Using FUSION with R 3.6.1

[carbocation]

Since upgrading to R 3.6.1, I have been using the following packages to get FUSION to run for me. This may work for others as a stopgap until the packages upgrade on CRAN. Of note, plink2R sounds as though they don't plan to support R 3.6.1, though I have opened a pull request with the trivial changes needed to fix the issue. (Also noted under #13 .)

plink2R: devtools::install_github("carbocation/plink2R/plink2R", ref="carbocation-permit-r361")

optparse: remotes::install_github("trevorld/r-optparse")

coloc: devtools::install_github("chr1swallace/coloc")

[complexgenome]

Hi, thanks for this.

I'm on R-4.0 (windows 10) trying to install plink2R but facing issues.

devtools::install_github("carbocation/plink2R/plink2R", ref="carbocation-permit-r361")

How is this on your side?