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original.xml
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<simulationDefinition>
<transferrer class="tmp" />
<algorithms />
<parameters>
<parameter name="SIMULATION_SCALING" value="0.001" type="float" />
<parameter name="RESOLUTION_FIELD_NEAR" value="3" type="float" />
<parameter name="RESOLUTION_FIELD_FAR" value="3" type="float" />
<parameter name="RESOLUTION_FIELD_ZONE" value="3" type="float" />
<parameter name="RESOLUTION_FIELD_NEEDLE_ZONE" value="2" type="float" />
<parameter name="CONSTANT_IRE_NEEDLEPAIR_VOLTAGE" value="[[1, 2, 3000], [1, 3, 2400], [2, 3, 3100]]" type="array(array(int, int, float))" />
<parameter name="CONSTANT_IRE_RELATIVE_PERMITTIVITY_NEEDLE" value="1.0" type="float" />
<parameter name="CONSTANT_IRE_RELATIVE_PERMITTIVITY_TISSUE" value="1.0" type="float" />
<parameter name="CONSTANT_IRE_RELATIVE_PERMITTIVITY_TUMOUR" value="1.0" type="float" />
<parameter name="CONSTANT_IRE_RELATIVE_PERMITTIVITY_BACKGROUND" value="1.0" type="float" />
<parameter name="CONSTANT_IRE_RELATIVE_PERMITTIVITY_VESSELS" value="1.0" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_NEEDLE" value="1e4" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_UPPER_TISSUE" value="0.32" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_UPPER_TUMOUR" value="0.7" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_UPPER_BACKGROUND" value="0.08" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_UPPER_VESSELS" value="1.5" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_LOWER_TISSUE" value="0.08" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_LOWER_TUMOUR" value="0.2" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_LOWER_BACKGROUND" value="0.02" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_LOWER_VESSELS" value="0.7" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_THRESHOLD_UPPER_TISSUE" value="70000" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_THRESHOLD_UPPER_TUMOUR" value="80000" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_THRESHOLD_UPPER_BACKGROUND" value="40000" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_THRESHOLD_UPPER_VESSELS" value="45000" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_THRESHOLD_LOWER_TISSUE" value="35000" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_THRESHOLD_LOWER_TUMOUR" value="40000" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_THRESHOLD_LOWER_BACKGROUND" value="10000" type="float" />
<parameter name="CONSTANT_IRE_ELECTRIC_CONDUCTIVITY_THRESHOLD_LOWER_VESSELS" value="10000" type="float" />
</parameters>
<numericalModel>
<needles>
<needle index="1" class="boundary" file="library:rfa-cylinder-1">
<parameters>
<parameter name="NEEDLE_TIP_LOCATION" value="[0.0, 14.0, 0.0]" type="array(float)" />
<parameter name="NEEDLE_ENTRY_LOCATION" value="[1.0, 14.0, 0.0]" type="array(float)" />
<parameter name="NEEDLE_ACTIVE_LENGTH" value="20.0" type="array(float)" />
</parameters>
</needle>
<needle index="2" class="boundary" file="library:rfa-cylinder-1">
<parameters>
<parameter name="NEEDLE_TIP_LOCATION" value="[0.0, 0.0, 0.0]" type="array(float)" />
<parameter name="NEEDLE_ENTRY_LOCATION" value="[1.0, 0.0, 0.0]" type="array(float)" />
<parameter name="NEEDLE_ACTIVE_LENGTH" value="20.0" type="array(float)" />
</parameters>
</needle>
<needle index="3" class="boundary" file="library:rfa-cylinder-1">
<parameters>
<parameter name="NEEDLE_TIP_LOCATION" value="[0.0, 7.0, 10.0]" type="array(float)" />
<parameter name="NEEDLE_ENTRY_LOCATION" value="[1.0, 7.0, 10.0]" type="array(float)" />
<parameter name="NEEDLE_ACTIVE_LENGTH" value="20.0" type="array(float)" />
</parameters>
</needle>
</needles>
<regions>
<region id="organ-1" name="organ" format="surface" input="organ.stl" groups='["organs", "boundaries"]' />
<region id="tumour-1" name="tumour" format="surface" input="tumour.stl" groups='["tumours"]' />
<region id="vessel-1" name="vessel-straight" format="surface" input="vessel1.stl" groups='["vessels"]' />
<region id="vessel-2" name="vessel-round" format="surface" input="vessel2.stl" groups='["vessels"]' />
</regions>
<definition family="fenics">
</definition>
</numericalModel>
</simulationDefinition>