOINT) + jwks_config = JWKSConfig(jwks_uri=cfg.OAUTH2_JWKS_ENDPOINT) jwks_auth = JWKSAuthentication(jwks_config) - auth_config = OIDCProvider(authentication=jwks_auth) + auth_config = Oauth2Provider(authentication=jwks_auth) diff --git a/app/main.py b/app/main.py index a3ea414..8124874 100644 --- a/app/main.py +++ b/app/main.py @@ -8,7 +8,7 @@ import uvicorn from app.config.app import configuration as cfg from app.config.logging import create_logger -from app.middleware.oidc import OIDCMiddleware +from app.middleware.oauth2 import Oauth2Middleware from app.middleware.pygeoapi import OpenapiSecurityMiddleware from app.utils.app_exceptions import app_exception_handler from app.utils.app_exceptions import AppExceptionError @@ -21,7 +21,7 @@ from fastapi_opa import OPAMiddleware from loguru import logger from mangum import Mangum -from openapi_pydantic.v3.v3_0_3 import SecurityScheme +from openapi_pydantic.v3.v3_0_3 import SecurityScheme, OAuthFlows, OAuthFlow from pygeoapi.l10n import LocaleError from pygeoapi.openapi import generate_openapi_document from pygeoapi.provider.base import ProviderConnectionError @@ -124,11 +124,10 @@ async def custom_app_exception_handler(request, e): PYGEOAPI_APP.add_middleware(OPAMiddleware, config=auth_config) - security_scheme = SecurityScheme( + security_schemes = [SecurityScheme( type="openIdConnect", - name="OIDC", openIdConnectUrl=cfg.OIDC_WELL_KNOWN_ENDPOINT, - ) + )] elif cfg.JWKS_ENABLED: if cfg.API_KEY_ENABLED or cfg.OPA_ENABLED: raise ValueError( @@ -136,13 +135,26 @@ async def custom_app_exception_handler(request, e): ) from app.config.auth import auth_config - PYGEOAPI_APP.add_middleware(OIDCMiddleware, config=auth_config) - - security_scheme = SecurityScheme( - type="openIdConnect", - name="OIDC", - openIdConnectUrl=cfg.OIDC_JWKS_ENDPOINT, - ) + PYGEOAPI_APP.add_middleware(Oauth2Middleware, config=auth_config) + + security_schemes = [ + SecurityScheme( + type="oauth2", + name="pygeoapi", + flows=OAuthFlows( + clientCredentials=OAuthFlow( + tokenUrl=cfg.OAUTH2_TOKEN_ENDPOINT, + scopes={} + ) + ) + ), + SecurityScheme( + type="http", + name="pygeoapi", + scheme="bearer", + bearerFormat="JWT" + ) + ] elif cfg.API_KEY_ENABLED: if cfg.OPA_ENABLED: raise ValueError("OPA_ENABLED and API_KEY_ENABLED are mutually exclusive") @@ -156,13 +168,13 @@ async def custom_app_exception_handler(request, e): AuthorizerMiddleware, public_paths=["/openapi"], key_pattern="PYGEOAPI_KEY_" ) - security_scheme = SecurityScheme( + security_schemes = [SecurityScheme( type="apiKey", name="X-API-KEY", security_scheme_in="header" - ) + )] - if security_scheme: + if security_schemes: PYGEOAPI_APP.add_middleware( - OpenapiSecurityMiddleware, security_scheme=security_scheme + OpenapiSecurityMiddleware, security_schemes=security_schemes ) app.mount(path=cfg.FASTGEOAPI_CONTEXT, app=PYGEOAPI_APP) diff --git a/app/middleware/oidc.py b/app/middleware/oauth2.py similarity index 94% rename from app/middleware/oidc.py rename to app/middleware/oauth2.py index f7b6e6b..8a30dda 100644 --- a/app/middleware/oidc.py +++ b/app/middleware/oauth2.py @@ -3,8 +3,8 @@ from typing import List from typing import Optional -from app.auth.exceptions import OIDCException -from app.auth.oidc import OIDCProvider +from app.auth.exceptions import Oauth2Exception +from app.auth.oauth2 import Oauth2Provider from app.config.app import configuration as cfg from app.config.logging import create_logger from fastapi.responses import JSONResponse @@ -22,7 +22,7 @@ Pattern = None -logger = create_logger("app.middleware.oidc") +logger = create_logger("app.middleware.oauth2") def should_skip_endpoint(endpoint: str, skip_endpoints: List[Pattern]) -> bool: @@ -49,11 +49,11 @@ async def __call__(self): return self.data -class OIDCMiddleware: +class Oauth2Middleware: def __init__( self, app: ASGIApp, - config: OIDCProvider, + config: Oauth2Provider, skip_endpoints: Optional[List[str]] = [ "/openapi", "/openapi.json", @@ -105,7 +105,7 @@ async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: if isinstance(user_info_or_auth_redirect, dict): successful = True break - except OIDCException as e: + except Oauth2Exception as e: logger.error("Authentication Exception raised on login") # Some authentication flows require a prior redirect to id provider diff --git a/app/middleware/pygeoapi.py b/app/middleware/pygeoapi.py index bcf4d85..f6de1a9 100644 --- a/app/middleware/pygeoapi.py +++ b/app/middleware/pygeoapi.py @@ -1,6 +1,7 @@ """Openapi middleware module.""" from typing import Any from typing import Dict +from typing import List from openapi_pydantic.v3.v3_0_3 import OpenAPI from openapi_pydantic.v3.v3_0_3 import SecurityScheme @@ -13,6 +14,7 @@ from starlette.types import Scope from starlette.types import Send +from app.config.app import configuration as cfg from app.config.logging import create_logger @@ -25,10 +27,10 @@ class OpenapiSecurityMiddleware: """Openapi security middleware.""" - def __init__(self, app: ASGIApp, security_scheme: SecurityScheme): + def __init__(self, app: ASGIApp, security_schemes: List[SecurityScheme]): """Initialize the Openapi security middleware.""" self.app = app - self.security_scheme = security_scheme + self.security_schemes = security_schemes async def __call__(self, scope: Scope, receive: Receive, send: Send): """Call the Openapi middleware.""" @@ -40,7 +42,7 @@ async def __call__(self, scope: Scope, receive: Receive, send: Send): return await self.app(scope, receive, send) else: if pygeoapi_query_params in queryparams_with_middleware: - openapi_responder = OpenAPIResponder(self.app, self.security_scheme) + openapi_responder = OpenAPIResponder(self.app, self.security_schemes) await openapi_responder(scope, receive, send) return await self.app(scope, receive, send) @@ -52,13 +54,13 @@ class OpenAPIResponder: def __init__( self, app: ASGIApp, - security_scheme: SecurityScheme, + security_schemes: List[SecurityScheme], headers: Dict[Any, Any] = {}, # noqa: B006 ): """Initialize the OpenAPI responder class.""" self.app = app self.initial_message = {} # type: Message - self.security_scheme = security_scheme + self.security_schemes = security_schemes self.headers = headers async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: @@ -87,22 +89,28 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 except ValidationError as e: logger.error(e) raise - if self.security_scheme.type == "apiKey": + security_scheme_types = [ + security_scheme.type for security_scheme in self.security_schemes + ] + if all( + item in [ + "http", "apiKey", "oauth2", "openIdConnect" + ] for item in security_scheme_types + ): security_schemes = { "securitySchemes": { - "PygeoApiKey": self.security_scheme.model_dump( - by_alias=True, exclude_none=True - ) - } - } - elif self.security_scheme.type == "openIdConnect": - security_schemes = { - "securitySchemes": { - "openId": self.security_scheme.model_dump( - by_alias=True, exclude_none=True - ) } } + dumped_schemes = {} + for scheme in self.security_schemes: + dumped_schemes.update( + { + f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": scheme.model_dump( + by_alias=True, exclude_none=True + ) + } + ) + security_schemes["securitySchemes"] = dumped_schemes body = openapi.model_dump(by_alias=True, exclude_none=True) components = body.get("components") if components: @@ -113,9 +121,9 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 secured_paths = {} for key, value in paths.items(): if value.get: - value.get.security = [{"PygeoApiKey": []}] + value.get.security = [{f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []}] if value.post: - value.post.security = [{"PygeoApiKey": []}] + value.post.security = [{f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []}] secured_paths.update({key: value}) if secured_paths: body["paths"] = secured_paths From 61f58a970673f85abcb5c8af3f257d18370313c1 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Sun, 28 Jan 2024 12:58:32 +0100 Subject: [PATCH 17/33] Fix flake8 errors --- .dockerignore | 2 +- app/auth/__init__.py | 1 + app/auth/auth_interface.py | 9 +++++++-- app/auth/auth_jwks.py | 35 +++++++++++++++++++---------------- app/auth/exceptions.py | 7 +++++-- app/auth/oauth2.py | 20 +++++++++++++++----- app/main.py | 34 +++++++++++++++++----------------- app/middleware/oauth2.py | 32 ++++++++++++++++++++++---------- app/middleware/pygeoapi.py | 25 ++++++++++++------------- scripts/docker/build.py | 2 +- 10 files changed, 100 insertions(+), 67 deletions(-) diff --git a/.dockerignore b/.dockerignore index b694934..1d17dae 100644 --- a/.dockerignore +++ b/.dockerignore @@ -1 +1 @@ -.venv \ No newline at end of file +.venv diff --git a/app/auth/__init__.py b/app/auth/__init__.py index e69de29..b6dc1cc 100644 --- a/app/auth/__init__.py +++ b/app/auth/__init__.py @@ -0,0 +1 @@ +"""Auth package.""" diff --git a/app/auth/auth_interface.py b/app/auth/auth_interface.py index 4a33a2e..6c6785a 100644 --- a/app/auth/auth_interface.py +++ b/app/auth/auth_interface.py @@ -1,3 +1,4 @@ +"""Auth interface module.""" from abc import ABC from abc import abstractmethod from typing import Dict @@ -8,13 +9,17 @@ class AuthInterface(ABC): - """The interface provides necessary methods for the OPAMiddleware + """Define the interface for the authentication instances. + + The interface provides necessary methods for the OPAMiddleware authentication flow. This allows to easily integrate various auth methods. """ @abstractmethod async def authenticate(self, request: Request) -> Union[RedirectResponse, Dict]: - """The method returns a dictionary containing the valid and authorized + """Authenticate the incoming request. + + The method returns a dictionary containing the valid and authorized users information or a redirect since some flows require calling a identity broker beforehand. """ diff --git a/app/auth/auth_jwks.py b/app/auth/auth_jwks.py index 866acd9..00a0506 100644 --- a/app/auth/auth_jwks.py +++ b/app/auth/auth_jwks.py @@ -1,40 +1,44 @@ +"""Auth JWKS module.""" import typing from dataclasses import dataclass from dataclasses import field import httpx from app.auth.auth_interface import AuthInterface -from app.auth.exceptions import Oauth2Exception +from app.auth.exceptions import Oauth2Error from app.config.logging import create_logger from authlib.jose import errors from authlib.jose import JsonWebKey from authlib.jose import JsonWebToken from authlib.jose import JWTClaims from authlib.jose import KeySet -from cachetools import cached -from cachetools import TTLCache -from fastapi import HTTPException from starlette.requests import Request from starlette.responses import RedirectResponse +# from cachetools import cached +# from cachetools import TTLCache + logger = create_logger("app.auth.auth_jwks") @dataclass class JWKSConfig: + """JWKS configuration instance.""" + jwks_uri: str = field(default="") class JWKSAuthentication(AuthInterface): + """JWKS authentication instance.""" + def __init__(self, config: JWKSConfig) -> None: + """Initialize the authentication.""" self.config = config # @cached(TTLCache(maxsize=1, ttl=3600)) async def get_jwks(self) -> KeySet: - """ - Get cached or new JWKS. - """ + """Get cached or new JWKS.""" url = self.config.jwks_uri logger.info(f"Fetching JSON Web Key Set from {url}") async with httpx.AsyncClient() as client: @@ -45,9 +49,7 @@ async def decode_token( self, token: str, ) -> JWTClaims: - """ - Validate & decode JWT. - """ + """Validate and decode JWT.""" try: jwks = await self.get_jwks() claims = JsonWebToken(["RS256"]).decode( @@ -64,27 +66,28 @@ async def decode_token( claims.validate() except errors.ExpiredTokenError: logger.error("Unable to validate an expired token") - raise Oauth2Exception("Unable to validate an expired token") + raise Oauth2Error("Unable to validate an expired token") # noqa except errors.JoseError: logger.error("Unable to decode token") - raise Oauth2Exception("Unable to decode token") + raise Oauth2Error("Unable to decode token") # noqa return claims async def authenticate( self, request: Request, - accepted_methods: typing.Optional[typing.List[str]] = ["access_token"], + accepted_methods: typing.Optional[typing.List[str]] = ["access_token"], # noqa ) -> typing.Union[RedirectResponse, typing.Dict]: + """Authenticate the caller with the incoming request.""" bearer = request.headers.get("Authorization") if not bearer: logger.exception("Unable to get a token") - raise Oauth2Exception("Auth token not found") + raise Oauth2Error("Auth token not found") access_token = bearer.replace("Bearer ", "") try: claims = await self.decode_token(access_token) if not claims: pass return claims - except: - raise Oauth2Exception("Authentication error") + except Exception: + raise Oauth2Error("Authentication error") # noqa diff --git a/app/auth/exceptions.py b/app/auth/exceptions.py index e1da036..ba06073 100644 --- a/app/auth/exceptions.py +++ b/app/auth/exceptions.py @@ -1,10 +1,13 @@ -class AuthenticationException(Exception): +"""Authentication exceptions module.""" + + +class AuthenticationError(Exception): """This is being raised for exceptions within the auth flow.""" pass -class Oauth2Exception(AuthenticationException): +class Oauth2Error(AuthenticationError): """Oauth2 authentication flow exception.""" pass diff --git a/app/auth/oauth2.py b/app/auth/oauth2.py index 0a653e0..90bce5a 100644 --- a/app/auth/oauth2.py +++ b/app/auth/oauth2.py @@ -1,3 +1,4 @@ +"""OAuth2 provider module.""" import re from abc import ABC from abc import abstractmethod @@ -9,24 +10,34 @@ class Injectable(ABC): - def __init__(self, key: str, skip_endpoints: Optional[List[str]] = []) -> None: + """Define interface for injectables.""" + + def __init__( + self, key: str, skip_endpoints: Optional[List[str]] = [] # noqa B006 + ) -> None: + """Set properties initialization for injectables.""" self.key = key self.skip_endpoints = [re.compile(skip) for skip in skip_endpoints] @abstractmethod async def extract(self, request: Request) -> List: + """Extract the token from the request.""" pass class Oauth2Provider: + """OAuth2 middleware.""" + def __init__( self, authentication: [AuthInterface, List[AuthInterface]], injectables: Optional[List[Injectable]] = None, - accepted_methods: Optional[List[str]] = ["id_token", "access_token"], + accepted_methods: Optional[List[str]] = [ # noqa B006 + "id_token", + "access_token", + ], ) -> None: - """ - Configuration container for the Oauth2Middleware. + """Handle configuration container for the OAuth2 middleware. # noqa D405 PARAMETERS ---------- @@ -39,7 +50,6 @@ def __init__( accepted_methods: List[str], default=["id_token", "access_token"] List of accepted authentication methods. """ - if not isinstance(authentication, list): authentication = [authentication] self.authentication = authentication diff --git a/app/main.py b/app/main.py index 8124874..a125036 100644 --- a/app/main.py +++ b/app/main.py @@ -21,7 +21,9 @@ from fastapi_opa import OPAMiddleware from loguru import logger from mangum import Mangum -from openapi_pydantic.v3.v3_0_3 import SecurityScheme, OAuthFlows, OAuthFlow +from openapi_pydantic.v3.v3_0_3 import OAuthFlow +from openapi_pydantic.v3.v3_0_3 import OAuthFlows +from openapi_pydantic.v3.v3_0_3 import SecurityScheme from pygeoapi.l10n import LocaleError from pygeoapi.openapi import generate_openapi_document from pygeoapi.provider.base import ProviderConnectionError @@ -114,7 +116,7 @@ async def custom_app_exception_handler(request, e): raise e # Add OPAMiddleware to the pygeoapi app - security_scheme = None + security_schemes = [] if cfg.OPA_ENABLED: if cfg.API_KEY_ENABLED or cfg.JWKS_ENABLED: raise ValueError( @@ -124,10 +126,12 @@ async def custom_app_exception_handler(request, e): PYGEOAPI_APP.add_middleware(OPAMiddleware, config=auth_config) - security_schemes = [SecurityScheme( - type="openIdConnect", - openIdConnectUrl=cfg.OIDC_WELL_KNOWN_ENDPOINT, - )] + security_schemes = [ + SecurityScheme( + type="openIdConnect", + openIdConnectUrl=cfg.OIDC_WELL_KNOWN_ENDPOINT, + ) + ] elif cfg.JWKS_ENABLED: if cfg.API_KEY_ENABLED or cfg.OPA_ENABLED: raise ValueError( @@ -143,17 +147,13 @@ async def custom_app_exception_handler(request, e): name="pygeoapi", flows=OAuthFlows( clientCredentials=OAuthFlow( - tokenUrl=cfg.OAUTH2_TOKEN_ENDPOINT, - scopes={} + tokenUrl=cfg.OAUTH2_TOKEN_ENDPOINT, scopes={} ) - ) + ), ), SecurityScheme( - type="http", - name="pygeoapi", - scheme="bearer", - bearerFormat="JWT" - ) + type="http", name="pygeoapi", scheme="bearer", bearerFormat="JWT" + ), ] elif cfg.API_KEY_ENABLED: if cfg.OPA_ENABLED: @@ -168,9 +168,9 @@ async def custom_app_exception_handler(request, e): AuthorizerMiddleware, public_paths=["/openapi"], key_pattern="PYGEOAPI_KEY_" ) - security_schemes = [SecurityScheme( - type="apiKey", name="X-API-KEY", security_scheme_in="header" - )] + security_schemes = [ + SecurityScheme(type="apiKey", name="X-API-KEY", security_scheme_in="header") + ] if security_schemes: PYGEOAPI_APP.add_middleware( diff --git a/app/middleware/oauth2.py b/app/middleware/oauth2.py index 8a30dda..a4c6683 100644 --- a/app/middleware/oauth2.py +++ b/app/middleware/oauth2.py @@ -1,3 +1,4 @@ +"""OAuth2 middleware module.""" import asyncio import re from typing import List @@ -26,6 +27,15 @@ def should_skip_endpoint(endpoint: str, skip_endpoints: List[Pattern]) -> bool: + """Evaluate whether a given endpoint should be skipped. + + Args: + endpoint (str): Endpoint path + skip_endpoints (List[Pattern]): Pattern to skip + + Returns: + bool: Result of the evaluation + """ for skip in skip_endpoints: if skip.match(endpoint): return True @@ -33,16 +43,15 @@ def should_skip_endpoint(endpoint: str, skip_endpoints: List[Pattern]) -> bool: class OwnReceive: - """ - This class is required in order to access the request - body multiple times. - """ + """This class is required in order to access the request body multiple times.""" def __init__(self, receive: Receive): + """Initialize OwnReceive class.""" self.receive = receive self.data = None async def __call__(self): + """Call OwnReceive class.""" if self.data is None: self.data = await self.receive() @@ -50,30 +59,32 @@ async def __call__(self): class Oauth2Middleware: + """OAuth2 security middleware.""" + def __init__( self, app: ASGIApp, config: Oauth2Provider, - skip_endpoints: Optional[List[str]] = [ + skip_endpoints: Optional[List[str]] = [ # noqa B006 "/openapi", "/openapi.json", "/docs", "/redoc", ], ) -> None: + """Initialize OAuth2 authentication middleware.""" self.config = config self.app = app - if cfg.FASTGEOAPI_CONTEXT and not cfg.FASTGEOAPI_CONTEXT in skip_endpoints: + if cfg.FASTGEOAPI_CONTEXT and cfg.FASTGEOAPI_CONTEXT not in skip_endpoints: self.skip_endpoints = [ re.compile(f"{cfg.FASTGEOAPI_CONTEXT}{skip}") for skip in skip_endpoints ] else: - self.skip_endpoints = [ - re.compile(skip) for skip in skip_endpoints - ] + self.skip_endpoints = [re.compile(skip) for skip in skip_endpoints] logger.debug(f"Compiled skippable endpoints: {self.skip_endpoints}") async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: + """Call the OAuth2 middleware.""" if scope["type"] == "lifespan": return await self.app(scope, receive, send) @@ -106,7 +117,7 @@ async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: successful = True break except Oauth2Exception as e: - logger.error("Authentication Exception raised on login") + logger.error(f"Authentication Exception raised on login \n{e}") # Some authentication flows require a prior redirect to id provider if isinstance(user_info_or_auth_redirect, RedirectResponse): @@ -120,5 +131,6 @@ async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: async def get_unauthorized_response( scope: Scope, receive: Receive, send: Send ) -> None: + """Prepare response for unauthorized access.""" response = JSONResponse(status_code=401, content={"message": "Unauthenticated"}) return await response(scope, receive, send) diff --git a/app/middleware/pygeoapi.py b/app/middleware/pygeoapi.py index f6de1a9..881c37d 100644 --- a/app/middleware/pygeoapi.py +++ b/app/middleware/pygeoapi.py @@ -3,6 +3,8 @@ from typing import Dict from typing import List +from app.config.app import configuration as cfg +from app.config.logging import create_logger from openapi_pydantic.v3.v3_0_3 import OpenAPI from openapi_pydantic.v3.v3_0_3 import SecurityScheme from pydantic_core import ValidationError @@ -14,9 +16,6 @@ from starlette.types import Scope from starlette.types import Send -from app.config.app import configuration as cfg -from app.config.logging import create_logger - logger = create_logger("app.middleware.pygeoapi") @@ -93,19 +92,15 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 security_scheme.type for security_scheme in self.security_schemes ] if all( - item in [ - "http", "apiKey", "oauth2", "openIdConnect" - ] for item in security_scheme_types + item in ["http", "apiKey", "oauth2", "openIdConnect"] + for item in security_scheme_types ): - security_schemes = { - "securitySchemes": { - } - } + security_schemes = {"securitySchemes": {}} dumped_schemes = {} for scheme in self.security_schemes: dumped_schemes.update( { - f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": scheme.model_dump( + f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": scheme.model_dump( # noqa B950 by_alias=True, exclude_none=True ) } @@ -121,9 +116,13 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 secured_paths = {} for key, value in paths.items(): if value.get: - value.get.security = [{f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []}] + value.get.security = [ + {f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []} + ] if value.post: - value.post.security = [{f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []}] + value.post.security = [ + {f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []} + ] secured_paths.update({key: value}) if secured_paths: body["paths"] = secured_paths diff --git a/scripts/docker/build.py b/scripts/docker/build.py index 693967e..83499d8 100644 --- a/scripts/docker/build.py +++ b/scripts/docker/build.py @@ -80,7 +80,7 @@ def main( build_command = ( f"{docker_command} buildx build " f"--platform {docker_platform} " - f"--tag '{base_image_name}:{_sanitize_git_branch_name(current_git_branch)}' " + f"--tag '{base_image_name}:{_sanitize_git_branch_name(current_git_branch)}' " # noqa B950 f"--tag '{base_image_name}:{current_git_commit}' " f"--file {Path(__file__).parent.parent.parent / 'Dockerfile'} " f"--label git-commit={current_git_commit} " From 95cf5ae2e004966114c6599f938c2c3f709a34a5 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Sun, 28 Jan 2024 13:27:10 +0100 Subject: [PATCH 18/33] Update dependencies --- .gitignore | 1 + poetry.lock | 803 ++++++++++++++++++++++++------------------------- pyproject.toml | 7 +- 3 files changed, 390 insertions(+), 421 deletions(-) diff --git a/.gitignore b/.gitignore index 020a666..b523796 100644 --- a/.gitignore +++ b/.gitignore @@ -130,3 +130,4 @@ dmypy.json # OS .DS_Store +.aider* diff --git a/poetry.lock b/poetry.lock index d2b79d7..072e166 100644 --- a/poetry.lock +++ b/poetry.lock @@ -129,24 +129,24 @@ dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"] [[package]] name = "bandit" -version = "1.7.6" +version = "1.7.7" description = "Security oriented static analyser for python code." optional = false python-versions = ">=3.8" files = [ - {file = "bandit-1.7.6-py3-none-any.whl", hash = "sha256:36da17c67fc87579a5d20c323c8d0b1643a890a2b93f00b3d1229966624694ff"}, - {file = "bandit-1.7.6.tar.gz", hash = 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lock-version = "2.0" python-versions = ">=3.9,<4.0" -content-hash = "a2bb231921e645ba7f7c040a99ffc2cc464c561650a101c4ec98073b692ecac1" +content-hash = "dddc6222accb7a4dfe79dc14e1f2cec4411b08c4a8ca69e174bd5e831930a9f4" diff --git a/pyproject.toml b/pyproject.toml index 29202df..11b27e9 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -25,20 +25,19 @@ python = ">=3.9,<4.0" mangum = "^0.14.1" loguru = "^0.7.2" jinja2 = "3.0.3" -fastapi-opa = "^1.4.7" +fastapi-opa = "^1.4.8" rasterio = "1.3.9" # fix https://github.com/rasterio/rasterio/issues/2333 pygeoapi = {git = "https://github.com/geopython/pygeoapi", rev = "master"} uvicorn = {extras = ["standard"], version = "^0.25.0"} fastapi = {extras = ["all"], version = "^0.108"} typer = {extras = ["all"], version = "^0.9.0"} -nest-asyncio = "^1.5.6" fastapi-key-auth = "^0.12.0" sqlalchemy = "^1.4.50" geoalchemy2 = "^0.12.5" shapely = "<2.0" psycopg2 = "^2.9.7" openapi-pydantic = "^0.4.0" -pygeofilter = {extras = ["backend-sqlalchemy"], version = "^0.2.1"} +pygeofilter = {git = "https://github.com/geopython/pygeofilter", rev = "main"} pydantic-settings = "^2.1.0" authlib = "^1.3.0" cachetools = "^5.3.2" @@ -64,7 +63,7 @@ reorder-python-imports = "^3.9.0" pre-commit-hooks = "^4.0.1" pyupgrade = "^3.3.1" mkdocs = "^1.3.0" -mkdocs-material = "^9.2.1" +mkdocs-material = "^9.5.6" mkdocs-material-extras = "^0.0.8" mkdocs-material-extensions = "^1.1.1" bandit = "^1.7.5" From acb0b1281b1d5881fb76b698446d0a55756582fa Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Sun, 28 Jan 2024 16:42:13 +0100 Subject: [PATCH 19/33] Fix mypy errors Fix mypy errors Fix mypy errors --- app/auth/oauth2.py | 6 ++++-- app/middleware/oauth2.py | 23 ++++++++++------------- app/middleware/pygeoapi.py | 2 +- 3 files changed, 15 insertions(+), 16 deletions(-) diff --git a/app/auth/oauth2.py b/app/auth/oauth2.py index 90bce5a..690122c 100644 --- a/app/auth/oauth2.py +++ b/app/auth/oauth2.py @@ -17,7 +17,9 @@ def __init__( ) -> None: """Set properties initialization for injectables.""" self.key = key - self.skip_endpoints = [re.compile(skip) for skip in skip_endpoints] + self.skip_endpoints = [ + re.compile(skip) for skip in skip_endpoints # type:ignore + ] @abstractmethod async def extract(self, request: Request) -> List: @@ -30,7 +32,7 @@ class Oauth2Provider: def __init__( self, - authentication: [AuthInterface, List[AuthInterface]], + authentication: [AuthInterface, List[AuthInterface]], # type:ignore injectables: Optional[List[Injectable]] = None, accepted_methods: Optional[List[str]] = [ # noqa B006 "id_token", diff --git a/app/middleware/oauth2.py b/app/middleware/oauth2.py index a4c6683..5add409 100644 --- a/app/middleware/oauth2.py +++ b/app/middleware/oauth2.py @@ -4,7 +4,7 @@ from typing import List from typing import Optional -from app.auth.exceptions import Oauth2Exception +from app.auth.exceptions import Oauth2Error from app.auth.oauth2 import Oauth2Provider from app.config.app import configuration as cfg from app.config.logging import create_logger @@ -16,22 +16,16 @@ from starlette.types import Scope from starlette.types import Send -try: - Pattern = re.Pattern -except AttributeError: - # Python3.6 does not contain re.Pattern - Pattern = None - logger = create_logger("app.middleware.oauth2") -def should_skip_endpoint(endpoint: str, skip_endpoints: List[Pattern]) -> bool: +def should_skip_endpoint(endpoint: str, skip_endpoints: List[re.Pattern]) -> bool: """Evaluate whether a given endpoint should be skipped. Args: endpoint (str): Endpoint path - skip_endpoints (List[Pattern]): Pattern to skip + skip_endpoints (List[re.Pattern]): Pattern to skip Returns: bool: Result of the evaluation @@ -75,12 +69,15 @@ def __init__( """Initialize OAuth2 authentication middleware.""" self.config = config self.app = app - if cfg.FASTGEOAPI_CONTEXT and cfg.FASTGEOAPI_CONTEXT not in skip_endpoints: + if cfg.FASTGEOAPI_CONTEXT not in skip_endpoints: # type:ignore self.skip_endpoints = [ - re.compile(f"{cfg.FASTGEOAPI_CONTEXT}{skip}") for skip in skip_endpoints + re.compile(f"{cfg.FASTGEOAPI_CONTEXT}{skip}") # type:ignore + for skip in skip_endpoints # type:ignore ] else: - self.skip_endpoints = [re.compile(skip) for skip in skip_endpoints] + self.skip_endpoints = [ + re.compile(skip) for skip in skip_endpoints # type:ignore + ] logger.debug(f"Compiled skippable endpoints: {self.skip_endpoints}") async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: @@ -116,7 +113,7 @@ async def __call__(self, scope: Scope, receive: Receive, send: Send) -> None: if isinstance(user_info_or_auth_redirect, dict): successful = True break - except Oauth2Exception as e: + except Oauth2Error as e: logger.error(f"Authentication Exception raised on login \n{e}") # Some authentication flows require a prior redirect to id provider diff --git a/app/middleware/pygeoapi.py b/app/middleware/pygeoapi.py index 881c37d..53d9376 100644 --- a/app/middleware/pygeoapi.py +++ b/app/middleware/pygeoapi.py @@ -95,7 +95,7 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 item in ["http", "apiKey", "oauth2", "openIdConnect"] for item in security_scheme_types ): - security_schemes = {"securitySchemes": {}} + security_schemes = {"securitySchemes": {}} # type: dict[str, dict] dumped_schemes = {} for scheme in self.security_schemes: dumped_schemes.update( From 3554bf6b88c52791df79e736f7b462327207fb10 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Wed, 31 Jan 2024 23:55:17 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"more-itertools", "p [metadata] lock-version = "2.0" python-versions = ">=3.9,<4.0" -content-hash = "dddc6222accb7a4dfe79dc14e1f2cec4411b08c4a8ca69e174bd5e831930a9f4" +content-hash = "8cecf62e826b2447f31f7ccf6a7b18f249f7f58ee7e555f65301e46a961bfa45" diff --git a/pyproject.toml b/pyproject.toml index 11b27e9..0e1576e 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -24,7 +24,7 @@ Changelog = "https://github.com/geobeyond/fastgeoapi/releases" python = ">=3.9,<4.0" mangum = "^0.14.1" loguru = "^0.7.2" -jinja2 = "3.0.3" +jinja2 = "3.1.3" fastapi-opa = "^1.4.8" rasterio = "1.3.9" # fix https://github.com/rasterio/rasterio/issues/2333 pygeoapi = {git = "https://github.com/geopython/pygeoapi", rev = "master"} From 0257cffd83fbb6055bdd920fef3fc9d4e862a075 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Sun, 4 Feb 2024 15:37:40 +0100 Subject: [PATCH 22/33] style(Config): Make pyright happy --- app/config/app.py | 164 +++++++++++++++++++++++----------------------- 1 file changed, 82 insertions(+), 82 deletions(-) diff --git a/app/config/app.py b/app/config/app.py index 6f7de00..7c2173f 100644 --- a/app/config/app.py +++ b/app/config/app.py @@ -31,69 +31,69 @@ class DevConfig(GlobalConfig): ROOT_PATH: Optional[str] = pydantic.Field(None, env="DEV_ROOT_PATH") # type: ignore AWS_LAMBDA_DEPLOY: Optional[bool] = pydantic.Field( - None, env="DEV_AWS_LAMBDA_DEPLOY" - ) # type: ignore + None, env="DEV_AWS_LAMBDA_DEPLOY" # type: ignore + ) LOG_PATH: Optional[str] = pydantic.Field(None, env="DEV_LOG_PATH") # type: ignore LOG_FILENAME: Optional[str] = pydantic.Field( - None, env="DEV_LOG_FILENAME" - ) # type: ignore + None, env="DEV_LOG_FILENAME" # type: ignore + ) LOG_LEVEL: Optional[str] = pydantic.Field(None, env="DEV_LOG_LEVEL") # type: ignore LOG_ENQUEUE: Optional[bool] = pydantic.Field( - None, env="DEV_LOG_ENQUEUE" - ) # type: ignore + None, env="DEV_LOG_ENQUEUE" # type: ignore + ) LOG_ROTATION: Optional[str] = pydantic.Field( - None, env="DEV_LOG_ROTATION" - ) # type: ignore + None, env="DEV_LOG_ROTATION" # type: ignore + ) LOG_RETENTION: Optional[str] = pydantic.Field( - None, env="DEV_LOG_RETENTION" - ) # type: ignore + None, env="DEV_LOG_RETENTION" # type: ignore + ) LOG_FORMAT: Optional[str] = pydantic.Field( - None, env="DEV_LOG_FORMAT" - ) # type: ignore + None, env="DEV_LOG_FORMAT" # type: ignore + ) OPA_ENABLED: Optional[bool] = pydantic.Field( - None, env="DEV_OPA_ENABLED" - ) # type: ignore + None, env="DEV_OPA_ENABLED" # type: ignore + ) OPA_URL: Optional[str] = pydantic.Field(None, env="DEV_OPA_URL") # type: ignore APP_URI: Optional[str] = pydantic.Field(None, env="DEV_APP_URI") # type: ignore OIDC_WELL_KNOWN_ENDPOINT: Optional[str] = pydantic.Field( - None, env="DEV_OIDC_WELL_KNOWN_ENDPOINT" - ) # type: ignore + None, env="DEV_OIDC_WELL_KNOWN_ENDPOINT" # type: ignore + ) OIDC_CLIENT_ID: Optional[str] = pydantic.Field( - None, env="DEV_OIDC_CLIENT_ID" - ) # type: ignore + None, env="DEV_OIDC_CLIENT_ID" # type: ignore + ) OIDC_CLIENT_SECRET: Optional[str] = pydantic.Field( - None, env="DEV_OIDC_CLIENT_SECRET" - ) # type: ignore + None, env="DEV_OIDC_CLIENT_SECRET" # type: ignore + ) API_KEY_ENABLED: Optional[bool] = pydantic.Field( - None, env="DEV_API_KEY_ENABLED" - ) # type: ignore + None, env="DEV_API_KEY_ENABLED" # type: ignore + ) JWKS_ENABLED: Optional[bool] = pydantic.Field( - None, env="DEV_JWKS_ENABLED" - ) # type: ignore + None, env="DEV_JWKS_ENABLED" # type: ignore + ) OAUTH2_JWKS_ENDPOINT: Optional[str] = pydantic.Field( - None, env="DEV_OAUTH2_JWKS_ENDPOINT" - ) # type: ignore + None, env="DEV_OAUTH2_JWKS_ENDPOINT" # type: ignore + ) OAUTH2_TOKEN_ENDPOINT: Optional[str] = pydantic.Field( - None, env="DEV_OAUTH2_TOKEN_ENDPOINT" - ) # type: ignore + None, env="DEV_OAUTH2_TOKEN_ENDPOINT" # type: ignore + ) PYGEOAPI_KEY_GLOBAL: Optional[str] = pydantic.Field( - None, env="DEV_PYGEOAPI_KEY_GLOBAL" - ) # type: ignore + None, env="DEV_PYGEOAPI_KEY_GLOBAL" # type: ignore + ) PYGEOAPI_BASEURL: Optional[str] = pydantic.Field( - None, env="DEV_PYGEOAPI_BASEURL" - ) # type: ignore + None, env="DEV_PYGEOAPI_BASEURL" # type: ignore + ) PYGEOAPI_CONFIG: Optional[str] = pydantic.Field( - None, env="DEV_PYGEOAPI_CONFIG" - ) # type: ignore + None, env="DEV_PYGEOAPI_CONFIG" # type: ignore + ) PYGEOAPI_OPENAPI: Optional[str] = pydantic.Field( - None, env="DEV_PYGEOAPI_OPENAPI" - ) # type: ignore + None, env="DEV_PYGEOAPI_OPENAPI" # type: ignore + ) PYGEOAPI_SECURITY_SCHEME: Optional[str] = pydantic.Field( - None, env="DEV_PYGEOAPI_SECURITY_SCHEME" - ) # type: ignore + None, env="DEV_PYGEOAPI_SECURITY_SCHEME" # type: ignore + ) FASTGEOAPI_CONTEXT: Optional[str] = pydantic.Field( - None, env="DEV_FASTGEOAPI_CONTEXT" - ) # type: ignore + None, env="DEV_FASTGEOAPI_CONTEXT" # type: ignore + ) model_config = SettingsConfigDict(env_prefix="DEV_") @@ -102,71 +102,71 @@ class ProdConfig(GlobalConfig): """Production configurations.""" ROOT_PATH: Optional[str] = pydantic.Field( - None, env="PROD_ROOT_PATH" - ) # type: ignore + None, env="PROD_ROOT_PATH" # type: ignore + ) AWS_LAMBDA_DEPLOY: Optional[bool] = pydantic.Field( - None, env="PROD_AWS_LAMBDA_DEPLOY" - ) # type: ignore + None, env="PROD_AWS_LAMBDA_DEPLOY" # type: ignore + ) LOG_PATH: Optional[str] = pydantic.Field(None, env="PROD_LOG_PATH") # type: ignore LOG_FILENAME: Optional[str] = pydantic.Field( - None, env="PROD_LOG_FILENAME" - ) # type: ignore + None, env="PROD_LOG_FILENAME" # type: ignore + ) LOG_LEVEL: Optional[str] = pydantic.Field( - None, env="PROD_LOG_LEVEL" - ) # type: ignore + None, env="PROD_LOG_LEVEL" # type: ignore + ) LOG_ENQUEUE: Optional[bool] = pydantic.Field( - None, env="PROD_LOG_ENQUEUE" - ) # type: ignore + None, env="PROD_LOG_ENQUEUE" # type: ignore + ) LOG_ROTATION: Optional[str] = pydantic.Field( - None, env="PROD_LOG_ROTATION" - ) # type: ignore + None, env="PROD_LOG_ROTATION" # type: ignore + ) LOG_RETENTION: Optional[str] = pydantic.Field( - None, env="PROD_LOG_RETENTION" - ) # type: ignore + None, env="PROD_LOG_RETENTION" # type: ignore + ) LOG_FORMAT: Optional[str] = pydantic.Field( - None, env="PROD_LOG_FORMAT" - ) # type: ignore + None, env="PROD_LOG_FORMAT" # type: ignore + ) OPA_ENABLED: Optional[bool] = pydantic.Field( - None, env="PROD_OPA_ENABLED" - ) # type: ignore + None, env="PROD_OPA_ENABLED" # type: ignore + ) OPA_URL: Optional[str] = pydantic.Field(None, env="PROD_OPA_URL") # type: ignore APP_URI: Optional[str] = pydantic.Field(None, env="PROD_APP_URI") # type: ignore OIDC_WELL_KNOWN_ENDPOINT: Optional[str] = pydantic.Field( - None, env="PROD_OIDC_WELL_KNOWN_ENDPOINT" - ) # type: ignore + None, env="PROD_OIDC_WELL_KNOWN_ENDPOINT" # type: ignore + ) OIDC_CLIENT_ID: Optional[str] = pydantic.Field( - None, env="PROD_OIDC_CLIENT_ID" - ) # type: ignore + None, env="PROD_OIDC_CLIENT_ID" # type: ignore + ) OIDC_CLIENT_SECRET: Optional[str] = pydantic.Field( - None, env="PROD_OIDC_CLIENT_SECRET" - ) # type: ignore + None, env="PROD_OIDC_CLIENT_SECRET" # type: ignore + ) API_KEY_ENABLED: Optional[bool] = pydantic.Field( - None, env="PROD_API_KEY_ENABLED" - ) # type: ignore + None, env="PROD_API_KEY_ENABLED" # type: ignore + ) OAUTH2_JWKS_ENDPOINT: Optional[str] = pydantic.Field( - None, env="PROD_OAUTH2_JWKS_ENDPOINT" - ) # type: ignore + None, env="PROD_OAUTH2_JWKS_ENDPOINT" # type: ignore + ) OAUTH2_TOKEN_ENDPOINT: Optional[str] = pydantic.Field( - None, env="PROD_OAUTH2_TOKEN_ENDPOINT" - ) # type: ignore + None, env="PROD_OAUTH2_TOKEN_ENDPOINT" # type: ignore + ) PYGEOAPI_KEY_GLOBAL: Optional[str] = pydantic.Field( - None, env="PROD_PYGEOAPI_KEY_GLOBAL" - ) # type: ignore + None, env="PROD_PYGEOAPI_KEY_GLOBAL" # type: ignore + ) PYGEOAPI_BASEURL: Optional[str] = pydantic.Field( - None, env="PROD_PYGEOAPI_BASEURL" - ) # type: ignore + None, env="PROD_PYGEOAPI_BASEURL" # type: ignore + ) PYGEOAPI_CONFIG: Optional[str] = pydantic.Field( - None, env="PROD_PYGEOAPI_CONFIG" - ) # type: ignore + None, env="PROD_PYGEOAPI_CONFIG" # type: ignore + ) PYGEOAPI_OPENAPI: Optional[str] = pydantic.Field( - None, env="PROD_PYGEOAPI_OPENAPI" - ) # type: ignore + None, env="PROD_PYGEOAPI_OPENAPI" # type: ignore + ) PYGEOAPI_SECURITY_SCHEME: Optional[str] = pydantic.Field( - None, env="PROD_PYGEOAPI_SECURITY_SCHEME" - ) # type: ignore + None, env="PROD_PYGEOAPI_SECURITY_SCHEME" # type: ignore + ) FASTGEOAPI_CONTEXT: Optional[str] = pydantic.Field( - None, env="PROD_FASTGEOAPI_CONTEXT" - ) # type: ignore + None, env="PROD_FASTGEOAPI_CONTEXT" # type: ignore + ) model_config = SettingsConfigDict(env_prefix="PROD_") From fc386169fa3603f7b884a819f0a5a37ddbbbd976 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Sun, 4 Feb 2024 17:49:12 +0100 Subject: [PATCH 23/33] Add openapi module for pygeoapi override --- app/main.py | 5 ++-- app/middleware/pygeoapi.py | 56 ++++---------------------------------- app/pygeoapi/__init__.py | 1 + app/pygeoapi/openapi.py | 56 ++++++++++++++++++++++++++++++++++++++ cli.py | 3 +- 5 files changed, 68 insertions(+), 53 deletions(-) create mode 100644 app/pygeoapi/__init__.py create mode 100644 app/pygeoapi/openapi.py diff --git a/app/main.py b/app/main.py index a125036..a1c7200 100644 --- a/app/main.py +++ b/app/main.py @@ -24,11 +24,12 @@ from openapi_pydantic.v3.v3_0_3 import OAuthFlow from openapi_pydantic.v3.v3_0_3 import OAuthFlows from openapi_pydantic.v3.v3_0_3 import SecurityScheme +from starlette.exceptions import HTTPException as StarletteHTTPException +from starlette.middleware.cors import CORSMiddleware + from pygeoapi.l10n import LocaleError from pygeoapi.openapi import generate_openapi_document from pygeoapi.provider.base import ProviderConnectionError -from starlette.exceptions import HTTPException as StarletteHTTPException -from starlette.middleware.cors import CORSMiddleware if cfg.LOG_LEVEL == "debug": diff --git a/app/middleware/pygeoapi.py b/app/middleware/pygeoapi.py index 53d9376..9d0e25b 100644 --- a/app/middleware/pygeoapi.py +++ b/app/middleware/pygeoapi.py @@ -3,11 +3,9 @@ from typing import Dict from typing import List -from app.config.app import configuration as cfg from app.config.logging import create_logger -from openapi_pydantic.v3.v3_0_3 import OpenAPI +from app.pygeoapi.openapi import augment_security from openapi_pydantic.v3.v3_0_3 import SecurityScheme -from pydantic_core import ValidationError from starlette.datastructures import Headers from starlette.datastructures import MutableHeaders from starlette.types import ASGIApp @@ -83,54 +81,12 @@ async def send_with_security(self, message: Message) -> None: # noqa: C901 self.headers.update(headers_dict) if message_type == "http.response.body": initial_body = message.get("body", b"").decode() - try: - openapi = OpenAPI.model_validate_json(initial_body) - except ValidationError as e: - logger.error(e) - raise - security_scheme_types = [ - security_scheme.type for security_scheme in self.security_schemes - ] - if all( - item in ["http", "apiKey", "oauth2", "openIdConnect"] - for item in security_scheme_types - ): - security_schemes = {"securitySchemes": {}} # type: dict[str, dict] - dumped_schemes = {} - for scheme in self.security_schemes: - dumped_schemes.update( - { - f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": scheme.model_dump( # noqa B950 - by_alias=True, exclude_none=True - ) - } - ) - security_schemes["securitySchemes"] = dumped_schemes - body = openapi.model_dump(by_alias=True, exclude_none=True) - components = body.get("components") - if components: - components.update(security_schemes) - body["components"] = components - paths = openapi.paths - if paths: - secured_paths = {} - for key, value in paths.items(): - if value.get: - value.get.security = [ - {f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []} - ] - if value.post: - value.post.security = [ - {f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []} - ] - secured_paths.update({key: value}) - if secured_paths: - body["paths"] = secured_paths - binary_body = ( - OpenAPI(**body) - .model_dump_json(by_alias=True, exclude_none=True, indent=2) - .encode() + openapi_body = augment_security( + doc=initial_body, security_schemes=self.security_schemes ) + binary_body = openapi_body.model_dump_json( + by_alias=True, exclude_none=True, indent=2 + ).encode() headers = MutableHeaders(raw=self.initial_message["headers"]) headers["Content-Length"] = str(len(binary_body)) message["body"] = binary_body diff --git a/app/pygeoapi/__init__.py b/app/pygeoapi/__init__.py new file mode 100644 index 0000000..33fa38a --- /dev/null +++ b/app/pygeoapi/__init__.py @@ -0,0 +1 @@ +"""pygeoapi package.""" diff --git a/app/pygeoapi/openapi.py b/app/pygeoapi/openapi.py new file mode 100644 index 0000000..ed53fe7 --- /dev/null +++ b/app/pygeoapi/openapi.py @@ -0,0 +1,56 @@ +"""Override vanilla openapi module.""" +from typing import Dict +from typing import List + +from app.config.app import configuration as cfg +from app.config.logging import create_logger +from openapi_pydantic.v3.v3_0_3 import OpenAPI +from openapi_pydantic.v3.v3_0_3 import SecurityScheme +from pydantic_core import ValidationError + + +logger = create_logger("app.pygeoapi.openapi") + + +def augment_security(doc: Dict, security_schemes: List[SecurityScheme]) -> OpenAPI: + """Augment openapi document with security sections.""" + try: + openapi = OpenAPI.model_validate_json(doc) + except ValidationError as e: + logger.error(e) + raise + security_scheme_types = [ + security_scheme.type for security_scheme in security_schemes + ] + _security_schemes = {"securitySchemes": {}} # type: dict[str, dict] + if all( + item in ["http", "apiKey", "oauth2", "openIdConnect"] + for item in security_scheme_types + ): + dumped_schemes = {} + for scheme in security_schemes: + dumped_schemes.update( + { + f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": scheme.model_dump( # noqa B950 + by_alias=True, exclude_none=True + ) + } + ) + _security_schemes["securitySchemes"] = dumped_schemes + content = openapi.model_dump(by_alias=True, exclude_none=True) + components = content.get("components") + if components: + components.update(_security_schemes) + content["components"] = components + paths = openapi.paths + secured_paths = {} + if paths: + for key, value in paths.items(): + if value.get: + value.get.security = [{f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []}] + if value.post: + value.post.security = [{f"pygeoapi {cfg.PYGEOAPI_SECURITY_SCHEME}": []}] + secured_paths.update({key: value}) + if secured_paths: + content["paths"] = secured_paths + return OpenAPI(**content) diff --git a/cli.py b/cli.py index 300b208..47d6eed 100644 --- a/cli.py +++ b/cli.py @@ -9,10 +9,11 @@ from loguru import logger from openapi_pydantic.v3.v3_0_3 import OpenAPI from openapi_pydantic.v3.v3_0_3 import SecurityScheme +from rich.console import Console + from pygeoapi.l10n import LocaleError from pygeoapi.openapi import generate_openapi_document from pygeoapi.provider.base import ProviderConnectionError -from rich.console import Console err_console = Console(stderr=True) From 9f80d125080eed147fd36afcd866bb9ca9ec879d Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Sun, 4 Feb 2024 17:56:24 +0100 Subject: [PATCH 24/33] Fix mypy --- app/pygeoapi/openapi.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/app/pygeoapi/openapi.py b/app/pygeoapi/openapi.py index ed53fe7..63cac04 100644 --- a/app/pygeoapi/openapi.py +++ b/app/pygeoapi/openapi.py @@ -12,7 +12,7 @@ logger = create_logger("app.pygeoapi.openapi") -def augment_security(doc: Dict, security_schemes: List[SecurityScheme]) -> OpenAPI: +def augment_security(doc: str, security_schemes: List[SecurityScheme]) -> OpenAPI: """Augment openapi document with security sections.""" try: openapi = OpenAPI.model_validate_json(doc) From 6b47ab61d81ee52d04965144dd1e8af7b775bb01 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Mon, 5 Feb 2024 00:03:20 +0100 Subject: [PATCH 25/33] style(openapi.py): Fix flake8 --- app/pygeoapi/openapi.py | 1 - 1 file changed, 1 deletion(-) diff --git a/app/pygeoapi/openapi.py b/app/pygeoapi/openapi.py index 63cac04..1c92793 100644 --- a/app/pygeoapi/openapi.py +++ b/app/pygeoapi/openapi.py @@ -1,5 +1,4 @@ """Override vanilla openapi module.""" -from typing import Dict from typing import List from app.config.app import configuration as cfg From 11e2799c27e8b2fbb44df914213ea270174b0382 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Sat, 10 Feb 2024 23:51:59 +0100 Subject: [PATCH 26/33] fix(cli): Fix openapi generation --- .gitignore | 2 + cli.py | 99 ++++---- poetry.lock | 656 ++++++++++++++++++++++++------------------------- pyproject.toml | 29 +-- 4 files changed, 388 insertions(+), 398 deletions(-) diff --git a/.gitignore b/.gitignore index b523796..925ac7d 100644 --- a/.gitignore +++ b/.gitignore @@ -131,3 +131,5 @@ dmypy.json # OS .DS_Store .aider* + +pygeoapi-openapi.json diff --git a/cli.py b/cli.py index 47d6eed..c416118 100644 --- a/cli.py +++ b/cli.py @@ -4,10 +4,11 @@ import typer from app.config.app import configuration as cfg +from app.pygeoapi.openapi import augment_security from app.utils.pygeoapi_exceptions import PygeoapiEnvError from app.utils.pygeoapi_exceptions import PygeoapiLanguageError -from loguru import logger -from openapi_pydantic.v3.v3_0_3 import OpenAPI +from openapi_pydantic.v3.v3_0_3 import OAuthFlow +from openapi_pydantic.v3.v3_0_3 import OAuthFlows from openapi_pydantic.v3.v3_0_3 import SecurityScheme from rich.console import Console @@ -16,7 +17,8 @@ from pygeoapi.provider.base import ProviderConnectionError -err_console = Console(stderr=True) +log_console = Console() +err_console = Console(stderr=True, style="bold red") app = typer.Typer() @@ -35,7 +37,7 @@ def openapi(ctx: typer.Context) -> None: os.environ["PYGEOAPI_OPENAPI"] = cfg.PYGEOAPI_OPENAPI os.environ["PYGEOAPI_BASEURL"] = cfg.PYGEOAPI_BASEURL if not (os.environ["PYGEOAPI_CONFIG"] and os.environ["PYGEOAPI_OPENAPI"]): - logger.error("pygeoapi variables are not configured") + err_console.log("pygeoapi variables are not configured") raise PygeoapiEnvError("PYGEOAPI_CONFIG and PYGEOAPI_OPENAPI are not set") else: # fill pygeoapi configuration with fastapi host and port @@ -49,18 +51,41 @@ def openapi(ctx: typer.Context) -> None: pygeoapi_conf, output_format="json", ) - logger.debug(f"OpenAPI content: \n{oapi_content}") - security_scheme = None + log_console.log(f"OpenAPI content: {oapi_content}") + security_schemes = [] if cfg.OPA_ENABLED: - if cfg.API_KEY_ENABLED: + if cfg.API_KEY_ENABLED or cfg.JWKS_ENABLED: raise ValueError( - "OPA_ENABLED and API_KEY_ENABLED are mutually exclusive" + "OPA_ENABLED, JWKS_ENABLED and API_KEY_ENABLED are mutually exclusive" # noqa + ) + security_schemes = [ + SecurityScheme( + type="openIdConnect", + openIdConnectUrl=cfg.OIDC_WELL_KNOWN_ENDPOINT, + ) + ] + elif cfg.JWKS_ENABLED: + if cfg.API_KEY_ENABLED or cfg.OPA_ENABLED: + raise ValueError( + "OPA_ENABLED, JWKS_ENABLED and API_KEY_ENABLED are mutually exclusive" # noqa ) - security_scheme = SecurityScheme( - type="openIdConnect", - name="OIDC", - openIdConnectUrl=cfg.OIDC_WELL_KNOWN_ENDPOINT, - ) + security_schemes = [ + SecurityScheme( + type="oauth2", + name="pygeoapi", + flows=OAuthFlows( + clientCredentials=OAuthFlow( + tokenUrl=cfg.OAUTH2_TOKEN_ENDPOINT, scopes={} + ) + ), + ), + SecurityScheme( + type="http", + name="pygeoapi", + scheme="bearer", + bearerFormat="JWT", + ), + ] elif cfg.API_KEY_ENABLED: if cfg.OPA_ENABLED: raise ValueError( @@ -69,42 +94,30 @@ def openapi(ctx: typer.Context) -> None: if not cfg.PYGEOAPI_KEY_GLOBAL: raise ValueError("pygeoapi API KEY is missing") os.environ["PYGEOAPI_KEY_GLOBAL"] = cfg.PYGEOAPI_KEY_GLOBAL - security_scheme = SecurityScheme( - type="apiKey", name="X-API-KEY", security_scheme_in="header" - ) - openapi = OpenAPI.model_validate_json(oapi_content) - if security_scheme: - dict_openapi = openapi.model_dump(by_alias=True, exclude_none=True) - components = dict_openapi.get("components") - if components: - components.update(security_scheme) - paths = openapi.paths - if paths: - secured_paths = {} - for key, value in paths.items(): - if value.get: - value.get.security = [{"PygeoApiKey": []}] - if value.post: - value.post.security = [{"PygeoApiKey": []}] - secured_paths.update({key: value}) - if secured_paths: - dict_openapi["paths"] = secured_paths - enriched_openapi = OpenAPI(**dict_openapi) - else: - enriched_openapi = openapi - oapi_file.write(enriched_openapi.model_dump_json()) + security_schemes = [ + SecurityScheme( + type="apiKey", name="X-API-KEY", security_scheme_in="header" + ) + ] + enriched_openapi = augment_security( + doc=oapi_content, security_schemes=security_schemes + ) + openapi_string = enriched_openapi.model_dump_json( + by_alias=True, exclude_none=True, indent=2 + ) + oapi_file.write(openapi_string) except FileNotFoundError: - logger.error("Please configure pygeoapi settings in .env properly") + err_console.log("Please configure pygeoapi settings in .env properly") raise except OSError as e: - logger.error(f"Runtime environment variables: \n{cfg}") + err_console.log(f"Runtime environment variables: \n{cfg}") raise PygeoapiEnvError from e except LocaleError as e: - logger.error(f"Runtime language configuration: \n{oapi_content}") + err_console.log(f"Runtime language configuration: \n{oapi_content}") raise PygeoapiLanguageError from e except ProviderConnectionError as e: - logger.error(f"Runtime environment variables: \n{cfg}") - logger.error(f"pygeoapi configuration: \n{pygeoapi_conf}") - logger.error(e) + err_console.log(f"Runtime environment variables: \n{cfg}") + err_console.log(f"pygeoapi configuration: \n{pygeoapi_conf}") + err_console.log(e) raise e diff --git a/poetry.lock b/poetry.lock index 16540da..135d670 100644 --- a/poetry.lock +++ b/poetry.lock @@ -48,6 +48,17 @@ doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphin test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"] trio = ["trio (>=0.23)"] +[[package]] +name = "appnope" +version = "0.1.4" +description = "Disable App Nap on macOS >= 10.9" +optional = false +python-versions = ">=3.6" +files = [ + {file = "appnope-0.1.4-py2.py3-none-any.whl", hash = "sha256:502575ee11cd7a28c0205f379b525beefebab9d161b7c964670864014ed7213c"}, + {file = "appnope-0.1.4.tar.gz", hash = "sha256:1de3860566df9caf38f01f86f65e0e13e379af54f9e4bee1e66b48f2efffd1ee"}, +] + [[package]] name = "argcomplete" version = "3.2.2" @@ -127,6 +138,17 @@ files = [ [package.extras] dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"] +[[package]] +name = "backcall" +version = "0.2.0" +description = "Specifications for callback functions passed in to an API" +optional = false +python-versions = "*" 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"https://github.com/geobeyond/fastgeoapi" documentation = "https://fastgeoapi.readthedocs.io" -classifiers = [ - "Development Status :: 1 - Planning", -] +classifiers = ["Development Status :: 1 - Planning"] packages = [ - {include = "cli.py", from= "."}, + { include = "cli.py", from = "." }, { include = "app" }, { include = "app/**/*.py" }, ] @@ -24,32 +22,32 @@ Changelog = "https://github.com/geobeyond/fastgeoapi/releases" python = ">=3.9,<4.0" mangum = "^0.14.1" loguru = "^0.7.2" -jinja2 = "3.1.3" fastapi-opa = "^1.4.8" -rasterio = "1.3.9" # fix https://github.com/rasterio/rasterio/issues/2333 -pygeoapi = {git = "https://github.com/geopython/pygeoapi", rev = "master"} -uvicorn = {extras = ["standard"], version = "^0.25.0"} -fastapi = {extras = ["all"], version = "^0.108"} -typer = {extras = ["all"], version = "^0.9.0"} +rasterio = "1.3.9" # fix https://github.com/rasterio/rasterio/issues/2333 +pygeoapi = { git = "https://github.com/geopython/pygeoapi", rev = "master" } +uvicorn = { extras = ["standard"], version = "^0.25.0" } +fastapi = { extras = ["all"], version = "^0.109" } +typer = { extras = ["all"], version = "^0.9.0" } fastapi-key-auth = "^0.12.0" sqlalchemy = "^1.4.50" -geoalchemy2 = "^0.12.5" +geoalchemy2 = "^0.14.4" shapely = "<2.0" psycopg2 = "^2.9.7" openapi-pydantic = "^0.4.0" -pygeofilter = {git = "https://github.com/geopython/pygeofilter", rev = "main"} +pygeofilter = { git = "https://github.com/geopython/pygeofilter", rev = "main" } pydantic-settings = "^2.1.0" authlib = "^1.3.0" cachetools = "^5.3.2" +json-ref-dict = "^0.7.2" [tool.poetry.scripts] fastgeoapi = "cli:app" [tool.poetry.group.dev.dependencies] pytest = "^7.4.0" -coverage = {extras = ["toml"], version = "^6.5.0"} +coverage = { extras = ["toml"], version = "^6.5.0" } typeguard = "^2.13.3" -xdoctest = {extras = ["colors"], version = "^0.15.10"} +xdoctest = { extras = ["colors"], version = "^0.15.10" } # datamodel-code-generator = {extras = ["http"], version = "^0.22.1"} pre-commit = 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test = ["hypothesis", "pytest"] +[[package]] +name = "soupsieve" +version = "2.4.1" +description = "A modern CSS selector implementation for Beautiful Soup." +optional = false +python-versions = ">=3.7" +files = [ + {file = "soupsieve-2.4.1-py3-none-any.whl", hash = "sha256:1c1bfee6819544a3447586c889157365a27e10d88cde3ad3da0cf0ddf646feb8"}, + {file = "soupsieve-2.4.1.tar.gz", hash = "sha256:89d12b2d5dfcd2c9e8c22326da9d9aa9cb3dfab0a83a024f05704076ee8d35ea"}, +] + [[package]] name = "sqlalchemy" version = "1.4.51" From 5d1699d51875c1f0d97278d8d472bad466569866 Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Fri, 25 Aug 2023 15:53:46 +0200 Subject: [PATCH 29/33] fix(pyproject.toml): Fix backend dependency for pygeofilter --- poetry.lock | 14 ++++++++++++++ 1 file changed, 14 insertions(+) diff --git a/poetry.lock b/poetry.lock index 6f05c6f..b1b886e 100644 --- a/poetry.lock +++ b/poetry.lock @@ -73,6 +73,20 @@ files = [ [package.extras] test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] +[[package]] +name = "argcomplete" +version = "3.1.1" +description = "Bash tab completion for argparse" +optional = false +python-versions = ">=3.6" +files = [ + {file = "argcomplete-3.1.1-py3-none-any.whl", hash = "sha256:35fa893a88deea85ea7b20d241100e64516d6af6d7b0ae2bed1d263d26f70948"}, + {file = "argcomplete-3.1.1.tar.gz", hash = "sha256:6c4c563f14f01440aaffa3eae13441c5db2357b5eec639abe7c0b15334627dff"}, +] + +[package.extras] +test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] + [[package]] name = "asttokens" version = "2.4.1" From bbeb5de4b8ff3796b7536aae058376ba155f9f6c Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Tue, 3 Oct 2023 16:45:20 +0200 Subject: [PATCH 30/33] Fix base url in pygeoapi configuration --- pygeoapi-openapi.yml | 368 ++++++++++++++++++++++++------------------- 1 file changed, 206 insertions(+), 162 deletions(-) diff --git a/pygeoapi-openapi.yml b/pygeoapi-openapi.yml index 5577241..45df001 100644 --- a/pygeoapi-openapi.yml +++ b/pygeoapi-openapi.yml @@ -48,8 +48,7 @@ components: type: string style: form f: - description: - The optional f parameter indicates the output format which the + description: The optional f parameter indicates the output format which the server shall provide as part of the response document. The default format is GeoJSON. explode: false @@ -59,14 +58,13 @@ components: schema: default: json enum: - - json - - html - - jsonld + - json + - html + - jsonld type: string style: form lang: - description: - The optional lang parameter instructs the server return a response + description: The optional lang parameter instructs the server return a response in a certain language, if supported. If the language is not among the available values, the Accept-Language header language will be used if it is supported. If the header is missing, the default server language is used. Note that providers @@ -80,12 +78,11 @@ components: schema: default: en-US enum: - - en-US - - fr-CA + - en-US + - fr-CA type: string offset: - description: - The optional offset parameter indicates the index within the result + description: The optional offset parameter indicates the index within the result set from which the server shall begin presenting results in the response document. The first element has an index of 0 (default). explode: false @@ -98,8 +95,7 @@ components: type: integer style: form properties: - description: - The properties that should be included for each feature. The parameter + description: The properties that should be included for each feature. The parameter value is a comma-separated list of property names. explode: false in: query @@ -129,7 +125,7 @@ components: type: object style: form responses: - "200": + '200': description: successful operation "204": description: no content @@ -137,7 +133,7 @@ components: content: application/json: schema: - $ref: "#/components/schemas/queryables" + $ref: '#/components/schemas/queryables' description: successful queryables operation default: content: @@ -153,7 +149,7 @@ components: type: string language: default: - - en + - en description: the language used for the title and description type: string queryable: @@ -170,17 +166,17 @@ components: format: url type: string required: - - queryable - - type + - queryable + - type type: object queryables: properties: queryables: items: - $ref: "#/components/schemas/queryable" + $ref: '#/components/schemas/queryable' type: array required: - - queryables + - queryables type: object info: contact: @@ -195,9 +191,9 @@ info: title: pygeoapi default instance version: 0.16.dev0 x-keywords: - - geospatial - - data - - api + - geospatial + - data + - api openapi: 3.0.2 paths: /: @@ -205,75 +201,113 @@ paths: description: Landing page operationId: getLandingPage parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Landing page tags: - - server + - server /collections: get: description: Collections operationId: getCollections parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Collections tags: - - server + - server /collections/lakes: get: description: lakes of the world, public domain operationId: describeLakesCollection parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Collection - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes metadata tags: - - lakes + - lakes /collections/lakes/items: get: description: lakes of the world, public domain operationId: getLakesFeatures parameters: - - &id001 - description: - The optional f parameter indicates the output format which the - server shall provide as part of the response document. The default format - is GeoJSON. - explode: false - in: query - name: f - required: false - schema: - default: json + - &id001 + description: The optional f parameter indicates the output format which the + server shall provide as part of the response document. The default format + is GeoJSON. + explode: false + in: query + name: f + required: false + schema: + default: json + enum: + - json + - html + - jsonld + - csv + type: string + style: form + - &id002 + description: The optional lang parameter instructs the server return a response + in a certain language, if supported. If the language is not among the available + values, the Accept-Language header language will be used if it is supported. + If the header is missing, the default server language is used. Note that + providers may only support a single language (or often no language at all), + that can be different from the server language. Language strings can be + written in a complex (e.g. "fr-CA,fr;q=0.9,en-US;q=0.8,en;q=0.7"), simple + (e.g. "de") or locale-like (e.g. "de-CH" or "fr_BE") fashion. + in: query + name: lang + required: false + schema: + default: en-US + enum: + - en-US + - fr-CA + type: string + - $ref: '#/components/parameters/bbox' + - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/limit + - $ref: '#/components/parameters/crs' + - $ref: '#/components/parameters/bbox-crs' + - description: The properties that should be included for each feature. The + parameter value is a comma-separated list of property names. + explode: false + in: query + name: properties + required: false + schema: + items: enum: - - json - - html - - jsonld - - csv + - id + - scalerank + - name + - name_alt + - admin + - featureclass type: string style: form - &id002 @@ -365,13 +399,13 @@ paths: type: string style: form responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Features - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes items tags: @@ -394,13 +428,13 @@ paths: - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Feature - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes item by id tags: @@ -420,39 +454,39 @@ paths: description: lakes of the world, public domain operationId: getLakesQueryables parameters: - - *id001 - - *id002 + - *id001 + - *id002 responses: - "200": - $ref: "#/components/responses/Queryables" - "400": + '200': + $ref: '#/components/responses/Queryables' + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes queryables tags: - - lakes + - lakes /collections/obs: get: description: My cool observations operationId: describeObsCollection parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Collection - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations metadata tags: - - obs + - obs /collections/obs/items: get: description: My cool observations @@ -491,36 +525,48 @@ paths: required: false schema: type: string - style: form - - explode: false - in: query - name: stn_id - required: false - schema: - type: integer - style: form - - explode: false - in: query - name: datetime - required: false - schema: - type: string - style: form - - explode: false - in: query - name: value - required: false - schema: - type: number - style: form + type: array + style: form + - $ref: '#/components/parameters/vendorSpecificParameters' + - $ref: '#/components/parameters/skipGeometry' + - $ref: https://raw.githubusercontent.com/opengeospatial/ogcapi-records/master/core/openapi/parameters/sortby.yaml + - $ref: '#/components/parameters/offset' + - explode: false + in: query + name: id + required: false + schema: + type: string + style: form + - explode: false + in: query + name: stn_id + required: false + schema: + type: integer + style: form + - explode: false + in: query + name: datetime + required: false + schema: + type: string + style: form + - explode: false + in: query + name: value + required: false + schema: + type: number + style: form responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Features - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations items tags: @@ -543,13 +589,13 @@ paths: - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Feature - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations item by id tags: @@ -569,33 +615,33 @@ paths: description: My cool observations operationId: getObsQueryables parameters: - - *id001 - - *id002 + - *id001 + - *id002 responses: - "200": - $ref: "#/components/responses/Queryables" - "400": + '200': + $ref: '#/components/responses/Queryables' + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations queryables tags: - - obs + - obs /conformance: get: description: API conformance definition operationId: getConformanceDeclaration parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - "400": + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: API conformance definition tags: @@ -674,65 +720,63 @@ paths: description: This document operationId: getOpenapi parameters: - - $ref: "#/components/parameters/f" - - $ref: "#/components/parameters/lang" - - description: UI to render the OpenAPI document - explode: false - in: query - name: ui - required: false - schema: - default: swagger - enum: - - swagger - - redoc - type: string - style: form + - $ref: '#/components/parameters/f' + - $ref: '#/components/parameters/lang' + - description: UI to render the OpenAPI document + explode: false + in: query + name: ui + required: false + schema: + default: swagger + enum: + - swagger + - redoc + type: string + style: form responses: - "200": - $ref: "#/components/responses/200" - "400": + '200': + $ref: '#/components/responses/200' + '400': $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter default: - $ref: "#/components/responses/default" + $ref: '#/components/responses/default' summary: This document tags: - - server + - server /processes: get: description: Processes operationId: getProcesses parameters: - - $ref: "#/components/parameters/f" + - $ref: '#/components/parameters/f' responses: - "200": + '200': $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ProcessList.yaml default: - $ref: "#/components/responses/default" + $ref: '#/components/responses/default' summary: Processes tags: - - server + - server /processes/hello-world: get: - description: - An example process that takes a name as input, and echoes it back + description: An example process that takes a name as input, and echoes it back as output. Intended to demonstrate a simple process with a single literal input. operationId: describeHello-worldProcess parameters: - - $ref: "#/components/parameters/f" + - $ref: '#/components/parameters/f' responses: - "200": - $ref: "#/components/responses/200" + '200': + $ref: '#/components/responses/200' default: - $ref: "#/components/responses/default" + $ref: '#/components/responses/default' summary: Get process metadata tags: - - hello-world + - hello-world /processes/hello-world/execution: post: - description: - An example process that takes a name as input, and echoes it back + description: An example process that takes a name as input, and echoes it back as output. Intended to demonstrate a simple process with a single literal input. operationId: executeHello-worldJob @@ -748,19 +792,19 @@ paths: description: Mandatory execute request JSON required: true responses: - "200": - $ref: "#/components/responses/200" - "201": + '200': + $ref: '#/components/responses/200' + '201': $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ExecuteAsync.yaml - "404": + '404': $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/NotFound.yaml - "500": + '500': $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ServerError.yaml default: - $ref: "#/components/responses/default" + $ref: '#/components/responses/default' summary: Process Hello World execution tags: - - hello-world + - hello-world servers: - description: pygeoapi provides an API to geospatial data url: http://localhost:5000/geoapi From 33f4bae1b9b31f9d362611e4e5d3928a9655d78c Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Tue, 3 Oct 2023 20:14:24 +0200 Subject: [PATCH 31/33] Update to pydantic v2 --- poetry.lock | 170 +------------------- pygeoapi-openapi.yml | 368 +++++++++++++++++++------------------------ 2 files changed, 166 insertions(+), 372 deletions(-) diff --git a/poetry.lock b/poetry.lock index b1b886e..42c988d 100644 --- a/poetry.lock +++ b/poetry.lock @@ -75,13 +75,13 @@ test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] [[package]] name = "argcomplete" -version = "3.1.1" +version = "3.1.2" description = "Bash tab completion for argparse" optional = false python-versions = ">=3.6" files = [ - 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The default format is GeoJSON. explode: false @@ -58,13 +59,14 @@ components: schema: default: json enum: - - json - - html - - jsonld + - json + - html + - jsonld type: string style: form lang: - description: The optional lang parameter instructs the server return a response + description: + The optional lang parameter instructs the server return a response in a certain language, if supported. If the language is not among the available values, the Accept-Language header language will be used if it is supported. If the header is missing, the default server language is used. Note that providers @@ -78,11 +80,12 @@ components: schema: default: en-US enum: - - en-US - - fr-CA + - en-US + - fr-CA type: string offset: - description: The optional offset parameter indicates the index within the result + description: + The optional offset parameter indicates the index within the result set from which the server shall begin presenting results in the response document. The first element has an index of 0 (default). explode: false @@ -95,7 +98,8 @@ components: type: integer style: form properties: - description: The properties that should be included for each feature. The parameter + description: + The properties that should be included for each feature. The parameter value is a comma-separated list of property names. explode: false in: query @@ -125,7 +129,7 @@ components: type: object style: form responses: - '200': + "200": description: successful operation "204": description: no content @@ -133,7 +137,7 @@ components: content: application/json: schema: - $ref: '#/components/schemas/queryables' + $ref: "#/components/schemas/queryables" description: successful queryables operation default: content: @@ -149,7 +153,7 @@ components: type: string language: default: - - en + - en description: the language used for the title and description type: string queryable: @@ -166,17 +170,17 @@ components: format: url type: string required: - - queryable - - type + - queryable + - type type: object queryables: properties: queryables: items: - $ref: '#/components/schemas/queryable' + $ref: "#/components/schemas/queryable" type: array required: - - queryables + - queryables type: object info: contact: @@ -191,9 +195,9 @@ info: title: pygeoapi default instance version: 0.16.dev0 x-keywords: - - geospatial - - data - - api + - geospatial + - data + - api openapi: 3.0.2 paths: /: @@ -201,113 +205,75 @@ paths: description: Landing page operationId: getLandingPage parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Landing page tags: - - server + - server /collections: get: description: Collections operationId: getCollections parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Collections tags: - - server + - server /collections/lakes: get: description: lakes of the world, public domain operationId: describeLakesCollection parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Collection - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes metadata tags: - - lakes + - lakes /collections/lakes/items: get: description: lakes of the world, public domain operationId: getLakesFeatures parameters: - - &id001 - description: The optional f parameter indicates the output format which the - server shall provide as part of the response document. The default format - is GeoJSON. - explode: false - in: query - name: f - required: false - schema: - default: json - enum: - - json - - html - - jsonld - - csv - type: string - style: form - - &id002 - description: The optional lang parameter instructs the server return a response - in a certain language, if supported. If the language is not among the available - values, the Accept-Language header language will be used if it is supported. - If the header is missing, the default server language is used. Note that - providers may only support a single language (or often no language at all), - that can be different from the server language. Language strings can be - written in a complex (e.g. "fr-CA,fr;q=0.9,en-US;q=0.8,en;q=0.7"), simple - (e.g. "de") or locale-like (e.g. "de-CH" or "fr_BE") fashion. - in: query - name: lang - required: false - schema: - default: en-US - enum: - - en-US - - fr-CA - type: string - - $ref: '#/components/parameters/bbox' - - $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/parameters/limit - - $ref: '#/components/parameters/crs' - - $ref: '#/components/parameters/bbox-crs' - - description: The properties that should be included for each feature. The - parameter value is a comma-separated list of property names. - explode: false - in: query - name: properties - required: false - schema: - items: + - &id001 + description: + The optional f parameter indicates the output format which the + server shall provide as part of the response document. The default format + is GeoJSON. + explode: false + in: query + name: f + required: false + schema: + default: json enum: - - id - - scalerank - - name - - name_alt - - admin - - featureclass + - json + - html + - jsonld + - csv type: string style: form - &id002 @@ -399,13 +365,13 @@ paths: type: string style: form responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Features - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes items tags: @@ -428,13 +394,13 @@ paths: - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Feature - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes item by id tags: @@ -454,39 +420,39 @@ paths: description: lakes of the world, public domain operationId: getLakesQueryables parameters: - - *id001 - - *id002 + - *id001 + - *id002 responses: - '200': - $ref: '#/components/responses/Queryables' - '400': + "200": + $ref: "#/components/responses/Queryables" + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Large Lakes queryables tags: - - lakes + - lakes /collections/obs: get: description: My cool observations operationId: describeObsCollection parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Collection - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations metadata tags: - - obs + - obs /collections/obs/items: get: description: My cool observations @@ -525,48 +491,36 @@ paths: required: false schema: type: string - type: array - style: form - - $ref: '#/components/parameters/vendorSpecificParameters' - - $ref: '#/components/parameters/skipGeometry' - - $ref: https://raw.githubusercontent.com/opengeospatial/ogcapi-records/master/core/openapi/parameters/sortby.yaml - - $ref: '#/components/parameters/offset' - - explode: false - in: query - name: id - required: false - schema: - type: string - style: form - - explode: false - in: query - name: stn_id - required: false - schema: - type: integer - style: form - - explode: false - in: query - name: datetime - required: false - schema: - type: string - style: form - - explode: false - in: query - name: value - required: false - schema: - type: number - style: form + style: form + - explode: false + in: query + name: stn_id + required: false + schema: + type: integer + style: form + - explode: false + in: query + name: datetime + required: false + schema: + type: string + style: form + - explode: false + in: query + name: value + required: false + schema: + type: number + style: form responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Features - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations items tags: @@ -589,13 +543,13 @@ paths: - $ref: "#/components/parameters/f" - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/Feature - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations item by id tags: @@ -615,33 +569,33 @@ paths: description: My cool observations operationId: getObsQueryables parameters: - - *id001 - - *id002 + - *id001 + - *id002 responses: - '200': - $ref: '#/components/responses/Queryables' - '400': + "200": + $ref: "#/components/responses/Queryables" + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/NotFound - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: Get Observations queryables tags: - - obs + - obs /conformance: get: description: API conformance definition operationId: getConformanceDeclaration parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/LandingPage - '400': + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/ServerError summary: API conformance definition tags: @@ -720,63 +674,65 @@ paths: description: This document operationId: getOpenapi parameters: - - $ref: '#/components/parameters/f' - - $ref: '#/components/parameters/lang' - - description: UI to render the OpenAPI document - explode: false - in: query - name: ui - required: false - schema: - default: swagger - enum: - - swagger - - redoc - type: string - style: form + - $ref: "#/components/parameters/f" + - $ref: "#/components/parameters/lang" + - description: UI to render the OpenAPI document + explode: false + in: query + name: ui + required: false + schema: + default: swagger + enum: + - swagger + - redoc + type: string + style: form responses: - '200': - $ref: '#/components/responses/200' - '400': + "200": + $ref: "#/components/responses/200" + "400": $ref: https://schemas.opengis.net/ogcapi/features/part1/1.0/openapi/ogcapi-features-1.yaml#/components/responses/InvalidParameter default: - $ref: '#/components/responses/default' + $ref: "#/components/responses/default" summary: This document tags: - - server + - server /processes: get: description: Processes operationId: getProcesses parameters: - - $ref: '#/components/parameters/f' + - $ref: "#/components/parameters/f" responses: - '200': + "200": $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ProcessList.yaml default: - $ref: '#/components/responses/default' + $ref: "#/components/responses/default" summary: Processes tags: - - server + - server /processes/hello-world: get: - description: An example process that takes a name as input, and echoes it back + description: + An example process that takes a name as input, and echoes it back as output. Intended to demonstrate a simple process with a single literal input. operationId: describeHello-worldProcess parameters: - - $ref: '#/components/parameters/f' + - $ref: "#/components/parameters/f" responses: - '200': - $ref: '#/components/responses/200' + "200": + $ref: "#/components/responses/200" default: - $ref: '#/components/responses/default' + $ref: "#/components/responses/default" summary: Get process metadata tags: - - hello-world + - hello-world /processes/hello-world/execution: post: - description: An example process that takes a name as input, and echoes it back + description: + An example process that takes a name as input, and echoes it back as output. Intended to demonstrate a simple process with a single literal input. operationId: executeHello-worldJob @@ -792,19 +748,19 @@ paths: description: Mandatory execute request JSON required: true responses: - '200': - $ref: '#/components/responses/200' - '201': + "200": + $ref: "#/components/responses/200" + "201": $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ExecuteAsync.yaml - '404': + "404": $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/NotFound.yaml - '500': + "500": $ref: https://schemas.opengis.net/ogcapi/processes/part1/1.0/openapi/responses/ServerError.yaml default: - $ref: '#/components/responses/default' + $ref: "#/components/responses/default" summary: Process Hello World execution tags: - - hello-world + - hello-world servers: - description: pygeoapi provides an API to geospatial data url: http://localhost:5000/geoapi From 37976a3280d8d6d5e5bc1937e4873a50b545fb1a Mon Sep 17 00:00:00 2001 From: Francesco Bartoli Date: Tue, 26 Dec 2023 00:50:51 +0100 Subject: [PATCH 32/33] Update dependencies --- poetry.lock | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/poetry.lock b/poetry.lock index 42c988d..e0018ea 100644 --- a/poetry.lock +++ b/poetry.lock @@ -75,13 +75,13 @@ test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] [[package]] name = "argcomplete" -version = "3.1.2" +version = "3.1.6" description = "Bash tab completion for argparse" optional = false -python-versions = ">=3.6" +python-versions = ">=3.8" files = [ - {file = "argcomplete-3.1.2-py3-none-any.whl", hash = "sha256:d97c036d12a752d1079f190bc1521c545b941fda89ad85d15afa909b4d1b9a99"}, - {file = "argcomplete-3.1.2.tar.gz", hash = "sha256:d5d1e5efd41435260b8f85673b74ea2e883affcbec9f4230c582689e8e78251b"}, + {file = "argcomplete-3.1.6-py3-none-any.whl", hash = "sha256:71f4683bc9e6b0be85f2b2c1224c47680f210903e23512cfebfe5a41edfd883a"}, + {file = "argcomplete-3.1.6.tar.gz", hash = "sha256:3b1f07d133332547a53c79437527c00be48cca3807b1d4ca5cab1b26313386a6"}, ] [package.extras] From 53fd0d7fc3ea6e90e579334466c654f36b570407 Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Tue, 26 Dec 2023 18:30:04 +0000 Subject: [PATCH 33/33] Bump actions/setup-python from 4.7.0 to 5.0.0 Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4.7.0 to 5.0.0. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](https://github.com/actions/setup-python/compare/v4.7.0...v5.0.0) --- updated-dependencies: - dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] --- .github/workflows/release.yml | 2 +- .github/workflows/tests.yml | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index a3d4fdb..93f1b7d 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -17,7 +17,7 @@ jobs: fetch-depth: 2 - name: Set up Python - uses: actions/setup-python@v4.7.0 + uses: actions/setup-python@v5.0.0 with: python-version: "3.10" diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 1c643a0..62d2e5a 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -35,7 +35,7 @@ jobs: uses: actions/checkout@v4.1.1 - name: Set up Python ${{ matrix.python }} - uses: actions/setup-python@v4.7.0 + uses: actions/setup-python@v5.0.0 with: python-version: ${{ matrix.python }} @@ -120,7 +120,7 @@ jobs: uses: actions/checkout@v4.1.1 - name: Set up Python - uses: actions/setup-python@v4.7.0 + uses: actions/setup-python@v5.0.0 with: python-version: "3.10"