The model is not running correctly.

[crystal00028]

Your name

crystal

Your affiliation

hzue

What happened? What did you expect to happen?

./gcclassic | tee GC.log
The model is not running correctly.

What are the steps to reproduce the bug?

Program received signal SIGSEGV: Segmentation fault - invalid memory reference.

Backtrace for this error:

Program received signal SIGSEGV: Segmentation fault - invalid memory reference.

Backtrace for this error:
#0 0x7f44906e0d11 in ???
#0 0x7f44906e0d11 in ???
#1 0x7f44906dfee5 in ???
#1 0x7f44906dfee5 in ???
#2 0x7f449030308f in ???
at /build/glibc-LcI20x/glibc-2.31/signal/../sysdeps/unix/sysv/linux/x86_64/sigaction.c:0
#2 0x7f449030308f in ???
at /build/glibc-LcI20x/glibc-2.31/signal/../sysdeps/unix/sysv/linux/x86_64/sigaction.c:0
#3 0x7f449044bd71 in ???
#3 0x7f449044bd71 in ???
at ../sysdeps/x86_64/multiarch/memset-vec-unaligned-erms.S:151
at ../sysdeps/x86_64/multiarch/memset-vec-unaligned-erms.S:151
#4 0x7f4491001e17 in opmie
#4 0x7f4490ffba8a in gen_id
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/Cloud-J/src/Core/cldj_fjx_sub_mod.F90:928
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/Cloud-J/src/Core/cldj_fjx_sub_mod.F90:1609
#5 0x7f449100fbd0 in __cldj_fjx_sub_mod_MOD_photo_jx
#5 0x7f4491005e1d in blkslv
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/Cloud-J/src/Core/cldj_fjx_sub_mod.F90:521
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/Cloud-J/src/Core/cldj_fjx_sub_mod.F90:1321
#6 0x7f4491005e1d in miesct
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/Cloud-J/src/Core/cldj_fjx_sub_mod.F90:1253
#7 0x7f4491005e1d in opmie
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/Cloud-J/src/Core/cldj_fjx_sub_mod.F90:1157
#8 0x7f449100fbd0 in __cldj_fjx_sub_mod_MOD_photo_jx
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/Cloud-J/src/Core/cldj_fjx_sub_mod.F90:521
#6 0x7f4490ff06ae in __cldj_sub_mod_MOD_cloud_jx
#9 0x7f4490ff06ae in __cldj_sub_mod_MOD_cloud_jx
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/Cloud-J/src/Core/cldj_sub_mod.F90:225
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/Cloud-J/src/Core/cldj_sub_mod.F90:225
#7 0x7f4490d097a2 in __cldj_interface_mod_MOD_run_cloudj._omp_fn.0
#10 0x7f4490d097a2 in __cldj_interface_mod_MOD_run_cloudj._omp_fn.0
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/GEOS-Chem/GeosCore/cldj_interface_mod.F90:948
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/GEOS-Chem/GeosCore/cldj_interface_mod.F90:948
#8 0x7f44905028e5 in ???
#11 0x7f449050a86d in ???
#9 0x7f4490d0f14b in __cldj_interface_mod_MOD_run_cloudj
at /home/cry/gc_4x5_merra2_fullchem/CodeDir/src/GEOS-Chem/GeosCore/cldj_interface_mod.F90:439
#12 0x7f449006c608 in start_thread
at /build/glibc-LcI20x/glibc-2.31/nptl/pthread_create.c:477
#13 0x7f44903df352 in ???
at ../sysdeps/unix/sysv/linux/x86_64/clone.S:95
#14 0xffffffffffffffff in ???

Please attach any relevant configuration and log files.

HEMCO_Config.txt
GC.log
geoschem_config.txt
HEMCO_Diagn.txt
HISTORY.txt

What GEOS-Chem version were you using?

14.5.0

What environment were you running GEOS-Chem on?

Other (please explain below)

What compiler and version were you using?

11.2.0

Will you be addressing this bug yourself?

Yes

In what configuration were you running GEOS-Chem?

GCClassic

What simulation were you running?

Full chemistry

As what resolution were you running GEOS-Chem?

4*5

What meterology fields did you use?

MERRA-2

Additional information

No response