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Hi,
I would like to use germline. I am using 1.5.3 version, this is my command line
./germline-1-5-3/bin/germline -homoz -err_het 1 -err_hom 2 -min_m 2.5 -input myfile.ped myfile.map -output myfile.out > > test.log 2> test.err
A .match file was generated but the process ended with Segmentation fault (core dumped) and the output seems incomplete.
Segmentation fault (core dumped)
I also tried a simple test with data in the test folder
./bin/germline -input ./test/CEU.22.ped ./test/CEU.22.map -output ./test/mytest > ./test/mytest.log 2> ./test/mytest.err
it ended with
Exit 1
In both cases no errors are shown in my log and err files. Could you please help me?
Thanks. Best, Maria Angela
The text was updated successfully, but these errors were encountered:
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Hi,
I would like to use germline.
I am using 1.5.3 version, this is my command line
./germline-1-5-3/bin/germline -homoz -err_het 1 -err_hom 2 -min_m 2.5 -input myfile.ped myfile.map -output myfile.out > > test.log 2> test.err
A .match file was generated but the process ended with
Segmentation fault (core dumped)
and the output seems incomplete.I also tried a simple test with data in the test folder
./bin/germline -input ./test/CEU.22.ped ./test/CEU.22.map -output ./test/mytest > ./test/mytest.log 2> ./test/mytest.err
it ended with
Exit 1
In both cases no errors are shown in my log and err files.
Could you please help me?
Thanks.
Best,
Maria Angela
The text was updated successfully, but these errors were encountered: