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Is there a way to get per-residue embeddings from the model? #70

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GUMI-QXP opened this issue Nov 18, 2024 · 2 comments
Open

Is there a way to get per-residue embeddings from the model? #70

GUMI-QXP opened this issue Nov 18, 2024 · 2 comments
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enhancement New feature or request question Further information is requested

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@GUMI-QXP
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Is there a way to get per-residue embeddings from the model?
@Augustin-Zidek Augustin-Zidek added question Further information is requested enhancement New feature or request labels Nov 18, 2024
@GUMI-QXP
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Is it possible to obtain the last activation values using alphafold3?

Something like esm allows with the model.forward method . return the final representations/embedding

@sky1ove
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sky1ove commented Nov 25, 2024

Looking forward for this feature

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@Augustin-Zidek @sky1ove @GUMI-QXP